Homology
BLAST of Lsi08G003910 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 443.4 bits (1139), Expect = 3.8e-123
Identity = 228/577 (39.51%), Postives = 340/577 (58.93%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
+ YA +F +P + +WN FRG+ + + L+ M S+ + PN +TFP VLKS
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK+ AF EG++IH V+K G + + +V T+LI +Y + A+KVF + R++V++
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTM------ 180
T++I GY + A++LFD P +D+V WN M+SGY GN + A +LF M
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 181 PCRDTM--------------------SW-------------NTMLNGYANNGDVEACEQL 240
P TM W N +++ Y+ G++E L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 241 FEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLGA 300
FE +P ++V SWN LIGGY H + E L F+ ML G PND T++++L ACA LGA
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHLGA 383
Query: 301 LDLGKWVHVY--AATIGYKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVI 360
+D+G+W+HVY G + +LIDMY+KCG IE A +VF S+ K L +WN++I
Sbjct: 384 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 443
Query: 361 CGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSI 420
G A HG + LF +M+ G +PD ITF+G+L +C+H G+++ G F +M DY +
Sbjct: 444 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 503
Query: 421 TPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQ 480
TP++EHYGCM+DL G +GL A E + M ME D VIW +LL AC+++ N++L E +
Sbjct: 504 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 563
Query: 481 KLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFY 537
LI++EP+NP +YV+LSNIY GRW +VA+ + L+ D G KK+PGCS IE++ V +F
Sbjct: 564 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 623
BLAST of Lsi08G003910 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 439.9 bits (1130), Expect = 4.2e-122
Identity = 218/576 (37.85%), Postives = 334/576 (57.99%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKS-MDVRPNCFTFPLVLK 60
+ YAR +FD P P WN R Y I+ F M S PN +TFP ++K
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 61 SCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVA 120
+ A+ + G+ +H +K + FVA +LI Y + SA KVF + E+++V+
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 121 WTSMISGYILCNDVALARRLFDLAPERDI------------------------------- 180
W SMI+G++ A LF D+
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 181 --------VLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMSWNTMLNGYANNGDVEACEQ 240
L N M+ Y G++E A++LFD M +D ++W TML+GYA + D EA +
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 241 LFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLG 300
+ MP +++ +WN LI Y NG+ E L F + + + N TLV+ LSACA++G
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 301 ALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVIC 360
AL+LG+W+H Y G + N +V +ALI MYSKCG +E + EVF S++ +D+ W+++I
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 361 GLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSIT 420
GLA HGCG +A+ +F++M+ KP+G+TF V C+C+H GLV+E S F+ M +Y I
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 421 PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQK 480
P+ +HY C+VD+ GR+G L++A++F++ MP+ +W ALLGAC+I+ N++LAE+A +
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTR 559
Query: 481 LIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFYS 537
L++LEP+N +V+LSNIY LG+W++V+ L+ MR TG KK PGCS IE++ + +F S
Sbjct: 560 LLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 619
BLAST of Lsi08G003910 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 425.2 bits (1092), Expect = 1.1e-117
Identity = 208/521 (39.92%), Postives = 314/521 (60.27%), Query Frame = 0
Query: 4 ARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKSCAK 63
A +F+ +P V L N+ R + N + F+F +M+ + + FT+P +LK+C+
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 64 NGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYS--GGRAIGSAYKVFVEMLERNIVAWT 123
+ +H + K G + +V LID YS GG + A K+F +M ER+ V+W
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 124 SMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMS 183
SM+ G + ++ ARRLFD P+RD++ WN M+ GY M A +LF+ MP R+T+S
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249
Query: 184 WNTMLNGYANNGDVEACEQLFEEM--PDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLID 243
W+TM+ GY+ GD+E +F++M P +NV +W +I GYA G E +M+
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 244 GLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIEN 303
GL + A ++++L+AC G L LG +H N YV NAL+DMY+KCG ++
Sbjct: 310 GLKF-DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 369
Query: 304 AMEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTH 363
A +VF + KDL++WN+++ GL HG G +A+ LF +M+ G +PD +TFI VLCSC H
