Lsi07G012030 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGGTTAGTACTAAATGGTTTTCATTTTTATGTGTGGTAAAGACCAAACCCTTTACATTTCCAAAAAGTGCAAGAAAGGAGAGTTCATCAAAATCAAAGCCTTCCATAAATCTTGAGCACAAATACTTGAAACATTGTCCAAGTGGATCAGTTCCTATTAGAAGAACTCAAAAGGAGGATTTTATGAGAATTAAGTCTCTTTCAAATTCATCAACACATGTTGGCCTTAATGGAGTCAACTTTCCATCCAATCAATTGGTAAGAAAAAAGTCTACTCTGAAAATTTTCACCGATAGAAAAAATATAAAACTATTTATAAAAAATAGCAAAAACAAATACTGATAGACATTGATAGACTTCTATCAGTATCTATTAGTGATAGATTTCTATCACTTCTATCACTGATAGATCCTGATAGACTTTTATCAGCGTCTATTACAACTATCTAAAAATTTTGCTATTTTGTGTAAATAATTTCTCTTATTTTTCTATTTTTAAAAATTCTCCCTACTTTAAATCTAGTTTTATTAATAAAAAAAAAGGGGAGAGTTTAAATAATTAGGTGTGATAATATTGTTGATAATTCAGGTGGTGTCTCTTTCAATGAACGAAAATCAGCCATACTATGGAGTGACTGGAACAATGTCTGCTTACAATTTAAGTGTTGCTCAAGACCAAGCTTCATCTACAAACTTATGGGTTATTGGTGGCCCTCCACAACAGCTTAGTGTCATTCTTGCTGGATGGCAGGTTACACAAACATTTTTTTTTTTTTAATTTTAGGTTAAACATGGTCATTTGATAAGGTTTTTGTTTTATGTTTCGCGTTTTAACCAATCATAAAGTTTTTCTGAGTGTTCTTGTTAATCCTATCATTCAAAAACGAAAAAATTAAAAATGTTTCCAAAATTATTTTGTACAAATTTTGAAAACAAAAAAAAATAAAAATGAAGTTTTTCTTTTTCTTTTACTACAACAATTTTGGGCTTAGATGACAGTTGACGTTTTCTAAACGCTGACGGATTGACTCTATAATGTCGGTTATTTTGAAAAAAGCGCCTATTTTCATAGAAATTTTTGGTTATAAACGAAATTTTTATAAAAGATGGCAGACAAACCCAATCATCGTACGCACTGTTACGATGGCGGTTCAACACCGCCATCTAAACCTAGAAAAAATATGGGAATATGTGCACGCGCTTTATTTTATTTTAGATGGCAGTTCACAACTGACATGTAAAGTCAAAATTATTGTAGTGTTTGTTTCTATTTTTTCCCAAAACATAAATAAAAGTGTTATTGTTATCATTTTTGACTTATAATATACATAACTAAATATTGAAAATATGAAATATAACAACTAAAAATTTAAGAAAAATATTTAAGTGTCTGTTTGGCTGCACCTATTTATTGCCGCCCATCCGTTGCCCAATTAAAATTTCCCATGTGGTAAGCAATTTTTGTTTTATTTTAAAAAAATTAAATTGTTATTTCTGGTTGTGTAATAAATATGGGCAACATGAGATAGGAGATTATACATAATCATTTCCCATAATTGAATATTCACTATGTTTTAATATTATTTATAACCTTTTGAAAGTTAATCCTATTTGGTAATTGTTTCATTTTTAGTTTTTTATTTTTAAAAATTAAGTCTATTTTCTCACATTTTTTTACAATAGTTTGCATTTTTTTTAGTACAAAGAGTTGAATTTTTAGCCAAATTCCAAAAACAAAAACAAGTTTTTGAAAACTACTTTTTTTAGTTTTCAAAATTTGGCTTGATTTTTGAAAATATGGGTAAAAAGTAAACAAAAAAGCAAGACATTTCAGAGTAAAATAAATTTTTGTAGGCTTAATTTTTTAAAAACTAAAAACTAAAAATAAAAAATCAAATAGTTATCAAACGAAGACTAAATGACTAGAGTTGCGGTTTCTAATTTTAAAAAGTGTCTAACATAATTTAGGAATTTATGTCACACATACATTAAAAAGCTTAGGGATTAACCTTATTATTTAGCCTATAGTTATAATTTTATGTTTTGAGGATATAATGTTGTTTTGTTCTTTTTAAAATTCAATTCTGACTTACTATATATATATATTAAATTGTAAAGGTAAATCCAGCTGTAAATGGTGGTGACGACACAAGAATGTATATTTATTGGACGGTGAGTAAGTTTGAAATGTTATATGATTCAATATTTTCCTAATTTTAATAAACAATTTAGTTTCTAAATTTTTATTAGCAACGATCTCGTTTATATATATTAAATTTATAATAATTTAGTTATTAAATTTTAATGAGTAATAATTTATTCTATATATTTTACAATTTATAACGAATTAAAAAAAATATTCTTCAGATTTAATGAAATTTCTTACACATGTAGATCGTTAAACTAATAGAATTTTTTTTTCCATAAATTATAAGGATTAAGTCATTCCACAATAAAAGTTAACACTCAATTTTAAAAAGTTTTTTTTTTTTTAATAATAAGTAACATTTAGGGACCAAATTGTTACTTTAATAAAATTTTAAAGACCAAATAATAATTTTTAACCTTGTTTAAATTCAATCTACTAAAAAATATTGGTTTTGAGTTAATTTAGGGTGACGGGTCTCAAAGAACAGGGTGTTACAATATGCTTTGCCGAGGCTTTGTCCAAACAGATCGAACATATTATGTAGGTTTCCCTTTGAGACCAACTTCTTTTGTTGGGGGAGATCAATATGAGATTAAATTATATGTCTATCAGGTATTATTTCTAATCCAACCCTACAATATTAAAGGTTTGTTTGGATTAACTTTTTAAATTTTTAAACAATTGTTTATAAGTGTGAAAAAAGTGTTTATAGATACTTAGAAAATCAATTCAAATGGACCCTAATACTATATCAATTCTTGTAACTTTTACTTTAGTTCATTTTAGTCTTTATGTTTTTAAAATATTTTTTTCGGTTTCTATACTTTTAATTTTAGTTCAATTTTGGTTCCTATACTTTCAAAATGTTTATTTTGATCATTGTTCTTTTAACTTTAGTTGATTTTAGTTCTTGAAGTTTGTTTTCGTCGGGAAATCCTTTCCCGATACATTTTGAGACTTTTTCCGACATTTTTAGTGTCGGAAGAAGTCTAATTTTTTGTAGTGCATTTTGGTCTGTTAAAAAGTATAAGGATGTCAAAATAACAATTTTAAAGTAAGGATTAAGATGTCTATTTTAAAAGTACAATGACTAAAATAAATTAAAAGTTAAAAATAGAGGGACCAAATTTTTTTTTTAAATCTTAATATATTTCAGATTTTAAATTGGGTAGGGAGAAGAAGACGACCATTTGGTTGATTGTTTAAGTTAGAGGTAAAAATAAATCATTCAATTTTCTTAGTTTTGAAGTGTCAACCAAGAATTAAACCAAATTGATTGATGTTATAAAGAAGTGAATCAAACTGATGTTGAATAAAGAACAAAACTAAATAGAATGTTTATTATGCGTTTCGGTTTACTGTCGGTTTGGTTCTCGATTTTTGCCATTTTTGCCATTTTTTCTTTTAACTTTTCATTTTCATTTTTTTTTAAAATTTTTTTCAATTGGGTCTTTTTGCCTTTTTTTTCAAATTAAAATTGGACATTTTCTTTTTTATAGATTGCAATTGGACATTTTTATTATTTTCCTTGACCTTTCTCTAATGAACAAATATACATGCACATCATCTCAGTTCGGTTCGATTTTAGTTGGGGTTTTGAATTAGAAACCAATCTGAACCAATAATCTTTGTCTCCAAATTCAAACTAAATGTCCAATTTTATACTAAAAAACCAAACCAAACCAGTAGGTTGACTTGGTTGGATGTTTCAAATTTTTTGTCACAACTCCTAATTTTGGTGGTCAATGATTCATATGATATATTCATACATATTTTTTGACAATATATTATGTGGAGTCGGAAGTCAAATCTTTGATCTTGAGATTGATAGTAAAAGTTATATGACAATGTAGGACCGAAAGTCAGGAAATTGGTGGGTTTCAATTTATGAAGATGGGAAAGCGATCGGATATTTTCCAAAAGAGTTGTTTCCAAATCTAAGCAATGGGGCAAAACAAGTAGCTTGGGGAGGCATTGCAAAGAAAGGGAAGAATGGAATGAGCCCTCCATTAGGGAGTGGCAATTTACCTAATGGAAACTTTAGGGTTGCATGTTACATTAGAGGAATTAGATATGTGAATGATCAAAACTTGGGAATACCTCCAAAGCAAACTGAACTTCAACAATATATTGGGGACTCTAAATGTTATGGTTTGCAAGATGATAGAACTTGTGGGGGTTTTGATCAAATGTATTATTGCTTCACATATGGTGGACCAGGTGGGAAATGTGGGGCTGCTGTTAAAACTTAA ATGAAAAGTGCAAGAAAGGAGAGTTCATCAAAATCAAAGCCTTCCATAAATCTTGAGCACAAATACTTGAAACATTGTCCAAGTGGATCAGTTCCTATTAGAAGAACTCAAAAGGAGGATTTTATGAGAATTAAGTCTCTTTCAAATTCATCAACACATGTGGTGTCTCTTTCAATGAACGAAAATCAGCCATACTATGGAGTGACTGGAACAATGTCTGCTTACAATTTAAGTGTTGCTCAAGACCAAGCTTCATCTACAAACTTATGGGTTATTGGTGGCCCTCCACAACAGCTTAGTGTCATTCTTGCTGGATGGCAGGTTAAACATGGTCATTTGATAAGGTTTTTGTTTTATGTAAATCCAGCTGTAAATGGTGGTGACGACACAAGAATCAATGGGGCAAAACAAGTAGCTTGGGGAGGCATTGCAAAGAAAGGGAAGAATGGAATGAGCCCTCCATTAGGGAGTGGCAATTTACCTAATGGAAACTTTAGGGTTGCATGTTACATTAGAGGAATTAGATATGTGAATGATCAAAACTTGGGAATACCTCCAAAGCAAACTGAACTTCAACAATATATTGGGGACTCTAAATGTTATGGTTTGCAAGATGATAGAACTTGTGGGGGTTTTGATCAAATGTATTATTGCTTCACATATGGTGGACCAGGTGGGAAATGTGGGGCTGCTGTTAAAACTTAA