Lsi07G007880 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G007880
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	VQ motif-containing protein 22-like
Location	chr07: 8664685 .. 8665323 (-)
RNA-Seq Expression	Lsi07G007880
Synteny	Lsi07G007880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGGCCCTGGCGATTGGCTTCAATTTTACCATCAAAATCTTTCTTCCACGGCGGCGCCACCACCACCTTCCGATCAATCCAACCCCGAAATGATTTTCGTCGATCGAGTTTCTGACACCACCGCCTCCGGAAACACAGGCGGTTCGACTGGATTGAATCCGGAAGGTCGCGTAGGAAAGCCGGTTCGCCGCCGGTCCAGGGCATCTCGGCGGACTCCGACGACGTTGCTCAACACGGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACTGGCGGTCCAACTCCACCTTTCGCCTCATCGATTTCCCCCAATTTTTCTCTAGGGTTCGGCGGGATTCGTCAATCGAATTTCTCCACTCCGCCGAACGCCGTGATTTCTCCGCCCTCTGGTTACCTATTACAACAACCGCCACAGTTCTACAATCACAATCCCCAGCAGTTCGTGTTTCCGACAGCCGCACACGGCGGCGACTTTCTTCAGAGGCTATCAGCGCCGAGGCCGGCTAATGGCGGAGTTTCTGGAGACGGATTTCTGATGGAAAGTGTGGTTTCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACGAGAGCAATGGCGGTAATGGCCGCTTACTGTTCTGA

mRNA sequence

ATGTCCGGCCCTGGCGATTGGCTTCAATTTTACCATCAAAATCTTTCTTCCACGGCGGCGCCACCACCACCTTCCGATCAATCCAACCCCGAAATGATTTTCGTCGATCGAGTTTCTGACACCACCGCCTCCGGAAACACAGGCGGTTCGACTGGATTGAATCCGGAAGGTCGCGTAGGAAAGCCGGTTCGCCGCCGGTCCAGGGCATCTCGGCGGACTCCGACGACGTTGCTCAACACGGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACTGGCGGTCCAACTCCACCTTTCGCCTCATCGATTTCCCCCAATTTTTCTCTAGGGTTCGGCGGGATTCGTCAATCGAATTTCTCCACTCCGCCGAACGCCGTGATTTCTCCGCCCTCTGGTTACCTATTACAACAACCGCCACAGTTCTACAATCACAATCCCCAGCAGTTCGTGTTTCCGACAGCCGCACACGGCGGCGACTTTCTTCAGAGGCTATCAGCGCCGAGGCCGGCTAATGGCGGAGTTTCTGGAGACGGATTTCTGATGGAAAGTGTGGTTTCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACGAGAGCAATGGCGGTAATGGCCGCTTACTGTTCTGA

Coding sequence (CDS)

ATGTCCGGCCCTGGCGATTGGCTTCAATTTTACCATCAAAATCTTTCTTCCACGGCGGCGCCACCACCACCTTCCGATCAATCCAACCCCGAAATGATTTTCGTCGATCGAGTTTCTGACACCACCGCCTCCGGAAACACAGGCGGTTCGACTGGATTGAATCCGGAAGGTCGCGTAGGAAAGCCGGTTCGCCGCCGGTCCAGGGCATCTCGGCGGACTCCGACGACGTTGCTCAACACGGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACTGGCGGTCCAACTCCACCTTTCGCCTCATCGATTTCCCCCAATTTTTCTCTAGGGTTCGGCGGGATTCGTCAATCGAATTTCTCCACTCCGCCGAACGCCGTGATTTCTCCGCCCTCTGGTTACCTATTACAACAACCGCCACAGTTCTACAATCACAATCCCCAGCAGTTCGTGTTTCCGACAGCCGCACACGGCGGCGACTTTCTTCAGAGGCTATCAGCGCCGAGGCCGGCTAATGGCGGAGTTTCTGGAGACGGATTTCTGATGGAAAGTGTGGTTTCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACGAGAGCAATGGCGGTAATGGCCGCTTACTGTTCTGA