Sbjct: 370 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 429
Query: 364 LGLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWA 423
GL++EGI YF SM Y + PQ+EHYGC+VDL GR G L AI+ V+ MPME + VIW
Sbjct: 430 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 489
Query: 424 ALLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTG 483
ALLGACR++ +D+A+ L L++L+P +P NY +LSNIY W+ VA ++ M+ G
Sbjct: 490 ALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 549
Query: 484 SKKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMK 521
+K G S +E+ D + +F D+ H +S +IY +L L++
Sbjct: 550 VEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
BLAST of Lsi08G003910 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 411.4 bits (1056), Expect = 1.6e-113
Identity = 214/525 (40.76%), Postives = 298/525 (56.76%), Query Frame = 0
Query: 4 ARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKSCAK 63
AR +FD P+ WNA Y N E LF KS + + LV +C
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF---KSRE------NWALVSWNCLL 235
Query: 64 NGAFLEGEEIHCEVIKGGFEGNQFVA-TTLIDVYSGGRAIGSAYKVFVEMLERNIVAWTS 123
G + + + V+ T+I Y+ I A ++F E +++ WT+
Sbjct: 236 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 295
Query: 124 MISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMSW 183
M+SGYI V AR LFD PER+ V WN M++GY+ ME A++LFD MPCR+ +W
Sbjct: 296 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 355
Query: 184 NTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLV 243
NTM+ GYA G + + LF++MP R+ SW +I GY+ +G FE L F +M +G
Sbjct: 356 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 415
Query: 244 VPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENAME 303
+ N ++ + LS CA + AL+LGK +H GY+ +VGNAL+ MY KCG IE A +
Sbjct: 416 L-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 475
Query: 304 VFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGL 363
+F M KD+++WN++I G + HG G AL F MK G KPD T + VL +C+H GL
Sbjct: 476 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 535
Query: 364 VEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 423
V++G YF +M DY + P +HY CMVDL GRAGLL+ A +K MP E DA IW LL
Sbjct: 536 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 595
Query: 424 GACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKK 483
GA R++ N +LAE A K+ +EP+N YV+LSN+Y GRW DV +L++ MRD G KK
Sbjct: 596 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 655
Query: 484 LPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 528
+PG S IE+ + F DE H + EI+ L+ L ++ GY
Sbjct: 656 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGY 690
BLAST of Lsi08G003910 vs. ExPASy Swiss-Prot
Match:
Q1PEU4 (Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E9 PE=2 SV=2)
HSP 1 Score: 402.5 bits (1033), Expect = 7.4e-111
Identity = 209/522 (40.04%), Postives = 312/522 (59.77%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVA-LWNATFRGYFHNEFYREVIFLFWKM-KSMDVRPNCFTFPLVL 60
+ YAR LFD P + L N+ + Y Y + L+ + K P+ FTF +
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 61 KSCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIV 120
KSC+ + +G ++H ++ + GF + +V+T ++D+Y+ +G A F EM R+ V
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 121 AWTSMISGYILCNDVALARRLFDLAPE-RDIVLWNIMVSGYIGIGNMEAARKLFDTMPCR 180
+WT++ISGYI C ++ LA +LFD P +D+V++N M+ G++ G+M +AR+LFD M +
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 181 DTMSWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRML 240
++W TM++GY N D++A +LF+ MP+RN+ SWN +IGGY N + E + F+ M
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 241 IDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVI 300
+ P+D T+++VL A + GAL LG+W H + V V A++DMYSKCG I
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 301 ENAMEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSC 360
E A +F M K + +WN++I G A +G AL LF M I EKPD IT + V+ +C
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPDEITMLAVITAC 385
Query: 361 THLGLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVI 420
H GLVEEG +F+ M + + +IEHYGCMVDL GRAG L A + + MP E + +I
Sbjct: 386 NHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 445
Query: 421 WAALLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRD 480
++ L AC YK+I+ AE L+K ++LEP+N NYV+L N+Y RW D +K +MR
Sbjct: 446 LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 505
Query: 481 TGSKKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLM 520
+KK GCSLIE+N V +F S D H + I+ VL L+
Sbjct: 506 NQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLL 545
BLAST of Lsi08G003910 vs. ExPASy TrEMBL
Match:
A0A0A0KBY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017080 PE=4 SV=1)
HSP 1 Score: 1040.4 bits (2689), Expect = 2.6e-300
Identity = 499/538 (92.75%), Postives = 518/538 (96.28%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
