Lsi08G005550 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G005550
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Tubby-like F-box protein
Location	chr08: 13741039 .. 13743853 (+)
RNA-Seq Expression	Lsi08G005550
Synteny	Lsi08G005550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCGGGTCATTCTTCAAGCGCCTTTTTGTTTGTACTCTCTCCTCAAAGATACATTAACACGACTAGGCCTTTTGTAAAACCGGTTAAATGTCATTCCGTAGCATACTTCGTGATGTGAGGGATGGATTTGGAAGCTTATCAAGGCGTAGTTTTGAGGTGAGGCTGTCTGGACATTCCAGGGGTAAATCTCATGGACCAGTTCATGAGTTTAATGATGAGCCTCTGCTAATTCAGACTAGCCGTTGGGCTAGCCTTCCACCCGAATTATTATGTGATGTGGTCCGAAGACTGGAGGCGAGTGAGAATACTTGGCCTTCTCGGAGAAATGTTGTTGCTTGTGCTGCTGTATGTAGGTCATGGAGGGACATGTGCAAAGAAATGGTCAAAAGCCCTGAGTTGTCTGGGAAAATTACCTTCCCGATCGCCTTGAAGCAGGTGGGTACATGCTTTTCTTTTTAATAGCCATGAAGCACATTTTGTATGGAATAACTATTCTGTTTGTGTAGTTCACACTCTTTTAGTTGGCTTTTATATATGGATGTACATATATGTACAATGAAGGCTAATTTTTAAAAGCACTATGCCATTCGACATTCACTCTAGGACAAGGAATTGTTTACAATGATTGTGGATTTACTCTGTCTTGGTCGTGCTTGGTCTATTCGTATCTGCTTGACTGCTTAATGACTATGTGGTGGCCTACTCTATTATATAGCTTAACCGTGCTTATATGCACTTTTTTTTTTTTCTTTGCAGCCTGGGCCGCGTGATGGCACTATTCAATGCTTTATCAAGAGGAACAAATCTAATTTAACTTATCATCTTTATCTTTGCCTTAGTCCTGGTAAGCTCATTTTCTTAACTATGCAAAATTTATACGTAATGTAGCACGATAAAAGCAAATCTTTCTTTTAAGTTTTTTGTATTATTAGAGTCAACATTGTAATATGGAAGGTGGACTAAGGGGGTAGCCTTCTGTGTTCTATCCCTTGGCTTAGCACGGTCACGGGGTAATATTGAAACAAAGCTTGAGCAAGCTGCTGGCAAGGCTCAAAATGAATTTTGCTTGTACGTTTGAAAAGAAACTAGCATTTCTGTAACGATGGTAACACGGTTGTGGAGAAGTGGCATGTCATCCTTCAATGAAAAGTTGAATGTTTATACTAATTTTGGCTGCACGTACTTTCGAAGTTTAACCACAAAAGTCAAAGCTCTAATATGAGAAATAAGTGGACTGATTTAAACATTTAAACTTCTGTTTTGTGAGCTTCATCATTGGCTTAACAAAAACCGACATATCTCACACAAGTTGCAATTAATTTAGCTTTCGATTACAATTTCCTTTAGTTGCTTTCCTTATTAGAACAAAGAAATTGCTTTATCTAGCGCTGGATATACTGATTTGAACACTAAACCATTGCAATAACCATGCAGCTTTACTTGTTGAAAATGGGAAATTTCTTCTTTCTGCAAAAAGAACCAGGAGAACTACTTCTACAGAGTATGTTATATCATTGGCTGCGGACGATATATCAAGATCGAGCAACGGTTATATAGGAAAGCTAAGGTATGCTTATGCTGAACTTTTAATCTCAAGTTTACTATGATCTTCTCTGCTATCAACATCTGATGCATTATTATGAACTGATGAGATTGCTGAACTATGATCATCATCACTCCACACAAATTTGTTGCAACAAAAGAAACAGATAAATTTCCACTTGGGAAAATGTAAATGAACTGTGGTTGGTTCTGTTTCAGATCAAATTTTCTGGGAACCAAGTTCATTATATATGATACACAGCCTCCTTACAACAGCAACCAAATTCCAACCCTTGGTCGAAGCCGAAGATTCTACTCCAAAAAGGTCTCACCGAAGGTCCCAGCTGGAAGCTACAGTATTGCACAAATTGCATACGAGTTGAATGTATTAGGTACGAGGGGGCCCCGGAGAATGAACTGCACCATGTACTCAATCCCCACTTCATCTCTTGAGCCAGGTTGCTCAGTTCCAGGCCAGCCCGAGCTCAATCCTCGCCCCCTTGAAGACTCATTTCGTAGCATCTCATTCTCCAAGTCGATCGATCGTTCCACCGAGTTCAGCAGTTCCCGCTTCTCTGATGTTGCAGGAATGCTTGTTGATGAAGATGGCGAGGTGAAGGATCGACCCTTGATTCTCCGGAACAAGGCACCTAGATGGCACGAGCAGTTGCAATGTTGGTGTCTCAATTTTCGTGGGAGGGTGACGGTTGCATCTGTAAAGAACTTTCAGTTGATTGCTGCAACCTCACCTGCTGCAGAAGCGCCTGTACCATCGCAGCCGCCTCCCCAACCCACGCAACCTACCCATTCTGACCACGACAAGATCATTCTTCAGTTTGGAAAGGTGGGTAAGGACATGTTTACGATGGATTATCGATACCCGCTGTCTGCATTCCAGGCATTTGCTATATGTCTGAGCAGCTTTGACACAAAATTGGCATGTGAATAGAGAAGAAGAAAGACAGGAAAGAGGAAAAAGAAGAAGAAATTCAGATAATGGTAAGAAATGAAGAAAAGAATTTATAGTTGGGAATTAGTGGTTTTCCTTAGTGTTTCTATAGGGTGATGTTTGAATGCAGTTTGATTGTATTAAATTAGAAACTCTCACTCACTGCAAAGAATTAGAACAATTTCTTTGAACCACACTCTCATCACTCATGGACCTCACCTTCTCTCTCTCTCTCTTTTATTTCATTAATTTTTTTTAATTTTTTTTATTTTTTATTTTTTATTTTTTATTATTAGTGTTATTTGAATGGCTTGTATA