Protein sequence

MSGPGDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTASGNTGGSTGLNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGGIRQSNFSTPPNAVISPPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGGVSGDGFLMESVVSSQIPPAGASADSSNESNGGNGRLLF

Homology

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BLAST of Lsi07G007880 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-16
Identity = 79/212 (37.26%), Postives = 101/212 (47.64%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTASGNTGGSTGLNPE-GRV 60
           M+ P +W QFY+ N +        S            V+ TTA   T   + L+PE GRV
Sbjct: 1   MANPNEWSQFYNNNQTFFTTSTTAS----------TAVTTTTAGDTTSIDSRLSPETGRV 60

Query: 61  GKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFG-GIRQS 120
            KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP+           ++ FG G   S
Sbjct: 61  TKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPS-----------AMAFGSGNTTS 120

Query: 121 NFSTPPNAVISPPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANG--GVS 180
            FS   +   S PS    QQ P  YN  P     P       ++  L+   P  G   ++
Sbjct: 121 AFSLTSS---SDPSAGSSQQAPWQYNFQPHA---PLQPPQRPYMFSLNNVNPVVGYSNMN 180

Query: 181 GDGFLMESVVSS-QIPPAGASADSSNESNGGN 208
               ++  V  +      G SA SS E+   N
Sbjct: 181 NPNTMVSGVFGTVDGSGGGGSAPSSKEATNSN 185

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BLAST of Lsi07G007880 vs. ExPASy TrEMBL
Match: A0A5A7TQ26 (VQ motif-containing protein 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G003080 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.5e-99
Identity = 190/209 (90.91%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 5   GDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTASGNTGGSTGLNPEGRVGKPVR 64
           GDWLQFYHQNLSST APPPPS  S  EMIF DRVSD TAS NT GSTGLNPEGRVGKPVR
Sbjct: 3   GDWLQFYHQNLSST-APPPPSHHSTSEMIFADRVSDATASANTLGSTGLNPEGRVGKPVR 62

Query: 65  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGGIRQSNFSTPP 124
           RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFGGIRQSNFST  
Sbjct: 63  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIRQSNFSTSQ 122

Query: 125 NAVIS-PPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGGVSGDGFLME 184
           NA IS PPSGYLLQQPPQ YNHNPQ FVFPTAAHGGDFLQRLSAPRPANGGV+GDGFL+E
Sbjct: 123 NAAISPPPSGYLLQQPPQLYNHNPQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLIE 182

Query: 185 SVVSSQIPPAGASADSSNESNGGNGRLLF 213
           S VSSQIPPAGASADSSNESNGGNGRLLF
Sbjct: 183 SAVSSQIPPAGASADSSNESNGGNGRLLF 210

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BLAST of Lsi07G007880 vs. ExPASy TrEMBL
Match: A0A5D3CX65 (VQ motif-containing protein 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002760 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 189/209 (90.43%), Postives = 191/209 (91.39%), Query Frame = 0


Query: 5   GDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTASGNTGGSTGLNPEGRVGKPVR 64
           GDWLQFYHQNLSST APPPPS  S  EMIF DRVSD TAS NT GSTGLNPEGRVGKPVR
Sbjct: 3   GDWLQFYHQNLSST-APPPPSHHSTSEMIFADRVSDATASANTLGSTGLNPEGRVGKPVR 62

Query: 65  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGGIRQSNFSTPP 124
           RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFGGIRQSNFST  
Sbjct: 63  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIRQSNFSTSQ 122

Query: 125 NAVIS-PPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGGVSGDGFLME 184
           NA IS PPSGYLLQQPPQ YNHNPQ FVFPT AHGGDFLQRLSAPRPANGGV+GDGFL+E
Sbjct: 123 NAAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGGVAGDGFLIE 182

Query: 185 SVVSSQIPPAGASADSSNESNGGNGRLLF 213
           S VSSQIPPAGASADSSNESNGGNGRLLF
Sbjct: 183 SAVSSQIPPAGASADSSNESNGGNGRLLF 210

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BLAST of Lsi07G007880 vs. ExPASy TrEMBL
Match: A0A1S3BTN7 (VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103493042 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 189/209 (90.43%), Postives = 191/209 (91.39%), Query Frame = 0


Query: 5   GDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTASGNTGGSTGLNPEGRVGKPVR 64
           GDWLQFYHQNLSST APPPPS  S  EMIF DRVSD TAS NT GSTGLNPEGRVGKPVR
Sbjct: 3   GDWLQFYHQNLSST-APPPPSHHSTSEMIFADRVSDATASANTLGSTGLNPEGRVGKPVR 62

Query: 65  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGGIRQSNFSTPP 124
           RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFGGIRQSNFST  
Sbjct: 63  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIRQSNFSTSQ 122

Query: 125 NAVIS-PPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGGVSGDGFLME 184
           NA IS PPSGYLLQQPPQ YNHNPQ FVFPT AHGGDFLQRLSAPRPANGGV+GDGFL+E
Sbjct: 123 NAAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGGVAGDGFLIE 182

Query: 185 SVVSSQIPPAGASADSSNESNGGNGRLLF 213
           S VSSQIPPAGASADSSNESNGGNGRLLF
Sbjct: 183 SAVSSQIPPAGASADSSNESNGGNGRLLF 210

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BLAST of Lsi07G007880 vs. ExPASy TrEMBL
Match: A0A6J1J759 (VQ motif-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111483172 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.0e-83
Identity = 167/208 (80.29%), Postives = 177/208 (85.10%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTASGNTGGSTGLNPEGRVG 60
           MSGPGDWLQFYHQNL +TAA PPPSDQS  EMIFVDRVSD  AS NTG STGLNPE RV 
Sbjct: 1   MSGPGDWLQFYHQNLPTTAA-PPPSDQSTSEMIFVDRVSDAIASANTGASTGLNPERRVA 60

Query: 61  KPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGGIRQSNF 120
           KPVRRRSR SRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFG I QSN 
Sbjct: 61  KPVRRRSRTSRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSN- 120

Query: 121 STPPNAVISPPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGGVSGDGF 180
               + +ISPPSGY    P QFY+HNPQ FV P +AHGG+FLQRLSA +P NGGV+ DGF
Sbjct: 121 ----SGLISPPSGY----PLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGVAADGF 180

Query: 181 LMESVVSSQIPPAGASADSSNESNGGNG 209
           LMES VSSQIPPAGASADSSN+SNGG+G
Sbjct: 181 LMESAVSSQIPPAGASADSSNKSNGGSG 198

[Close]

BLAST of Lsi07G007880 vs. ExPASy TrEMBL
Match: A0A6J1FXJ7 (VQ motif-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111448012 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.3e-82
Identity = 166/221 (75.11%), Postives = 180/221 (81.45%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLSSTAAPPPPSD-QSNPEMIFVDRVSDTTA--------SGNTGGST 60
           MS PGDWLQFYHQNLS+TAAP PPSD  ++  MIF +RVSD TA         G++ G+ 
Sbjct: 1   MSSPGDWLQFYHQNLSTTAAPQPPSDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNP 60

Query: 61  GLNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLG 120
           GLNPEGRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT  FASSISPNF LG
Sbjct: 61  GLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLG 120

Query: 121 FGGIRQSNFSTPPNAVISPPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPA 180
           F GI QSNF TPPNAVISPPS YL  QPPQFY+ NPQ F+FP AAHGGDF QR+S  RPA
Sbjct: 121 FRGICQSNFGTPPNAVISPPSDYL--QPPQFYHSNPQPFMFPAAAHGGDFTQRISVARPA 180

