Lsi08G003910 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G003910
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr08: 10862955 .. 10864571 (-)
RNA-Seq ExpressionLsi08G003910
SyntenyLsi08G003910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTATGCCCGCCATCTGTTCGATCATTTTCCTGACCCAAAAGTAGCTCTTTGGAATGCAACTTTCAGAGGGTATTTCCATAACGAGTTTTACAGGGAAGTTATTTTCTTATTTTGGAAAATGAAGAGCATGGACGTGAGACCCAACTGCTTCACGTTCCCTCTTGTCCTCAAATCTTGTGCGAAGAACGGTGCCTTTTTGGAAGGTGAAGAGATACATTGTGAGGTGATTAAGGGAGGGTTTGAAGGGAACCAATTCGTGGCTACTACGCTGATCGATGTGTATTCTGGTGGGAGGGCGATTGGGTCTGCGTACAAGGTGTTTGTTGAAATGCTCGAGAGAAATATAGTTGCTTGGACTTCCATGATTAGTGGCTACATTTTGTGTAATGATGTGGCACTTGCTCGCCGACTTTTTGATTTGGCACCAGAACGGGATATTGTCCTGTGGAACATTATGGTTTCTGGTTATATTGGAATAGGGAATATGGAAGCTGCCAGAAAGCTGTTTGATACAATGCCATGCCGAGATACGATGTCTTGGAATACAATGTTGAATGGTTATGCAAATAATGGGGACGTTGAGGCTTGTGAGCAGCTGTTTGAAGAGATGCCTGACCGGAATGTTTTCTCCTGGAATGGATTGATTGGAGGATATGCTCATAATGGGCGTTTCTTTGAAGTATTGAGTTGTTTCAAACGAATGCTAATCGATGGGCTTGTTGTTCCTAATGATGCTACCCTTGTCACTGTGCTATCCGCTTGTGCAAGATTAGGAGCTCTTGACTTGGGAAAGTGGGTGCATGTATATGCTGCGACGATCGGGTATAAAGGAAATGTTTATGTTGGAAACGCATTGATAGACATGTATTCAAAATGTGGTGTAATAGAGAATGCAATGGAAGTTTTTGGAAGCATGGATTTAAAGGACCTTATTACTTGGAACTCTGTAATTTGTGGCTTGGCAACTCATGGATGTGGGGCAGATGCATTAACCTTGTTTCACCAGATGAAGATCACTGGCGAAAAACCCGATGGAATCACTTTCATTGGGGTGTTGTGCTCCTGTACCCATCTTGGGTTAGTTGAAGAAGGCATCTCTTATTTCAACTCAATGATCCATGACTACTCAATTACGCCTCAGATTGAGCATTATGGTTGTATGGTTGATCTATTTGGCCGAGCTGGTCTTTTGGACCGAGCAATTGAGTTTGTGAAGAGGATGCCAATGGAAGCAGATGCTGTCATCTGGGCTGCTCTACTAGGTGCATGCAGGATTTACAAAAACATAGATCTGGCTGAGTTAGCTCTTCAAAAACTCATTCAGCTTGAACCCAAAAACCCTGCAAACTATGTCATGCTATCAAATATCTACGGAGATCTTGGTAGATGGAAAGATGTTGCACGGTTGAAGATTTTAATGAGGGATACCGGGTCCAAAAAATTGCCAGGATGTAGCTTGATTGAGGTGAATGATAGCGTGGTTCAATTTTATTCCTTAGATGAGAGGCATTCTCAGAGCAAGGAAATCTATGGAGTTTTAAAGGGGTTGATGAAATTGTTAAGATCATTTGGGTATGAACCAATTATTATGGAACTCCAGCAAGGATCATGA

mRNA sequence

ATGGCTTATGCCCGCCATCTGTTCGATCATTTTCCTGACCCAAAAGTAGCTCTTTGGAATGCAACTTTCAGAGGGTATTTCCATAACGAGTTTTACAGGGAAGTTATTTTCTTATTTTGGAAAATGAAGAGCATGGACGTGAGACCCAACTGCTTCACGTTCCCTCTTGTCCTCAAATCTTGTGCGAAGAACGGTGCCTTTTTGGAAGGTGAAGAGATACATTGTGAGGTGATTAAGGGAGGGTTTGAAGGGAACCAATTCGTGGCTACTACGCTGATCGATGTGTATTCTGGTGGGAGGGCGATTGGGTCTGCGTACAAGGTGTTTGTTGAAATGCTCGAGAGAAATATAGTTGCTTGGACTTCCATGATTAGTGGCTACATTTTGTGTAATGATGTGGCACTTGCTCGCCGACTTTTTGATTTGGCACCAGAACGGGATATTGTCCTGTGGAACATTATGGTTTCTGGTTATATTGGAATAGGGAATATGGAAGCTGCCAGAAAGCTGTTTGATACAATGCCATGCCGAGATACGATGTCTTGGAATACAATGTTGAATGGTTATGCAAATAATGGGGACGTTGAGGCTTGTGAGCAGCTGTTTGAAGAGATGCCTGACCGGAATGTTTTCTCCTGGAATGGATTGATTGGAGGATATGCTCATAATGGGCGTTTCTTTGAAGTATTGAGTTGTTTCAAACGAATGCTAATCGATGGGCTTGTTGTTCCTAATGATGCTACCCTTGTCACTGTGCTATCCGCTTGTGCAAGATTAGGAGCTCTTGACTTGGGAAAGTGGGTGCATGTATATGCTGCGACGATCGGGTATAAAGGAAATGTTTATGTTGGAAACGCATTGATAGACATGTATTCAAAATGTGGTGTAATAGAGAATGCAATGGAAGTTTTTGGAAGCATGGATTTAAAGGACCTTATTACTTGGAACTCTGTAATTTGTGGCTTGGCAACTCATGGATGTGGGGCAGATGCATTAACCTTGTTTCACCAGATGAAGATCACTGGCGAAAAACCCGATGGAATCACTTTCATTGGGGTGTTGTGCTCCTGTACCCATCTTGGGTTAGTTGAAGAAGGCATCTCTTATTTCAACTCAATGATCCATGACTACTCAATTACGCCTCAGATTGAGCATTATGGTTGTATGGTTGATCTATTTGGCCGAGCTGGTCTTTTGGACCGAGCAATTGAGTTTGTGAAGAGGATGCCAATGGAAGCAGATGCTGTCATCTGGGCTGCTCTACTAGGTGCATGCAGGATTTACAAAAACATAGATCTGGCTGAGTTAGCTCTTCAAAAACTCATTCAGCTTGAACCCAAAAACCCTGCAAACTATGTCATGCTATCAAATATCTACGGAGATCTTGGTAGATGGAAAGATGTTGCACGGTTGAAGATTTTAATGAGGGATACCGGGTCCAAAAAATTGCCAGGATGTAGCTTGATTGAGGTGAATGATAGCGTGGTTCAATTTTATTCCTTAGATGAGAGGCATTCTCAGAGCAAGGAAATCTATGGAGTTTTAAAGGGGTTGATGAAATTGTTAAGATCATTTGGGTATGAACCAATTATTATGGAACTCCAGCAAGGATCATGA