mRNA sequence

ATGGATTTCGGGTCATTCTTCAAGCGCCTTTTTGTTTGTACTCTCTCCTCAAAGATACATTAACACGACTAGGCCTTTTGTAAAACCGGTTAAATGTCATTCCGTAGCATACTTCGTGATGTGAGGGATGGATTTGGAAGCTTATCAAGGCGTAGTTTTGAGGTGAGGCTGTCTGGACATTCCAGGGGTAAATCTCATGGACCAGTTCATGAGTTTAATGATGAGCCTCTGCTAATTCAGACTAGCCGTTGGGCTAGCCTTCCACCCGAATTATTATGTGATGTGGTCCGAAGACTGGAGGCGAGTGAGAATACTTGGCCTTCTCGGAGAAATGTTGTTGCTTGTGCTGCTGTATGTAGGTCATGGAGGGACATGTGCAAAGAAATGGTCAAAAGCCCTGAGTTGTCTGGGAAAATTACCTTCCCGATCGCCTTGAAGCAGCCTGGGCCGCGTGATGGCACTATTCAATGCTTTATCAAGAGGAACAAATCTAATTTAACTTATCATCTTTATCTTTGCCTTAGTCCTGCTTTACTTGTTGAAAATGGGAAATTTCTTCTTTCTGCAAAAAGAACCAGGAGAACTACTTCTACAGAGTATGTTATATCATTGGCTGCGGACGATATATCAAGATCGAGCAACGGTTATATAGGAAAGCTAAGATCAAATTTTCTGGGAACCAAGTTCATTATATATGATACACAGCCTCCTTACAACAGCAACCAAATTCCAACCCTTGGTCGAAGCCGAAGATTCTACTCCAAAAAGGTCTCACCGAAGGTCCCAGCTGGAAGCTACAGTATTGCACAAATTGCATACGAGTTGAATGTATTAGGTACGAGGGGGCCCCGGAGAATGAACTGCACCATGTACTCAATCCCCACTTCATCTCTTGAGCCAGGTTGCTCAGTTCCAGGCCAGCCCGAGCTCAATCCTCGCCCCCTTGAAGACTCATTTCGTAGCATCTCATTCTCCAAGTCGATCGATCGTTCCACCGAGTTCAGCAGTTCCCGCTTCTCTGATGTTGCAGGAATGCTTGTTGATGAAGATGGCGAGGTGAAGGATCGACCCTTGATTCTCCGGAACAAGGCACCTAGATGGCACGAGCAGTTGCAATGTTGGTGTCTCAATTTTCGTGGGAGGGTGACGGTTGCATCTGTAAAGAACTTTCAGTTGATTGCTGCAACCTCACCTGCTGCAGAAGCGCCTGTACCATCGCAGCCGCCTCCCCAACCCACGCAACCTACCCATTCTGACCACGACAAGATCATTCTTCAGTTTGGAAAGGTGGGTAAGGACATGTTTACGATGGATTATCGATACCCGCTGTCTGCATTCCAGGCATTTGCTATATGTCTGAGCAGCTTTGACACAAAATTGGCATGTGAATAGAGAAGAAGAAAGACAGGAAAGAGGAAAAAGAAGAAGAAATTCAGATAATGGTAAGAAATGAAGAAAAGAATTTATAGTTGGGAATTAGTGGTTTTCCTTAGTGTTTCTATAGGGTGATGTTTGAATGCAGTTTGATTGTATTAAATTAGAAACTCTCACTCACTGCAAAGAATTAGAACAATTTCTTTGAACCACACTCTCATCACTCATGGACCTCACCTTCTCTCTCTCTCTCTTTTATTTCATTAATTTTTTTTAATTTTTTTTATTTTTTATTTTTTATTTTTTATTATTAGTGTTATTTGAATGGCTTGTATA

Coding sequence (CDS)

ATGTCATTCCGTAGCATACTTCGTGATGTGAGGGATGGATTTGGAAGCTTATCAAGGCGTAGTTTTGAGGTGAGGCTGTCTGGACATTCCAGGGGTAAATCTCATGGACCAGTTCATGAGTTTAATGATGAGCCTCTGCTAATTCAGACTAGCCGTTGGGCTAGCCTTCCACCCGAATTATTATGTGATGTGGTCCGAAGACTGGAGGCGAGTGAGAATACTTGGCCTTCTCGGAGAAATGTTGTTGCTTGTGCTGCTGTATGTAGGTCATGGAGGGACATGTGCAAAGAAATGGTCAAAAGCCCTGAGTTGTCTGGGAAAATTACCTTCCCGATCGCCTTGAAGCAGCCTGGGCCGCGTGATGGCACTATTCAATGCTTTATCAAGAGGAACAAATCTAATTTAACTTATCATCTTTATCTTTGCCTTAGTCCTGCTTTACTTGTTGAAAATGGGAAATTTCTTCTTTCTGCAAAAAGAACCAGGAGAACTACTTCTACAGAGTATGTTATATCATTGGCTGCGGACGATATATCAAGATCGAGCAACGGTTATATAGGAAAGCTAAGATCAAATTTTCTGGGAACCAAGTTCATTATATATGATACACAGCCTCCTTACAACAGCAACCAAATTCCAACCCTTGGTCGAAGCCGAAGATTCTACTCCAAAAAGGTCTCACCGAAGGTCCCAGCTGGAAGCTACAGTATTGCACAAATTGCATACGAGTTGAATGTATTAGGTACGAGGGGGCCCCGGAGAATGAACTGCACCATGTACTCAATCCCCACTTCATCTCTTGAGCCAGGTTGCTCAGTTCCAGGCCAGCCCGAGCTCAATCCTCGCCCCCTTGAAGACTCATTTCGTAGCATCTCATTCTCCAAGTCGATCGATCGTTCCACCGAGTTCAGCAGTTCCCGCTTCTCTGATGTTGCAGGAATGCTTGTTGATGAAGATGGCGAGGTGAAGGATCGACCCTTGATTCTCCGGAACAAGGCACCTAGATGGCACGAGCAGTTGCAATGTTGGTGTCTCAATTTTCGTGGGAGGGTGACGGTTGCATCTGTAAAGAACTTTCAGTTGATTGCTGCAACCTCACCTGCTGCAGAAGCGCCTGTACCATCGCAGCCGCCTCCCCAACCCACGCAACCTACCCATTCTGACCACGACAAGATCATTCTTCAGTTTGGAAAGGTGGGTAAGGACATGTTTACGATGGATTATCGATACCCGCTGTCTGCATTCCAGGCATTTGCTATATGTCTGAGCAGCTTTGACACAAAATTGGCATGTGAATAG

Protein sequence

MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISRSSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRSTEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE

Homology

[Close]

BLAST of Lsi08G005550 vs. ExPASy Swiss-Prot
Match: Q75HX5 (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP8 PE=2 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 1.2e-180
Identity = 330/452 (73.01%), Postives = 373/452 (82.52%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVR------LSGHSRGKSHGPVHEFNDEPLLIQTSRWA 60
           MSFRSI+RDVRD FGSLSRRSFEV       L+GH RGKS   VHE  D  L+IQ SRWA
Sbjct: 1   MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA 60

Query: 61  SLPPELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIAL 120
           SLPPELL DV+RRLEASE+TWPSR++VV+CAAVC++WR+MCKE+V SPE  GK+TFP++L
Sbjct: 61  SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120

Query: 121 KQPGPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLA 180
           KQPGPRDG IQCFIKR+KS  TYHLYLCLS A+L ++GKFLLSAKR R+TT TEYVIS+ 
Sbjct: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180

Query: 181 ADDISRSSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGR-SRRFYSKKVSPKVPAG 240
           AD+ISRSS+ YIGKLRSNFLGTKFIIYDTQP YN   IP +GR SRRF SKKVSPK+P+G
Sbjct: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG 240

Query: 241 SYSIAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPE-LNPRPLEDSFRS-I 300
           SY+IAQ+ YELNVLGTRGPRRM+C M+SIP SS+EPG  VPGQPE + PR  E+SFRS  
Sbjct: 241 SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTT 300