Query: 181 NGGVSGDGFLMESVVSSQIPPAGASADSSNESNGGNGRLLF 213
           N GV+GDGFLMES VSSQIP  GASADSSN++N GNG  LF
Sbjct: 181 NDGVAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF 219

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BLAST of Lsi07G007880 vs. NCBI nr
Match: XP_038900813.1 (VQ motif-containing protein 22 [Benincasa hispida])

HSP 1 Score: 382.1 bits (980), Expect = 3.1e-102
Identity = 197/218 (90.37%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSD------TTASGNTGGSTGLN 60
           MSG GDWLQFYHQNLSSTAA PPPSDQS  EMIF DRVSD      TTASG T GSTGLN
Sbjct: 1   MSGHGDWLQFYHQNLSSTAA-PPPSDQSTSEMIFADRVSDATAVVTTTASGTTAGSTGLN 60

Query: 61  PEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGG 120
           PEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGF G
Sbjct: 61  PEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFSG 120

Query: 121 IRQSNFSTPPNAVISPPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGG 180
           IRQSNFSTPPNAVISPPSGYLLQQPPQFYNHNPQ F+FPT AHGGDFLQRLSAPRPANGG
Sbjct: 121 IRQSNFSTPPNAVISPPSGYLLQQPPQFYNHNPQPFLFPTDAHGGDFLQRLSAPRPANGG 180

Query: 181 VSGDGFLMESVVSSQIPPAGASADSSNESNGGNGRLLF 213
           VSGDGFL ES V SQIPPAGASA SSNESNGGNGRLLF
Sbjct: 181 VSGDGFLTESAVPSQIPPAGASAGSSNESNGGNGRLLF 217

[Close]

BLAST of Lsi07G007880 vs. NCBI nr
Match: KAA0044998.1 (VQ motif-containing protein 22-like [Cucumis melo var. makuwa])

HSP 1 Score: 370.5 bits (950), Expect = 9.4e-99
Identity = 190/209 (90.91%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 5   GDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTASGNTGGSTGLNPEGRVGKPVR 64
           GDWLQFYHQNLSST APPPPS  S  EMIF DRVSD TAS NT GSTGLNPEGRVGKPVR
Sbjct: 3   GDWLQFYHQNLSST-APPPPSHHSTSEMIFADRVSDATASANTLGSTGLNPEGRVGKPVR 62

Query: 65  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGGIRQSNFSTPP 124
           RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFGGIRQSNFST  
Sbjct: 63  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIRQSNFSTSQ 122

Query: 125 NAVIS-PPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGGVSGDGFLME 184
           NA IS PPSGYLLQQPPQ YNHNPQ FVFPTAAHGGDFLQRLSAPRPANGGV+GDGFL+E
Sbjct: 123 NAAISPPPSGYLLQQPPQLYNHNPQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLIE 182

Query: 185 SVVSSQIPPAGASADSSNESNGGNGRLLF 213
           S VSSQIPPAGASADSSNESNGGNGRLLF
Sbjct: 183 SAVSSQIPPAGASADSSNESNGGNGRLLF 210

[Close]

BLAST of Lsi07G007880 vs. NCBI nr
Match: XP_008451884.1 (PREDICTED: VQ motif-containing protein 22-like [Cucumis melo] >TYK16473.1 VQ motif-containing protein 22-like [Cucumis melo var. makuwa])

HSP 1 Score: 369.0 bits (946), Expect = 2.7e-98
Identity = 189/209 (90.43%), Postives = 191/209 (91.39%), Query Frame = 0


Query: 5   GDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTASGNTGGSTGLNPEGRVGKPVR 64
           GDWLQFYHQNLSST APPPPS  S  EMIF DRVSD TAS NT GSTGLNPEGRVGKPVR
Sbjct: 3   GDWLQFYHQNLSST-APPPPSHHSTSEMIFADRVSDATASANTLGSTGLNPEGRVGKPVR 62

