Lsi06G006460 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G006460
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCholine monooxygenase, chloroplastic
Locationchr06: 9586275 .. 9589755 (+)
RNA-Seq ExpressionLsi06G006460
SyntenyLsi06G006460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCGAAATTATGATTAAAAATATTAGTTATAATCTTACTCGATATTTCCATCGTGGATATTTCGAACTAGTGCTGTATTGCTGATTGTTGTTTCAAAGAGAAGCAAGCTTGAGGATTGCTGCAATGGCGACGTTAACGAAGCATATCCATACTCACTTCTTCCAACCTCCTTCAACTACCTTCAATTTGCATTCGTGCAATAATCGTTCTCCCAAACGAATCTCGGCGGCTTTATCCTTTCGAAACTCTGATTCTCACTTCATTGAAGCTCAGAAACTCGTTGATGAATTCGACCCTGAAATTCCCTTGGAGAAGGCCGTCACTCCACCCAGCTCCTGGTATATTGACCCTTCATTTTTTGCTCTCGAGCTCGATCGTGTCTTCTACAGAGGATGGCAGGCTGTAGGTTCGCTTCGATTTCTAAATTGTTGATGTTCTTCTTTTGCGACTCTATTTAATTGTAGCTGCATAGCGAGGAGATTAATTGCTAGATTTCAATGTGACTGCAATTTTTTACCTATGATTATAATGGAGATTGCTTAACTGGGGTTGGACATTGGGGTTCCCCAATTCTAAATCTCTTCCAGTCAAGCCATTTTCCTGGGTTTTAACCTTTCACAAACCATCTATATCACGATAGAAAGAGAATAGCTTCCTTCAGAACTTAAAAAATGGAAGACCAAGATTAGGAGAAGAAGAAAAATTGCCTATGATCATTGGTATCTGCCTTCTATTAACTGAGAACTCAGAAGTTCTTGGTGTTTGACAGAGTACAAAGCAGGCTAATCCCATTGAAATTGGGTACTCTTCTTTGTTTTTCAGCTAATGCAATCTGCTCCTTGTTTTTCCTCTTTAGATTATGACTCTAACAATATTAAGGCATGGATCATCAACTTTTTGTGCCTTTGGCTTGTCAGGATATGTTGAACAGTTAAAAGATCCCCATGACTTTTTCACAGGCAGGTGTGATTAATTGTCACTTACCATTTATTACTGATAGTATAAAATCTAGAGAGCAGTAATAAAATTATTTCTATTACCTGAATGTTGGATATATTTCTCACAGGGTAATTTAACCAAATATGGAGTTGAATCACTTGACATTTTTAATGCCTTGAGTCTTAGATATGGGATGCCAGAGATGTGTGTTCTTCCCCACCATGGATTGTCCTTGAAATTTGTTTGTTCTTTGTCTCTTTGACCATGGCAGGTTGGGAAATATAGAGTACGTGGTATGCAAAGATAATAACAGGAAGGTTCGTGCATTTCACAATGTTTGTCGCCATCATGCCTCACTTCTTGCGTCTGGATGTGGGAAGAAGTCATGCTTTGTATGTCCATATCATGTGAGTTCACTTGCATATCTTCTTGTAGGTTCCTTGGGAATTTCTTGGTTTTCTATTTTTTAGTTATTTCTTGACGCGATTAAGGTTTTAGTCCACAACTTTAACTTCATCTTGAAAGGAACGGTAATTTCCATTAAAGGAAAAAGTGATCATTGTTAAAGGTGAAAAATGGAAATCTCCAAGCTATTCTCTGATCTTATGAAAAATATTTAAAATGTAATTAGAATGTAAGATTCTGAGATATTACGAGTGCATCTATATGTATTGAACAGCCTTGTTCCATACTTTGTGCAGGGATGGACATATGGGTTGGATGGAGTACTGGTTAAGGCGACTAGAATAAATGGGATACAGAACTTTGATGTAAATGTATGTAACTATATCATTGTGCTACCAGTTTTCATAACCATTTCAATGTAACATTTCTGAATGGCTTAGTAATTAGTTAATTTATTTAATGATGGAGATTAGGATTTTGGGCTCATACCATTACCAGTAGCTACATGGGGGCCTTTTGTTCTTCTCAATCTAGATGGAAAATTATCATCTGAGCTGGATGTCGATGAAGATAAAGTAGCACATCAATGGCTTGGAAGCTGTGCAGATGTGCTGAGTTTAAATGGAGTTGATACTTCTTTAAGTTATGTTTGTCGACGTGAATACACCATTGAATGTAATTGGAAGGTGTCGTTCTTGCATCCTTCTAGAAAAATGGTCATATACTGTTACCATAATCCTGATGGGTTTTGGTATATGTTTTATTGGTTTTTTGTAGGTTTTTTGTGACAACTACTTAGATGGAGGATATCACGTCCCCTATGCACATAAAGGGCTTGCATCAAATCTCAAGCTTGAGTCTTATTCTAGAGAAGTACGTTGACTGTTTATTTTAAATTTATTACCAAACTACTGTTATAGCACTATGCTATCATACAATTTTGTGTTCTAGGATTTGTTTAGTATTTAAGCAATTATTCTGTTTTCACCTACGGTCCATTGGACCTTCATATGAAATAAAAATGCATATTTACAGTAGTCGATCATTCTTTGTTAATTATCAATATTATGCGACTATAACTTGTGATGTAGATATTTGAAACTGTTAGCATTCAAAGTTGTAATGGTGGGGGAGAATCAAAACGTGATGATTATGGTCGACTTGGACCAGAAGCACTATATGCTTTTATATACCCAAATTTCATGATAAATAGGTAGTTCCTGGCTATGTCAACGTAGCTCTTTGGCTCCTTATGTTTCAAAATGTTTTTCCATGATGTTCGTCTCATCAGTTGTTGGGTTATGTAATAGGTATGGACCTTGGATGGACACTAATCTAGTACTTCCACTTGGACCTCGAAAATGTCTAGTGGTTTTCGATTATTTTCTTGAAGCTTCTTTTAAGGTAATTTCGAGTCTTTTTGGCCTCATGGATATGCAATAAGTCCTTTTTGTGTGTGCTCAAGTTCTCACTCGTGTTCTTGATATTAAAAAGACTGCTTGGGTAACACAAAAACTCAGCAATAACTGAGCTTTTGGGTATTAAAGTTTTCAGTTCATTCGAAGTTTTACCTTTTCTCTTCATTGATTTCACTTTCAGAATGACGACTCTTATATACAACAAAGTTTAGCAGACAGTGAAAGTGTGCAGGTATTACAAACAAATCCACTCCAGTTTCATTGTGCAGTGTTAATTCAACTGTTCTTTTTTCCTTACACATTGGTCCAAATAATTTTCAGAATGAAGACATTATTCTGTATGAAGGTGTTCAAAAGGGTCTCGAGTCACAGGCTTACACGTTTGGTCGATATGCTCCTTCGGTCGAGAATGCCATGCACCATTTCCATCGTCTTCTTCATTTTAACCTCACAAATGAAAAATAGTTAAAAGAAGTTTGTTTCTTATAAAAAAGTTTGGATAGAAGTGAACTTTAGTATTTTGGTACAAGACATCGAAAGATGTTTCTTTTAGGTTTTAGGTTTTGGTAGTTTATCCTAGAAATGATTCGTAATAAGTTGCCATTGCTGAAATGTCTTAAGTTGTAAAAGTTTCTAATTGTTATGTTTTTGTTGTGGATGGGCAAAAAAGTACCAAAAGAACATACCTATTACCAATCCTCCTCAAGGAGGGGAAACAC