MA+ARHLFDHFPDPKV LWNA RGYFHN FYREV+FLF KMKSMDVRPNCFTFPLVLKS
Sbjct: 1 MAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKS 60
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK GAF+EGEEIHCEVIKGG EGNQFVATTLIDVYSGGRAIGSAYK+FV MLERNIVAW
Sbjct: 61 CAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAW 120
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 121 TSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTM 180
Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
SWNTMLNGYANNGDVEACEQLFEEMP+RNVFSWNGLIGGYAHNG FFEVL CFKRMLIDG
Sbjct: 181 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 240
Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCG+IENA
Sbjct: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 300
Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 301 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 360
Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
GLVEEG SYFNSM+++YSI PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA
Sbjct: 361 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
LLGACRIYKNIDLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGS 480
Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
KKLPGCSLIEVNDSVV+FYSLDERHSQSKEIYGVLKGLMKLLRSFGYEP +MEL QGS
Sbjct: 481 KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNMMELLQGS 538
BLAST of Lsi08G003910 vs. ExPASy TrEMBL
Match:
A0A5A7V6Y9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001800 PE=4 SV=1)
HSP 1 Score: 1032.7 bits (2669), Expect = 5.4e-298
Identity = 495/538 (92.01%), Postives = 516/538 (95.91%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
MA+ARHLFDHF DPKV LWNA FRGYFH FY+EV+FLF KMKSM VRPNCFTFPLVLKS
Sbjct: 56 MAHARHLFDHFLDPKVELWNAIFRGYFHKAFYKEVVFLFGKMKSMGVRPNCFTFPLVLKS 115
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK GAF+EGEEIH EVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERNIVAW
Sbjct: 116 CAKIGAFVEGEEIHSEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVVMLERNIVAW 175
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 176 TSMISGYILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTM 235
Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
SWNTMLNGYANNGDVEACEQ+FEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRMLIDG
Sbjct: 236 SWNTMLNGYANNGDVEACEQMFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDG 295
Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 296 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 355
Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 356 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 415
Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
GLVEEG SYFNSM+++YSITPQIEHYGCMVDLFGRAGLLDRAI+FVKRMPMEADAVIWAA
Sbjct: 416 GLVEEGTSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAA 475
Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
LLGACRIYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTG
Sbjct: 476 LLGACRIYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGC 535
Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVLKGLMKLLRSFGYEP IMELQQ S
Sbjct: 536 KKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYEPNIMELQQAS 593
BLAST of Lsi08G003910 vs. ExPASy TrEMBL
Match:
A0A1S4E0Z4 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103497177 PE=4 SV=1)
HSP 1 Score: 1032.7 bits (2669), Expect = 5.4e-298
Identity = 495/538 (92.01%), Postives = 516/538 (95.91%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
MA+ARHLFDHF DPKV LWNA FRGYFH FY+EV+FLF KMKSM VRPNCFTFPLVLKS
Sbjct: 56 MAHARHLFDHFLDPKVELWNAIFRGYFHKAFYKEVVFLFGKMKSMGVRPNCFTFPLVLKS 115
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK GAF+EGEEIH EVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERNIVAW
Sbjct: 116 CAKIGAFVEGEEIHSEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVVMLERNIVAW 175
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 176 TSMISGYILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTM 235
Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
SWNTMLNGYANNGDVEACEQ+FEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRMLIDG
Sbjct: 236 SWNTMLNGYANNGDVEACEQMFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDG 295
Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 296 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 355
Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 356 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 415
Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
GLVEEG SYFNSM+++YSITPQIEHYGCMVDLFGRAGLLDRAI+FVKRMPMEADAVIWAA
Sbjct: 416 GLVEEGTSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAA 475
Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
LLGACRIYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTG
Sbjct: 476 LLGACRIYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGC 535
Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVLKGLMKLLRSFGYEP IMELQQ S
Sbjct: 536 KKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYEPNIMELQQAS 593
BLAST of Lsi08G003910 vs. ExPASy TrEMBL
Match:
A0A5D3BGP3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00310 PE=4 SV=1)
HSP 1 Score: 1030.0 bits (2662), Expect = 3.5e-297
Identity = 494/536 (92.16%), Postives = 514/536 (95.90%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
MA+ARHLFDHF DPKV LWNA FRGYFH FYREV+FLF KMKSM VRPNCFTFPLVLKS
Sbjct: 56 MAHARHLFDHFVDPKVELWNAIFRGYFHKAFYREVVFLFGKMKSMGVRPNCFTFPLVLKS 115
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK GAF+EGEEIHCEVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERNIVAW
Sbjct: 116 CAKIGAFVEGEEIHCEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVGMLERNIVAW 175
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 176 TSMISGYILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTM 235
Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
SWNTMLNGYANNGDVEACEQLFEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRMLIDG
Sbjct: 236 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDG 295
Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 296 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 355
Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 356 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 415
Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
GLVEEG SYFNSM+++YSI PQIEHYGCMVDLFGRAGLLDRAI+FVKRMPMEADAVIWAA
Sbjct: 416 GLVEEGTSYFNSMVNEYSIKPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAA 475
Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
LLGACRIYKN+DLAELALQKLI LEPKN ANYV+LSNIYGDLGRWKDVARLKIL+RDTGS
Sbjct: 476 LLGACRIYKNLDLAELALQKLILLEPKNTANYVLLSNIYGDLGRWKDVARLKILIRDTGS 535
Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQ 537
KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVL GLMKLLRSFGYEP IMELQQ
Sbjct: 536 KKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLNGLMKLLRSFGYEPNIMELQQ 591
BLAST of Lsi08G003910 vs. ExPASy TrEMBL
Match:
A0A6J1FDD3 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444727 PE=4 SV=1)
HSP 1 Score: 1027.7 bits (2656), Expect = 1.7e-296
Identity = 492/537 (91.62%), Postives = 510/537 (94.97%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
M YARHLFDHFPDPK+ALWNATFRGY NEFYREVIFL KMKSMDVRPNCFTFPLVLKS
Sbjct: 1 MDYARHLFDHFPDPKLALWNATFRGYVRNEFYREVIFLSGKMKSMDVRPNCFTFPLVLKS 60
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK AF+EGE+IHCEVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERN+VAW
Sbjct: 61 CAKISAFVEGEQIHCEVIKGGFEGNQFVATTLIDVYSVGRAIGSAYKVFVGMLERNVVAW 120
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
TSMISGYILCNDV ARRLFDLAPERD+VLWNIMVSGYI IG+M AARKLFD MP RD M
Sbjct: 121 TSMISGYILCNDVVFARRLFDLAPERDVVLWNIMVSGYIEIGDMGAARKLFDAMPYRDVM 180
Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
SWNTMLNGYANNGD+EACEQLFEEMP+RNVFSWNGLIG YAH G FFEVL CFKRMLIDG
Sbjct: 181 SWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGAYAHKGCFFEVLGCFKRMLIDG 240
Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 300
Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
MEVFGSMD KD+ITWNSVICGLATHGCGADAL LFHQMKITG KPDGITFIGVLCSCTHL
Sbjct: 301 MEVFGSMDSKDVITWNSVICGLATHGCGADALNLFHQMKITGVKPDGITFIGVLCSCTHL 360
Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
GLVEEGISYFNSM+HDYSI PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA
Sbjct: 361 GLVEEGISYFNSMVHDYSIVPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
LLGACRI+KNIDL ELALQKLIQLEPKNPANYVMLSNIYGD+GRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIHKNIDLGELALQKLIQLEPKNPANYVMLSNIYGDVGRWKDVARLKILMRDTGS 480
Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQG 538
KKLPGCSLIEVNDSVV+FYSLDERHS+S+EIYGVLKGLMKLLRSFGYEP IMEL QG
Sbjct: 481 KKLPGCSLIEVNDSVVEFYSLDERHSESEEIYGVLKGLMKLLRSFGYEPNIMELLQG 537
BLAST of Lsi08G003910 vs. NCBI nr
Match:
XP_038886719.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 1067.4 bits (2759), Expect = 4.1e-308
Identity = 511/538 (94.98%), Postives = 525/538 (97.58%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLF KMKSMDVRPNCFTFPLVLKS
Sbjct: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFAKMKSMDVRPNCFTFPLVLKS 60
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK AF+EGEEIHCEVIKGGFEGNQFVATTLIDVYSGGR IGSAYKVFV MLERNIVAW
Sbjct: 61 CAKIRAFVEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRVIGSAYKVFVGMLERNIVAW 120
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
TSMISGYILCNDVALARRLFDLAPERD+VLWNIMVSGYI IG+MEAARKLFDTMP RDTM
Sbjct: 121 TSMISGYILCNDVALARRLFDLAPERDVVLWNIMVSGYIEIGDMEAARKLFDTMPYRDTM 180
Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
SWNTML+GYANNGDVEACE+LFEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRML D
Sbjct: 181 SWNTMLSGYANNGDVEACEKLFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLTDA 240
Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
+VVPNDATLVTVLSACARLGALDLGKWVH+YAATIG+KGN+YVGNALIDMYSKCGVIENA
Sbjct: 241 VVVPNDATLVTVLSACARLGALDLGKWVHIYAATIGFKGNIYVGNALIDMYSKCGVIENA 300
Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
MEVFGSMDLKDLITWNSVICGLAT+GCG DAL LFHQMKITGEKPDGITFIGVLCSCTHL
Sbjct: 301 MEVFGSMDLKDLITWNSVICGLATNGCGVDALNLFHQMKITGEKPDGITFIGVLCSCTHL 360
Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
GLVEEGISYFNSM+HDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA
Sbjct: 361 GLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
KK+PGCSLIEVNDSVV+FYSLDERHSQSKEIYGVLKGLMKLLRSFGYEP IMELQQGS
Sbjct: 481 KKMPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIMELQQGS 538
BLAST of Lsi08G003910 vs. NCBI nr
Match:
XP_011656468.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sativus] >KGN45892.1 hypothetical protein Csa_005743 [Cucumis sativus])
HSP 1 Score: 1040.4 bits (2689), Expect = 5.3e-300
Identity = 499/538 (92.75%), Postives = 518/538 (96.28%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
MA+ARHLFDHFPDPKV LWNA RGYFHN FYREV+FLF KMKSMDVRPNCFTFPLVLKS
Sbjct: 1 MAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKS 60
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK GAF+EGEEIHCEVIKGG EGNQFVATTLIDVYSGGRAIGSAYK+FV MLERNIVAW
Sbjct: 61 CAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAW 120
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 121 TSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTM 180
Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
SWNTMLNGYANNGDVEACEQLFEEMP+RNVFSWNGLIGGYAHNG FFEVL CFKRMLIDG
Sbjct: 181 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 240
Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCG+IENA
Sbjct: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 300
Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 301 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 360
Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
GLVEEG SYFNSM+++YSI PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA
Sbjct: 361 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
LLGACRIYKNIDLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGS 480
Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
KKLPGCSLIEVNDSVV+FYSLDERHSQSKEIYGVLKGLMKLLRSFGYEP +MEL QGS
Sbjct: 481 KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNMMELLQGS 538
BLAST of Lsi08G003910 vs. NCBI nr
Match:
XP_016901901.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucumis melo] >KAA0061615.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1032.7 bits (2669), Expect = 1.1e-297
Identity = 495/538 (92.01%), Postives = 516/538 (95.91%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
MA+ARHLFDHF DPKV LWNA FRGYFH FY+EV+FLF KMKSM VRPNCFTFPLVLKS
Sbjct: 56 MAHARHLFDHFLDPKVELWNAIFRGYFHKAFYKEVVFLFGKMKSMGVRPNCFTFPLVLKS 115
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK GAF+EGEEIH EVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERNIVAW
Sbjct: 116 CAKIGAFVEGEEIHSEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVVMLERNIVAW 175
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 176 TSMISGYILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTM 235
Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
SWNTMLNGYANNGDVEACEQ+FEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRMLIDG
Sbjct: 236 SWNTMLNGYANNGDVEACEQMFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDG 295
Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 296 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 355
Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 356 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 415
Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
GLVEEG SYFNSM+++YSITPQIEHYGCMVDLFGRAGLLDRAI+FVKRMPMEADAVIWAA
Sbjct: 416 GLVEEGTSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAA 475
Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
LLGACRIYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTG
Sbjct: 476 LLGACRIYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGC 535
Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVLKGLMKLLRSFGYEP IMELQQ S
Sbjct: 536 KKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYEPNIMELQQAS 593
BLAST of Lsi08G003910 vs. NCBI nr
Match:
XP_023549948.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1030.8 bits (2664), Expect = 4.2e-297
Identity = 493/537 (91.81%), Postives = 511/537 (95.16%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