Coding sequence (CDS)

ATGGCTTATGCCCGCCATCTGTTCGATCATTTTCCTGACCCAAAAGTAGCTCTTTGGAATGCAACTTTCAGAGGGTATTTCCATAACGAGTTTTACAGGGAAGTTATTTTCTTATTTTGGAAAATGAAGAGCATGGACGTGAGACCCAACTGCTTCACGTTCCCTCTTGTCCTCAAATCTTGTGCGAAGAACGGTGCCTTTTTGGAAGGTGAAGAGATACATTGTGAGGTGATTAAGGGAGGGTTTGAAGGGAACCAATTCGTGGCTACTACGCTGATCGATGTGTATTCTGGTGGGAGGGCGATTGGGTCTGCGTACAAGGTGTTTGTTGAAATGCTCGAGAGAAATATAGTTGCTTGGACTTCCATGATTAGTGGCTACATTTTGTGTAATGATGTGGCACTTGCTCGCCGACTTTTTGATTTGGCACCAGAACGGGATATTGTCCTGTGGAACATTATGGTTTCTGGTTATATTGGAATAGGGAATATGGAAGCTGCCAGAAAGCTGTTTGATACAATGCCATGCCGAGATACGATGTCTTGGAATACAATGTTGAATGGTTATGCAAATAATGGGGACGTTGAGGCTTGTGAGCAGCTGTTTGAAGAGATGCCTGACCGGAATGTTTTCTCCTGGAATGGATTGATTGGAGGATATGCTCATAATGGGCGTTTCTTTGAAGTATTGAGTTGTTTCAAACGAATGCTAATCGATGGGCTTGTTGTTCCTAATGATGCTACCCTTGTCACTGTGCTATCCGCTTGTGCAAGATTAGGAGCTCTTGACTTGGGAAAGTGGGTGCATGTATATGCTGCGACGATCGGGTATAAAGGAAATGTTTATGTTGGAAACGCATTGATAGACATGTATTCAAAATGTGGTGTAATAGAGAATGCAATGGAAGTTTTTGGAAGCATGGATTTAAAGGACCTTATTACTTGGAACTCTGTAATTTGTGGCTTGGCAACTCATGGATGTGGGGCAGATGCATTAACCTTGTTTCACCAGATGAAGATCACTGGCGAAAAACCCGATGGAATCACTTTCATTGGGGTGTTGTGCTCCTGTACCCATCTTGGGTTAGTTGAAGAAGGCATCTCTTATTTCAACTCAATGATCCATGACTACTCAATTACGCCTCAGATTGAGCATTATGGTTGTATGGTTGATCTATTTGGCCGAGCTGGTCTTTTGGACCGAGCAATTGAGTTTGTGAAGAGGATGCCAATGGAAGCAGATGCTGTCATCTGGGCTGCTCTACTAGGTGCATGCAGGATTTACAAAAACATAGATCTGGCTGAGTTAGCTCTTCAAAAACTCATTCAGCTTGAACCCAAAAACCCTGCAAACTATGTCATGCTATCAAATATCTACGGAGATCTTGGTAGATGGAAAGATGTTGCACGGTTGAAGATTTTAATGAGGGATACCGGGTCCAAAAAATTGCCAGGATGTAGCTTGATTGAGGTGAATGATAGCGTGGTTCAATTTTATTCCTTAGATGAGAGGCATTCTCAGAGCAAGGAAATCTATGGAGTTTTAAAGGGGTTGATGAAATTGTTAAGATCATTTGGGTATGAACCAATTATTATGGAACTCCAGCAAGGATCATGA

Protein sequence

MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKSCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAWTSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMSWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS
Homology
BLAST of Lsi08G003910 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 3.8e-123
Identity = 228/577 (39.51%), Postives = 340/577 (58.93%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           + YA  +F    +P + +WN  FRG+  +      + L+  M S+ + PN +TFP VLKS
Sbjct: 84  LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK+ AF EG++IH  V+K G + + +V T+LI +Y     +  A+KVF +   R++V++
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTM------ 180
           T++I GY     +  A++LFD  P +D+V WN M+SGY   GN + A +LF  M      
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263

Query: 181 PCRDTM--------------------SW-------------NTMLNGYANNGDVEACEQL 240
           P   TM                     W             N +++ Y+  G++E    L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323

Query: 241 FEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLGA 300
           FE +P ++V SWN LIGGY H   + E L  F+ ML  G   PND T++++L ACA LGA
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHLGA 383

Query: 301 LDLGKWVHVY--AATIGYKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVI 360
           +D+G+W+HVY      G      +  +LIDMY+KCG IE A +VF S+  K L +WN++I
Sbjct: 384 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 443

Query: 361 CGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSI 420
            G A HG    +  LF +M+  G +PD ITF+G+L +C+H G+++ G   F +M  DY +
Sbjct: 444 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 503

Query: 421 TPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQ 480
           TP++EHYGCM+DL G +GL   A E +  M ME D VIW +LL AC+++ N++L E   +
Sbjct: 504 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 563

Query: 481 KLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFY 537
            LI++EP+NP +YV+LSNIY   GRW +VA+ + L+ D G KK+PGCS IE++  V +F 
Sbjct: 564 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 623