mRNA sequence

CTCGAAATTATGATTAAAAATATTAGTTATAATCTTACTCGATATTTCCATCGTGGATATTTCGAACTAGTGCTGTATTGCTGATTGTTGTTTCAAAGAGAAGCAAGCTTGAGGATTGCTGCAATGGCGACGTTAACGAAGCATATCCATACTCACTTCTTCCAACCTCCTTCAACTACCTTCAATTTGCATTCGTGCAATAATCGTTCTCCCAAACGAATCTCGGCGGCTTTATCCTTTCGAAACTCTGATTCTCACTTCATTGAAGCTCAGAAACTCGTTGATGAATTCGACCCTGAAATTCCCTTGGAGAAGGCCGTCACTCCACCCAGCTCCTGGTATATTGACCCTTCATTTTTTGCTCTCGAGCTCGATCGTGTCTTCTACAGAGGATGGCAGGCTGTAGGATATGTTGAACAGTTAAAAGATCCCCATGACTTTTTCACAGGCAGGTTGGGAAATATAGAGTACGTGGTATGCAAAGATAATAACAGGAAGGTTCGTGCATTTCACAATGTTTGTCGCCATCATGCCTCACTTCTTGCGTCTGGATGTGGGAAGAAGTCATGCTTTGTATGTCCATATCATGGATGGACATATGGGTTGGATGGAGTACTGGTTAAGGCGACTAGAATAAATGGGATACAGAACTTTGATGTAAATGATTTTGGGCTCATACCATTACCAGTAGCTACATGGGGGCCTTTTGTTCTTCTCAATCTAGATGGAAAATTATCATCTGAGCTGGATGTCGATGAAGATAAAGTAGCACATCAATGGCTTGGAAGCTGTGCAGATGTGCTGAGTTTAAATGGAGTTGATACTTCTTTAAGTTATGTTTGTCGACGTGAATACACCATTGAATGTAATTGGAAGGTTTTTTGTGACAACTACTTAGATGGAGGATATCACGTCCCCTATGCACATAAAGGGCTTGCATCAAATCTCAAGCTTGAGTCTTATTCTAGAGAAATATTTGAAACTGTTAGCATTCAAAGTTGTAATGGTGGGGGAGAATCAAAACGTGATGATTATGGTCGACTTGGACCAGAAGCACTATATGCTTTTATATACCCAAATTTCATGATAAATAGGTATGGACCTTGGATGGACACTAATCTAGTACTTCCACTTGGACCTCGAAAATTTCTCACTCGTGTTCTTGATATTAAAAAGACTGCTTGGAATGACGACTCTTATATACAACAAAGTTTAGCAGACAGTGAAAGTGTGCAGAATGAAGACATTATTCTGTATGAAGGTGTTCAAAAGGGTCTCGAGTCACAGGCTTACACGTTTGGTCGATATGCTCCTTCGGTCGAGAATGCCATGCACCATTTCCATCGTCTTCTTCATTTTAACCTCACAAATGAAAAATAGTTAAAAGAAGTTTGTTTCTTATAAAAAAGTTTGGATAGAAGTGAACTTTAGTATTTTGGTACAAGACATCGAAAGATGTTTCTTTTAGGTTTTAGGTTTTGGTAGTTTATCCTAGAAATGATTCGTAATAAGTTGCCATTGCTGAAATGTCTTAAGTTGTAAAAGTTTCTAATTGTTATGTTTTTGTTGTGGATGGGCAAAAAAGTACCAAAAGAACATACCTATTACCAATCCTCCTCAAGGAGGGGAAACAC

Coding sequence (CDS)