Query: 301 SFSKS--IDRSTEFSSS------RFSDVAGMLV--DEDGEVKDRPLILRNKAPRWHEQLQ 360
           SFSKS  +DRS +FSSS      RFSD+AG  +  DE+G+ K+RPL+LRNKAPRWHEQLQ
Sbjct: 301 SFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQ 360

Query: 361 CWCLNFRGRVTVASVKNFQLIAA-TSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVG 420
           CWCLNFRGRVT+ASVKNFQLIAA   P A AP PSQP P        + DKIILQFGKV 
Sbjct: 361 CWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQPAP-------PEQDKIILQFGKVA 420

Query: 421 KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 433
           KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 421 KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445

[Close]

BLAST of Lsi08G005550 vs. ExPASy Swiss-Prot
Match: Q2QXB2 (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP14 PE=2 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 4.3e-178
Identity = 319/449 (71.05%), Postives = 364/449 (81.07%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPL------LIQTSRWA 60
           MSFRSI+RDVRDGFGSLSRR FEVRL GH RG+SH  VHE  D         ++Q+S WA
Sbjct: 1   MSFRSIVRDVRDGFGSLSRRGFEVRLVGHRRGRSHSAVHELRDGHAAAAAADVVQSSCWA 60

Query: 61  SLPPELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIAL 120
           +LPPELL DV+ RLEASE  WPSR+NVVACAAVCR+WRDMC+E+VK+PE  GKITFP++L
Sbjct: 61  NLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSL 120

Query: 121 KQPGPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLA 180
           KQPGPR+G IQCFIKR+KS  TY+LYLCLS A+LVE+GKFLLSAKR  R T TEY I ++
Sbjct: 121 KQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMS 180

Query: 181 ADDISRSSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGR-SRRFYSKKVSPKVPAG 240
           AD+ SRSSN YIGKLRSN LGTKF+IYDTQPP N+  +   G+ SRRFYS+KVSPK P+ 
Sbjct: 181 ADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKNPSS 240

Query: 241 SYSIAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPE-LNPRPLEDSFRSIS 300
           +YSIAQ++YELNVLGTRGPRRMNC M+SIP SSLE G +VP QP+ +  R L++SF SIS
Sbjct: 241 TYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDESFGSIS 300

Query: 301 FSKS--IDRSTEFSSSRFSD-------VAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCW 360
           FSKS  +DRS  FSSSR+SD       V G  + +  E K+RPLILRNKAPRWHEQLQCW
Sbjct: 301 FSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCW 360

Query: 361 CLNFRGRVTVASVKNFQLIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDM 420
           CLNF+GRVTVASVKNFQL+AAT PAA AP PSQP P P      DHDK+ILQFGKV KDM
Sbjct: 361 CLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPP----PDHDKVILQFGKVAKDM 420

Query: 421 FTMDYRYPLSAFQAFAICLSSFDTKLACE 433
           FTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 421 FTMDYRYPLSAFQAFAICLSSFDTKLACE 445

[Close]

BLAST of Lsi08G005550 vs. ExPASy Swiss-Prot
Match: Q9ZP59 (Tubby-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=TULP1 PE=1 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 1.4e-173
Identity = 328/458 (71.62%), Postives = 374/458 (81.66%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSR--GKSHGPVHEFNDEPLL--IQTSRWASL 60
           MSFRSI+RDVRD  GSLSRRSF+ +LS  ++  GKS G V + ++E L+  IQ + WA+L
Sbjct: 1   MSFRSIVRDVRDSIGSLSRRSFDFKLSSLNKEGGKSRGSVQDSHEEQLVVTIQETPWANL 60

Query: 61  PPELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQ 120
           PPELL DV++RLE SE+ WP+RR+VVACA+VCRSWRDMCKE+V+SPELSGKITFP++LKQ
Sbjct: 61  PPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQ 120

Query: 121 PGPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAAD 180
           PGPRD T+QCFIKR+KSNLTYHLYLCLSPALLVENGKFLLSAKR RRTT TEYVIS+ AD
Sbjct: 121 PGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHAD 180

Query: 181 DISRSSNGYIGKLRSNFLGTKFIIYDTQPPYNSN---QIPTLGRSRRFYSKKVSPKVPAG 240
            ISRSSN YIGK+RSNFLGTKFIIYDTQP YNSN    +  +G SRRFYSK+VSPKVP+G
Sbjct: 181 TISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQPVGLSRRFYSKRVSPKVPSG 240

Query: 241 SYSIAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPE-LNPRP-LEDSFRSI 300
           SY IAQ++YELNVLGTRGPRRM+C M SIP SSL  G +VPGQP+ + PR  L++SFRSI
Sbjct: 241 SYKIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSI 300

Query: 301 SFSKS----IDRSTEFSSSRFSDVAGMLVDEDGEV-----KDR---PLILRNKAPRWHEQ 360
           + S S     D S +FSS+RFSD+ G L  ED EV     K+R   PL+L+NK PRWHEQ
Sbjct: 301 TSSSSRKITYDYSNDFSSARFSDILGPL-SEDQEVVLEEGKERNSPPLVLKNKPPRWHEQ 360

Query: 361 LQCWCLNFRGRVTVASVKNFQLIAATSPAAEAPVPSQPPPQP-TQPTHSDH----DKIIL 420
           LQCWCLNFRGRVTVASVKNFQLIAA  P  + P P QP PQP TQP  S      DKIIL
Sbjct: 361 LQCWCLNFRGRVTVASVKNFQLIAANQPQPQ-PQP-QPQPQPLTQPQPSGQTDGPDKIIL 420

Query: 421 QFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 433
           QFGKVGKDMFTMD+RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 421 QFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455

[Close]

BLAST of Lsi08G005550 vs. ExPASy Swiss-Prot
Match: Q8LJA9 (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP3 PE=2 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 5.5e-173
Identity = 311/455 (68.35%), Postives = 364/455 (80.00%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVR------LSGHSRGKSHGPVHEFNDEPLLIQTSRWA 60
           MSFRSI+RDVRDGFGSLSRRSFEV       L+GH +GK+   + E +D P +I  SRWA
Sbjct: 1   MSFRSIVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESRWA 60

Query: 61  SLPPELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIAL 120
           SLPPELL +V+RRLEA E+TWPSRRNVV  AAVCR+WR+MCKE V SPE  GK+TFP+++
Sbjct: 61  SLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSI 120

Query: 121 KQPGPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLA 180
           KQPGPRDG IQC+IKRN+S  TYHLYLCLS  +  E GKF+L+AKR R+TT TEY IS+ 
Sbjct: 121 KQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMV 180

Query: 181 ADDISRSSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGR-SRRFYSKKVSPKVPAG 240
           + +ISRSS   IGKLRSNFLGTKFIIYDTQPPYN   +P +GR S+RF S KVSPKVP+ 
Sbjct: 181 SGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGAVVPHVGRTSKRFNSTKVSPKVPSV 240

Query: 241 SYSIAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPE-LNPRPLEDSFRS-- 300
           +Y+IAQ++YELNVLGTRGPRRM C M+SIP SS+EPG  VPGQPE + PR LEDSFRS  
Sbjct: 241 TYNIAQVSYELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRSTT 300