BLAST of Lsi08G003910 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 4.2e-122
Identity = 218/576 (37.85%), Postives = 334/576 (57.99%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKS-MDVRPNCFTFPLVLK 60
           + YAR +FD  P P    WN   R Y         I+ F  M S     PN +TFP ++K
Sbjct: 80  LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139

Query: 61  SCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVA 120
           + A+  +   G+ +H   +K     + FVA +LI  Y     + SA KVF  + E+++V+
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199

Query: 121 WTSMISGYILCNDVALARRLFDLAPERDI------------------------------- 180
           W SMI+G++       A  LF      D+                               
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259

Query: 181 --------VLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMSWNTMLNGYANNGDVEACEQ 240
                    L N M+  Y   G++E A++LFD M  +D ++W TML+GYA + D EA  +
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319

Query: 241 LFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLG 300
           +   MP +++ +WN LI  Y  NG+  E L  F  + +   +  N  TLV+ LSACA++G
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379

Query: 301 ALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVIC 360
           AL+LG+W+H Y    G + N +V +ALI MYSKCG +E + EVF S++ +D+  W+++I 
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439

Query: 361 GLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSIT 420
           GLA HGCG +A+ +F++M+    KP+G+TF  V C+C+H GLV+E  S F+ M  +Y I 
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499

Query: 421 PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQK 480
           P+ +HY C+VD+ GR+G L++A++F++ MP+     +W ALLGAC+I+ N++LAE+A  +
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTR 559

Query: 481 LIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFYS 537
           L++LEP+N   +V+LSNIY  LG+W++V+ L+  MR TG KK PGCS IE++  + +F S
Sbjct: 560 LLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 619

BLAST of Lsi08G003910 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.1e-117
Identity = 208/521 (39.92%), Postives = 314/521 (60.27%), Query Frame = 0

Query: 4   ARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKSCAK 63
           A  +F+   +P V L N+  R +  N    +  F+F +M+   +  + FT+P +LK+C+ 
Sbjct: 70  AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129

Query: 64  NGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYS--GGRAIGSAYKVFVEMLERNIVAWT 123
                  + +H  + K G   + +V   LID YS  GG  +  A K+F +M ER+ V+W 
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189

Query: 124 SMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMS 183
           SM+ G +   ++  ARRLFD  P+RD++ WN M+ GY     M  A +LF+ MP R+T+S
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249

Query: 184 WNTMLNGYANNGDVEACEQLFEEM--PDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLID 243
           W+TM+ GY+  GD+E    +F++M  P +NV +W  +I GYA  G   E      +M+  
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309

Query: 244 GLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIEN 303
           GL   + A ++++L+AC   G L LG  +H          N YV NAL+DMY+KCG ++ 
Sbjct: 310 GLKF-DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 369

Query: 304 AMEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTH 363
           A +VF  +  KDL++WN+++ GL  HG G +A+ LF +M+  G +PD +TFI VLCSC H
Sbjct: 370 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 429

Query: 364 LGLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWA 423
            GL++EGI YF SM   Y + PQ+EHYGC+VDL GR G L  AI+ V+ MPME + VIW 
Sbjct: 430 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 489

Query: 424 ALLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTG 483
           ALLGACR++  +D+A+  L  L++L+P +P NY +LSNIY     W+ VA ++  M+  G
Sbjct: 490 ALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 549

Query: 484 SKKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMK 521
            +K  G S +E+ D + +F   D+ H +S +IY +L  L++
Sbjct: 550 VEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589

BLAST of Lsi08G003910 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 1.6e-113
Identity = 214/525 (40.76%), Postives = 298/525 (56.76%), Query Frame = 0

Query: 4   ARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKSCAK 63
           AR +FD  P+     WNA    Y  N    E   LF   KS +       + LV  +C  
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF---KSRE------NWALVSWNCLL 235

Query: 64  NGAFLEGEEIHCEVIKGGFEGNQFVA-TTLIDVYSGGRAIGSAYKVFVEMLERNIVAWTS 123
            G   + + +              V+  T+I  Y+    I  A ++F E   +++  WT+
Sbjct: 236 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 295

Query: 124 MISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMSW 183
           M+SGYI    V  AR LFD  PER+ V WN M++GY+    ME A++LFD MPCR+  +W
Sbjct: 296 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 355

Query: 184 NTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLV 243
           NTM+ GYA  G +   + LF++MP R+  SW  +I GY+ +G  FE L  F +M  +G  
Sbjct: 356 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 415

Query: 244 VPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENAME 303
           + N ++  + LS CA + AL+LGK +H      GY+   +VGNAL+ MY KCG IE A +
Sbjct: 416 L-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 475

Query: 304 VFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGL 363
           +F  M  KD+++WN++I G + HG G  AL  F  MK  G KPD  T + VL +C+H GL
Sbjct: 476 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 535

Query: 364 VEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 423
           V++G  YF +M  DY + P  +HY CMVDL GRAGLL+ A   +K MP E DA IW  LL
Sbjct: 536 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 595

Query: 424 GACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKK 483
           GA R++ N +LAE A  K+  +EP+N   YV+LSN+Y   GRW DV +L++ MRD G KK
Sbjct: 596 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 655

Query: 484 LPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 528
           +PG S IE+ +    F   DE H +  EI+  L+ L   ++  GY
Sbjct: 656 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGY 690

BLAST of Lsi08G003910 vs. ExPASy Swiss-Prot
Match: Q1PEU4 (Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E9 PE=2 SV=2)

HSP 1 Score: 402.5 bits (1033), Expect = 7.4e-111
Identity = 209/522 (40.04%), Postives = 312/522 (59.77%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVA-LWNATFRGYFHNEFYREVIFLFWKM-KSMDVRPNCFTFPLVL 60
           + YAR LFD  P    + L N+  + Y     Y +   L+  + K     P+ FTF  + 
Sbjct: 26  IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85

Query: 61  KSCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIV 120
           KSC+ +    +G ++H ++ + GF  + +V+T ++D+Y+    +G A   F EM  R+ V
Sbjct: 86  KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145

Query: 121 AWTSMISGYILCNDVALARRLFDLAPE-RDIVLWNIMVSGYIGIGNMEAARKLFDTMPCR 180
           +WT++ISGYI C ++ LA +LFD  P  +D+V++N M+ G++  G+M +AR+LFD M  +
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205