Query: 65  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGGIRQSNFSTPP 124
           RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFGGIRQSNFST  
Sbjct: 63  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIRQSNFSTSQ 122

Query: 125 NAVIS-PPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGGVSGDGFLME 184
           NA IS PPSGYLLQQPPQ YNHNPQ FVFPT AHGGDFLQRLSAPRPANGGV+GDGFL+E
Sbjct: 123 NAAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGGVAGDGFLIE 182

Query: 185 SVVSSQIPPAGASADSSNESNGGNGRLLF 213
           S VSSQIPPAGASADSSNESNGGNGRLLF
Sbjct: 183 SAVSSQIPPAGASADSSNESNGGNGRLLF 210

[Close]

BLAST of Lsi07G007880 vs. NCBI nr
Match: XP_011653250.1 (VQ motif-containing protein 22 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.3e-95
Identity = 188/215 (87.44%), Postives = 191/215 (88.84%), Query Frame = 0


Query: 5   GDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSD------TTASGNTGGSTGLNPEGR 64
           GDWLQFYHQNLSSTAA PPPSD S  EM FVDRVSD      TTAS NT GSTGLNPEGR
Sbjct: 3   GDWLQFYHQNLSSTAA-PPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEGR 62

Query: 65  VGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGGIRQS 124
           VGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFGGI QS
Sbjct: 63  VGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQS 122

Query: 125 NFSTPPNAVIS-PPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGGVSG 184
           NF T  NA IS PPSGYLLQQPPQ YNHNPQQF+FPT AHGGDFLQRLSAPRPANG V+G
Sbjct: 123 NFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVAG 182

Query: 185 DGFLMESVVSSQIPPAGASADSSNESNGGNGRLLF 213
           DGFL+ES VSSQIPPAGASADSSNESNGGNGRLLF
Sbjct: 183 DGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 216

[Close]

BLAST of Lsi07G007880 vs. NCBI nr
Match: KAE8649229.1 (hypothetical protein Csa_014840 [Cucumis sativus])

HSP 1 Score: 345.5 bits (885), Expect = 3.2e-91
Identity = 181/208 (87.02%), Postives = 184/208 (88.46%), Query Frame = 0


Query: 5   GDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSD------TTASGNTGGSTGLNPEGR 64
           GDWLQFYHQNLSSTAA PPPSD S  EM FVDRVSD      TTAS NT GSTGLNPEGR
Sbjct: 3   GDWLQFYHQNLSSTAA-PPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEGR 62

Query: 65  VGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGGIRQS 124
           VGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFGGI QS
Sbjct: 63  VGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQS 122

Query: 125 NFSTPPNAVIS-PPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGGVSG 184
           NF T  NA IS PPSGYLLQQPPQ YNHNPQQF+FPT AHGGDFLQRLSAPRPANG V+G
Sbjct: 123 NFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVAG 182

Query: 185 DGFLMESVVSSQIPPAGASADSSNESNG 206
           DGFL+ES VSSQIPPAGASADSSNESNG
Sbjct: 183 DGFLIESAVSSQIPPAGASADSSNESNG 209

[Close]

BLAST of Lsi07G007880 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein )

HSP 1 Score: 88.2 bits (217), Expect = 8.7e-18
Identity = 79/212 (37.26%), Postives = 101/212 (47.64%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTASGNTGGSTGLNPE-GRV 60
           M+ P +W QFY+ N +        S            V+ TTA   T   + L+PE GRV
Sbjct: 1   MANPNEWSQFYNNNQTFFTTSTTAS----------TAVTTTTAGDTTSIDSRLSPETGRV 60

Query: 61  GKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFG-GIRQS 120
            KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP+           ++ FG G   S
Sbjct: 61  TKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPS-----------AMAFGSGNTTS 120