ATGGCGACGTTAACGAAGCATATCCATACTCACTTCTTCCAACCTCCTTCAACTACCTTCAATTTGCATTCGTGCAATAATCGTTCTCCCAAACGAATCTCGGCGGCTTTATCCTTTCGAAACTCTGATTCTCACTTCATTGAAGCTCAGAAACTCGTTGATGAATTCGACCCTGAAATTCCCTTGGAGAAGGCCGTCACTCCACCCAGCTCCTGGTATATTGACCCTTCATTTTTTGCTCTCGAGCTCGATCGTGTCTTCTACAGAGGATGGCAGGCTGTAGGATATGTTGAACAGTTAAAAGATCCCCATGACTTTTTCACAGGCAGGTTGGGAAATATAGAGTACGTGGTATGCAAAGATAATAACAGGAAGGTTCGTGCATTTCACAATGTTTGTCGCCATCATGCCTCACTTCTTGCGTCTGGATGTGGGAAGAAGTCATGCTTTGTATGTCCATATCATGGATGGACATATGGGTTGGATGGAGTACTGGTTAAGGCGACTAGAATAAATGGGATACAGAACTTTGATGTAAATGATTTTGGGCTCATACCATTACCAGTAGCTACATGGGGGCCTTTTGTTCTTCTCAATCTAGATGGAAAATTATCATCTGAGCTGGATGTCGATGAAGATAAAGTAGCACATCAATGGCTTGGAAGCTGTGCAGATGTGCTGAGTTTAAATGGAGTTGATACTTCTTTAAGTTATGTTTGTCGACGTGAATACACCATTGAATGTAATTGGAAGGTTTTTTGTGACAACTACTTAGATGGAGGATATCACGTCCCCTATGCACATAAAGGGCTTGCATCAAATCTCAAGCTTGAGTCTTATTCTAGAGAAATATTTGAAACTGTTAGCATTCAAAGTTGTAATGGTGGGGGAGAATCAAAACGTGATGATTATGGTCGACTTGGACCAGAAGCACTATATGCTTTTATATACCCAAATTTCATGATAAATAGGTATGGACCTTGGATGGACACTAATCTAGTACTTCCACTTGGACCTCGAAAATTTCTCACTCGTGTTCTTGATATTAAAAAGACTGCTTGGAATGACGACTCTTATATACAACAAAGTTTAGCAGACAGTGAAAGTGTGCAGAATGAAGACATTATTCTGTATGAAGGTGTTCAAAAGGGTCTCGAGTCACAGGCTTACACGTTTGGTCGATATGCTCCTTCGGTCGAGAATGCCATGCACCATTTCCATCGTCTTCTTCATTTTAACCTCACAAATGAAAAATAG

Protein sequence

MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEIPLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCKDNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVNDFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESKRDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLDIKKTAWNDDSYIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLTNEK
Homology
[Close]
BLAST of Lsi06G006460 vs. ExPASy Swiss-Prot
Match: Q9SZR0 (Choline monooxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29890 PE=2 SV=2)

HSP 1 Score: 513.5 bits (1321), Expect = 2.3e-144
Identity = 258/424 (60.85%), Postives = 308/424 (72.64%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTT-----FNLHSCNNRSPKRISAALSFRNSDSHFI--EAQKLV 60
           M TLT  +    F PPS       FN HS    S  + S    F N    F   +  KLV
Sbjct: 2   MTTLTATVPE--FLPPSLKSTRGYFNSHSEFGVSISKFSRR-RFHNPTRVFAVSDISKLV 61

Query: 61  DEFDPEIPLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGN 120
            EFDP+IPLE+A TPPSSWY DP F++ ELDRVFY GWQAVGY +Q+K+  DFFTGRLG+
Sbjct: 62  TEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAVGYSDQIKESRDFFTGRLGD 121

Query: 121 IEYVVCKDNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRING 180
           +++VVC+D N K+ AFHNVC HHAS+LASG G+KSCFVC YHGWTY L G LVKATR++G
Sbjct: 122 VDFVVCRDENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHGWTYSLSGSLVKATRMSG 181

Query: 181 IQNFDVNDFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDK-VAHQWLGSCADVLSLNGV 240
           IQNF +++ GL PL VA WGPFVLL +    S + +V+ D+ VA +WLG+    LS  GV
Sbjct: 182 IQNFSLSEMGLKPLRVAVWGPFVLLKVTAATSRKGEVETDELVASEWLGTSVGRLSQGGV 241

Query: 241 DTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQS 300
           D+ LSY+CRREYTI+CNWKVFCDNYLDGGYHVPYAHKGL S L LE+YS  IFE VSIQ 
Sbjct: 242 DSPLSYICRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGLDLETYSTTIFEKVSIQE 301

Query: 301 CNGGGESKRDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IK 360
           C GG +   D + RLG EALYAF+YPNFMINRYGPWMDTNLVLPLGPRK    V D  + 
Sbjct: 302 CGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCKV-VFDYFLD 361

Query: 361 KTAWNDDSYIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLL 415
            +  +D+++I++SL +S+ VQ ED++L E VQ+GLESQAY  GRYA  VE  MHHFH LL
Sbjct: 362 PSLKDDEAFIKRSLEESDRVQMEDVMLCESVQRGLESQAYDKGRYA-LVEKPMHHFHCLL 420

[Close]
BLAST of Lsi06G006460 vs. ExPASy Swiss-Prot
Match: Q93XE1 (Choline monooxygenase, chloroplastic OS=Amaranthus tricolor OX=29722 GN=CMO PE=2 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 6.1e-113
Identity = 190/384 (49.48%), Postives = 258/384 (67.19%), Query Frame = 0 

Query: 33  ISAALSFRNSDSHFIEAQKLVDEFDPEIPLEKAVTPPSSWYIDPSFFALELDRVFYRGWQ 92
           I ++++  N  +     ++++ EFDP++P E   TPPS+WY DPS ++ ELDR+F +GWQ
Sbjct: 65  IPSSINSNNITTTTPNIKRIIHEFDPKVPAEDGFTPPSTWYTDPSLYSHELDRIFSKGWQ 124