Query: 181 DTMSWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRML 240
             ++W TM++GY N  D++A  +LF+ MP+RN+ SWN +IGGY  N +  E +  F+ M 
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265

Query: 241 IDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVI 300
               + P+D T+++VL A +  GAL LG+W H +         V V  A++DMYSKCG I
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325

Query: 301 ENAMEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSC 360
           E A  +F  M  K + +WN++I G A +G    AL LF  M I  EKPD IT + V+ +C
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPDEITMLAVITAC 385

Query: 361 THLGLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVI 420
            H GLVEEG  +F+ M  +  +  +IEHYGCMVDL GRAG L  A + +  MP E + +I
Sbjct: 386 NHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 445

Query: 421 WAALLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRD 480
            ++ L AC  YK+I+ AE  L+K ++LEP+N  NYV+L N+Y    RW D   +K +MR 
Sbjct: 446 LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 505

Query: 481 TGSKKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLM 520
             +KK  GCSLIE+N  V +F S D  H   + I+ VL  L+
Sbjct: 506 NQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLL 545

BLAST of Lsi08G003910 vs. ExPASy TrEMBL
Match: A0A0A0KBY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017080 PE=4 SV=1)

HSP 1 Score: 1040.4 bits (2689), Expect = 2.6e-300
Identity = 499/538 (92.75%), Postives = 518/538 (96.28%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           MA+ARHLFDHFPDPKV LWNA  RGYFHN FYREV+FLF KMKSMDVRPNCFTFPLVLKS
Sbjct: 1   MAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKS 60

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK GAF+EGEEIHCEVIKGG EGNQFVATTLIDVYSGGRAIGSAYK+FV MLERNIVAW
Sbjct: 61  CAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAW 120

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
           TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 121 TSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTM 180

Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
           SWNTMLNGYANNGDVEACEQLFEEMP+RNVFSWNGLIGGYAHNG FFEVL CFKRMLIDG
Sbjct: 181 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 240

Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
           LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCG+IENA
Sbjct: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 300

Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
           MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 301 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 360

Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
           GLVEEG SYFNSM+++YSI PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA
Sbjct: 361 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420

Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
           LLGACRIYKNIDLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGS 480

Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
           KKLPGCSLIEVNDSVV+FYSLDERHSQSKEIYGVLKGLMKLLRSFGYEP +MEL QGS
Sbjct: 481 KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNMMELLQGS 538

BLAST of Lsi08G003910 vs. ExPASy TrEMBL
Match: A0A5A7V6Y9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001800 PE=4 SV=1)

HSP 1 Score: 1032.7 bits (2669), Expect = 5.4e-298
Identity = 495/538 (92.01%), Postives = 516/538 (95.91%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           MA+ARHLFDHF DPKV LWNA FRGYFH  FY+EV+FLF KMKSM VRPNCFTFPLVLKS
Sbjct: 56  MAHARHLFDHFLDPKVELWNAIFRGYFHKAFYKEVVFLFGKMKSMGVRPNCFTFPLVLKS 115

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK GAF+EGEEIH EVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERNIVAW
Sbjct: 116 CAKIGAFVEGEEIHSEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVVMLERNIVAW 175

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
           TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 176 TSMISGYILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTM 235

Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
           SWNTMLNGYANNGDVEACEQ+FEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRMLIDG
Sbjct: 236 SWNTMLNGYANNGDVEACEQMFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDG 295

Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
           LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 296 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 355

Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
           MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 356 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 415

Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
           GLVEEG SYFNSM+++YSITPQIEHYGCMVDLFGRAGLLDRAI+FVKRMPMEADAVIWAA
Sbjct: 416 GLVEEGTSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAA 475

Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
           LLGACRIYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTG 
Sbjct: 476 LLGACRIYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGC 535

Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
           KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVLKGLMKLLRSFGYEP IMELQQ S
Sbjct: 536 KKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYEPNIMELQQAS 593

BLAST of Lsi08G003910 vs. ExPASy TrEMBL
Match: A0A1S4E0Z4 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103497177 PE=4 SV=1)

HSP 1 Score: 1032.7 bits (2669), Expect = 5.4e-298
Identity = 495/538 (92.01%), Postives = 516/538 (95.91%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           MA+ARHLFDHF DPKV LWNA FRGYFH  FY+EV+FLF KMKSM VRPNCFTFPLVLKS
Sbjct: 56  MAHARHLFDHFLDPKVELWNAIFRGYFHKAFYKEVVFLFGKMKSMGVRPNCFTFPLVLKS 115

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK GAF+EGEEIH EVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERNIVAW
Sbjct: 116 CAKIGAFVEGEEIHSEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVVMLERNIVAW 175

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
           TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 176 TSMISGYILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTM 235

Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
           SWNTMLNGYANNGDVEACEQ+FEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRMLIDG
Sbjct: 236 SWNTMLNGYANNGDVEACEQMFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDG 295

Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
           LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 296 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 355

Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
           MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 356 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 415

Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
           GLVEEG SYFNSM+++YSITPQIEHYGCMVDLFGRAGLLDRAI+FVKRMPMEADAVIWAA
Sbjct: 416 GLVEEGTSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAA 475

Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
           LLGACRIYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTG 
Sbjct: 476 LLGACRIYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGC 535

Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
           KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVLKGLMKLLRSFGYEP IMELQQ S
Sbjct: 536 KKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYEPNIMELQQAS 593

BLAST of Lsi08G003910 vs. ExPASy TrEMBL
Match: A0A5D3BGP3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00310 PE=4 SV=1)

HSP 1 Score: 1030.0 bits (2662), Expect = 3.5e-297
Identity = 494/536 (92.16%), Postives = 514/536 (95.90%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           MA+ARHLFDHF DPKV LWNA FRGYFH  FYREV+FLF KMKSM VRPNCFTFPLVLKS
Sbjct: 56  MAHARHLFDHFVDPKVELWNAIFRGYFHKAFYREVVFLFGKMKSMGVRPNCFTFPLVLKS 115

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK GAF+EGEEIHCEVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERNIVAW
Sbjct: 116 CAKIGAFVEGEEIHCEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVGMLERNIVAW 175

