Lsi07G012030 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi07G012030
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of Unknown Function (DUF239)
Locationchr07: 17519146 .. 17523550 (+)
RNA-Seq ExpressionLsi07G012030
SyntenyLsi07G012030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGGTTAGTACTAAATGGTTTTCATTTTTATGTGTGGTAAAGACCAAACCCTTTACATTTCCAAAAAGTGCAAGAAAGGAGAGTTCATCAAAATCAAAGCCTTCCATAAATCTTGAGCACAAATACTTGAAACATTGTCCAAGTGGATCAGTTCCTATTAGAAGAACTCAAAAGGAGGATTTTATGAGAATTAAGTCTCTTTCAAATTCATCAACACATGTTGGCCTTAATGGAGTCAACTTTCCATCCAATCAATTGGTAAGAAAAAAGTCTACTCTGAAAATTTTCACCGATAGAAAAAATATAAAACTATTTATAAAAAATAGCAAAAACAAATACTGATAGACATTGATAGACTTCTATCAGTATCTATTAGTGATAGATTTCTATCACTTCTATCACTGATAGATCCTGATAGACTTTTATCAGCGTCTATTACAACTATCTAAAAATTTTGCTATTTTGTGTAAATAATTTCTCTTATTTTTCTATTTTTAAAAATTCTCCCTACTTTAAATCTAGTTTTATTAATAAAAAAAAAGGGGAGAGTTTAAATAATTAGGTGTGATAATATTGTTGATAATTCAGGTGGTGTCTCTTTCAATGAACGAAAATCAGCCATACTATGGAGTGACTGGAACAATGTCTGCTTACAATTTAAGTGTTGCTCAAGACCAAGCTTCATCTACAAACTTATGGGTTATTGGTGGCCCTCCACAACAGCTTAGTGTCATTCTTGCTGGATGGCAGGTTACACAAACATTTTTTTTTTTTTAATTTTAGGTTAAACATGGTCATTTGATAAGGTTTTTGTTTTATGTTTCGCGTTTTAACCAATCATAAAGTTTTTCTGAGTGTTCTTGTTAATCCTATCATTCAAAAACGAAAAAATTAAAAATGTTTCCAAAATTATTTTGTACAAATTTTGAAAACAAAAAAAAATAAAAATGAAGTTTTTCTTTTTCTTTTACTACAACAATTTTGGGCTTAGATGACAGTTGACGTTTTCTAAACGCTGACGGATTGACTCTATAATGTCGGTTATTTTGAAAAAAGCGCCTATTTTCATAGAAATTTTTGGTTATAAACGAAATTTTTATAAAAGATGGCAGACAAACCCAATCATCGTACGCACTGTTACGATGGCGGTTCAACACCGCCATCTAAACCTAGAAAAAATATGGGAATATGTGCACGCGCTTTATTTTATTTTAGATGGCAGTTCACAACTGACATGTAAAGTCAAAATTATTGTAGTGTTTGTTTCTATTTTTTCCCAAAACATAAATAAAAGTGTTATTGTTATCATTTTTGACTTATAATATACATAACTAAATATTGAAAATATGAAATATAACAACTAAAAATTTAAGAAAAATATTTAAGTGTCTGTTTGGCTGCACCTATTTATTGCCGCCCATCCGTTGCCCAATTAAAATTTCCCATGTGGTAAGCAATTTTTGTTTTATTTTAAAAAAATTAAATTGTTATTTCTGGTTGTGTAATAAATATGGGCAACATGAGATAGGAGATTATACATAATCATTTCCCATAATTGAATATTCACTATGTTTTAATATTATTTATAACCTTTTGAAAGTTAATCCTATTTGGTAATTGTTTCATTTTTAGTTTTTTATTTTTAAAAATTAAGTCTATTTTCTCACATTTTTTTACAATAGTTTGCATTTTTTTTAGTACAAAGAGTTGAATTTTTAGCCAAATTCCAAAAACAAAAACAAGTTTTTGAAAACTACTTTTTTTAGTTTTCAAAATTTGGCTTGATTTTTGAAAATATGGGTAAAAAGTAAACAAAAAAGCAAGACATTTCAGAGTAAAATAAATTTTTGTAGGCTTAATTTTTTAAAAACTAAAAACTAAAAATAAAAAATCAAATAGTTATCAAACGAAGACTAAATGACTAGAGTTGCGGTTTCTAATTTTAAAAAGTGTCTAACATAATTTAGGAATTTATGTCACACATACATTAAAAAGCTTAGGGATTAACCTTATTATTTAGCCTATAGTTATAATTTTATGTTTTGAGGATATAATGTTGTTTTGTTCTTTTTAAAATTCAATTCTGACTTACTATATATATATATTAAATTGTAAAGGTAAATCCAGCTGTAAATGGTGGTGACGACACAAGAATGTATATTTATTGGACGGTGAGTAAGTTTGAAATGTTATATGATTCAATATTTTCCTAATTTTAATAAACAATTTAGTTTCTAAATTTTTATTAGCAACGATCTCGTTTATATATATTAAATTTATAATAATTTAGTTATTAAATTTTAATGAGTAATAATTTATTCTATATATTTTACAATTTATAACGAATTAAAAAAAATATTCTTCAGATTTAATGAAATTTCTTACACATGTAGATCGTTAAACTAATAGAATTTTTTTTTCCATAAATTATAAGGATTAAGTCATTCCACAATAAAAGTTAACACTCAATTTTAAAAAGTTTTTTTTTTTTTAATAATAAGTAACATTTAGGGACCAAATTGTTACTTTAATAAAATTTTAAAGACCAAATAATAATTTTTAACCTTGTTTAAATTCAATCTACTAAAAAATATTGGTTTTGAGTTAATTTAGGGTGACGGGTCTCAAAGAACAGGGTGTTACAATATGCTTTGCCGAGGCTTTGTCCAAACAGATCGAACATATTATGTAGGTTTCCCTTTGAGACCAACTTCTTTTGTTGGGGGAGATCAATATGAGATTAAATTATATGTCTATCAGGTATTATTTCTAATCCAACCCTACAATATTAAAGGTTTGTTTGGATTAACTTTTTAAATTTTTAAACAATTGTTTATAAGTGTGAAAAAAGTGTTTATAGATACTTAGAAAATCAATTCAAATGGACCCTAATACTATATCAATTCTTGTAACTTTTACTTTAGTTCATTTTAGTCTTTATGTTTTTAAAATATTTTTTTCGGTTTCTATACTTTTAATTTTAGTTCAATTTTGGTTCCTATACTTTCAAAATGTTTATTTTGATCATTGTTCTTTTAACTTTAGTTGATTTTAGTTCTTGAAGTTTGTTTTCGTCGGGAAATCCTTTCCCGATACATTTTGAGACTTTTTCCGACATTTTTAGTGTCGGAAGAAGTCTAATTTTTTGTAGTGCATTTTGGTCTGTTAAAAAGTATAAGGATGTCAAAATAACAATTTTAAAGTAAGGATTAAGATGTCTATTTTAAAAGTACAATGACTAAAATAAATTAAAAGTTAAAAATAGAGGGACCAAATTTTTTTTTTAAATCTTAATATATTTCAGATTTTAAATTGGGTAGGGAGAAGAAGACGACCATTTGGTTGATTGTTTAAGTTAGAGGTAAAAATAAATCATTCAATTTTCTTAGTTTTGAAGTGTCAACCAAGAATTAAACCAAATTGATTGATGTTATAAAGAAGTGAATCAAACTGATGTTGAATAAAGAACAAAACTAAATAGAATGTTTATTATGCGTTTCGGTTTACTGTCGGTTTGGTTCTCGATTTTTGCCATTTTTGCCATTTTTTCTTTTAACTTTTCATTTTCATTTTTTTTTAAAATTTTTTTCAATTGGGTCTTTTTGCCTTTTTTTTCAAATTAAAATTGGACATTTTCTTTTTTATAGATTGCAATTGGACATTTTTATTATTTTCCTTGACCTTTCTCTAATGAACAAATATACATGCACATCATCTCAGTTCGGTTCGATTTTAGTTGGGGTTTTGAATTAGAAACCAATCTGAACCAATAATCTTTGTCTCCAAATTCAAACTAAATGTCCAATTTTATACTAAAAAACCAAACCAAACCAGTAGGTTGACTTGGTTGGATGTTTCAAATTTTTTGTCACAACTCCTAATTTTGGTGGTCAATGATTCATATGATATATTCATACATATTTTTTGACAATATATTATGTGGAGTCGGAAGTCAAATCTTTGATCTTGAGATTGATAGTAAAAGTTATATGACAATGTAGGACCGAAAGTCAGGAAATTGGTGGGTTTCAATTTATGAAGATGGGAAAGCGATCGGATATTTTCCAAAAGAGTTGTTTCCAAATCTAAGCAATGGGGCAAAACAAGTAGCTTGGGGAGGCATTGCAAAGAAAGGGAAGAATGGAATGAGCCCTCCATTAGGGAGTGGCAATTTACCTAATGGAAACTTTAGGGTTGCATGTTACATTAGAGGAATTAGATATGTGAATGATCAAAACTTGGGAATACCTCCAAAGCAAACTGAACTTCAACAATATATTGGGGACTCTAAATGTTATGGTTTGCAAGATGATAGAACTTGTGGGGGTTTTGATCAAATGTATTATTGCTTCACATATGGTGGACCAGGTGGGAAATGTGGGGCTGCTGTTAAAACTTAA

mRNA sequence

ATGAAAAGTGCAAGAAAGGAGAGTTCATCAAAATCAAAGCCTTCCATAAATCTTGAGCACAAATACTTGAAACATTGTCCAAGTGGATCAGTTCCTATTAGAAGAACTCAAAAGGAGGATTTTATGAGAATTAAGTCTCTTTCAAATTCATCAACACATGTGGTGTCTCTTTCAATGAACGAAAATCAGCCATACTATGGAGTGACTGGAACAATGTCTGCTTACAATTTAAGTGTTGCTCAAGACCAAGCTTCATCTACAAACTTATGGGTTATTGGTGGCCCTCCACAACAGCTTAGTGTCATTCTTGCTGGATGGCAGGTTAAACATGGTCATTTGATAAGGTTTTTGTTTTATGTAAATCCAGCTGTAAATGGTGGTGACGACACAAGAATCAATGGGGCAAAACAAGTAGCTTGGGGAGGCATTGCAAAGAAAGGGAAGAATGGAATGAGCCCTCCATTAGGGAGTGGCAATTTACCTAATGGAAACTTTAGGGTTGCATGTTACATTAGAGGAATTAGATATGTGAATGATCAAAACTTGGGAATACCTCCAAAGCAAACTGAACTTCAACAATATATTGGGGACTCTAAATGTTATGGTTTGCAAGATGATAGAACTTGTGGGGGTTTTGATCAAATGTATTATTGCTTCACATATGGTGGACCAGGTGGGAAATGTGGGGCTGCTGTTAAAACTTAA

Coding sequence (CDS)

ATGAAAAGTGCAAGAAAGGAGAGTTCATCAAAATCAAAGCCTTCCATAAATCTTGAGCACAAATACTTGAAACATTGTCCAAGTGGATCAGTTCCTATTAGAAGAACTCAAAAGGAGGATTTTATGAGAATTAAGTCTCTTTCAAATTCATCAACACATGTGGTGTCTCTTTCAATGAACGAAAATCAGCCATACTATGGAGTGACTGGAACAATGTCTGCTTACAATTTAAGTGTTGCTCAAGACCAAGCTTCATCTACAAACTTATGGGTTATTGGTGGCCCTCCACAACAGCTTAGTGTCATTCTTGCTGGATGGCAGGTTAAACATGGTCATTTGATAAGGTTTTTGTTTTATGTAAATCCAGCTGTAAATGGTGGTGACGACACAAGAATCAATGGGGCAAAACAAGTAGCTTGGGGAGGCATTGCAAAGAAAGGGAAGAATGGAATGAGCCCTCCATTAGGGAGTGGCAATTTACCTAATGGAAACTTTAGGGTTGCATGTTACATTAGAGGAATTAGATATGTGAATGATCAAAACTTGGGAATACCTCCAAAGCAAACTGAACTTCAACAATATATTGGGGACTCTAAATGTTATGGTTTGCAAGATGATAGAACTTGTGGGGGTTTTGATCAAATGTATTATTGCTTCACATATGGTGGACCAGGTGGGAAATGTGGGGCTGCTGTTAAAACTTAA

Protein sequence

MKSARKESSSKSKPSINLEHKYLKHCPSGSVPIRRTQKEDFMRIKSLSNSSTHVVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILAGWQVKHGHLIRFLFYVNPAVNGGDDTRINGAKQVAWGGIAKKGKNGMSPPLGSGNLPNGNFRVACYIRGIRYVNDQNLGIPPKQTELQQYIGDSKCYGLQDDRTCGGFDQMYYCFTYGGPGGKCGAAVKT
Homology
BLAST of Lsi07G012030 vs. ExPASy TrEMBL
Match: A0A6J1CVJ6 (uncharacterized protein LOC111014777 OS=Momordica charantia OX=3673 GN=LOC111014777 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 4.6e-44
Identity = 111/276 (40.22%), Postives = 149/276 (53.99%), Query Frame = 0

Query: 4   ARKESSSKSKPSINLEHKYLKHCPSGSVPIRRTQKEDFMRIKSLSNS------------- 63
           ++  SSS+ K  IN  +   + CP+G VPIRRT K+D +RI+SLS+              
Sbjct: 93  SKDSSSSRDKSFINNNN---RACPAGYVPIRRTIKKDLIRIRSLSSKEPTGIKTSIKGGV 152

Query: 64  ----STHVVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILAGW 123
               +  VVS++M +   YYG +G++S YNLSVAQDQ+SS+N+W+IGGPPQ  +VILAGW
Sbjct: 153 DFPYNQDVVSVAMKKGIKYYGASGSVSVYNLSVAQDQSSSSNIWIIGGPPQAPNVILAGW 212

Query: 124 QVKHGHLIRFLFYVNPAVNGGDDTRI---------------------------------- 183
           Q            VNP +NG   TR+                                  
Sbjct: 213 Q------------VNPMINGDSLTRMFVYWTDRPTGNWWLAVGESHKTIGYWPKELFGHL 272

Query: 184 -NGAKQVAWGGIAKKGKNGMSPPLGSGNLPN-GNFRVACYIRGIRYVNDQNLGIPPKQTE 227
            +G +QVAWGGIAK   NGMSPPLG+G+ PN   +  ACY R + YV++ N G  P    
Sbjct: 273 NDGTEQVAWGGIAKPSPNGMSPPLGNGHKPNYSKYDDACYFRYMNYVDENNKGQFPANEN 332

BLAST of Lsi07G012030 vs. ExPASy TrEMBL
Match: A0A6J1CVW9 (uncharacterized protein LOC111014774 OS=Momordica charantia OX=3673 GN=LOC111014774 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.0e-35
Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = 0

Query: 45  KSLSNSSTHVVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILA 104
           K  ++S  +VVSL +     YYGV G  S YNLSVAQDQ+SS+N+W++GGPP+ L+V   
Sbjct: 95  KDSTSSKNNVVSLGLKRGIQYYGVGGYTSVYNLSVAQDQSSSSNIWIVGGPPETLNV--- 154

Query: 105 GWQVKHGHLIRFLFYVNPAVNG-------GDDTRI------------NGAKQVAWGGIAK 164
              +    L R   Y      G          T I            +GA+QVAWGGIAK
Sbjct: 155 NPTINGDSLTRMFVYWTDRSTGDWWLAVSDSQTTIGYWPKELFGHLNDGAEQVAWGGIAK 214

Query: 165 KGKNGMSPPLGSGNLP-NGNFRVACYIRGIRYVNDQNLGIPPKQTELQQYIGDSKCYGLQ 224
              NGMSPPLG+G+ P NG +  ACY + I Y++  N G+ P    +  ++ +S CYGL 
Sbjct: 215 PSPNGMSPPLGNGHKPNNGKYNEACYFKSINYIDGNNNGVDPAYENIVSHVSNSDCYGLF 274

Query: 225 DDRTCGGFDQMYYCFTYGGPGG 227
           D       D MY+CFT+GGPGG
Sbjct: 275 DGAGTCAADNMYFCFTFGGPGG 293

BLAST of Lsi07G012030 vs. ExPASy TrEMBL
Match: W9RN49 (Neprosin domain-containing protein OS=Morus notabilis OX=981085 GN=L484_023259 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.2e-33
Identity = 90/225 (40.00%), Postives = 126/225 (56.00%), Query Frame = 0

Query: 13  KPSINLEHKYLKHCPSGSVPIRRTQKEDFMRIKSLSN-------SSTHVVSLSMNENQPY 72
           K  + ++ +  + CP G+VPI+RT KE  +R +SL +       S   VVSL +      
Sbjct: 2   KHILEIQWETTEECPVGTVPIQRTTKEHLVRARSLLDDPKKTDLSRQSVVSLLLKPKFRI 61

Query: 73  YGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILAGW-QVKHGHLIRFLFYVNPAV 132
           YG  G +S  +L +A DQ SS ++W+  GP   L+ I AGW   K G+   F+   N  +
Sbjct: 62  YGAGGRVSIQSLVLAPDQFSSADVWIQSGPSYSLNYIAAGWMDRKTGNWWFFVSDRNQDI 121

Query: 133 NGGDDTRINGAKQVAWGGIAKKGKNGMSPPLGSGNLPNGNFRVACYIRGIRYVNDQNLGI 192
             G   R    K VAWGGIAK GK G+SP +G+G+ P+GN+R ACY   + YVN++N  +
Sbjct: 122 PVGYWPR----KLVAWGGIAKPGKKGISPRMGNGHFPDGNYRHACYFSHVHYVNNKNKMV 181

Query: 193 PPKQTELQQYIGDSKCYGLQDDRTCGGFDQMYYCFTYGGPGGKCG 230
           PP      Q +   KCY L++D      D + Y FT+GGPGGKCG
Sbjct: 182 PPGNPCTFQNVDKPKCYRLKNDLLLHQKD-LGYSFTFGGPGGKCG 221

BLAST of Lsi07G012030 vs. ExPASy TrEMBL
Match: A0A1R3KA80 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10038 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.8e-30
Identity = 83/215 (38.60%), Postives = 106/215 (49.30%), Query Frame = 0

Query: 54  VVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPP---QQLSVILAGWQVKH 113
           VV L M E   YYG+ G + AYNLSV   Q SS NLWV  GP     QL+VIL GW    
Sbjct: 519 VVQLGMKEGPIYYGIYGDVDAYNLSVPDQQFSSANLWVQNGPVDKLDQLNVILGGWA--- 578

Query: 114 GHLIRFLFYVNPAVNGGDDTRI------------------------------------NG 173
                    V+P +NG   TR+                                    NG
Sbjct: 579 ---------VSPNLNGDSLTRLFTYWFGDHETGNWWCAISDWKTFVGYWPKELLHKLSNG 638

Query: 174 AKQVAWGGIAKKGKNGMSPPLGSGNLPNGNFRVACYIRGIRYVNDQNLGIPPKQTELQQY 230
           A  VAWGGIA   K G SPP+GSG+ PN ++  +C+ + ++++N  +  + P      QY
Sbjct: 639 ANYVAWGGIAIADKQGNSPPMGSGHYPNNDYTCSCFFKSVKFMNYLSF-LTPDNNATIQY 698

BLAST of Lsi07G012030 vs. ExPASy TrEMBL
Match: V4SWW2 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012304mg PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.5e-29
Identity = 90/266 (33.83%), Postives = 119/266 (44.74%), Query Frame = 0

Query: 47  LSNSSTHVVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILAGW 106
           L N     V++ M ++ PY+GV G +  +NL+VA+DQ S TN+W+  GPP QL+VILAGW
Sbjct: 53  LKNHKVQTVNVGMKKDVPYFGVDGRLEVWNLTVAKDQYSFTNMWIQNGPPDQLNVILAGW 112

Query: 107 QVKHGHLIRFLFYVNPAVNGGDDTRI---------------------------------- 166
                        V+PA+NG   TR+                                  
Sbjct: 113 T------------VSPAINGDQLTRLFTFWTADGARTTGCYNQLCPGFVLTNCSITPNYP 172

Query: 167 -------------------------------------------------NGAKQVAWGGI 226
                                                             GA+ VAWGGI
Sbjct: 173 LLLTSTYEEQYDIKILIYQDQPTGNWWLVLSDDNVFVGYWPKELFNHLSGGAETVAWGGI 232

Query: 227 AKKGKNGMSPPLGSGNLPNGNFRVACYIRGIRYVNDQNLGIPPKQTELQQYIGDSKCYGL 230
           A  GKNG+SPP+GSG L N +FR  CYIR I+YV+ QN    P    L+Q++  S CYGL
Sbjct: 233 AIAGKNGVSPPMGSG-LLNLSFRSTCYIRNIQYVDTQNKFRNP-DGALEQHLDRSTCYGL 292

BLAST of Lsi07G012030 vs. NCBI nr
Match: XP_022145288.1 (uncharacterized protein LOC111014777 [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 9.5e-44
Identity = 111/276 (40.22%), Postives = 149/276 (53.99%), Query Frame = 0

Query: 4   ARKESSSKSKPSINLEHKYLKHCPSGSVPIRRTQKEDFMRIKSLSNS------------- 63
           ++  SSS+ K  IN  +   + CP+G VPIRRT K+D +RI+SLS+              
Sbjct: 93  SKDSSSSRDKSFINNNN---RACPAGYVPIRRTIKKDLIRIRSLSSKEPTGIKTSIKGGV 152

Query: 64  ----STHVVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILAGW 123
               +  VVS++M +   YYG +G++S YNLSVAQDQ+SS+N+W+IGGPPQ  +VILAGW
Sbjct: 153 DFPYNQDVVSVAMKKGIKYYGASGSVSVYNLSVAQDQSSSSNIWIIGGPPQAPNVILAGW 212

Query: 124 QVKHGHLIRFLFYVNPAVNGGDDTRI---------------------------------- 183
           Q            VNP +NG   TR+                                  
Sbjct: 213 Q------------VNPMINGDSLTRMFVYWTDRPTGNWWLAVGESHKTIGYWPKELFGHL 272

Query: 184 -NGAKQVAWGGIAKKGKNGMSPPLGSGNLPN-GNFRVACYIRGIRYVNDQNLGIPPKQTE 227
            +G +QVAWGGIAK   NGMSPPLG+G+ PN   +  ACY R + YV++ N G  P    
Sbjct: 273 NDGTEQVAWGGIAKPSPNGMSPPLGNGHKPNYSKYDDACYFRYMNYVDENNKGQFPANEN 332

BLAST of Lsi07G012030 vs. NCBI nr
Match: XP_024038072.1 (uncharacterized protein LOC18039972 [Citrus clementina] >XP_024948531.1 uncharacterized protein LOC112495883 [Citrus sinensis])

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-35
Identity = 111/329 (33.74%), Postives = 148/329 (44.98%), Query Frame = 0

Query: 3   SARKESSSKSKPSINLEHKYLKH----CPSGSVPIRRTQKEDFMRIKSLSNSST------ 62
           SA+K S SK+         Y++H    CP G+VPIRRT KED ++  S+   S       
Sbjct: 91  SAKKSSKSKT--------SYIRHERESCPDGTVPIRRTSKEDLIKAGSMPKESMTQIGPQ 150

Query: 63  ---------HVVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVIL 122
                    H V++ M ++ PY+GV G +  +NL+VA+DQ S TN+W+  GPP QL+VIL
Sbjct: 151 TSFPAGHRFHTVNVGMKKDVPYFGVDGRLEVWNLTVAKDQYSFTNMWIQNGPPDQLNVIL 210

Query: 123 AGWQVKHGHLIRFLFYVNPAVNGGDDTRI------------------------------- 182
           AGW             V+PA+NG   TR+                               
Sbjct: 211 AGWT------------VSPAINGDQLTRLFTFWTADGARTTGCYNQLCPGFVLTNCSITP 270

Query: 183 ----------------------------------------------------NGAKQVAW 230
                                                                GA+ VAW
Sbjct: 271 NYPLLLTSTYEEQYDIKILIYQDQPTGNWWLVLSDDNVFVGYWPKELFNHLSGGAETVAW 330

BLAST of Lsi07G012030 vs. NCBI nr
Match: XP_022145286.1 (uncharacterized protein LOC111014774 [Momordica charantia])

HSP 1 Score: 158.7 bits (400), Expect = 6.2e-35
Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = 0

Query: 45  KSLSNSSTHVVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILA 104
           K  ++S  +VVSL +     YYGV G  S YNLSVAQDQ+SS+N+W++GGPP+ L+V   
Sbjct: 95  KDSTSSKNNVVSLGLKRGIQYYGVGGYTSVYNLSVAQDQSSSSNIWIVGGPPETLNV--- 154

Query: 105 GWQVKHGHLIRFLFYVNPAVNG-------GDDTRI------------NGAKQVAWGGIAK 164
              +    L R   Y      G          T I            +GA+QVAWGGIAK
Sbjct: 155 NPTINGDSLTRMFVYWTDRSTGDWWLAVSDSQTTIGYWPKELFGHLNDGAEQVAWGGIAK 214

Query: 165 KGKNGMSPPLGSGNLP-NGNFRVACYIRGIRYVNDQNLGIPPKQTELQQYIGDSKCYGLQ 224
              NGMSPPLG+G+ P NG +  ACY + I Y++  N G+ P    +  ++ +S CYGL 
Sbjct: 215 PSPNGMSPPLGNGHKPNNGKYNEACYFKSINYIDGNNNGVDPAYENIVSHVSNSDCYGLF 274

Query: 225 DDRTCGGFDQMYYCFTYGGPGG 227
           D       D MY+CFT+GGPGG
Sbjct: 275 DGAGTCAADNMYFCFTFGGPGG 293

BLAST of Lsi07G012030 vs. NCBI nr
Match: EXB99729.1 (hypothetical protein L484_023259 [Morus notabilis])

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-32
Identity = 90/225 (40.00%), Postives = 126/225 (56.00%), Query Frame = 0

Query: 13  KPSINLEHKYLKHCPSGSVPIRRTQKEDFMRIKSLSN-------SSTHVVSLSMNENQPY 72
           K  + ++ +  + CP G+VPI+RT KE  +R +SL +       S   VVSL +      
Sbjct: 2   KHILEIQWETTEECPVGTVPIQRTTKEHLVRARSLLDDPKKTDLSRQSVVSLLLKPKFRI 61

Query: 73  YGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILAGW-QVKHGHLIRFLFYVNPAV 132
           YG  G +S  +L +A DQ SS ++W+  GP   L+ I AGW   K G+   F+   N  +
Sbjct: 62  YGAGGRVSIQSLVLAPDQFSSADVWIQSGPSYSLNYIAAGWMDRKTGNWWFFVSDRNQDI 121

Query: 133 NGGDDTRINGAKQVAWGGIAKKGKNGMSPPLGSGNLPNGNFRVACYIRGIRYVNDQNLGI 192
             G   R    K VAWGGIAK GK G+SP +G+G+ P+GN+R ACY   + YVN++N  +
Sbjct: 122 PVGYWPR----KLVAWGGIAKPGKKGISPRMGNGHFPDGNYRHACYFSHVHYVNNKNKMV 181

Query: 193 PPKQTELQQYIGDSKCYGLQDDRTCGGFDQMYYCFTYGGPGGKCG 230
           PP      Q +   KCY L++D      D + Y FT+GGPGGKCG
Sbjct: 182 PPGNPCTFQNVDKPKCYRLKNDLLLHQKD-LGYSFTFGGPGGKCG 221

BLAST of Lsi07G012030 vs. NCBI nr
Match: OMP03992.1 (hypothetical protein COLO4_10038 [Corchorus olitorius])

HSP 1 Score: 141.7 bits (356), Expect = 7.8e-30
Identity = 83/215 (38.60%), Postives = 106/215 (49.30%), Query Frame = 0

Query: 54  VVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPP---QQLSVILAGWQVKH 113
           VV L M E   YYG+ G + AYNLSV   Q SS NLWV  GP     QL+VIL GW    
Sbjct: 519 VVQLGMKEGPIYYGIYGDVDAYNLSVPDQQFSSANLWVQNGPVDKLDQLNVILGGWA--- 578

Query: 114 GHLIRFLFYVNPAVNGGDDTRI------------------------------------NG 173
                    V+P +NG   TR+                                    NG
Sbjct: 579 ---------VSPNLNGDSLTRLFTYWFGDHETGNWWCAISDWKTFVGYWPKELLHKLSNG 638

Query: 174 AKQVAWGGIAKKGKNGMSPPLGSGNLPNGNFRVACYIRGIRYVNDQNLGIPPKQTELQQY 230
           A  VAWGGIA   K G SPP+GSG+ PN ++  +C+ + ++++N  +  + P      QY
Sbjct: 639 ANYVAWGGIAIADKQGNSPPMGSGHYPNNDYTCSCFFKSVKFMNYLSF-LTPDNNATIQY 698

BLAST of Lsi07G012030 vs. TAIR 10
Match: AT5G11660.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-16
Identity = 75/311 (24.12%), Postives = 127/311 (40.84%), Query Frame = 0

Query: 1   MKSARKESSSKSKPSINLEHKYLKHCPSGSVPIRRTQKEDFMRIK----------SLSNS 60
           MK +   S  KS+    +E K +  CP+G+VPI R  KE   R +          ++ + 
Sbjct: 1   MKPSFSISKPKSQVKNKIEGKKIIECPNGTVPILRNTKEYVARAQYWEKKHFNPHTVGSH 60

Query: 61  STHVVSLSMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILAGW---- 120
            TH   +    + PY+G+   MS ++L++++DQ S  +++V  G  ++++ I  GW    
Sbjct: 61  GTHYAGVKSQGDGPYHGLAAYMSVHDLNISRDQTSYASIFVGSGDNKKINFIQTGWMVNP 120

Query: 121 -------------------------------QVKHGHLIRFLF----------------- 180
                                          QV    L+   F                 
Sbjct: 121 SLFGDGRTWSFGVWKGANGTGCYNTICPGFVQVSKTDLLSAPFPYPHKGQERAVYASIVQ 180

Query: 181 -------------YVNPAVNGG------DDTRINGAKQVAWGGIAKKGKNGMSPPLGSGN 230
                        Y  P V+ G       D   N    V   G  +   +G+SPP+G+G 
Sbjct: 181 EKDIGNWWVTDVRYDRPDVHIGYWPKELFDLIGNSVDMVGVAGAVQASPSGISPPMGNGQ 240

BLAST of Lsi07G012030 vs. TAIR 10
Match: AT5G05030.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 56.2 bits (134), Expect = 4.0e-08
Identity = 30/111 (27.03%), Postives = 57/111 (51.35%), Query Frame = 0

Query: 8   SSSKSKPSINLEHKYLKHCPSGSVPIRRTQK----------EDFMRIKSLSNSSTHVVSL 67
           S  K++     E K +  CP+G+VPI R  K          E  +   ++ +  TH+  +
Sbjct: 65  SKPKNQVKGESERKNIIECPNGTVPIIRNTKKYVANAQYWTEKHLNPLTIDSHGTHIAGV 124

Query: 68  SMNENQPYYGVTGTMSAYNLSVAQDQASSTNLWVIGGPPQQLSVILAGWQV 109
              +  PY GV  ++S ++L++++DQAS  N+++  G   +++ I  GW +
Sbjct: 125 RTTDQGPYRGVIASLSVHDLNISRDQASYANIYIGSGIYDKVNFIQTGWMI 175

BLAST of Lsi07G012030 vs. TAIR 10
Match: AT4G23390.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 52.8 bits (125), Expect = 4.4e-07
Identity = 29/95 (30.53%), Postives = 43/95 (45.26%), Query Frame = 0

Query: 133 NGAKQVAWGGIAKKGKNGMSPPLGSGNLPNGNFRVACYIRGIRYVNDQNLGI-PPKQTEL 192
           +GA  V WGG         SP +GSG+ P   F+ A Y+ G++ + D    +  P  + L
Sbjct: 306 DGASAVFWGGEVYSSVKEKSPSMGSGHFPQEGFKKAAYVNGLKIITDITKEVSSPLASAL 365

Query: 193 QQYIGDSKCYGLQDDRTCGGFDQMYYCFTYGGPGG 227
           + +     CY +Q     G F        +GGPGG
Sbjct: 366 KTFASSPNCYNVQKILGVGEF--WSRAILFGGPGG 398

BLAST of Lsi07G012030 vs. TAIR 10
Match: AT1G10750.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 52.4 bits (124), Expect = 5.8e-07
Identity = 32/98 (32.65%), Postives = 51/98 (52.04%), Query Frame = 0

Query: 26  CPSGSVPIRRTQKEDFMRIKSLS-------------NSSTHVVSLSMNENQPYYGVTGTM 85
           CP G+VPIRRT++ED +R  S+S             +S+ H  ++     + YYG   ++
Sbjct: 179 CPEGTVPIRRTKEEDILRANSVSSFGKKLRHYRRDTSSNGHEHAVGYVSGEKYYGAKASI 238

Query: 86  SAYNLSVA-QDQASSTNLWVIGGP-PQQLSVILAGWQV 109
           + +   V  Q + S + +W+I G     L+ I AGWQV
Sbjct: 239 NVWAPQVQNQYEFSLSQIWIISGSFGNDLNTIEAGWQV 276

BLAST of Lsi07G012030 vs. TAIR 10
Match: AT5G56530.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 52.0 bits (123), Expect = 7.6e-07
Identity = 44/151 (29.14%), Postives = 70/151 (46.36%), Query Frame = 0

Query: 9   SSKSKPSIN----LEHKYLKHCPSGSVPIRRTQKEDFMRIKS------------------ 68
           S K K S+N    L H+    C  G++P+RRT+KED +R  S                  
Sbjct: 104 SEKPKESVNPITQLWHQN-GVCSEGTIPVRRTKKEDVLRASSVKRYGKKKHLSVPLPRSA 163

Query: 69  ---LSNSSTHVVSLSMNENQPYYGVTGTMSAYNLSV-AQDQASSTNLWVIGGP-PQQLSV 128
              L N S H  +++  E   +YG   T++ +   V + ++ S + LW++GG   Q L+ 
Sbjct: 164 DPDLINQSGHQHAIAYVEGGKFYGAKATINVWEPKVQSSNEFSLSQLWILGGSFGQDLNS 223

Query: 129 ILAGWQVKHGHLIRFLFYVNPAVNGGDDTRI 133
           I AGWQ            V+P + G ++TR+
Sbjct: 224 IEAGWQ------------VSPDLYGDNNTRL 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CVJ64.6e-4440.22uncharacterized protein LOC111014777 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1CVW93.0e-3542.08uncharacterized protein LOC111014774 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
W9RN496.2e-3340.00Neprosin domain-containing protein OS=Morus notabilis OX=981085 GN=L484_023259 P... [more]
A0A1R3KA803.8e-3038.60Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10038 PE=4 SV=1[more]
V4SWW22.5e-2933.83Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012304mg PE=4 ... [more]
Match NameE-valueIdentityDescription
XP_022145288.19.5e-4440.22uncharacterized protein LOC111014777 [Momordica charantia][more]
XP_024038072.11.2e-3533.74uncharacterized protein LOC18039972 [Citrus clementina] >XP_024948531.1 uncharac... [more]
XP_022145286.16.2e-3542.08uncharacterized protein LOC111014774 [Momordica charantia][more]
EXB99729.11.3e-3240.00hypothetical protein L484_023259 [Morus notabilis][more]
OMP03992.17.8e-3038.60hypothetical protein COLO4_10038 [Corchorus olitorius][more]
Match NameE-valueIdentityDescription
AT5G11660.13.1e-1624.12Protein of Unknown Function (DUF239) [more]
AT5G05030.14.0e-0827.03Protein of Unknown Function (DUF239) [more]
AT4G23390.14.4e-0730.53Protein of Unknown Function (DUF239) [more]
AT1G10750.15.8e-0732.65Protein of Unknown Function (DUF239) [more]
AT5G56530.17.6e-0729.14Protein of Unknown Function (DUF239) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004314NeprosinPFAMPF03080Neprosincoord: 133..224
e-value: 3.6E-14
score: 52.6
NoneNo IPR availablePANTHERPTHR31589:SF133OS08G0411100 PROTEINcoord: 133..225
coord: 27..112
NoneNo IPR availablePANTHERPTHR31589PROTEIN, PUTATIVE (DUF239)-RELATED-RELATEDcoord: 133..225
coord: 27..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G012030.1Lsi07G012030.1mRNA