Query: 301 ---------ISFSKSI-DRSTEFSSSRFSDVAGMLV--DEDGEVKDRPLILRNKAPRWHE 360
                     SFSKSI D S +FSS+RFSD++G ++  D++GE+K+RPL+LRNK PRWHE
Sbjct: 301 SFSQSFRSTTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWHE 360

Query: 361 QLQCWCLNFRGRVTVASVKNFQLIAATS-PAAEAPVPSQPPPQPTQPTHSDHDKIILQFG 420
           QLQCWCLNFRGRVT+ASVKNFQL+AA S P A AP PSQP P       +D +K+ILQFG
Sbjct: 361 QLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGP-------ADPEKVILQFG 420

Query: 421 KVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 433
           KV +DMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 421 KVARDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 448

[Close]

BLAST of Lsi08G005550 vs. ExPASy Swiss-Prot
Match: Q69U54 (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP12 PE=2 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 1.5e-170
Identity = 301/451 (66.74%), Postives = 359/451 (79.60%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVR------LSGHSRGKSHGPVHEFNDEPLLIQTSRWA 60
           MSFRSI+RDVRD FGSLSRRSFEVR      LSGH RGKS G + E  D P+++  SRW 
Sbjct: 1   MSFRSIVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSLSELRDRPVVVDQSRWV 60

Query: 61  SLPPELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIAL 120
            LPPELL DV++RLE  E+ WPSR++VVACAAVCR+WR++CK++V+SPE+ GK+TFP++L
Sbjct: 61  GLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSL 120

Query: 121 KQPGPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLA 180
           KQPGPRDG IQCFIKR+KS LTY+LYLCLSPA+L ENGKFLL+AKR RR TSTEY+IS+ 
Sbjct: 121 KQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVD 180

Query: 181 ADDISRSSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGR-SRRFYSKKVSPKVPAG 240
           + +ISRSSNGY+GK+RSNFLGTKF++YDTQPPYN+  + +    SRR  S++VSPK+P G
Sbjct: 181 SKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQHGSRRISSRRVSPKLPTG 240

Query: 241 SYSIAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPE-LNPRPLEDSFRSIS 300
           SY IA + YELNVLGTRGPRRM CTM+SIP S+++P   VPGQPE L P P E+SFRS +
Sbjct: 241 SYPIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTN 300

Query: 301 FSKS---IDRSTEFSSSRFSDVAGML----VDEDGEVKDRPLILRNKAPRWHEQLQCWCL 360
            S     +DRS +FSSSRFS+++G       D+  E K+RPL+LRNK PRWHEQLQCWCL
Sbjct: 301 TSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCL 360

Query: 361 NFRGRVTVASVKNFQLIAATSPAAEAPVPSQPPPQ----PTQPTHSDHDKIILQFGKVGK 420
           NFRGRVTVASVKNFQLIAA S  +      Q   Q     +  + SDH K+ILQFGKVGK
Sbjct: 361 NFRGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGK 420

Query: 421 DMFTMDYRYPLSAFQAFAICLSSFDTKLACE 433
           DMFTMDYRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 421 DMFTMDYRYPLSAFQAFAICLTSFDTKLACE 451

[Close]

BLAST of Lsi08G005550 vs. ExPASy TrEMBL
Match: A0A0A0KBB8 (Tubby-like F-box protein OS=Cucumis sativus OX=3659 GN=Csa_6G056560 PE=3 SV=1)

HSP 1 Score: 867.8 bits (2241), Expect = 1.8e-248
Identity = 427/432 (98.84%), Postives = 428/432 (99.07%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSFRSILRDVRDGFGSLSRRSFEVRLSG+SRGKSHGPVHEFNDEPLLIQTSRWASLPPEL
Sbjct: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGNSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVK PELSGKITFPIALKQPGPR
Sbjct: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKCPELSGKITFPIALKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
           DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR
Sbjct: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
           SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI
Sbjct: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSID S
Sbjct: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDHS 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360
           TEFSSSRFSDVAGMLVDEDGE KDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 301 TEFSSSRFSDVAGMLVDEDGEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360

Query: 361 LIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420
           LIAATSPAAEAPVPSQPPPQP QPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI
Sbjct: 361 LIAATSPAAEAPVPSQPPPQPAQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420

Query: 421 CLSSFDTKLACE 433
           CLSSFDTKLACE
Sbjct: 421 CLSSFDTKLACE 432

[Close]

BLAST of Lsi08G005550 vs. ExPASy TrEMBL
Match: A0A1S3B363 (Tubby-like F-box protein OS=Cucumis melo OX=3656 GN=LOC103485618 PE=3 SV=1)

HSP 1 Score: 867.5 bits (2240), Expect = 2.4e-248
Identity = 427/432 (98.84%), Postives = 429/432 (99.31%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSFRSILRDVRDGFGSLSRRSFEVRLSG+SRGKSHGPV+EFNDEPLLIQTSRWASLPPEL
Sbjct: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGNSRGKSHGPVYEFNDEPLLIQTSRWASLPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVK PELSGKITFPIALKQPGPR
Sbjct: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKCPELSGKITFPIALKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
           DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR
Sbjct: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
           SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI
Sbjct: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSID S
Sbjct: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDHS 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360
           TEFSSSRFSDVAGMLVDEDGE KDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 301 TEFSSSRFSDVAGMLVDEDGEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360

Query: 361 LIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420
           LIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI
Sbjct: 361 LIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420

Query: 421 CLSSFDTKLACE 433
           CLSSFDTKLACE
Sbjct: 421 CLSSFDTKLACE 432

[Close]

BLAST of Lsi08G005550 vs. ExPASy TrEMBL
Match: A0A6J1JU54 (Tubby-like F-box protein OS=Cucurbita maxima OX=3661 GN=LOC111489754 PE=3 SV=1)

HSP 1 Score: 838.6 bits (2165), Expect = 1.2e-239
Identity = 414/434 (95.39%), Postives = 420/434 (96.77%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSFRSILRDVRDGFGSLSRRSFEVRLSG+SRGKSHGPVHEF+DEPLLIQTSRWASLPPEL
Sbjct: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGNSRGKSHGPVHEFHDEPLLIQTSRWASLPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPE SGKITFPIALKQPGPR
Sbjct: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPEFSGKITFPIALKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
           DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR
Sbjct: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
           SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI
Sbjct: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           AYELNVLGTRGPRRMNCTMYSIP SSLEPGCSVPGQPELNPRPLEDSFRS+SFSKSID S
Sbjct: 241 AYELNVLGTRGPRRMNCTMYSIPNSSLEPGCSVPGQPELNPRPLEDSFRSMSFSKSIDHS 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360
           TEFSSSRFSDVAGM+ +EDGE KDRPL+LRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 301 TEFSSSRFSDVAGMVANEDGEGKDRPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360

Query: 361 LIAATSPAAE--APVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAF 420
           LIAATSP AE  A   SQ PPQP QPTHSDHDKIILQFGKV KDMFTMDYRYPLSAFQAF
Sbjct: 361 LIAATSPGAEVAAAAASQAPPQPAQPTHSDHDKIILQFGKVSKDMFTMDYRYPLSAFQAF 420

Query: 421 AICLSSFDTKLACE 433
           AICLSSFDTKLACE
Sbjct: 421 AICLSSFDTKLACE 434

[Close]