Query: 121 NFSTPPNAVISPPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANG--GVS 180
            FS   +   S PS    QQ P  YN  P     P       ++  L+   P  G   ++
Sbjct: 121 AFSLTSS---SDPSAGSSQQAPWQYNFQPHA---PLQPPQRPYMFSLNNVNPVVGYSNMN 180

Query: 181 GDGFLMESVVSS-QIPPAGASADSSNESNGGN 208
               ++  V  +      G SA SS E+   N
Sbjct: 181 NPNTMVSGVFGTVDGSGGGGSAPSSKEATNSN 185

[Close]

BLAST of Lsi07G007880 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16
Identity = 78/205 (38.05%), Postives = 91/205 (44.39%), Query Frame = 0


Query: 6   DWLQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTASGNTGGSTGLNPEG-RVGKPVR 65
           DW QFY+     T A    +               TT +  T   + L+P+  RV KP R
Sbjct: 7   DWSQFYNNQTFFTTATSTVT---------------TTTTTATSADSPLSPDNRRVAKPTR 66

Query: 66  RRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTP-PFASSISPNFSLGFGGIRQSNFSTP 125
           RRSRASRRTPTTL NTDT NFRAMVQQFTGGP+   F SS S  FSL          S P
Sbjct: 67  RRSRASRRTPTTLFNTDTANFRAMVQQFTGGPSAVAFGSSPSSGFSL--------TSSDP 126

Query: 126 PNAVISPPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRLSAPRPANGGVSGDGFLME 185
              V S P  Y   Q    +N   QQ   P      + +  LS P      V+ DGF+  
Sbjct: 127 TAGVSSSPWQYANLQNQMAHNELMQQ-QRPYMFSSSNNVSTLSYP----NAVATDGFV-- 169

Query: 186 SVVSSQIPPAGASADSSNESNGGNG 209
                        A+ S E  GG G
Sbjct: 187 ------------GAEESREGGGGGG 169

[Close]

BLAST of Lsi07G007880 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein )

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-12
Identity = 69/217 (31.80%), Postives = 98/217 (45.16%), Query Frame = 0


Query: 8   LQFYHQNLSSTAAPPPPSDQSNPEMIFVDRVSDTTAS---GNTGGSTGLNPEGRVG--KP 67
           L F H N +S     PP+  +N   + V++  D  +      +  ++ L P   +G  K 
Sbjct: 57  LHFDHNNNNSLI---PPNYFNNNTFLPVNQQPDPISQLDLRTSSATSSLPPTNNIGVIKK 116

Query: 68  VRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSIS------PNFSLGFGGIR 127
            ++RSRASRR PTT+L TDT+NFRAMVQ+FTG P PP  ++ S       N  LG     
Sbjct: 117 TKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPLFNNNSIVNTTRLNTFLGLSSSS 176

Query: 128 QSNFSTPPNAVISPPSGYLLQQPPQFYNHNPQQFVFPTAAHGGDFLQRL-----SAPRPA 187
            + ++T  N ++ P +  L    P       QQ+  P        LQ L     S PR  
Sbjct: 177 PNTYNT-NNLLLRPFAQKLTPATPLLSGSQIQQYQNPNNGFEDMNLQALLQAHISNPRSN 236

Query: 188 NGGVSGDGFLMESVVSSQIPPAGASADSSNESNGGNG 209
                G G +      S  PP   +A + N + G NG
Sbjct: 237 EHDQFGLGMMQ---TPSTNPPTTTAAANGNINTGDNG 266

[Close]

BLAST of Lsi07G007880 vs. TAIR 10
Match: AT5G65170.1 (VQ motif-containing protein )

HSP 1 Score: 62.0 bits (149), Expect = 6.6e-10
Identity = 53/154 (34.42%), Postives = 75/154 (48.70%), Query Frame = 0