M YARHLFDHFPDPK+ALWNATFRGY NEFYREVIFL KMKSMDVRPNCFTFPLVLKS
Sbjct: 1 MDYARHLFDHFPDPKLALWNATFRGYVRNEFYREVIFLSGKMKSMDVRPNCFTFPLVLKS 60
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK AF+EGE+IHCEVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERN+VAW
Sbjct: 61 CAKISAFVEGEQIHCEVIKGGFEGNQFVATTLIDVYSVGRAIGSAYKVFVGMLERNVVAW 120
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
TSMISGYILCNDV ARRLFDLAPERD+VLWNIMVSGYI IG+M AARKLFD MP RD M
Sbjct: 121 TSMISGYILCNDVVFARRLFDLAPERDVVLWNIMVSGYIEIGDMAAARKLFDAMPYRDVM 180
Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
SWNTMLNGYANNGD+EACEQLFEEMP+RNVFSWNGLIG YAH G FFEVL CFKRMLIDG
Sbjct: 181 SWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGAYAHKGCFFEVLGCFKRMLIDG 240
Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 300
Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
MEVFGSMD KD+ITWNSVICGLATHGCGADAL LFHQMK+TGEKPDGITFIGVLCSCTHL
Sbjct: 301 MEVFGSMDSKDVITWNSVICGLATHGCGADALNLFHQMKMTGEKPDGITFIGVLCSCTHL 360
Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
GLVEEGISYFNSM+HDYSI PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA
Sbjct: 361 GLVEEGISYFNSMVHDYSIVPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
LLGACRI+KNIDL ELALQKLIQLEPKNPANYVMLSNIYGD+GRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIHKNIDLGELALQKLIQLEPKNPANYVMLSNIYGDVGRWKDVARLKILMRDTGS 480
Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQG 538
KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVLKGLMKLLRSFGYEP IMEL QG
Sbjct: 481 KKLPGCSLIEVNDSVVEFYSLDERHSQSEEIYGVLKGLMKLLRSFGYEPNIMELLQG 537
BLAST of Lsi08G003910 vs. NCBI nr
Match:
TYJ97821.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1030.0 bits (2662), Expect = 7.2e-297
Identity = 494/536 (92.16%), Postives = 514/536 (95.90%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
MA+ARHLFDHF DPKV LWNA FRGYFH FYREV+FLF KMKSM VRPNCFTFPLVLKS
Sbjct: 56 MAHARHLFDHFVDPKVELWNAIFRGYFHKAFYREVVFLFGKMKSMGVRPNCFTFPLVLKS 115
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK GAF+EGEEIHCEVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERNIVAW
Sbjct: 116 CAKIGAFVEGEEIHCEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVGMLERNIVAW 175
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 176 TSMISGYILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTM 235
Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
SWNTMLNGYANNGDVEACEQLFEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRMLIDG
Sbjct: 236 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDG 295
Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 296 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 355
Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 356 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 415
Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
GLVEEG SYFNSM+++YSI PQIEHYGCMVDLFGRAGLLDRAI+FVKRMPMEADAVIWAA
Sbjct: 416 GLVEEGTSYFNSMVNEYSIKPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAA 475
Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
LLGACRIYKN+DLAELALQKLI LEPKN ANYV+LSNIYGDLGRWKDVARLKIL+RDTGS
Sbjct: 476 LLGACRIYKNLDLAELALQKLILLEPKNTANYVLLSNIYGDLGRWKDVARLKILIRDTGS 535
Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQ 537
KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVL GLMKLLRSFGYEP IMELQQ
Sbjct: 536 KKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLNGLMKLLRSFGYEPNIMELQQ 591
BLAST of Lsi08G003910 vs. TAIR 10
Match:
AT1G13410.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 575.1 bits (1481), Expect = 5.9e-164
Identity = 266/418 (63.64%), Postives = 334/418 (79.90%), Query Frame = 0
Query: 102 IGSAYKVFVEMLERNIVAWTSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGI 161
I SA KVF EM+E+N+V WTSMI+GY+L D+ ARR FDL+PERDIVLWN M+SGYI +
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEM 103
Query: 162 GNMEAARKLFDTMPCRDTMSWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYA 221
GNM AR LFD MPCRD MSWNT+L GYAN GD+EACE++F++MP+RNVFSWNGLI GYA
Sbjct: 104 GNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYA 163
Query: 222 HNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGY-KGN 281
NGR EVL FKRM+ +G VVPNDAT+ VLSACA+LGA D GKWVH Y T+GY K +
Sbjct: 164 QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD 223
Query: 282 VYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKI 341
V V NALIDMY KCG IE AMEVF + +DLI+WN++I GLA HG G +AL LFH+MK
Sbjct: 224 VNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKN 283
Query: 342 TGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLD 401
+G PD +TF+GVLC+C H+GLVE+G++YFNSM D+SI P+IEH GC+VDL RAG L
Sbjct: 284 SGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLT 343
Query: 402 RAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYG 461