BLAST of Lsi08G005550 vs. ExPASy TrEMBL
Match: A0A6J1FGI2 (Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111445284 PE=3 SV=1)

HSP 1 Score: 832.4 bits (2149), Expect = 8.6e-238
Identity = 412/436 (94.50%), Postives = 418/436 (95.87%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSFRSILRDVRDGFGSLSRRSFEVRLSG+SRGKSHGPVHEF+DEPLLIQTSRWASLPPEL
Sbjct: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGNSRGKSHGPVHEFHDEPLLIQTSRWASLPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPE SGKITFPIALKQPGPR
Sbjct: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPEFSGKITFPIALKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
           DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR
Sbjct: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
           SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI
Sbjct: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           AYELNVLGTRGPRRMNCTMYSIP SSLEPGCSVPGQPELNPRPLEDSFRS+SFSKSID S
Sbjct: 241 AYELNVLGTRGPRRMNCTMYSIPNSSLEPGCSVPGQPELNPRPLEDSFRSMSFSKSIDHS 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360
           TEFSSSRFSDVAGM+ +ED E KDRPL+LRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 301 TEFSSSRFSDVAGMVANEDSEGKDRPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360

Query: 361 LIAATSPAAE----APVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQ 420
           LIAATS  AE    A   SQ PPQP QPTHSDHDKIILQFGKV KDMFTMDYRYPLSAFQ
Sbjct: 361 LIAATSAGAEVAAAAAAASQAPPQPAQPTHSDHDKIILQFGKVSKDMFTMDYRYPLSAFQ 420

Query: 421 AFAICLSSFDTKLACE 433
           AFAICLSSFDTKLACE
Sbjct: 421 AFAICLSSFDTKLACE 436

[Close]

BLAST of Lsi08G005550 vs. ExPASy TrEMBL
Match: A0A6J1HIP8 (Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111463944 PE=3 SV=1)

HSP 1 Score: 820.8 bits (2119), Expect = 2.6e-234
Identity = 407/434 (93.78%), Postives = 416/434 (95.85%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSFRSILRDVRDGFGSLSRRSFE+RLS HSRGKSHGPVHEF+DEPLLIQTSRWASLPPEL
Sbjct: 1   MSFRSILRDVRDGFGSLSRRSFELRLSSHSRGKSHGPVHEFDDEPLLIQTSRWASLPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           L DVVRRLEASENTWPSRRNVVACAAVCRSWRD+CKE+VKSPE SGKITFPIALKQPGPR
Sbjct: 61  LLDVVRRLEASENTWPSRRNVVACAAVCRSWRDVCKEIVKSPEFSGKITFPIALKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
           DGTIQCFIKRNKSNLTYHLYLCLSP LLVENGKFLLSAKR RRTTSTEYVISLAADDISR
Sbjct: 121 DGTIQCFIKRNKSNLTYHLYLCLSPTLLVENGKFLLSAKRMRRTTSTEYVISLAADDISR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
           SSNGYIGKLRSNFLGTKFIIYDTQ PYN NQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI
Sbjct: 181 SSNGYIGKLRSNFLGTKFIIYDTQIPYNGNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           AYELNVLGTRGPRRM+CTMYSIPTSSLEP  SVPGQPELNPRPL+DSFRSISFSKSID S
Sbjct: 241 AYELNVLGTRGPRRMHCTMYSIPTSSLEPDSSVPGQPELNPRPLKDSFRSISFSKSIDHS 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVK--DRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKN 360
           TEFSSSRFSDVAG+L DEDG+ K  D PLILRNKAPRWHEQLQCWCLNFRGRVTVASVKN
Sbjct: 301 TEFSSSRFSDVAGVLADEDGDRKDIDIPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKN 360

Query: 361 FQLIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAF 420
           FQLIAATSPAAE  VPSQPPPQP QPTHSDHDKIILQFGKVGKD+FTMDYRYPLSAFQAF
Sbjct: 361 FQLIAATSPAAEVSVPSQPPPQPAQPTHSDHDKIILQFGKVGKDIFTMDYRYPLSAFQAF 420

Query: 421 AICLSSFDTKLACE 433
           AICLSSFDTKLACE
Sbjct: 421 AICLSSFDTKLACE 434

[Close]

BLAST of Lsi08G005550 vs. NCBI nr
Match: XP_004140966.1 (tubby-like F-box protein 8 [Cucumis sativus] >XP_011656636.1 tubby-like F-box protein 8 [Cucumis sativus] >XP_031743283.1 tubby-like F-box protein 8 [Cucumis sativus] >KGN46139.1 hypothetical protein Csa_005590 [Cucumis sativus])

HSP 1 Score: 867.8 bits (2241), Expect = 3.8e-248
Identity = 427/432 (98.84%), Postives = 428/432 (99.07%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSFRSILRDVRDGFGSLSRRSFEVRLSG+SRGKSHGPVHEFNDEPLLIQTSRWASLPPEL
Sbjct: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGNSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVK PELSGKITFPIALKQPGPR
Sbjct: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKCPELSGKITFPIALKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
           DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR
Sbjct: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
           SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI
Sbjct: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSID S
Sbjct: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDHS 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360
           TEFSSSRFSDVAGMLVDEDGE KDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 301 TEFSSSRFSDVAGMLVDEDGEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360

Query: 361 LIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420
           LIAATSPAAEAPVPSQPPPQP QPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI
Sbjct: 361 LIAATSPAAEAPVPSQPPPQPAQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420

Query: 421 CLSSFDTKLACE 433
           CLSSFDTKLACE
Sbjct: 421 CLSSFDTKLACE 432

[Close]

BLAST of Lsi08G005550 vs. NCBI nr
Match: XP_008441515.1 (PREDICTED: tubby-like F-box protein 8 [Cucumis melo] >XP_008441516.1 PREDICTED: tubby-like F-box protein 8 [Cucumis melo] >XP_008441517.1 PREDICTED: tubby-like F-box protein 8 [Cucumis melo])

HSP 1 Score: 867.5 bits (2240), Expect = 5.0e-248
Identity = 427/432 (98.84%), Postives = 429/432 (99.31%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSFRSILRDVRDGFGSLSRRSFEVRLSG+SRGKSHGPV+EFNDEPLLIQTSRWASLPPEL
Sbjct: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGNSRGKSHGPVYEFNDEPLLIQTSRWASLPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVK PELSGKITFPIALKQPGPR
Sbjct: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKCPELSGKITFPIALKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
           DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR
Sbjct: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
           SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI
Sbjct: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSID S
Sbjct: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDHS 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360
           TEFSSSRFSDVAGMLVDEDGE KDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 301 TEFSSSRFSDVAGMLVDEDGEGKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360

Query: 361 LIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420
           LIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI
Sbjct: 361 LIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420

Query: 421 CLSSFDTKLACE 433
           CLSSFDTKLACE
Sbjct: 421 CLSSFDTKLACE 432

[Close]

BLAST of Lsi08G005550 vs. NCBI nr
Match: XP_038885535.1 (tubby-like F-box protein 8 [Benincasa hispida] >XP_038885536.1 tubby-like F-box protein 8 [Benincasa hispida])