Query: 93  AVGYVEQLKDPHDFFTGRLGNIEYVVCKDNNRKVRAFHNVCRHHASLLASGCGKKSCFVC 152
             GY +Q+K+P+ +FTG LGN+EY+VC+D   KV AFHNVC H AS+LA G GKKSCFVC
Sbjct: 125 VAGYSDQIKEPNQYFTGSLGNVEYLVCRDGQGKVHAFHNVCTHRASILACGTGKKSCFVC 184

Query: 153 PYHGWTYGLDGVLVKATRINGIQNFDVNDFGLIPLPVATWGPFVLLNLDGKLSSELDVDE 212
           PYHGW +GLDG L+KAT+    Q FD  + GL+ L VA WGPFVL++LD +  SE     
Sbjct: 185 PYHGWVFGLDGSLMKATKTEN-QVFDPKELGLVTLKVAIWGPFVLISLD-RSGSE---GT 244

Query: 213 DKVAHQWLGSCADVLSLNGVDTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLA 272
           + V  +W+GSCA+ +  +  D SL ++ R E+ +E NWKVFCDNYLD  YHVPYAHK  A
Sbjct: 245 EDVGKEWIGSCAEEVKKHAFDPSLQFINRSEFPMESNWKVFCDNYLDSAYHVPYAHKYYA 304

Query: 273 SNLKLESYSREIFETVSIQSCNGGGESKRDDYGRLGPEALYAFIYPNFMINRYGPWMDTN 332
           + L  ++Y  ++ E V IQ       +K + + RLG EA YAFIYPNF + RYGPWM T 
Sbjct: 305 AELDFDTYKTDLLEKVVIQRV-ASSSNKPNGFDRLGSEAFYAFIYPNFAVERYGPWMTTM 364

Query: 333 LVLPLGPRKFLTRVLD--IKKTAWNDDSYIQQSLADSESVQNEDIILYEGVQKGLESQAY 392
            + PLGPRK    V+D  ++    ND  YI++S+  +++VQ ED++L E VQ+GLE+ AY
Sbjct: 365 HIGPLGPRK-CKLVVDYYLENAMMNDKPYIEKSIMINDNVQKEDVVLCESVQRGLETPAY 424

Query: 393 TFGRYAPSVENAMHHFHRLLHFNL 415
             GRY   +E  +HHFH  LH  L
Sbjct: 425 RSGRYVMPIEKGIHHFHCWLHQTL 441

[Close]
BLAST of Lsi06G006460 vs. ExPASy Swiss-Prot
Match: Q9LKN0 (Choline monooxygenase, chloroplastic OS=Atriplex hortensis OX=34272 GN=CMO PE=2 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.4e-112
Identity = 185/364 (50.82%), Postives = 253/364 (69.51%), Query Frame = 0 

Query: 50  QKLVDEFDPEIPLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTG 109
           Q LV +FDP +P E A+TPPSSWY +P+F+A ELDR+FY+GWQ  GY +Q+K+ + +FTG
Sbjct: 80  QSLVKDFDPLVPAEDALTPPSSWYTEPAFYAHELDRIFYKGWQVAGYSDQVKEANQYFTG 139

Query: 110 RLGNIEYVVCKDNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKAT 169
            LGN+EY+VC+D   KV AFHNVC H AS+LA G GKKSCFVCPYHGW YG++G L KA+
Sbjct: 140 TLGNVEYLVCRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMNGSLTKAS 199

Query: 170 RINGIQNFDVNDFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSL 229
           +    Q+ + ++ GL+PL VA WGPF+L++LD    S  +V +  V  +WLGSCA+ +  
Sbjct: 200 KATPEQSLNPDELGLVPLKVAVWGPFILISLD---RSSREVGD--VGSEWLGSCAEDVKA 259

Query: 230 NGVDTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVS 289
           +  D +L ++ R E+ IE NWK+F DNYLD  YHVPYAHK  A+ L  ++Y  ++   V+
Sbjct: 260 HAFDPNLQFINRSEFPIESNWKIFSDNYLDSSYHVPYAHKYYATELDFDTYQTDMVGNVT 319

Query: 290 IQSCNGGGESKRDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD- 349
           IQ   G   +  + + RLG +A YAF YPNF + RYGPWM T  ++PLGPRK    V+D 
Sbjct: 320 IQRVAG---TSNNGFNRLGTQAFYAFAYPNFAVERYGPWMTTMHIVPLGPRK-CKLVVDY 379

Query: 350 -IKKTAWNDDSYIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFH 409
            I+K+  +D  YI++ +A +++VQ ED++L E VQKGLE+ AY  GRY   +E  +HHFH
Sbjct: 380 YIEKSKLDDKDYIEKGIAINDNVQKEDVVLCESVQKGLETPAYRSGRYVMPIEKGIHHFH 434

Query: 410 RLLH 412
             LH
Sbjct: 440 CWLH 434

[Close]
BLAST of Lsi06G006460 vs. ExPASy Swiss-Prot
Match: O22553 (Choline monooxygenase, chloroplastic OS=Beta vulgaris OX=161934 GN=CMO PE=2 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 4.0e-112
Identity = 187/367 (50.95%), Postives = 248/367 (67.57%), Query Frame = 0 

Query: 50  QKLVDEFDPEIPLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTG 109
           + LV EFDPEIP E A+TPPS+WY +P+F++ EL+R+FY+GWQ  GY EQ+K+ + +FTG
Sbjct: 86  RSLVHEFDPEIPPEDALTPPSTWYTEPAFYSHELERIFYKGWQVAGYSEQVKEKNQYFTG 145

Query: 110 RLGNIEYVVCKDNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKAT 169
            LGN+EY+V +D   ++ AFHNVC H AS+LA G GKKSCFVCPYHGW YGLDG L KA+
Sbjct: 146 SLGNVEYLVSRDGQGELHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGLDGSLAKAS 205

Query: 170 RINGIQNFDVNDFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSL 229
           +    QN D  + GL PL VA WGPF+L++LD  L +  D     V  +W+G  A+ +  
Sbjct: 206 KATETQNLDPKELGLAPLKVAEWGPFILISLDRSLDANAD-----VGTEWIGKSAEDVKA 265

Query: 230 NGVDTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVS 289
           +  D +L +  R E+ +ECNWKVFCDNYLD  YHVPYAHK  A+ L  ++Y+ E+ E   
Sbjct: 266 HAFDPNLKFTHRSEFPMECNWKVFCDNYLDSSYHVPYAHKYYAAELDFDTYNTEMIEKCV 325

Query: 290 IQSCNGGGESKRDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD- 349
           IQ   G   +K D + RLG EA YAFIYPNF + RYG WM T  V+P+G RK    V+D 
Sbjct: 326 IQRV-GSSSNKPDGFDRLGTEAFYAFIYPNFAVERYGTWMTTMHVVPMGQRK-CKLVVDY 385

Query: 350 -IKKTAWNDDSYIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFH 409
            ++K   +D +YI + +A +++VQ ED +L E VQ+GLE+ AY  GRY   +E  +HHFH
Sbjct: 386 YLEKAMLDDKAYIDKGIAINDNVQKEDKVLCESVQRGLETPAYRSGRYVMPIEKGIHHFH 445

Query: 410 RLLHFNL 415
             LH  L
Sbjct: 446 CWLHETL 445

[Close]
BLAST of Lsi06G006460 vs. ExPASy Swiss-Prot
Match: O04121 (Choline monooxygenase, chloroplastic OS=Spinacia oleracea OX=3562 GN=CMO PE=1 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 4.4e-111
Identity = 194/399 (48.62%), Postives = 264/399 (66.17%), Query Frame = 0 

Query: 16  PSTTFNLHSCNNRSPKRIS----AALSFRN-SDSHFIEAQKLVDEFDPEIPLEKAVTPPS 75
           P  T N  +  +R+P +I+    AA SF + + +     Q LV EFDP+IP E A TPPS
Sbjct: 41  PQNTTN-PTLKSRTPNKITTNAVAAPSFPSLTTTTPSSIQSLVHEFDPQIPPEDAHTPPS 100

Query: 76  SWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCKDNNRKVRAFH 135
           SWY +P+F++ EL+R+FY+GWQ  G  +Q+K+P+ +FTG LGN+EY+V +D   KV AFH
Sbjct: 101 SWYTEPAFYSHELERIFYKGWQVAGISDQIKEPNQYFTGSLGNVEYLVSRDGEGKVHAFH 160

Query: 136 NVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVNDFGLIPLPVA 195
           NVC H AS+LA G GKKSCFVCPYHGW YG+DG L KA++    QN D  + GL+PL VA
Sbjct: 161 NVCTHRASILACGSGKKSCFVCPYHGWVYGMDGSLAKASKAKPEQNLDPKELGLVPLKVA 220

Query: 196 TWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVCRREYTIECNW 255
            WGPFVL++LD  L    D     V  +WLG+ A+ +  +  D SL ++ R E+ +E NW
Sbjct: 221 VWGPFVLISLDRSLEEGGD-----VGTEWLGTSAEDVKAHAFDPSLQFIHRSEFPMESNW 280

Query: 256 KVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESKRDDYGRLGPE 315
           K+F DNYLD  YHVPYAHK  A+ L  ++Y  ++ E V+IQ    G  +K D + R+G +
Sbjct: 281 KIFSDNYLDSSYHVPYAHKYYATELNFDTYDTQMIENVTIQRVE-GSSNKPDGFDRVGIQ 340

Query: 316 ALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDSYIQQSLADSE 375
           A YAF YPNF + RYGPWM T  + PLGPRK    V+D  I+ +  +D  YI++ +A ++
Sbjct: 341 AFYAFAYPNFAVERYGPWMTTMHIHPLGPRK-CKLVVDYYIENSMLDDKDYIEKGIAIND 400

Query: 376 SVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFH 408
           +VQ ED++L E VQ+GLE+ AY  GRY   +E  +HHFH
Sbjct: 401 NVQREDVVLCESVQRGLETPAYRSGRYVMPIEKGIHHFH 431

[Close]
BLAST of Lsi06G006460 vs. ExPASy TrEMBL
Match: A0A5D3BWX2 (Choline monooxygenase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold758G00070 PE=3 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 3.0e-219
Identity = 362/417 (86.81%), Postives = 385/417 (92.33%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEI 60
           MATLTKHI  HFFQPPS +FN H CN+RSP RISA+LSFR+ DS FIEA+KLVD+FDPEI
Sbjct: 1   MATLTKHIQIHFFQPPSISFNFHFCNHRSPSRISASLSFRSPDSRFIEARKLVDDFDPEI 60

Query: 61  PLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCK 120
           PLEKA+TPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKD HDFFTGRLGN+EYVVCK
Sbjct: 61  PLEKALTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDAHDFFTGRLGNVEYVVCK 120

Query: 121 DNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVN 180
           DNNRKVRAFHNVCRHHASLLA+GCGKKSCFVCPYHGWTYGLDG+L+KATRINGIQNF+ N
Sbjct: 121 DNNRKVRAFHNVCRHHASLLATGCGKKSCFVCPYHGWTYGLDGILLKATRINGIQNFNEN 180