+A+EF+ +MP++ADAVIWA LLGA ++YK +D+ E+AL++LI+LEP+NPAN+VMLSNIYG
Sbjct: 344 QAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYG 403
Query: 462 DLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGL 519
D GR+ D ARLK+ MRDTG KK G S IE +D +V+FYS E+H +++E+ +L+ L
Sbjct: 404 DAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
BLAST of Lsi08G003910 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 443.4 bits (1139), Expect = 2.7e-124
Identity = 228/577 (39.51%), Postives = 340/577 (58.93%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
+ YA +F +P + +WN FRG+ + + L+ M S+ + PN +TFP VLKS
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 61 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
CAK+ AF EG++IH V+K G + + +V T+LI +Y + A+KVF + R++V++
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTM------ 180
T++I GY + A++LFD P +D+V WN M+SGY GN + A +LF M
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 181 PCRDTM--------------------SW-------------NTMLNGYANNGDVEACEQL 240
P TM W N +++ Y+ G++E L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 241 FEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLGA 300
FE +P ++V SWN LIGGY H + E L F+ ML G PND T++++L ACA LGA
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHLGA 383
Query: 301 LDLGKWVHVY--AATIGYKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVI 360
+D+G+W+HVY G + +LIDMY+KCG IE A +VF S+ K L +WN++I
Sbjct: 384 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 443
Query: 361 CGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSI 420
G A HG + LF +M+ G +PD ITF+G+L +C+H G+++ G F +M DY +
Sbjct: 444 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 503
Query: 421 TPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQ 480
TP++EHYGCM+DL G +GL A E + M ME D VIW +LL AC+++ N++L E +
Sbjct: 504 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 563
Query: 481 KLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFY 537
LI++EP+NP +YV+LSNIY GRW +VA+ + L+ D G KK+PGCS IE++ V +F
Sbjct: 564 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 623
BLAST of Lsi08G003910 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 439.9 bits (1130), Expect = 3.0e-123
Identity = 218/576 (37.85%), Postives = 334/576 (57.99%), Query Frame = 0
Query: 1 MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKS-MDVRPNCFTFPLVLK 60
+ YAR +FD P P WN R Y I+ F M S PN +TFP ++K
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 61 SCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVA 120
+ A+ + G+ +H +K + FVA +LI Y + SA KVF + E+++V+
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 121 WTSMISGYILCNDVALARRLFDLAPERDI------------------------------- 180
W SMI+G++ A LF D+
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 181 --------VLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMSWNTMLNGYANNGDVEACEQ 240
L N M+ Y G++E A++LFD M +D ++W TML+GYA + D EA +
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 241 LFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLG 300
+ MP +++ +WN LI Y NG+ E L F + + + N TLV+ LSACA++G
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 301 ALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVIC 360
AL+LG+W+H Y G + N +V +ALI MYSKCG +E + EVF S++ +D+ W+++I
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 361 GLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSIT 420
GLA HGCG +A+ +F++M+ KP+G+TF V C+C+H GLV+E S F+ M +Y I
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 421 PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQK 480
P+ +HY C+VD+ GR+G L++A++F++ MP+ +W ALLGAC+I+ N++LAE+A +
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTR 559
Query: 481 LIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFYS 537
L++LEP+N +V+LSNIY LG+W++V+ L+ MR TG KK PGCS IE++ + +F S
Sbjct: 560 LLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 619
BLAST of Lsi08G003910 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 425.2 bits (1092), Expect = 7.6e-119
Identity = 208/521 (39.92%), Postives = 314/521 (60.27%), Query Frame = 0
Query: 4 ARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKSCAK 63
A +F+ +P V L N+ R + N + F+F +M+ + + FT+P +LK+C+
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 64 NGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYS--GGRAIGSAYKVFVEMLERNIVAWT 123
+ +H + K G + +V LID YS GG + A K+F +M ER+ V+W
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 124 SMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMS 183
SM+ G + ++ ARRLFD P+RD++ WN M+ GY M A +LF+ MP R+T+S
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249
Query: 184 WNTMLNGYANNGDVEACEQLFEEM--PDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLID 243
W+TM+ GY+ GD+E +F++M P +NV +W +I GYA G E +M+