HSP 1 Score: 866.7 bits (2238), Expect = 8.5e-248
Identity = 425/432 (98.38%), Postives = 429/432 (99.31%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSFRSILRDVRDGFGSLSRRSFEVRLSG+SRGKSHGPVHEFNDEPLLIQTS WASLPPEL
Sbjct: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGNSRGKSHGPVHEFNDEPLLIQTSHWASLPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMC+EMVKSPELSGKITFPIALKQPGPR
Sbjct: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCREMVKSPELSGKITFPIALKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
           DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR
Sbjct: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
           SSNGYIGKLRSNFLGTKFIIYDTQPPYN+NQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI
Sbjct: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNNNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSID S
Sbjct: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDHS 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360
           TEFSSSRFSDVAGMLVDE+GEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 301 TEFSSSRFSDVAGMLVDEEGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360

Query: 361 LIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420
           LIAATSPAAEAPVPSQPPPQP QPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI
Sbjct: 361 LIAATSPAAEAPVPSQPPPQPAQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420

Query: 421 CLSSFDTKLACE 433
           CLSSFDTKLACE
Sbjct: 421 CLSSFDTKLACE 432

[Close]

BLAST of Lsi08G005550 vs. NCBI nr
Match: XP_022993883.1 (tubby-like F-box protein 8 [Cucurbita maxima] >XP_022993885.1 tubby-like F-box protein 8 [Cucurbita maxima] >XP_022993886.1 tubby-like F-box protein 8 [Cucurbita maxima] >XP_022993887.1 tubby-like F-box protein 8 [Cucurbita maxima])

HSP 1 Score: 838.6 bits (2165), Expect = 2.5e-239
Identity = 414/434 (95.39%), Postives = 420/434 (96.77%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSFRSILRDVRDGFGSLSRRSFEVRLSG+SRGKSHGPVHEF+DEPLLIQTSRWASLPPEL
Sbjct: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGNSRGKSHGPVHEFHDEPLLIQTSRWASLPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPE SGKITFPIALKQPGPR
Sbjct: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPEFSGKITFPIALKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
           DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR
Sbjct: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
           SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI
Sbjct: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           AYELNVLGTRGPRRMNCTMYSIP SSLEPGCSVPGQPELNPRPLEDSFRS+SFSKSID S
Sbjct: 241 AYELNVLGTRGPRRMNCTMYSIPNSSLEPGCSVPGQPELNPRPLEDSFRSMSFSKSIDHS 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360
           TEFSSSRFSDVAGM+ +EDGE KDRPL+LRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 301 TEFSSSRFSDVAGMVANEDGEGKDRPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360

Query: 361 LIAATSPAAE--APVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAF 420
           LIAATSP AE  A   SQ PPQP QPTHSDHDKIILQFGKV KDMFTMDYRYPLSAFQAF
Sbjct: 361 LIAATSPGAEVAAAAASQAPPQPAQPTHSDHDKIILQFGKVSKDMFTMDYRYPLSAFQAF 420

Query: 421 AICLSSFDTKLACE 433
           AICLSSFDTKLACE
Sbjct: 421 AICLSSFDTKLACE 434

[Close]

BLAST of Lsi08G005550 vs. NCBI nr
Match: XP_023551422.1 (tubby-like F-box protein 8 [Cucurbita pepo subsp. pepo] >XP_023551423.1 tubby-like F-box protein 8 [Cucurbita pepo subsp. pepo] >XP_023551424.1 tubby-like F-box protein 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 834.3 bits (2154), Expect = 4.7e-238
Identity = 413/437 (94.51%), Postives = 419/437 (95.88%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSFRSILRDVRDGFGSLSRRSFEVRLSG+SRGKSHGPVHEF+DEPLLIQTSRWASLPPEL
Sbjct: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGNSRGKSHGPVHEFHDEPLLIQTSRWASLPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPE SGKITFPIALKQPGPR
Sbjct: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPEFSGKITFPIALKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
           DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR
Sbjct: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
           SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI
Sbjct: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           AYELNVLGTRGPRRMNCTMYSIP SSLEPGCSVPGQPELNPRPLEDSFRS+SFSKSID S
Sbjct: 241 AYELNVLGTRGPRRMNCTMYSIPNSSLEPGCSVPGQPELNPRPLEDSFRSMSFSKSIDHS 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360
           TEFSSSRFSDVAGM+ +EDGE KDRPL+LRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 301 TEFSSSRFSDVAGMVANEDGEGKDRPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360

Query: 361 LIAATSPAAE-----APVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAF 420
           LIAATS  AE     A   SQ PPQP QPTHSDHDKIILQFGKV KDMFTMDYRYPLSAF
Sbjct: 361 LIAATSAGAEVAAAAAAAASQAPPQPAQPTHSDHDKIILQFGKVSKDMFTMDYRYPLSAF 420

Query: 421 QAFAICLSSFDTKLACE 433
           QAFAICLSSFDTKLACE
Sbjct: 421 QAFAICLSSFDTKLACE 437

[Close]

BLAST of Lsi08G005550 vs. TAIR 10
Match: AT1G76900.1 (tubby like protein 1 )

HSP 1 Score: 610.5 bits (1573), Expect = 1.0e-174
Identity = 328/458 (71.62%), Postives = 374/458 (81.66%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSR--GKSHGPVHEFNDEPLL--IQTSRWASL 60
           MSFRSI+RDVRD  GSLSRRSF+ +LS  ++  GKS G V + ++E L+  IQ + WA+L
Sbjct: 1   MSFRSIVRDVRDSIGSLSRRSFDFKLSSLNKEGGKSRGSVQDSHEEQLVVTIQETPWANL 60

Query: 61  PPELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQ 120
           PPELL DV++RLE SE+ WP+RR+VVACA+VCRSWRDMCKE+V+SPELSGKITFP++LKQ
Sbjct: 61  PPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQ 120

Query: 121 PGPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAAD 180
           PGPRD T+QCFIKR+KSNLTYHLYLCLSPALLVENGKFLLSAKR RRTT TEYVIS+ AD
Sbjct: 121 PGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHAD 180

Query: 181 DISRSSNGYIGKLRSNFLGTKFIIYDTQPPYNSN---QIPTLGRSRRFYSKKVSPKVPAG 240
            ISRSSN YIGK+RSNFLGTKFIIYDTQP YNSN    +  +G SRRFYSK+VSPKVP+G
Sbjct: 181 TISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQPVGLSRRFYSKRVSPKVPSG 240

Query: 241 SYSIAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPE-LNPRP-LEDSFRSI 300
           SY IAQ++YELNVLGTRGPRRM+C M SIP SSL  G +VPGQP+ + PR  L++SFRSI
Sbjct: 241 SYKIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSI 300

Query: 301 SFSKS----IDRSTEFSSSRFSDVAGMLVDEDGEV-----KDR---PLILRNKAPRWHEQ 360
           + S S     D S +FSS+RFSD+ G L  ED EV     K+R   PL+L+NK PRWHEQ
Sbjct: 301 TSSSSRKITYDYSNDFSSARFSDILGPL-SEDQEVVLEEGKERNSPPLVLKNKPPRWHEQ 360