Query: 181 DFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVC 240
           DFGL+PLPVA WGPFVLLNLDGKLSS++DVDEDKVA +WLG+CADVL LNGVD SLSYVC
Sbjct: 181 DFGLVPLPVAMWGPFVLLNLDGKLSSKVDVDEDKVAREWLGTCADVLRLNGVDASLSYVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESK 300
           RREYTI+CNWKVFCDNYLDGGYHVPYAHKGLASNL LESYS E+FETVSIQSC GGGESK
Sbjct: 241 RREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASNLNLESYSTELFETVSIQSCKGGGESK 300

Query: 301 RDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDS 360
            DDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRK L  V D  ++ +  NDDS
Sbjct: 301 GDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKCLV-VFDYFLESSFKNDDS 360

Query: 361 YIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLT 416
           +IQQSL DSESVQNEDIIL EGVQKGLES AY FGRYAPSVENAMHHFHRLLH NLT
Sbjct: 361 FIQQSLEDSESVQNEDIILCEGVQKGLESPAYKFGRYAPSVENAMHHFHRLLHRNLT 416

[Close]
BLAST of Lsi06G006460 vs. ExPASy TrEMBL
Match: A0A5A7UY48 (Choline monooxygenase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold542G00540 PE=3 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.1e-218
Identity = 362/417 (86.81%), Postives = 384/417 (92.09%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEI 60
           MATLTKHI  HFFQPPS +FN H CN+RSP RISA+LSFR+ DS FIEA+KLVD+FDPEI
Sbjct: 1   MATLTKHIQIHFFQPPSISFNFHFCNHRSPSRISASLSFRSPDSRFIEARKLVDDFDPEI 60

Query: 61  PLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCK 120
           PLEKA+TPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKD HDFFTGRLGN+EYVVCK
Sbjct: 61  PLEKALTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDAHDFFTGRLGNVEYVVCK 120

Query: 121 DNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVN 180
           DNNRKVRAFHNVCRHHASLLA+GCGKKSCFVCPYHGWTYGLDG+L+KATRINGIQNF+ N
Sbjct: 121 DNNRKVRAFHNVCRHHASLLATGCGKKSCFVCPYHGWTYGLDGILLKATRINGIQNFNEN 180

Query: 181 DFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVC 240
           DFGL+PLPVA WGPFVLLNLDGKLSS+ DVDEDKVA +WLG+CADVL LNGVD SLSYVC
Sbjct: 181 DFGLVPLPVAMWGPFVLLNLDGKLSSKPDVDEDKVAREWLGTCADVLRLNGVDASLSYVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESK 300
           RREYTI+CNWKVFCDNYLDGGYHVPYAHKGLASNL LESYS E+FETVSIQSC GGGESK
Sbjct: 241 RREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASNLNLESYSTELFETVSIQSCKGGGESK 300

Query: 301 RDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDS 360
            DDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRK L  V D  ++ +  NDDS
Sbjct: 301 GDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKCLV-VFDYFLEASFKNDDS 360

Query: 361 YIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLT 416
           +IQQSL DSESVQNEDIIL EGVQKGLES AY FGRYAPSVENAMHHFHRLLH NLT
Sbjct: 361 FIQQSLEDSESVQNEDIILCEGVQKGLESPAYKFGRYAPSVENAMHHFHRLLHRNLT 416

[Close]
BLAST of Lsi06G006460 vs. ExPASy TrEMBL
Match: A0A1S3B9A0 (Choline monooxygenase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487183 PE=3 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.1e-218
Identity = 362/417 (86.81%), Postives = 384/417 (92.09%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEI 60
           MATLTKHI  HFFQPPS +FN H CN+RSP RISA+LSFR+ DS FIEA+KLVD+FDPEI
Sbjct: 1   MATLTKHIQIHFFQPPSISFNFHFCNHRSPSRISASLSFRSPDSRFIEARKLVDDFDPEI 60

Query: 61  PLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCK 120
           PLEKA+TPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKD HDFFTGRLGN+EYVVCK
Sbjct: 61  PLEKALTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDAHDFFTGRLGNVEYVVCK 120

Query: 121 DNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVN 180
           DNNRKVRAFHNVCRHHASLLA+GCGKKSCFVCPYHGWTYGLDG+L+KATRINGIQNF+ N
Sbjct: 121 DNNRKVRAFHNVCRHHASLLATGCGKKSCFVCPYHGWTYGLDGILLKATRINGIQNFNEN 180

Query: 181 DFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVC 240
           DFGL+PLPVA WGPFVLLNLDGKLSS+ DVDEDKVA +WLG+CADVL LNGVD SLSYVC
Sbjct: 181 DFGLVPLPVAMWGPFVLLNLDGKLSSKPDVDEDKVAREWLGTCADVLRLNGVDASLSYVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESK 300
           RREYTI+CNWKVFCDNYLDGGYHVPYAHKGLASNL LESYS E+FETVSIQSC GGGESK
Sbjct: 241 RREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASNLNLESYSTELFETVSIQSCKGGGESK 300

Query: 301 RDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDS 360
            DDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRK L  V D  ++ +  NDDS
Sbjct: 301 GDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKCLV-VFDYFLEASFKNDDS 360

Query: 361 YIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLT 416
           +IQQSL DSESVQNEDIIL EGVQKGLES AY FGRYAPSVENAMHHFHRLLH NLT
Sbjct: 361 FIQQSLEDSESVQNEDIILCEGVQKGLESPAYKFGRYAPSVENAMHHFHRLLHRNLT 416

[Close]
BLAST of Lsi06G006460 vs. ExPASy TrEMBL
Match: A0A6J1HPX3 (Choline monooxygenase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464984 PE=3 SV=1)