Query: 17  STAAPPPPSDQ----SNPEMIFVDRVSDTTASG---------NTGGSTGLNPEGRVGKPV 76
           S   PPP S +    +NP    +  V +T  +            G +T  NP        
Sbjct: 88  SRPVPPPISSEQVFFTNPLQQNLRTVPNTNTTSPICSVPTDKKNGLATTRNP-------- 147

Query: 77  RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFA--SSISPNFSLGFGGIRQSNFS 136
           ++RSR SRR PTT+L TDT+NFRAMVQ+FTG P+ PF   SS  P       G   S+ S
Sbjct: 148 KKRSRVSRRAPTTVLTTDTSNFRAMVQEFTGNPSTPFTGLSSSFPRSRFDLFGSSSSSSS 207

Query: 137 TP----PNAVISPP--SGYLLQQPPQFYNHNPQQ 150
            P    P+ +ISP   + + L    ++++H+  Q
Sbjct: 208 RPMKPFPHKLISPSTLNHHYLPPSSEYHHHHQHQ 233

[Close]

BLAST of Lsi07G007880 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein )

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-09
Identity = 37/96 (38.54%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 64  RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPN------FSLGFGGIRQ 123
           R+R+RASRR PTT+L TDT+NFRAMVQ+FTG P  PF+   S        F      +  
Sbjct: 100 RKRTRASRRAPTTVLTTDTSNFRAMVQEFTGVPASPFSHPFSSTTRRFDIFRSPSDPLTY 159

Query: 124 SNFSTPPNAVISPPSGYLLQQPPQFYNHNPQQFVFP 154
           + F   P   ++P +  LL      ++H      FP
Sbjct: 160 NPFRPIPQKPLNPSTSSLL----NLHHHTTTSMTFP 191

The following BLAST results are available for this feature:

BLAST of Lsi07G007880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIE6	1.2e-16	37.26	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1	[more]

BLAST of Lsi07G007880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQ26	4.5e-99	90.91	VQ motif-containing protein 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3CX65	1.3e-98	90.43	VQ motif-containing protein 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BTN7	1.3e-98	90.43	VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103493042 PE=4...	[more]
A0A6J1J759	2.0e-83	80.29	VQ motif-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111483172 ...	[more]
A0A6J1FXJ7	2.3e-82	75.11	VQ motif-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC11144801...	[more]

BLAST of Lsi07G007880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900813.1	3.1e-102	90.37	VQ motif-containing protein 22 [Benincasa hispida]	[more]
KAA0044998.1	9.4e-99	90.91	VQ motif-containing protein 22-like [Cucumis melo var. makuwa]	[more]
XP_008451884.1	2.7e-98	90.43	PREDICTED: VQ motif-containing protein 22-like [Cucumis melo] >TYK16473.1 VQ mot...	[more]
XP_011653250.1	1.3e-95	87.44	VQ motif-containing protein 22 [Cucumis sativus]	[more]
KAE8649229.1	3.2e-91	87.02	hypothetical protein Csa_014840 [Cucumis sativus]	[more]

BLAST of Lsi07G007880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22160.1	8.7e-18	37.26	VQ motif-containing protein	[more]
AT4G15120.1	1.3e-16	38.05	VQ motif-containing protein	[more]
AT4G39720.1	5.4e-12	31.80	VQ motif-containing protein	[more]
AT5G65170.1	6.6e-10	34.42	VQ motif-containing protein	[more]
AT1G35830.1	3.3e-09	38.54	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 72..99 e-value: 2.4E-10 score: 39.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..74
None	No IPR available	PANTHER	PTHR33179:SF29	VQ MOTIF-CONTAINING PROTEIN	coord: 1..199
IPR039609	VQ motif-containing protein 15/22	PANTHER	PTHR33179	VQ MOTIF-CONTAINING PROTEIN	coord: 1..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G007880.1	Lsi07G007880.1	mRNA