Query: 361 LQCWCLNFRGRVTVASVKNFQLIAATSPAAEAPVPSQPPPQP-TQPTHSDH----DKIIL 420
           LQCWCLNFRGRVTVASVKNFQLIAA  P  + P P QP PQP TQP  S      DKIIL
Sbjct: 361 LQCWCLNFRGRVTVASVKNFQLIAANQPQPQ-PQP-QPQPQPLTQPQPSGQTDGPDKIIL 420

Query: 421 QFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 433
           QFGKVGKDMFTMD+RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 421 QFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455

[Close]

BLAST of Lsi08G005550 vs. TAIR 10
Match: AT1G76900.2 (tubby like protein 1 )

HSP 1 Score: 610.5 bits (1573), Expect = 1.0e-174
Identity = 328/458 (71.62%), Postives = 374/458 (81.66%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSR--GKSHGPVHEFNDEPLL--IQTSRWASL 60
           MSFRSI+RDVRD  GSLSRRSF+ +LS  ++  GKS G V + ++E L+  IQ + WA+L
Sbjct: 1   MSFRSIVRDVRDSIGSLSRRSFDFKLSSLNKEGGKSRGSVQDSHEEQLVVTIQETPWANL 60

Query: 61  PPELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQ 120
           PPELL DV++RLE SE+ WP+RR+VVACA+VCRSWRDMCKE+V+SPELSGKITFP++LKQ
Sbjct: 61  PPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQ 120

Query: 121 PGPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAAD 180
           PGPRD T+QCFIKR+KSNLTYHLYLCLSPALLVENGKFLLSAKR RRTT TEYVIS+ AD
Sbjct: 121 PGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHAD 180

Query: 181 DISRSSNGYIGKLRSNFLGTKFIIYDTQPPYNSN---QIPTLGRSRRFYSKKVSPKVPAG 240
            ISRSSN YIGK+RSNFLGTKFIIYDTQP YNSN    +  +G SRRFYSK+VSPKVP+G
Sbjct: 181 TISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQPVGLSRRFYSKRVSPKVPSG 240

Query: 241 SYSIAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPE-LNPRP-LEDSFRSI 300
           SY IAQ++YELNVLGTRGPRRM+C M SIP SSL  G +VPGQP+ + PR  L++SFRSI
Sbjct: 241 SYKIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSI 300

Query: 301 SFSKS----IDRSTEFSSSRFSDVAGMLVDEDGEV-----KDR---PLILRNKAPRWHEQ 360
           + S S     D S +FSS+RFSD+ G L  ED EV     K+R   PL+L+NK PRWHEQ
Sbjct: 301 TSSSSRKITYDYSNDFSSARFSDILGPL-SEDQEVVLEEGKERNSPPLVLKNKPPRWHEQ 360

Query: 361 LQCWCLNFRGRVTVASVKNFQLIAATSPAAEAPVPSQPPPQP-TQPTHSDH----DKIIL 420
           LQCWCLNFRGRVTVASVKNFQLIAA  P  + P P QP PQP TQP  S      DKIIL
Sbjct: 361 LQCWCLNFRGRVTVASVKNFQLIAANQPQPQ-PQP-QPQPQPLTQPQPSGQTDGPDKIIL 420

Query: 421 QFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 433
           QFGKVGKDMFTMD+RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 421 QFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455

[Close]

BLAST of Lsi08G005550 vs. TAIR 10
Match: AT1G25280.1 (tubby like protein 10 )

HSP 1 Score: 597.4 bits (1539), Expect = 9.0e-171
Identity = 309/447 (69.13%), Postives = 363/447 (81.21%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHG-PVHEFND-----EPLLIQTSRWA 60
           MSFR I++D+RDGFGSLSRRSF+ RLS   +GK+ G    E++       P+++QTSRWA
Sbjct: 1   MSFRGIVQDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWA 60

Query: 61  SLPPELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIAL 120
           +LPPELL DV++RLE SE+ WP+R++VVACA+VCRSWR MC+E+V  PE+ GK+TFP++L
Sbjct: 61  NLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSL 120

Query: 121 KQPGPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLA 180
           KQPGPRD  IQCFIKR+KS LT+HL+LCLSPALLVENGKFLLSAKRTRRTT TEY+IS+ 
Sbjct: 121 KQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMD 180

Query: 181 ADDISRSSNGYIGKLRSNFLGTKFIIYDTQPPYN--SNQIPTLGRSR-RFYSKKVSPKVP 240
           AD+ISRSSN Y+GKLRSNFLGTKF++YDTQPP N  S+ + T   SR RF+S++VSPKVP
Sbjct: 181 ADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVP 240

Query: 241 AGSYSIAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPE-LNPRP--LEDSF 300
           +GSY+IAQI YELNVLGTRGPRRM+C M SIP SSLEPG SVP QPE L P P  L+DSF
Sbjct: 241 SGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSF 300

Query: 301 RS-ISFSKSI--DRSTEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCL 360
           RS ISFSKS    RS +FSSSRFS++     D + E   RPLIL+NK PRWHEQLQCWCL
Sbjct: 301 RSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCL 360

Query: 361 NFRGRVTVASVKNFQLIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFT 420
           NFRGRVTVASVKNFQL+AA  P  +    +  P   + P H + DK+ILQFGKVGKDMFT
Sbjct: 361 NFRGRVTVASVKNFQLVAARQPQPQGTGAAAAP--TSAPAHPEQDKVILQFGKVGKDMFT 420

Query: 421 MDYRYPLSAFQAFAICLSSFDTKLACE 433
           MDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 421 MDYRYPLSAFQAFAICLSSFDTKLACE 445

[Close]

BLAST of Lsi08G005550 vs. TAIR 10
Match: AT1G43640.1 (tubby like protein 5 )

HSP 1 Score: 555.8 bits (1431), Expect = 3.0e-158
Identity = 283/441 (64.17%), Postives = 350/441 (79.37%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSG---HSRGKSHGPVHEFNDEPLLIQTSRWASLP 60
           MSF SI+RDVRD  GS SRRSF+VR+S    H R KSHG V    ++ ++I+ +RWA+LP
Sbjct: 1   MSFLSIVRDVRDTVGSFSRRSFDVRVSNGTTHQRSKSHG-VEAHIEDLIVIKNTRWANLP 60

Query: 61  PELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQP 120
             LL DV+++L+ SE+TWP+R+ VVACA VC++WR MCK++VKSPE SGK+TFP++LKQP
Sbjct: 61  AALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQP 120

Query: 121 GPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADD 180
           GPRDG IQC+IKR+KSN+TYHLYL LSPA+LVE+GKFLLSAKR+RR T TEYVIS+ AD+
Sbjct: 121 GPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADN 180

Query: 181 ISRSSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQI-PTLGRSRRFYSKKVSPKVPAGSYS 240
           ISRSS+ YIGKL+SNFLGTKFI+YDT P YNS+QI     RSR F SKKVSPKVP+GSY+
Sbjct: 181 ISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSPPNRSRSFNSKKVSPKVPSGSYN 240

Query: 241 IAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKS 300
           IAQ+ YELN+LGTRGPRRMNC M+SIP+ +LEPG +VP QPE   R L++SFRSI  SK 
Sbjct: 241 IAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIGSSKI 300

Query: 301 IDRSTEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASV 360
           ++ S +F+  +         +E+G+V  RPL+L+ K PRW + L+CWCLNF+GRVTVASV
Sbjct: 301 VNHSGDFTRPK---------EEEGKV--RPLVLKTKPPRWLQPLRCWCLNFKGRVTVASV 360

Query: 361 KNFQLIAAT-----SPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYP 420
           KNFQL++A      S +    + ++P   P QP  S+HDKIIL FGKVGKDMFTMDYRYP
Sbjct: 361 KNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRYP 420

Query: 421 LSAFQAFAICLSSFDTKLACE 433
           LSAFQAFAI LS+FDTKLACE
Sbjct: 421 LSAFQAFAISLSTFDTKLACE 429

[Close]

BLAST of Lsi08G005550 vs. TAIR 10
Match: AT2G47900.1 (tubby like protein 3 )

HSP 1 Score: 471.1 bits (1211), Expect = 9.7e-133
Identity = 243/432 (56.25%), Postives = 306/432 (70.83%), Query Frame = 0


Query: 1   MSFRSILRDVRDGFGSLSRRSFEVRLSGHSRGKSHGPVHEFNDEPLLIQTSRWASLPPEL 60
           MSF+S+++D+R   GS+SR+ F+VR  G+ R +S   V + +      + S WAS+PPEL
Sbjct: 1   MSFKSLIQDMRGELGSISRKGFDVRF-GYGRSRSQRVVQDTSVPVDAFKQSCWASMPPEL 60

Query: 61  LCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCKEMVKSPELSGKITFPIALKQPGPR 120
           L DV+ R+E SE+TWPSR+NVV+CA VCR+WR++ KE+V+ PELS K+TFPI+LKQPGPR
Sbjct: 61  LRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPR 120

Query: 121 DGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISR 180
              +QC+I RN+SN TY+LYL L+ A   ++GKFLL+AKR RR T T+Y+ISL  DD+SR
Sbjct: 121 GSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSR 180

Query: 181 SSNGYIGKLRSNFLGTKFIIYDTQPPYNSNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQI 240
            SN YIGKLRSNFLGTKF +YD QP     Q+     SR    K+VSP++P+G+Y +A I
Sbjct: 181 GSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAHI 240

Query: 241 AYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDRS 300
           +YELNVLG+RGPRRM C M +IP S++EPG + P Q EL    L DSF S SF +S    
Sbjct: 241 SYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNL-DSFPSFSFFRSKSIR 300

Query: 301 TEFSSSRFSDVAGMLVDEDGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ 360
            E   S  S  A          K+  L+L+NKAPRWHEQLQCWCLNF GRVTVASVKNFQ
Sbjct: 301 AESLPSGPSSAA---------QKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQ 360

Query: 361 LIAATSPAAEAPVPSQPPPQPTQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 420
           L+AA         P   P  P      +H+ +ILQFGKVGKD+FTMDY+YP+SAFQAF I
Sbjct: 361 LVAA---------PENGPAGP------EHENVILQFGKVGKDVFTMDYQYPISAFQAFTI 406

Query: 421 CLSSFDTKLACE 433
           CLSSFDTK+ACE
Sbjct: 421 CLSSFDTKIACE 406

The following BLAST results are available for this feature:

BLAST of Lsi08G005550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q75HX5	1.2e-180	73.01	Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP8 PE=...	[more]
Q2QXB2	4.3e-178	71.05	Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP14 P...	[more]
Q9ZP59	1.4e-173	71.62	Tubby-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=TULP1 PE=1 SV=1	[more]
Q8LJA9	5.5e-173	68.35	Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP3 PE=...	[more]
Q69U54	1.5e-170	66.74	Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP12 P...	[more]

BLAST of Lsi08G005550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBB8	1.8e-248	98.84	Tubby-like F-box protein OS=Cucumis sativus OX=3659 GN=Csa_6G056560 PE=3 SV=1	[more]
A0A1S3B363	2.4e-248	98.84	Tubby-like F-box protein OS=Cucumis melo OX=3656 GN=LOC103485618 PE=3 SV=1	[more]
A0A6J1JU54	1.2e-239	95.39	Tubby-like F-box protein OS=Cucurbita maxima OX=3661 GN=LOC111489754 PE=3 SV=1	[more]
A0A6J1FGI2	8.6e-238	94.50	Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111445284 PE=3 SV=1	[more]
A0A6J1HIP8	2.6e-234	93.78	Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111463944 PE=3 SV=1	[more]

BLAST of Lsi08G005550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140966.1	3.8e-248	98.84	tubby-like F-box protein 8 [Cucumis sativus] >XP_011656636.1 tubby-like F-box pr...	[more]
XP_008441515.1	5.0e-248	98.84	PREDICTED: tubby-like F-box protein 8 [Cucumis melo] >XP_008441516.1 PREDICTED: ...	[more]
XP_038885535.1	8.5e-248	98.38	tubby-like F-box protein 8 [Benincasa hispida] >XP_038885536.1 tubby-like F-box ...	[more]
XP_022993883.1	2.5e-239	95.39	tubby-like F-box protein 8 [Cucurbita maxima] >XP_022993885.1 tubby-like F-box p...	[more]
XP_023551422.1	4.7e-238	94.51	tubby-like F-box protein 8 [Cucurbita pepo subsp. pepo] >XP_023551423.1 tubby-li...	[more]

BLAST of Lsi08G005550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76900.1	1.0e-174	71.62	tubby like protein 1	[more]
AT1G76900.2	1.0e-174	71.62	tubby like protein 1	[more]
AT1G25280.1	9.0e-171	69.13	tubby like protein 10	[more]
AT1G43640.1	3.0e-158	64.17	tubby like protein 5	[more]
AT2G47900.1	9.7e-133	56.25	tubby like protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000007	Tubby, C-terminal	PRINTS	PR01573	SUPERTUBBY	coord: 389..408 score: 67.5 coord: 169..185 score: 49.73 coord: 185..209 score: 60.73 coord: 234..261 score: 54.06 coord: 410..432 score: 85.57 coord: 329..346 score: 65.15 coord: 347..363 score: 82.09
IPR000007	Tubby, C-terminal	PFAM	PF01167	Tub	coord: 116..427 e-value: 1.0E-115 score: 385.8
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 52..100 e-value: 7.0E-9 score: 35.3
IPR025659	Tubby-like, C-terminal	GENE3D	3.20.90.10	Tubby Protein; Chain A	coord: 113..426 e-value: 1.1E-98 score: 331.7
IPR025659	Tubby-like, C-terminal	SUPERFAMILY	54518	Tubby C-terminal domain-like	coord: 102..432
None	No IPR available	GENE3D	1.20.1280.50		coord: 48..103 e-value: 1.4E-6 score: 30.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..388
None	No IPR available	PANTHER	PTHR16517	TUBBY-RELATED	coord: 1..432
None	No IPR available	PANTHER	PTHR16517:SF109	TUBBY-LIKE F-BOX PROTEIN	coord: 1..432
IPR018066	Tubby, C-terminal, conserved site	PROSITE	PS01200	TUB_1	coord: 347..360
IPR018066	Tubby, C-terminal, conserved site	PROSITE	PS01201	TUB_2	coord: 417..432
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 48..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G005550.1	Lsi08G005550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005515	protein binding