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
           TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 176 TSMISGYILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTM 235

Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
           SWNTMLNGYANNGDVEACEQLFEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRMLIDG
Sbjct: 236 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDG 295

Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
           LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 296 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 355

Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
           MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 356 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 415

Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
           GLVEEG SYFNSM+++YSI PQIEHYGCMVDLFGRAGLLDRAI+FVKRMPMEADAVIWAA
Sbjct: 416 GLVEEGTSYFNSMVNEYSIKPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAA 475

Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
           LLGACRIYKN+DLAELALQKLI LEPKN ANYV+LSNIYGDLGRWKDVARLKIL+RDTGS
Sbjct: 476 LLGACRIYKNLDLAELALQKLILLEPKNTANYVLLSNIYGDLGRWKDVARLKILIRDTGS 535

Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQ 537
           KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVL GLMKLLRSFGYEP IMELQQ
Sbjct: 536 KKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLNGLMKLLRSFGYEPNIMELQQ 591

BLAST of Lsi08G003910 vs. ExPASy TrEMBL
Match: A0A6J1FDD3 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444727 PE=4 SV=1)

HSP 1 Score: 1027.7 bits (2656), Expect = 1.7e-296
Identity = 492/537 (91.62%), Postives = 510/537 (94.97%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           M YARHLFDHFPDPK+ALWNATFRGY  NEFYREVIFL  KMKSMDVRPNCFTFPLVLKS
Sbjct: 1   MDYARHLFDHFPDPKLALWNATFRGYVRNEFYREVIFLSGKMKSMDVRPNCFTFPLVLKS 60

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK  AF+EGE+IHCEVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERN+VAW
Sbjct: 61  CAKISAFVEGEQIHCEVIKGGFEGNQFVATTLIDVYSVGRAIGSAYKVFVGMLERNVVAW 120

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
           TSMISGYILCNDV  ARRLFDLAPERD+VLWNIMVSGYI IG+M AARKLFD MP RD M
Sbjct: 121 TSMISGYILCNDVVFARRLFDLAPERDVVLWNIMVSGYIEIGDMGAARKLFDAMPYRDVM 180

Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
           SWNTMLNGYANNGD+EACEQLFEEMP+RNVFSWNGLIG YAH G FFEVL CFKRMLIDG
Sbjct: 181 SWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGAYAHKGCFFEVLGCFKRMLIDG 240

Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
           LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 300

Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
           MEVFGSMD KD+ITWNSVICGLATHGCGADAL LFHQMKITG KPDGITFIGVLCSCTHL
Sbjct: 301 MEVFGSMDSKDVITWNSVICGLATHGCGADALNLFHQMKITGVKPDGITFIGVLCSCTHL 360

Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
           GLVEEGISYFNSM+HDYSI PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA
Sbjct: 361 GLVEEGISYFNSMVHDYSIVPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420

Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
           LLGACRI+KNIDL ELALQKLIQLEPKNPANYVMLSNIYGD+GRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIHKNIDLGELALQKLIQLEPKNPANYVMLSNIYGDVGRWKDVARLKILMRDTGS 480

Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQG 538
           KKLPGCSLIEVNDSVV+FYSLDERHS+S+EIYGVLKGLMKLLRSFGYEP IMEL QG
Sbjct: 481 KKLPGCSLIEVNDSVVEFYSLDERHSESEEIYGVLKGLMKLLRSFGYEPNIMELLQG 537

BLAST of Lsi08G003910 vs. NCBI nr
Match: XP_038886719.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 1067.4 bits (2759), Expect = 4.1e-308
Identity = 511/538 (94.98%), Postives = 525/538 (97.58%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLF KMKSMDVRPNCFTFPLVLKS
Sbjct: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFAKMKSMDVRPNCFTFPLVLKS 60

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK  AF+EGEEIHCEVIKGGFEGNQFVATTLIDVYSGGR IGSAYKVFV MLERNIVAW
Sbjct: 61  CAKIRAFVEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRVIGSAYKVFVGMLERNIVAW 120

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
           TSMISGYILCNDVALARRLFDLAPERD+VLWNIMVSGYI IG+MEAARKLFDTMP RDTM
Sbjct: 121 TSMISGYILCNDVALARRLFDLAPERDVVLWNIMVSGYIEIGDMEAARKLFDTMPYRDTM 180

Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
           SWNTML+GYANNGDVEACE+LFEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRML D 
Sbjct: 181 SWNTMLSGYANNGDVEACEKLFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLTDA 240

Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
           +VVPNDATLVTVLSACARLGALDLGKWVH+YAATIG+KGN+YVGNALIDMYSKCGVIENA
Sbjct: 241 VVVPNDATLVTVLSACARLGALDLGKWVHIYAATIGFKGNIYVGNALIDMYSKCGVIENA 300

Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
           MEVFGSMDLKDLITWNSVICGLAT+GCG DAL LFHQMKITGEKPDGITFIGVLCSCTHL
Sbjct: 301 MEVFGSMDLKDLITWNSVICGLATNGCGVDALNLFHQMKITGEKPDGITFIGVLCSCTHL 360

Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
           GLVEEGISYFNSM+HDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA
Sbjct: 361 GLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420

Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
           LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480

Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
           KK+PGCSLIEVNDSVV+FYSLDERHSQSKEIYGVLKGLMKLLRSFGYEP IMELQQGS
Sbjct: 481 KKMPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIMELQQGS 538

BLAST of Lsi08G003910 vs. NCBI nr
Match: XP_011656468.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sativus] >KGN45892.1 hypothetical protein Csa_005743 [Cucumis sativus])

HSP 1 Score: 1040.4 bits (2689), Expect = 5.3e-300
Identity = 499/538 (92.75%), Postives = 518/538 (96.28%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           MA+ARHLFDHFPDPKV LWNA  RGYFHN FYREV+FLF KMKSMDVRPNCFTFPLVLKS
Sbjct: 1   MAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKS 60

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK GAF+EGEEIHCEVIKGG EGNQFVATTLIDVYSGGRAIGSAYK+FV MLERNIVAW
Sbjct: 61  CAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAW 120

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
           TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 121 TSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTM 180

Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
           SWNTMLNGYANNGDVEACEQLFEEMP+RNVFSWNGLIGGYAHNG FFEVL CFKRMLIDG
Sbjct: 181 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 240

Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
           LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCG+IENA
Sbjct: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 300

Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
           MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 301 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 360

Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
           GLVEEG SYFNSM+++YSI PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA
Sbjct: 361 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420

Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
           LLGACRIYKNIDLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGS 480

Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
           KKLPGCSLIEVNDSVV+FYSLDERHSQSKEIYGVLKGLMKLLRSFGYEP +MEL QGS
Sbjct: 481 KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNMMELLQGS 538

BLAST of Lsi08G003910 vs. NCBI nr
Match: XP_016901901.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucumis melo] >KAA0061615.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1032.7 bits (2669), Expect = 1.1e-297
Identity = 495/538 (92.01%), Postives = 516/538 (95.91%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           MA+ARHLFDHF DPKV LWNA FRGYFH  FY+EV+FLF KMKSM VRPNCFTFPLVLKS
Sbjct: 56  MAHARHLFDHFLDPKVELWNAIFRGYFHKAFYKEVVFLFGKMKSMGVRPNCFTFPLVLKS 115

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK GAF+EGEEIH EVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERNIVAW
Sbjct: 116 CAKIGAFVEGEEIHSEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVVMLERNIVAW 175

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
           TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 176 TSMISGYILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTM 235

Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
           SWNTMLNGYANNGDVEACEQ+FEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRMLIDG
Sbjct: 236 SWNTMLNGYANNGDVEACEQMFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDG 295

Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
           LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 296 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 355

Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
           MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 356 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 415

Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
           GLVEEG SYFNSM+++YSITPQIEHYGCMVDLFGRAGLLDRAI+FVKRMPMEADAVIWAA
Sbjct: 416 GLVEEGTSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAA 475

Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
           LLGACRIYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTG 
Sbjct: 476 LLGACRIYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGC 535

Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQGS 539
           KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVLKGLMKLLRSFGYEP IMELQQ S
Sbjct: 536 KKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYEPNIMELQQAS 593

BLAST of Lsi08G003910 vs. NCBI nr
Match: XP_023549948.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1030.8 bits (2664), Expect = 4.2e-297
Identity = 493/537 (91.81%), Postives = 511/537 (95.16%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           M YARHLFDHFPDPK+ALWNATFRGY  NEFYREVIFL  KMKSMDVRPNCFTFPLVLKS
Sbjct: 1   MDYARHLFDHFPDPKLALWNATFRGYVRNEFYREVIFLSGKMKSMDVRPNCFTFPLVLKS 60

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK  AF+EGE+IHCEVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERN+VAW
Sbjct: 61  CAKISAFVEGEQIHCEVIKGGFEGNQFVATTLIDVYSVGRAIGSAYKVFVGMLERNVVAW 120

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
           TSMISGYILCNDV  ARRLFDLAPERD+VLWNIMVSGYI IG+M AARKLFD MP RD M
Sbjct: 121 TSMISGYILCNDVVFARRLFDLAPERDVVLWNIMVSGYIEIGDMAAARKLFDAMPYRDVM 180

Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
           SWNTMLNGYANNGD+EACEQLFEEMP+RNVFSWNGLIG YAH G FFEVL CFKRMLIDG
Sbjct: 181 SWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGAYAHKGCFFEVLGCFKRMLIDG 240

Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
           LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 300

Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
           MEVFGSMD KD+ITWNSVICGLATHGCGADAL LFHQMK+TGEKPDGITFIGVLCSCTHL
Sbjct: 301 MEVFGSMDSKDVITWNSVICGLATHGCGADALNLFHQMKMTGEKPDGITFIGVLCSCTHL 360

Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
           GLVEEGISYFNSM+HDYSI PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA
Sbjct: 361 GLVEEGISYFNSMVHDYSIVPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420

Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
           LLGACRI+KNIDL ELALQKLIQLEPKNPANYVMLSNIYGD+GRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIHKNIDLGELALQKLIQLEPKNPANYVMLSNIYGDVGRWKDVARLKILMRDTGS 480

Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQG 538
           KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVLKGLMKLLRSFGYEP IMEL QG
Sbjct: 481 KKLPGCSLIEVNDSVVEFYSLDERHSQSEEIYGVLKGLMKLLRSFGYEPNIMELLQG 537

BLAST of Lsi08G003910 vs. NCBI nr
Match: TYJ97821.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1030.0 bits (2662), Expect = 7.2e-297
Identity = 494/536 (92.16%), Postives = 514/536 (95.90%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           MA+ARHLFDHF DPKV LWNA FRGYFH  FYREV+FLF KMKSM VRPNCFTFPLVLKS
Sbjct: 56  MAHARHLFDHFVDPKVELWNAIFRGYFHKAFYREVVFLFGKMKSMGVRPNCFTFPLVLKS 115

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK GAF+EGEEIHCEVIKGGFEGNQFVATTLIDVYS GRAIGSAYKVFV MLERNIVAW
Sbjct: 116 CAKIGAFVEGEEIHCEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVGMLERNIVAW 175

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTM 180
           TSMISGYILCN VALARRLFDLAPERD+VLWNIMVSGYI IG+M+AARKLFDTMP RDTM
Sbjct: 176 TSMISGYILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTM 235

Query: 181 SWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDG 240
           SWNTMLNGYANNGDVEACEQLFEEMP+RNVFSWNGLIGGYAHNGRFFEVL CFKRMLIDG
Sbjct: 236 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDG 295

Query: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENA 300
           LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIG+KG++YVGNALIDMYSKCGVIENA
Sbjct: 296 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENA 355

Query: 301 MEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 360
           MEVF SMDLKDLITWNS+ICGLATHGCGADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 356 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 415

Query: 361 GLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
           GLVEEG SYFNSM+++YSI PQIEHYGCMVDLFGRAGLLDRAI+FVKRMPMEADAVIWAA
Sbjct: 416 GLVEEGTSYFNSMVNEYSIKPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAA 475

Query: 421 LLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 480
           LLGACRIYKN+DLAELALQKLI LEPKN ANYV+LSNIYGDLGRWKDVARLKIL+RDTGS
Sbjct: 476 LLGACRIYKNLDLAELALQKLILLEPKNTANYVLLSNIYGDLGRWKDVARLKILIRDTGS 535