ATGAAAAGTGCAAGAAAGGAGAGTTCATCAAAATCAAAGCCTTCCATAAATCTTGAGCACAAATACTTGAAACATTGTCCAAGTGGATCAGTTCCTATTAGAAGAACTCAAAAGGAGGATTTTATGAGAATTAAGTCTCTTTCAAATTCATCAACACATGTGGTGTCTCTTTCAATGAACGAAAATCAGCCATACTATGGAGTGACTGGAACAATGTCTGCTTACAATTTAAGTGTTGCTCAAGACCAAGCTTCATCTACAAACTTATGGGTTATTGGTGGCCCTCCACAACAGCTTAGTGTCATTCTTGCTGGATGGCAGGTTAAACATGGTCATTTGATAAGGTTTTTGTTTTATGTAAATCCAGCTGTAAATGGTGGTGACGACACAAGAATCAATGGGGCAAAACAAGTAGCTTGGGGAGGCATTGCAAAGAAAGGGAAGAATGGAATGAGCCCTCCATTAGGGAGTGGCAATTTACCTAATGGAAACTTTAGGGTTGCATGTTACATTAGAGGAATTAGATATGTGAATGATCAAAACTTGGGAATACCTCCAAAGCAAACTGAACTTCAACAATATATTGGGGACTCTAAATGTTATGGTTTGCAAGATGATAGAACTTGTGGGGGTTTTGATCAAATGTATTATTGCTTCACATATGGTGGACCAGGTGGGAAATGTGGGGCTGCTGTTAAAACTTAA MKSARKESSSKSKPSINLEHKYLKHCPSGSVPIRRTQKEDFMRIKSLSNSSTHVVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILAGWQVKHGHLIRFLFYVNPAVNGGDDTRINGAKQVAWGGIAKKGKNGMSPPLGSGNLPNGNFRVACYIRGIRYVNDQNLGIPPKQTELQQYIGDSKCYGLQDDRTCGGFDQMYYCFTYGGPGGKCGAAVKT Homology
BLAST of Lsi07G012030 vs. ExPASy TrEMBL
Match: A0A6J1CVJ6 (uncharacterized protein LOC111014777 OS=Momordica charantia OX=3673 GN=LOC111014777 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 4.6e-44 Identity = 111/276 (40.22%), Postives = 149/276 (53.99%), Query Frame = 0
BLAST of Lsi07G012030 vs. ExPASy TrEMBL
Match: A0A6J1CVW9 (uncharacterized protein LOC111014774 OS=Momordica charantia OX=3673 GN=LOC111014774 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 3.0e-35 Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = 0
BLAST of Lsi07G012030 vs. ExPASy TrEMBL
Match: W9RN49 (Neprosin domain-containing protein OS=Morus notabilis OX=981085 GN=L484_023259 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 6.2e-33 Identity = 90/225 (40.00%), Postives = 126/225 (56.00%), Query Frame = 0
BLAST of Lsi07G012030 vs. ExPASy TrEMBL
Match: A0A1R3KA80 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10038 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 3.8e-30 Identity = 83/215 (38.60%), Postives = 106/215 (49.30%), Query Frame = 0
BLAST of Lsi07G012030 vs. ExPASy TrEMBL
Match: V4SWW2 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012304mg PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.5e-29 Identity = 90/266 (33.83%), Postives = 119/266 (44.74%), Query Frame = 0
BLAST of Lsi07G012030 vs. NCBI nr
Match: XP_022145288.1 (uncharacterized protein LOC111014777 [Momordica charantia]) HSP 1 Score: 188.0 bits (476), Expect = 9.5e-44 Identity = 111/276 (40.22%), Postives = 149/276 (53.99%), Query Frame = 0
BLAST of Lsi07G012030 vs. NCBI nr
Match: XP_024038072.1 (uncharacterized protein LOC18039972 [Citrus clementina] >XP_024948531.1 uncharacterized protein LOC112495883 [Citrus sinensis]) HSP 1 Score: 161.0 bits (406), Expect = 1.2e-35 Identity = 111/329 (33.74%), Postives = 148/329 (44.98%), Query Frame = 0
BLAST of Lsi07G012030 vs. NCBI nr
Match: XP_022145286.1 (uncharacterized protein LOC111014774 [Momordica charantia]) HSP 1 Score: 158.7 bits (400), Expect = 6.2e-35 Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = 0
BLAST of Lsi07G012030 vs. NCBI nr
Match: EXB99729.1 (hypothetical protein L484_023259 [Morus notabilis]) HSP 1 Score: 151.0 bits (380), Expect = 1.3e-32 Identity = 90/225 (40.00%), Postives = 126/225 (56.00%), Query Frame = 0
BLAST of Lsi07G012030 vs. NCBI nr
Match: OMP03992.1 (hypothetical protein COLO4_10038 [Corchorus olitorius]) HSP 1 Score: 141.7 bits (356), Expect = 7.8e-30 Identity = 83/215 (38.60%), Postives = 106/215 (49.30%), Query Frame = 0
BLAST of Lsi07G012030 vs. TAIR 10
Match: AT5G11660.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 83.2 bits (204), Expect = 3.1e-16 Identity = 75/311 (24.12%), Postives = 127/311 (40.84%), Query Frame = 0
BLAST of Lsi07G012030 vs. TAIR 10
Match: AT5G05030.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 56.2 bits (134), Expect = 4.0e-08 Identity = 30/111 (27.03%), Postives = 57/111 (51.35%), Query Frame = 0
BLAST of Lsi07G012030 vs. TAIR 10
Match: AT4G23390.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 52.8 bits (125), Expect = 4.4e-07 Identity = 29/95 (30.53%), Postives = 43/95 (45.26%), Query Frame = 0
BLAST of Lsi07G012030 vs. TAIR 10
Match: AT1G10750.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 52.4 bits (124), Expect = 5.8e-07 Identity = 32/98 (32.65%), Postives = 51/98 (52.04%), Query Frame = 0
BLAST of Lsi07G012030 vs. TAIR 10
Match: AT5G56530.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 52.0 bits (123), Expect = 7.6e-07 Identity = 44/151 (29.14%), Postives = 70/151 (46.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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