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 244 GLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIEN 303
GL + A ++++L+AC G L LG +H N YV NAL+DMY+KCG ++
Sbjct: 310 GLKF-DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 369
Query: 304 AMEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTH 363
A +VF + KDL++WN+++ GL HG G +A+ LF +M+ G +PD +TFI VLCSC H
Sbjct: 370 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 429
Query: 364 LGLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWA 423
GL++EGI YF SM Y + PQ+EHYGC+VDL GR G L AI+ V+ MPME + VIW
Sbjct: 430 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 489
Query: 424 ALLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTG 483
ALLGACR++ +D+A+ L L++L+P +P NY +LSNIY W+ VA ++ M+ G
Sbjct: 490 ALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 549
Query: 484 SKKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMK 521
+K G S +E+ D + +F D+ H +S +IY +L L++
Sbjct: 550 VEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
BLAST of Lsi08G003910 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 411.4 bits (1056), Expect = 1.1e-114
Identity = 214/525 (40.76%), Postives = 298/525 (56.76%), Query Frame = 0
Query: 4 ARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKSCAK 63
AR +FD P+ WNA Y N E LF KS + + LV +C
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF---KSRE------NWALVSWNCLL 235
Query: 64 NGAFLEGEEIHCEVIKGGFEGNQFVA-TTLIDVYSGGRAIGSAYKVFVEMLERNIVAWTS 123
G + + + V+ T+I Y+ I A ++F E +++ WT+
Sbjct: 236 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 295
Query: 124 MISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMSW 183
M+SGYI V AR LFD PER+ V WN M++GY+ ME A++LFD MPCR+ +W
Sbjct: 296 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 355
Query: 184 NTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLV 243
NTM+ GYA G + + LF++MP R+ SW +I GY+ +G FE L F +M +G
Sbjct: 356 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 415
Query: 244 VPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENAME 303
+ N ++ + LS CA + AL+LGK +H GY+ +VGNAL+ MY KCG IE A +
Sbjct: 416 L-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 475
Query: 304 VFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGL 363
+F M KD+++WN++I G + HG G AL F MK G KPD T + VL +C+H GL
Sbjct: 476 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 535
Query: 364 VEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 423
V++G YF +M DY + P +HY CMVDL GRAGLL+ A +K MP E DA IW LL
Sbjct: 536 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 595
Query: 424 GACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKK 483
GA R++ N +LAE A K+ +EP+N YV+LSN+Y GRW DV +L++ MRD G KK
Sbjct: 596 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 655
Query: 484 LPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 528
+PG S IE+ + F DE H + EI+ L+ L ++ GY
Sbjct: 656 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGY 690
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LN01 | 3.8e-123 | 39.51 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O82380 | 4.2e-122 | 37.85 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LS72 | 1.1e-117 | 39.92 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9SY02 | 1.6e-113 | 40.76 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
Q1PEU4 | 7.4e-111 | 40.04 | Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KBY4 | 2.6e-300 | 92.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017080 PE=4 SV=1 | [more] |
A0A5A7V6Y9 | 5.4e-298 | 92.01 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4E0Z4 | 5.4e-298 | 92.01 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
A0A5D3BGP3 | 3.5e-297 | 92.16 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1FDD3 | 1.7e-296 | 91.62 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
XP_038886719.1 | 4.1e-308 | 94.98 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Benin... | [more] |
XP_011656468.1 | 5.3e-300 | 92.75 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sa... | [more] |
XP_016901901.1 | 1.1e-297 | 92.01 | PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... | [more] |
XP_023549948.1 | 4.2e-297 | 91.81 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
TYJ97821.1 | 7.2e-297 | 92.16 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT1G13410.1 | 5.9e-164 | 63.64 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 2.7e-124 | 39.51 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 3.0e-123 | 37.85 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G29230.1 | 7.6e-119 | 39.92 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G02750.1 | 1.1e-114 | 40.76 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |