Lsi07G008530 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAATTTTATGGAAACCATATCCAATTAAGTGAAAAAAATTGAAAAGAACGAGTGGACGTCCTTCACTCTTACACTCTCCGTGGCTTATCTTTTTATGCCTCTTTCTCTCTCTTTCGCTCATCCTTCTTACGAGTTTCGACTGCTAGAATTCCGCCATGGAAATGGAAATGGTGAAGCTGTGGGTAGTGCTAAGCCTTGTGATGGTGATCCTGAGGCCTGCGTACTCGGAGTTTCCTCCGACCTGCAACCGCATCGAGTGCCCTAGCTACGACGTCATCGACTCCGGCGATGGGTTCGAGATTCGGCGCTACGATTCCCCTGTTTGGGCCTCCACCACTCCCATTTCCGACATCTCTCTCCGTGAAGCCACCAGAGCAGGCTTTCTCCAGTAACGCTACTTCTCCCCTTCTCTTCCTTCCCAATTCTTTCTTTTATTATCTAATTTTACTTCCTTCTCACTTGGATGCTTCCATTAGTTTTTCTCCAATTTCTCTAAACCCTAACTTGTCATCAAAACTCATCTTTCCTTATGCATAATATTTCATCATTCACCAATAATTGACTTTGTAATTTACAAACCCATTTACTCTAAATCTTAACATTAAAATCTAGAGACTTCAACGAACTAGATTGTTACTCGACACATTTGAACCTAAAAAAGAAACTAAGTTAGGTAATAATCTTAATATTTAGGAGTGAATTTAGTATGGAGTTATGAGTAGCAATTTTAAGAATAATAACTAAGTGTATGACACTATTTTAAAAAAAAAAATATAAATATAGAAAATTTATCAATGATAGACTTCTATTGCTGATAGACCATCTATGCCATAAAAGTCTACATCGATATTGTTATATATGCTAATTCCGGACACTCATGGATATAAAAAAAAAAAATTCATTAGCCATAAAATTTAATTTTATATTTAATTTGTAAAATTCTGTAATATTTGTAAGACTTGTTTGACACAAAATTTATGAGTATTACCTTGAATTTTTGGCATGTGATTCACAAAATTTATGTTTTTCTTTGAAATTGTTGGTTTGTGTCTTTTAATTTGATGTCTAATAGATTCATTACATTGTCTGATTTACTTTCTTTCCTTAGATTGTTCAATTACATTCAAGGAAAGAACAGTTACAATGAAAAGATAGAAATGACTGCACCGGTGATCACAGAGCTTTCTCCGAGCGATGGACCGTTTTGTGAATCATCATTTGTCGTTAGCTTCTACGTGCCGAAAGTGAACCAAGCAGATCCACCAGGAGCCAAAGGGCTTCATGTACAGAGATGGAACACTACATATGTTGCAGTTAGACAATTTGGAGGATTTGTTTCTGATGACAATATTGGAGGTGAAGCTGCTGCTTTGGATGAAAGTGTTTTTGACACAAAGTGGGGTGCAGCAATCAGCAAGAGCCGTGGTTCTGCCAGTGCTTCCATTTATACTGTGGCTCAGTACAATTCCCCTTTTGAGTTTGAAGATCGAGTCAATGAGATTTGGTTCTTGTTTGATATTCAAGATGTAGCTGCTCAGGCTTACAAACAATTTTAGTGTTTAATGCTTAAATAAAACTTTTTCTCTTCTTGTTCTTCATAAATCCTTCAATAAAATATGCTTACTTCCCTCTCTATTAGGGAGTTCTAGACATTGA GGAATTTTATGGAAACCATATCCAATTAAGTGAAAAAAATTGAAAAGAACGAGTGGACGTCCTTCACTCTTACACTCTCCGTGGCTTATCTTTTTATGCCTCTTTCTCTCTCTTTCGCTCATCCTTCTTACGAGTTTCGACTGCTAGAATTCCGCCATGGAAATGGAAATGGTGAAGCTGTGGGTAGTGCTAAGCCTTGTGATGGTGATCCTGAGGCCTGCGTACTCGGAGTTTCCTCCGACCTGCAACCGCATCGAGTGCCCTAGCTACGACGTCATCGACTCCGGCGATGGGTTCGAGATTCGGCGCTACGATTCCCCTGTTTGGGCCTCCACCACTCCCATTTCCGACATCTCTCTCCGTGAAGCCACCAGAGCAGGCTTTCTCCAATTGTTCAATTACATTCAAGGAAAGAACAGTTACAATGAAAAGATAGAAATGACTGCACCGGTGATCACAGAGCTTTCTCCGAGCGATGGACCGTTTTGTGAATCATCATTTGTCGTTAGCTTCTACGTGCCGAAAGTGAACCAAGCAGATCCACCAGGAGCCAAAGGGCTTCATGTACAGAGATGGAACACTACATATGTTGCAGTTAGACAATTTGGAGGATTTGTTTCTGATGACAATATTGGAGGTGAAGCTGCTGCTTTGGATGAAAGTGTTTTTGACACAAAGTGGGGTGCAGCAATCAGCAAGAGCCGTGGTTCTGCCAGTGCTTCCATTTATACTGTGGCTCAGTACAATTCCCCTTTTGAGTTTGAAGATCGAGTCAATGAGATTTGGTTCTTGTTTGATATTCAAGATGTAGCTGCTCAGGCTTACAAACAATTTTAGTGTTTAATGCTTAAATAAAACTTTTTCTCTTCTTGTTCTTCATAAATCCTTCAATAAAATATGCTTACTTCCCTCTCTATTAGGGAGTTCTAGACATTGA ATGGAAATGGAAATGGTGAAGCTGTGGGTAGTGCTAAGCCTTGTGATGGTGATCCTGAGGCCTGCGTACTCGGAGTTTCCTCCGACCTGCAACCGCATCGAGTGCCCTAGCTACGACGTCATCGACTCCGGCGATGGGTTCGAGATTCGGCGCTACGATTCCCCTGTTTGGGCCTCCACCACTCCCATTTCCGACATCTCTCTCCGTGAAGCCACCAGAGCAGGCTTTCTCCAATTGTTCAATTACATTCAAGGAAAGAACAGTTACAATGAAAAGATAGAAATGACTGCACCGGTGATCACAGAGCTTTCTCCGAGCGATGGACCGTTTTGTGAATCATCATTTGTCGTTAGCTTCTACGTGCCGAAAGTGAACCAAGCAGATCCACCAGGAGCCAAAGGGCTTCATGTACAGAGATGGAACACTACATATGTTGCAGTTAGACAATTTGGAGGATTTGTTTCTGATGACAATATTGGAGGTGAAGCTGCTGCTTTGGATGAAAGTGTTTTTGACACAAAGTGGGGTGCAGCAATCAGCAAGAGCCGTGGTTCTGCCAGTGCTTCCATTTATACTGTGGCTCAGTACAATTCCCCTTTTGAGTTTGAAGATCGAGTCAATGAGATTTGGTTCTTGTTTGATATTCAAGATGTAGCTGCTCAGGCTTACAAACAATTTTAG MEMEMVKLWVVLSLVMVILRPAYSEFPPTCNRIECPSYDVIDSGDGFEIRRYDSPVWASTTPISDISLREATRAGFLQLFNYIQGKNSYNEKIEMTAPVITELSPSDGPFCESSFVVSFYVPKVNQADPPGAKGLHVQRWNTTYVAVRQFGGFVSDDNIGGEAAALDESVFDTKWGAAISKSRGSASASIYTVAQYNSPFEFEDRVNEIWFLFDIQDVAAQAYKQF Homology
BLAST of Lsi07G008530 vs. ExPASy Swiss-Prot
Match: Q9Y5Z4 (Heme-binding protein 2 OS=Homo sapiens OX=9606 GN=HEBP2 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19 Identity = 60/174 (34.48%), Postives = 82/174 (47.13%), Query Frame = 0
BLAST of Lsi07G008530 vs. ExPASy Swiss-Prot
Match: Q9WU63 (Heme-binding protein 2 OS=Mus musculus OX=10090 GN=Hebp2 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19 Identity = 60/187 (32.09%), Postives = 87/187 (46.52%), Query Frame = 0
BLAST of Lsi07G008530 vs. ExPASy Swiss-Prot
Match: Q9SR77 (Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g10130 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06 Identity = 51/184 (27.72%), Postives = 79/184 (42.93%), Query Frame = 0
BLAST of Lsi07G008530 vs. ExPASy TrEMBL
Match: A0A0A0KVD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G075210 PE=3 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.0e-109 Identity = 193/220 (87.73%), Postives = 207/220 (94.09%), Query Frame = 0
BLAST of Lsi07G008530 vs. ExPASy TrEMBL
Match: A0A5A7V4M9 (Heme-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001260 PE=3 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 2.8e-107 Identity = 192/220 (87.27%), Postives = 205/220 (93.18%), Query Frame = 0
BLAST of Lsi07G008530 vs. ExPASy TrEMBL
Match: A0A1S3BSD4 (heme-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103492972 PE=3 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 2.8e-107 Identity = 192/220 (87.27%), Postives = 205/220 (93.18%), Query Frame = 0
BLAST of Lsi07G008530 vs. ExPASy TrEMBL
Match: A0A6J1EZ63 (heme-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437561 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 8.8e-101 Identity = 179/218 (82.11%), Postives = 196/218 (89.91%), Query Frame = 0
BLAST of Lsi07G008530 vs. ExPASy TrEMBL
Match: A0A6J1J8G7 (heme-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482697 PE=3 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.5e-100 Identity = 180/223 (80.72%), Postives = 198/223 (88.79%), Query Frame = 0
BLAST of Lsi07G008530 vs. NCBI nr
Match: XP_004137252.1 (heme-binding protein 2 [Cucumis sativus] >KGN53540.1 hypothetical protein Csa_015165 [Cucumis sativus]) HSP 1 Score: 404.4 bits (1038), Expect = 6.2e-109 Identity = 193/220 (87.73%), Postives = 207/220 (94.09%), Query Frame = 0
BLAST of Lsi07G008530 vs. NCBI nr
Match: XP_038903399.1 (heme-binding protein 2-like [Benincasa hispida]) HSP 1 Score: 399.1 bits (1024), Expect = 2.6e-107 Identity = 196/217 (90.32%), Postives = 205/217 (94.47%), Query Frame = 0
BLAST of Lsi07G008530 vs. NCBI nr
Match: XP_008451794.1 (PREDICTED: heme-binding protein 2 [Cucumis melo] >KAA0063003.1 heme-binding protein 2 [Cucumis melo var. makuwa] >TYK16344.1 heme-binding protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 397.9 bits (1021), Expect = 5.8e-107 Identity = 192/220 (87.27%), Postives = 205/220 (93.18%), Query Frame = 0
BLAST of Lsi07G008530 vs. NCBI nr
Match: XP_023552168.1 (heme-binding protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 379.0 bits (972), Expect = 2.8e-101 Identity = 181/218 (83.03%), Postives = 197/218 (90.37%), Query Frame = 0
BLAST of Lsi07G008530 vs. NCBI nr
Match: KAG6577056.1 (Heme-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100 Identity = 180/221 (81.45%), Postives = 197/221 (89.14%), Query Frame = 0
BLAST of Lsi07G008530 vs. TAIR 10
Match: AT1G17100.1 (SOUL heme-binding family protein ) HSP 1 Score: 278.9 bits (712), Expect = 3.7e-75 Identity = 130/194 (67.01%), Postives = 157/194 (80.93%), Query Frame = 0
BLAST of Lsi07G008530 vs. TAIR 10
Match: AT1G78450.1 (SOUL heme-binding family protein ) HSP 1 Score: 206.5 bits (524), Expect = 2.3e-53 Identity = 99/194 (51.03%), Postives = 134/194 (69.07%), Query Frame = 0
BLAST of Lsi07G008530 vs. TAIR 10
Match: AT1G78460.1 (SOUL heme-binding family protein ) HSP 1 Score: 166.4 bits (420), Expect = 2.7e-41 Identity = 96/222 (43.24%), Postives = 134/222 (60.36%), Query Frame = 0
BLAST of Lsi07G008530 vs. TAIR 10
Match: AT3G10130.1 (SOUL heme-binding family protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07 Identity = 51/184 (27.72%), Postives = 79/184 (42.93%), Query Frame = 0
BLAST of Lsi07G008530 vs. TAIR 10
Match: AT5G20140.1 (SOUL heme-binding family protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06 Identity = 41/170 (24.12%), Postives = 74/170 (43.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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