Query: 481 KKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPIIMELQQ 537
           KKLPGCSLIEVNDSVV+FYSLDERHSQS+EIYGVL GLMKLLRSFGYEP IMELQQ
Sbjct: 536 KKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLNGLMKLLRSFGYEPNIMELQQ 591

BLAST of Lsi08G003910 vs. TAIR 10
Match: AT1G13410.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 575.1 bits (1481), Expect = 5.9e-164
Identity = 266/418 (63.64%), Postives = 334/418 (79.90%), Query Frame = 0

Query: 102 IGSAYKVFVEMLERNIVAWTSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGI 161
           I SA KVF EM+E+N+V WTSMI+GY+L  D+  ARR FDL+PERDIVLWN M+SGYI +
Sbjct: 44  IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEM 103

Query: 162 GNMEAARKLFDTMPCRDTMSWNTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYA 221
           GNM  AR LFD MPCRD MSWNT+L GYAN GD+EACE++F++MP+RNVFSWNGLI GYA
Sbjct: 104 GNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYA 163

Query: 222 HNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGY-KGN 281
            NGR  EVL  FKRM+ +G VVPNDAT+  VLSACA+LGA D GKWVH Y  T+GY K +
Sbjct: 164 QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD 223

Query: 282 VYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKI 341
           V V NALIDMY KCG IE AMEVF  +  +DLI+WN++I GLA HG G +AL LFH+MK 
Sbjct: 224 VNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKN 283

Query: 342 TGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLD 401
           +G  PD +TF+GVLC+C H+GLVE+G++YFNSM  D+SI P+IEH GC+VDL  RAG L 
Sbjct: 284 SGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLT 343

Query: 402 RAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYG 461
           +A+EF+ +MP++ADAVIWA LLGA ++YK +D+ E+AL++LI+LEP+NPAN+VMLSNIYG
Sbjct: 344 QAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYG 403

Query: 462 DLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGL 519
           D GR+ D ARLK+ MRDTG KK  G S IE +D +V+FYS  E+H +++E+  +L+ L
Sbjct: 404 DAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461

BLAST of Lsi08G003910 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 443.4 bits (1139), Expect = 2.7e-124
Identity = 228/577 (39.51%), Postives = 340/577 (58.93%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKS 60
           + YA  +F    +P + +WN  FRG+  +      + L+  M S+ + PN +TFP VLKS
Sbjct: 84  LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143

Query: 61  CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVAW 120
           CAK+ AF EG++IH  V+K G + + +V T+LI +Y     +  A+KVF +   R++V++
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203

Query: 121 TSMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTM------ 180
           T++I GY     +  A++LFD  P +D+V WN M+SGY   GN + A +LF  M      
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263

Query: 181 PCRDTM--------------------SW-------------NTMLNGYANNGDVEACEQL 240
           P   TM                     W             N +++ Y+  G++E    L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323

Query: 241 FEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLGA 300
           FE +P ++V SWN LIGGY H   + E L  F+ ML  G   PND T++++L ACA LGA
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHLGA 383

Query: 301 LDLGKWVHVY--AATIGYKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVI 360
           +D+G+W+HVY      G      +  +LIDMY+KCG IE A +VF S+  K L +WN++I
Sbjct: 384 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 443

Query: 361 CGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSI 420
            G A HG    +  LF +M+  G +PD ITF+G+L +C+H G+++ G   F +M  DY +
Sbjct: 444 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 503

Query: 421 TPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQ 480
           TP++EHYGCM+DL G +GL   A E +  M ME D VIW +LL AC+++ N++L E   +
Sbjct: 504 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 563

Query: 481 KLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFY 537
            LI++EP+NP +YV+LSNIY   GRW +VA+ + L+ D G KK+PGCS IE++  V +F 
Sbjct: 564 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 623

BLAST of Lsi08G003910 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 439.9 bits (1130), Expect = 3.0e-123
Identity = 218/576 (37.85%), Postives = 334/576 (57.99%), Query Frame = 0

Query: 1   MAYARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKS-MDVRPNCFTFPLVLK 60
           + YAR +FD  P P    WN   R Y         I+ F  M S     PN +TFP ++K
Sbjct: 80  LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139

Query: 61  SCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGGRAIGSAYKVFVEMLERNIVA 120
           + A+  +   G+ +H   +K     + FVA +LI  Y     + SA KVF  + E+++V+
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199

Query: 121 WTSMISGYILCNDVALARRLFDLAPERDI------------------------------- 180
           W SMI+G++       A  LF      D+                               
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259

Query: 181 --------VLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMSWNTMLNGYANNGDVEACEQ 240
                    L N M+  Y   G++E A++LFD M  +D ++W TML+GYA + D EA  +
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319

Query: 241 LFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLVVPNDATLVTVLSACARLG 300
           +   MP +++ +WN LI  Y  NG+  E L  F  + +   +  N  TLV+ LSACA++G
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379

Query: 301 ALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVIC 360
           AL+LG+W+H Y    G + N +V +ALI MYSKCG +E + EVF S++ +D+  W+++I 
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439

Query: 361 GLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMIHDYSIT 420
           GLA HGCG +A+ +F++M+    KP+G+TF  V C+C+H GLV+E  S F+ M  +Y I 
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499

Query: 421 PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQK 480
           P+ +HY C+VD+ GR+G L++A++F++ MP+     +W ALLGAC+I+ N++LAE+A  +
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTR 559

Query: 481 LIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVQFYS 537
           L++LEP+N   +V+LSNIY  LG+W++V+ L+  MR TG KK PGCS IE++  + +F S
Sbjct: 560 LLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 619

BLAST of Lsi08G003910 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 425.2 bits (1092), Expect = 7.6e-119
Identity = 208/521 (39.92%), Postives = 314/521 (60.27%), Query Frame = 0

Query: 4   ARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKSCAK 63
           A  +F+   +P V L N+  R +  N    +  F+F +M+   +  + FT+P +LK+C+ 
Sbjct: 70  AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129

Query: 64  NGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYS--GGRAIGSAYKVFVEMLERNIVAWT 123
                  + +H  + K G   + +V   LID YS  GG  +  A K+F +M ER+ V+W 
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189

Query: 124 SMISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMS 183
           SM+ G +   ++  ARRLFD  P+RD++ WN M+ GY     M  A +LF+ MP R+T+S
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249

Query: 184 WNTMLNGYANNGDVEACEQLFEEM--PDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLID 243
           W+TM+ GY+  GD+E    +F++M  P +NV +W  +I GYA  G   E      +M+  
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309

Query: 244 GLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIEN 303
           GL   + A ++++L+AC   G L LG  +H          N YV NAL+DMY+KCG ++ 
Sbjct: 310 GLKF-DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 369

Query: 304 AMEVFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTH 363
           A +VF  +  KDL++WN+++ GL  HG G +A+ LF +M+  G +PD +TFI VLCSC H
Sbjct: 370 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 429

Query: 364 LGLVEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWA 423
            GL++EGI YF SM   Y + PQ+EHYGC+VDL GR G L  AI+ V+ MPME + VIW 
Sbjct: 430 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 489

Query: 424 ALLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTG 483
           ALLGACR++  +D+A+  L  L++L+P +P NY +LSNIY     W+ VA ++  M+  G
Sbjct: 490 ALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 549

Query: 484 SKKLPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMK 521
            +K  G S +E+ D + +F   D+ H +S +IY +L  L++
Sbjct: 550 VEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589

BLAST of Lsi08G003910 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 411.4 bits (1056), Expect = 1.1e-114
Identity = 214/525 (40.76%), Postives = 298/525 (56.76%), Query Frame = 0

Query: 4   ARHLFDHFPDPKVALWNATFRGYFHNEFYREVIFLFWKMKSMDVRPNCFTFPLVLKSCAK 63
           AR +FD  P+     WNA    Y  N    E   LF   KS +       + LV  +C  
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF---KSRE------NWALVSWNCLL 235

Query: 64  NGAFLEGEEIHCEVIKGGFEGNQFVA-TTLIDVYSGGRAIGSAYKVFVEMLERNIVAWTS 123
            G   + + +              V+  T+I  Y+    I  A ++F E   +++  WT+
Sbjct: 236 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 295

Query: 124 MISGYILCNDVALARRLFDLAPERDIVLWNIMVSGYIGIGNMEAARKLFDTMPCRDTMSW 183
           M+SGYI    V  AR LFD  PER+ V WN M++GY+    ME A++LFD MPCR+  +W
Sbjct: 296 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 355

Query: 184 NTMLNGYANNGDVEACEQLFEEMPDRNVFSWNGLIGGYAHNGRFFEVLSCFKRMLIDGLV 243
           NTM+ GYA  G +   + LF++MP R+  SW  +I GY+ +G  FE L  F +M  +G  
Sbjct: 356 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 415

Query: 244 VPNDATLVTVLSACARLGALDLGKWVHVYAATIGYKGNVYVGNALIDMYSKCGVIENAME 303
           + N ++  + LS CA + AL+LGK +H      GY+   +VGNAL+ MY KCG IE A +
Sbjct: 416 L-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 475

Query: 304 VFGSMDLKDLITWNSVICGLATHGCGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGL 363
           +F  M  KD+++WN++I G + HG G  AL  F  MK  G KPD  T + VL +C+H GL
Sbjct: 476 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 535

Query: 364 VEEGISYFNSMIHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 423
           V++G  YF +M  DY + P  +HY CMVDL GRAGLL+ A   +K MP E DA IW  LL
Sbjct: 536 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 595

Query: 424 GACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKK 483
           GA R++ N +LAE A  K+  +EP+N   YV+LSN+Y   GRW DV +L++ MRD G KK
Sbjct: 596 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 655

Query: 484 LPGCSLIEVNDSVVQFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 528
           +PG S IE+ +    F   DE H +  EI+  L+ L   ++  GY
Sbjct: 656 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGY 690

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LN013.8e-12339.51Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823804.2e-12237.85Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9LS721.1e-11739.92Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... [more]
Q9SY021.6e-11340.76Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
Q1PEU47.4e-11140.04Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0KBY42.6e-30092.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017080 PE=4 SV=1[more]
A0A5A7V6Y95.4e-29892.01Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4E0Z45.4e-29892.01pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... [more]
A0A5D3BGP33.5e-29792.16Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1FDD31.7e-29691.62pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... [more]
Match NameE-valueIdentityDescription
XP_038886719.14.1e-30894.98pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Benin... [more]
XP_011656468.15.3e-30092.75pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sa... [more]
XP_016901901.11.1e-29792.01PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... [more]
XP_023549948.14.2e-29791.81pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... [more]
TYJ97821.17.2e-29792.16pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT1G13410.15.9e-16463.64Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.12.7e-12439.51Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.13.0e-12337.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G29230.17.6e-11939.92Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G02750.11.1e-11440.76Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..99
e-value: 4.0E-14
score: 54.3
coord: 100..177
e-value: 1.1E-15
score: 59.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 284..510
e-value: 1.9E-36
score: 128.0
coord: 178..274
e-value: 1.1E-21
score: 79.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 193..466
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 313..346
e-value: 1.6E-6
score: 25.9
coord: 211..245
e-value: 2.5E-6
score: 25.3
coord: 149..177
e-value: 3.5E-4
score: 18.5
coord: 181..210
e-value: 3.8E-8
score: 31.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 285..308
e-value: 0.004
score: 17.3
coord: 19..46
e-value: 0.17
score: 12.2
coord: 90..117
e-value: 0.57
score: 10.6
coord: 118..145
e-value: 0.026
score: 14.7
coord: 385..410
e-value: 0.01
score: 16.0
coord: 181..210
e-value: 1.8E-8
score: 34.1
coord: 211..240
e-value: 1.6E-6
score: 27.9
coord: 149..176
e-value: 6.8E-4
score: 19.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 310..357
e-value: 1.3E-7
score: 31.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 311..345
score: 10.468099
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 178..212
score: 11.958836
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 147..177
score: 9.13082
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 12..160
coord: 162..206
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 207..528
NoneNo IPR availablePANTHERPTHR47926:SF81TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEINcoord: 12..160
coord: 162..206
NoneNo IPR availablePANTHERPTHR47926:SF81TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEINcoord: 207..528

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G003910.1Lsi08G003910.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding