Lsi07G011510 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTCGACGTGGAGATTCATACCTTTTAACCTTTAGAGAGGTAAGAAATGTGTTTATCCTAATTCTCACGTGAGACTTATATACACAACAATGTTACTCTATTCACCACTCAACTATTGAAGGTTTCTTTTTCTACCATTGATGTACTGATAACAGTCAAGATCCAATTGCAGAGGTTACTATTAATTAATTACAATCTAAAATATAAATATAAATCTAAGATTTTCGAATATATATGATTTTCTCGAACAACCTTCCTTTCTTTTCATTGAATTTGTGGACCAAATTTGATGGAGGGCATTGAGAAATTGTACAATTCAAAGAACCAAGGATTGAGTAATTTGGATTTCGGAGTTTTCACCTCTTCTCCATTCTACACCTCTCACTCCTCATCCATAACCATCCAATCCACCATTGCCACGTGGCATCACAAATATCCAAAACTGAATGAGGTCCACCACAAAGTTCCTCTTATCACTGTTGTTATCAACTCATCAAGAACTCCATCTTCAATCAGAAAAATCCAACACTTCAACTTCTCTTAAGAAAGACATGGAAATGACAGTTTTACCAGTGTCCAATGTCAAAAACTCACACACAACCCTTCTTTCCAACCTAAATTTTACAAAGAAATCAGGGGTAATTGAAGAAACTTAGCAGTAAGTTAACACATTACAGCTTTCATCACCACCCCCAAGATTTTTCCTTACCATACTGTTCTCTGTTTTCTTGATCCATCTTTACCCTCTGCAAGGAAAAAACAGAAAGGAAAAGAGAAGGCCAAACCCATTACGTTTCAGAAAACCAATTTGGAGTAACCAAAGATCCAAATTTCAGATCATGGCAACAGTCTCTACAGCCAAGTCCCTAAACTACACAAATTCAGTCTATCCATCATCAAAAACAAGCTTGGGCCGTCACCAAGAACAGGTAATTTTCGTCACAACTGGCAAAAAATCCAAGAGAGGCAAAGCCAACACAACTCCATGGCTGATAACCTGCTCAGCAGGTGACCAACAGACAGTTGTGATTGGTCTAGCAGCAGATTCAGGGTGTGGGAAAAGCACTTTTATGAGAAGGCTAACCAGTGTATTTGGAGGTGCAGCAAAGCCTCCAAGAGGTGGAAATCCAGACTCCAACACACTCATAAGTGACACTACAACTGTGATATGTTTAGATGATTACCATTCATTGGATAGAACCGGAAGAAAAGAGAAGGGAGTTACTGCACTTGACCCAAGAGCCAATGATTTTGATCTCATGTATGAGCAAGTTAAGGCTCTCAAAGATGGAATTGCAGTTGAGAAGCCTATTTATAATCATGTCACAGGTCTTCTAGATCCACCTGAGCTTATTAAGCCTCCTAAGATCCTTGTCATTGAAGGCCTACACCCAATGTAAGTTATTTTACCTCCAACTTCTTATGTCAGAATATGAATCCAATAAAGAATATTCCTTATTAGGTCATCTCCGAGCGGTTTCTCAATCAATTAGTTATGCAATACCGATTAACTTTAGGTGTGTTATCAATATCTCCATGTTCATAAATATTTTAAGACATAAACTTCTCAAACCTTTTTTCTTCTTGGGAAAAAGGGGGAAAGGAATTGCATAGATATCTTCTTTTTTACAACATCCTCGCCCTTCCTCCTACTTTGCTTTTTAAAATATTAGTGGAAAGCGAATAACCAAACAAATGAACATGTAGGTAGAAATGGTGTTTAAAACTTGATTTTTAAAAATTAAAAAAAAAAATAAAACAAAATGGTTACCAAAAAGAATAAAACTCTTTGATTATGAAAATACTAATTAATTTTATCTGGAATAAAACAATAAAAATAGCTCTAAATTTCTTCTGTATATTGACTAAAACCGTAACTATTTTCTGTACCACAAGCAAGCTGAAGGAGATTCTGAAAGGGTTAATAACCACTATTGAAGTGTCAAGTGAACTAATATTCACATTTCTTCCCCATTTTTCTTCCTTTTAGTATCCGCGCTAAATCCTTTAATTTTTTTTATATTCGTAAGTGTTCGGACTAGCTTACACGCACCTCAACTAATTTTATGGGACAACCTGCCTGACCCTACAACATTTGGGTGTCAAAAAAAACCCTAGGATATTAAATCCTACGTAGGTGACCACCATAGATTGAATCCATTACCCTTTAGTCCTTTGGTCCTTTTTTTTATGTTCCCACTATCACTAGTTCAACTCATATCACTAGTTCAACTCATGATGGTTCTAAATCCTTTAATTTAAGAAAATGTTAG TTTTTTTTTCGACGTGGAGATTCATACCTTTTAACCTTTAGAGAGGTAAGAAATGTGTTTATCCTAATTCTCACGTGAGACTTATATACACAACAATGTTACTCTATTCACCACTCAACTATTGAAGGTTTCTTTTTCTACCATTGATGTACTGATAACAGTCAAGATCCAATTGCAGAGGTTACTATTAATTAATTACAATCTAAAATATAAATATAAATCTAAGATTTTCGAATATATATGATTTTCTCGAACAACCTTCCTTTCTTTTCATTGAATTTGTGGACCAAATTTGATGGAGGGCATTGAGAAATTGTACAATTCAAAGAACCAAGGATTGAGTAATTTGGATTTCGGAGTTTTCACCTCTTCTCCATTCTACACCTCTCACTCCTCATCCATAACCATCCAATCCACCATTGCCACGTGGCATCACAAATATCCAAAACTGAATGAGGTCCACCACAAAGTTCCTCTTATCACTGTTGTTATCAACTCATCAAGAACTCCATCTTCAATCAGAAAAATCCAACACTTCAACTTCTCTTAAGAAAGACATGGAAATGACAGTTTTACCAGTGTCCAATGTCAAAAACTCACACACAACCCTTCTTTCCAACCTAAATTTTACAAAGAAATCAGGGGTAATTGAAGAAACTTAGCAGTAAGTTAACACATTACAGCTTTCATCACCACCCCCAAGATTTTTCCTTACCATACTGTTCTCTGTTTTCTTGATCCATCTTTACCCTCTGCAAGGAAAAAACAGAAAGGAAAAGAGAAGGCCAAACCCATTACGTTTCAGAAAACCAATTTGGAGTAACCAAAGATCCAAATTTCAGATCATGGCAACAGTCTCTACAGCCAAGTCCCTAAACTACACAAATTCAGTCTATCCATCATCAAAAACAAGCTTGGGCCGTCACCAAGAACAGGTAATTTTCGTCACAACTGGCAAAAAATCCAAGAGAGGCAAAGCCAACACAACTCCATGGCTGATAACCTGCTCAGCAGGTGACCAACAGACAGTTGTGATTGGTCTAGCAGCAGATTCAGGGTGTGGGAAAAGCACTTTTATGAGAAGGCTAACCAGTGTATTTGGAGGTGCAGCAAAGCCTCCAAGAGGTGGAAATCCAGACTCCAACACACTCATAAGTGACACTACAACTGTGATATGTTTAGATGATTACCATTCATTGGATAGAACCGGAAGAAAAGAGAAGGGAGTTACTGCACTTGACCCAAGAGCCAATGATTTTGATCTCATGTATGAGCAAGTTAAGGCTCTCAAAGATGGAATTGCAGTTGAGAAGCCTATTTATAATCATGTCACAGGTCTTCTAGATCCACCTGAGCTTATTAAGCCTCCTAAGATCCTTGTCATTGAAGGCCTACACCCAATTTCAACTCATATCACTAGTTCAACTCATGATGGTTCTAAATCCTTTAATTTAAGAAAATGTTAG ATGGCAACAGTCTCTACAGCCAAGTCCCTAAACTACACAAATTCAGTCTATCCATCATCAAAAACAAGCTTGGGCCGTCACCAAGAACAGGTAATTTTCGTCACAACTGGCAAAAAATCCAAGAGAGGCAAAGCCAACACAACTCCATGGCTGATAACCTGCTCAGCAGGTGACCAACAGACAGTTGTGATTGGTCTAGCAGCAGATTCAGGGTGTGGGAAAAGCACTTTTATGAGAAGGCTAACCAGTGTATTTGGAGGTGCAGCAAAGCCTCCAAGAGGTGGAAATCCAGACTCCAACACACTCATAAGTGACACTACAACTGTGATATGTTTAGATGATTACCATTCATTGGATAGAACCGGAAGAAAAGAGAAGGGAGTTACTGCACTTGACCCAAGAGCCAATGATTTTGATCTCATGTATGAGCAAGTTAAGGCTCTCAAAGATGGAATTGCAGTTGAGAAGCCTATTTATAATCATGTCACAGGTCTTCTAGATCCACCTGAGCTTATTAAGCCTCCTAAGATCCTTGTCATTGAAGGCCTACACCCAATTTCAACTCATATCACTAGTTCAACTCATGATGGTTCTAAATCCTTTAATTTAAGAAAATGTTAG MATVSTAKSLNYTNSVYPSSKTSLGRHQEQVIFVTTGKKSKRGKANTTPWLITCSAGDQQTVVIGLAADSGCGKSTFMRRLTSVFGGAAKPPRGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKDGIAVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPISTHITSSTHDGSKSFNLRKC Homology
BLAST of Lsi07G011510 vs. ExPASy Swiss-Prot
Match: P27774 (Phosphoribulokinase, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 3.4e-72 Identity = 138/173 (79.77%), Postives = 149/173 (86.13%), Query Frame = 0
BLAST of Lsi07G011510 vs. ExPASy Swiss-Prot
Match: P25697 (Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g32060 PE=1 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 2.8e-66 Identity = 132/186 (70.97%), Postives = 154/186 (82.80%), Query Frame = 0
BLAST of Lsi07G011510 vs. ExPASy Swiss-Prot
Match: P26302 (Phosphoribulokinase, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 4.7e-66 Identity = 130/181 (71.82%), Postives = 144/181 (79.56%), Query Frame = 0
BLAST of Lsi07G011510 vs. ExPASy Swiss-Prot
Match: P09559 (Phosphoribulokinase, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 3.4e-64 Identity = 124/167 (74.25%), Postives = 141/167 (84.43%), Query Frame = 0
BLAST of Lsi07G011510 vs. ExPASy Swiss-Prot
Match: P19824 (Phosphoribulokinase, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PRKA PE=1 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 9.3e-54 Identity = 104/144 (72.22%), Postives = 115/144 (79.86%), Query Frame = 0
BLAST of Lsi07G011510 vs. ExPASy TrEMBL
Match: A0A6J1HNB8 (Phosphoribulokinase OS=Cucurbita maxima OX=3661 GN=LOC111465210 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94 Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0
BLAST of Lsi07G011510 vs. ExPASy TrEMBL
Match: A0A6J1E6J1 (Phosphoribulokinase OS=Cucurbita moschata OX=3662 GN=LOC111431231 PE=3 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 7.3e-94 Identity = 176/187 (94.12%), Postives = 182/187 (97.33%), Query Frame = 0
BLAST of Lsi07G011510 vs. ExPASy TrEMBL
Match: A0A5A7UFL3 (Phosphoribulokinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001190 PE=3 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.5e-91 Identity = 172/187 (91.98%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of Lsi07G011510 vs. ExPASy TrEMBL
Match: A0A1S3BK48 (Phosphoribulokinase OS=Cucumis melo OX=3656 GN=LOC103490739 PE=3 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.5e-91 Identity = 172/187 (91.98%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of Lsi07G011510 vs. ExPASy TrEMBL
Match: A0A0A0L1R3 (Phosphoribulokinase OS=Cucumis sativus OX=3659 GN=Csa_3G006690 PE=3 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 7.5e-91 Identity = 171/187 (91.44%), Postives = 177/187 (94.65%), Query Frame = 0
BLAST of Lsi07G011510 vs. NCBI nr
Match: XP_038892200.1 (phosphoribulokinase, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 357.1 bits (915), Expect = 1.0e-94 Identity = 177/186 (95.16%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of Lsi07G011510 vs. NCBI nr
Match: XP_022965305.1 (phosphoribulokinase, chloroplastic-like [Cucurbita maxima] >XP_022965306.1 phosphoribulokinase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 355.9 bits (912), Expect = 2.3e-94 Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0
BLAST of Lsi07G011510 vs. NCBI nr
Match: XP_023552122.1 (phosphoribulokinase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 355.9 bits (912), Expect = 2.3e-94 Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0
BLAST of Lsi07G011510 vs. NCBI nr
Match: KAG7015781.1 (hypothetical protein SDJN02_23419, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93 Identity = 176/187 (94.12%), Postives = 182/187 (97.33%), Query Frame = 0
BLAST of Lsi07G011510 vs. NCBI nr
Match: XP_022923591.1 (phosphoribulokinase, chloroplastic-like [Cucurbita moschata] >XP_022923592.1 phosphoribulokinase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93 Identity = 176/187 (94.12%), Postives = 182/187 (97.33%), Query Frame = 0
BLAST of Lsi07G011510 vs. TAIR 10
Match: AT1G32060.1 (phosphoribulokinase ) HSP 1 Score: 253.1 bits (645), Expect = 2.0e-67 Identity = 132/186 (70.97%), Postives = 154/186 (82.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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