HSP 1 Score: 764.2 bits (1972), Expect = 2.8e-217
Identity = 364/417 (87.29%), Postives = 381/417 (91.37%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEI 60
           MA LTKHIHTHFFQP   +FN  S + RSP RIS+ LSFRNSDSHFIEA KLVDEFDPEI
Sbjct: 1   MAALTKHIHTHFFQPLFASFNFQSRSYRSPTRISSTLSFRNSDSHFIEALKLVDEFDPEI 60

Query: 61  PLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCK 120
           PLEKAVTPPSSWY DPSFFALELDRVF+RGWQAVGYVEQLKDPHDFFTGRLGN+EYVVCK
Sbjct: 61  PLEKAVTPPSSWYTDPSFFALELDRVFHRGWQAVGYVEQLKDPHDFFTGRLGNVEYVVCK 120

Query: 121 DNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVN 180
           DNN+KVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDG L+KATRINGIQNFDVN
Sbjct: 121 DNNKKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGGLLKATRINGIQNFDVN 180

Query: 181 DFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVC 240
           DFGL+PLPVATWGPFVLLNLD KLSSEL VDED+VAH+WLGSCAD+LSLNGVD SLS+VC
Sbjct: 181 DFGLVPLPVATWGPFVLLNLDEKLSSELVVDEDEVAHEWLGSCADLLSLNGVDASLSFVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESK 300
           RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYS EIFE VSIQSC GGGESK
Sbjct: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSTEIFEAVSIQSCKGGGESK 300

Query: 301 RDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDS 360
            DDYGRLGPEALYAF+YPNFMINRYGPWMDTNLVLPLGPRK L  V D  ++    ND+S
Sbjct: 301 GDDYGRLGPEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCLV-VFDYFLETPFKNDES 360

Query: 361 YIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLT 416
           +IQQSL DSESVQ EDIIL EGVQKGLES AY FGRYAPSVENAMHHFHRLLH NLT
Sbjct: 361 FIQQSLEDSESVQIEDIILCEGVQKGLESPAYKFGRYAPSVENAMHHFHRLLHLNLT 416

[Close]
BLAST of Lsi06G006460 vs. ExPASy TrEMBL
Match: A0A6J1JGJ2 (Choline monooxygenase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484916 PE=3 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 1.8e-216
Identity = 362/417 (86.81%), Postives = 381/417 (91.37%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEI 60
           MA LTKHIHTHFFQP   +FN  S ++RSP RIS  LSFRNSDSHFIEA KLVDEFDPEI
Sbjct: 1   MAALTKHIHTHFFQPLFASFNFQSRSHRSPTRISPTLSFRNSDSHFIEALKLVDEFDPEI 60

Query: 61  PLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCK 120
           PLEKAVTPPSSWY DPSFFALELDRVF+RGWQAVGYVEQLKDPHDFFTGRLGN+EYVVCK
Sbjct: 61  PLEKAVTPPSSWYTDPSFFALELDRVFHRGWQAVGYVEQLKDPHDFFTGRLGNVEYVVCK 120

Query: 121 DNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVN 180
           DNN+KVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDG L+KATRINGIQNFDVN
Sbjct: 121 DNNKKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGGLLKATRINGIQNFDVN 180

Query: 181 DFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVC 240
           DFGL+PLPVATWGPFVLLN+D KLSSEL VDEDKVA++WLGSCAD+LSLNGVD SLS+VC
Sbjct: 181 DFGLVPLPVATWGPFVLLNMDEKLSSELVVDEDKVAYEWLGSCADLLSLNGVDASLSFVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESK 300
           RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYS EIFE VSIQSC GGGESK
Sbjct: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSTEIFEAVSIQSCKGGGESK 300

Query: 301 RDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDS 360
            DDYGRLGPEALYAF+YPNFMINRYGPWMDTNLVLPLGP+K L  V D  ++    ND+S
Sbjct: 301 GDDYGRLGPEALYAFVYPNFMINRYGPWMDTNLVLPLGPQKCLV-VFDYFLETPFKNDES 360

Query: 361 YIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLT 416
           +IQQSL DSESVQ EDIIL EGVQKGLES AY FGRYAPSVENAMHHFHRLLH NLT
Sbjct: 361 FIQQSLEDSESVQIEDIILCEGVQKGLESPAYKFGRYAPSVENAMHHFHRLLHLNLT 416

[Close]
BLAST of Lsi06G006460 vs. NCBI nr
Match: XP_038880722.1 (choline monooxygenase, chloroplastic [Benincasa hispida])

HSP 1 Score: 787.7 bits (2033), Expect = 4.9e-224
Identity = 373/417 (89.45%), Postives = 390/417 (93.53%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEI 60
           MATLTKHIHTHFFQPPS +FNLHSCN+RSP RISAALSFRNSDSHFIEAQKLVDEFDPEI
Sbjct: 1   MATLTKHIHTHFFQPPSISFNLHSCNHRSPSRISAALSFRNSDSHFIEAQKLVDEFDPEI 60

Query: 61  PLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCK 120
           PLEKAVTPPSSWYIDPSF+ALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGN+EYVVCK
Sbjct: 61  PLEKAVTPPSSWYIDPSFYALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNVEYVVCK 120

Query: 121 DNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVN 180
           DNNRKVRAFHNVCRHHASLLASGCGK+SCFVCPYHGWTYGLDGVL+KATRINGIQNFD N
Sbjct: 121 DNNRKVRAFHNVCRHHASLLASGCGKRSCFVCPYHGWTYGLDGVLLKATRINGIQNFDEN 180

Query: 181 DFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVC 240
           +FGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKV  +WLGSCAD+LSLNGVD SLSYVC
Sbjct: 181 NFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVPGEWLGSCADLLSLNGVDASLSYVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESK 300
           RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKL+SYS EIFETVSIQSC GGGE+K
Sbjct: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLDSYSTEIFETVSIQSCKGGGEAK 300

Query: 301 RDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDS 360
            +DYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLG RK L  V D  ++ +  ND  
Sbjct: 301 GNDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGARKCLV-VFDYFLEASFKNDGP 360

Query: 361 YIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLT 416
           +IQ+SL DSESVQ EDIIL EGVQKGLES AY FGRYAPSVENAMHHFHRLLH NLT
Sbjct: 361 FIQRSLEDSESVQKEDIILCEGVQKGLESPAYKFGRYAPSVENAMHHFHRLLHLNLT 416

[Close]
BLAST of Lsi06G006460 vs. NCBI nr
Match: TYK04233.1 (choline monooxygenase [Cucumis melo var. makuwa])

HSP 1 Score: 770.8 bits (1989), Expect = 6.1e-219
Identity = 362/417 (86.81%), Postives = 385/417 (92.33%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEI 60
           MATLTKHI  HFFQPPS +FN H CN+RSP RISA+LSFR+ DS FIEA+KLVD+FDPEI
Sbjct: 1   MATLTKHIQIHFFQPPSISFNFHFCNHRSPSRISASLSFRSPDSRFIEARKLVDDFDPEI 60

Query: 61  PLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCK 120
           PLEKA+TPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKD HDFFTGRLGN+EYVVCK
Sbjct: 61  PLEKALTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDAHDFFTGRLGNVEYVVCK 120

Query: 121 DNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVN 180
           DNNRKVRAFHNVCRHHASLLA+GCGKKSCFVCPYHGWTYGLDG+L+KATRINGIQNF+ N
Sbjct: 121 DNNRKVRAFHNVCRHHASLLATGCGKKSCFVCPYHGWTYGLDGILLKATRINGIQNFNEN 180

Query: 181 DFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVC 240
           DFGL+PLPVA WGPFVLLNLDGKLSS++DVDEDKVA +WLG+CADVL LNGVD SLSYVC
Sbjct: 181 DFGLVPLPVAMWGPFVLLNLDGKLSSKVDVDEDKVAREWLGTCADVLRLNGVDASLSYVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESK 300
           RREYTI+CNWKVFCDNYLDGGYHVPYAHKGLASNL LESYS E+FETVSIQSC GGGESK
Sbjct: 241 RREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASNLNLESYSTELFETVSIQSCKGGGESK 300

Query: 301 RDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDS 360
            DDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRK L  V D  ++ +  NDDS
Sbjct: 301 GDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKCLV-VFDYFLESSFKNDDS 360

Query: 361 YIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLT 416
           +IQQSL DSESVQNEDIIL EGVQKGLES AY FGRYAPSVENAMHHFHRLLH NLT
Sbjct: 361 FIQQSLEDSESVQNEDIILCEGVQKGLESPAYKFGRYAPSVENAMHHFHRLLHRNLT 416

[Close]
BLAST of Lsi06G006460 vs. NCBI nr
Match: XP_008443631.1 (PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Cucumis melo] >KAA0060178.1 choline monooxygenase [Cucumis melo var. makuwa])

HSP 1 Score: 768.8 bits (1984), Expect = 2.3e-218
Identity = 362/417 (86.81%), Postives = 384/417 (92.09%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEI 60
           MATLTKHI  HFFQPPS +FN H CN+RSP RISA+LSFR+ DS FIEA+KLVD+FDPEI
Sbjct: 1   MATLTKHIQIHFFQPPSISFNFHFCNHRSPSRISASLSFRSPDSRFIEARKLVDDFDPEI 60

Query: 61  PLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCK 120
           PLEKA+TPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKD HDFFTGRLGN+EYVVCK
Sbjct: 61  PLEKALTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDAHDFFTGRLGNVEYVVCK 120

Query: 121 DNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVN 180
           DNNRKVRAFHNVCRHHASLLA+GCGKKSCFVCPYHGWTYGLDG+L+KATRINGIQNF+ N
Sbjct: 121 DNNRKVRAFHNVCRHHASLLATGCGKKSCFVCPYHGWTYGLDGILLKATRINGIQNFNEN 180

Query: 181 DFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVC 240
           DFGL+PLPVA WGPFVLLNLDGKLSS+ DVDEDKVA +WLG+CADVL LNGVD SLSYVC
Sbjct: 181 DFGLVPLPVAMWGPFVLLNLDGKLSSKPDVDEDKVAREWLGTCADVLRLNGVDASLSYVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESK 300
           RREYTI+CNWKVFCDNYLDGGYHVPYAHKGLASNL LESYS E+FETVSIQSC GGGESK
Sbjct: 241 RREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASNLNLESYSTELFETVSIQSCKGGGESK 300

Query: 301 RDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDS 360
            DDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRK L  V D  ++ +  NDDS
Sbjct: 301 GDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKCLV-VFDYFLEASFKNDDS 360

Query: 361 YIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLT 416
           +IQQSL DSESVQNEDIIL EGVQKGLES AY FGRYAPSVENAMHHFHRLLH NLT
Sbjct: 361 FIQQSLEDSESVQNEDIILCEGVQKGLESPAYKFGRYAPSVENAMHHFHRLLHRNLT 416

[Close]
BLAST of Lsi06G006460 vs. NCBI nr
Match: XP_022965039.1 (choline monooxygenase, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 764.2 bits (1972), Expect = 5.7e-217
Identity = 364/417 (87.29%), Postives = 381/417 (91.37%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEI 60
           MA LTKHIHTHFFQP   +FN  S + RSP RIS+ LSFRNSDSHFIEA KLVDEFDPEI
Sbjct: 1   MAALTKHIHTHFFQPLFASFNFQSRSYRSPTRISSTLSFRNSDSHFIEALKLVDEFDPEI 60

Query: 61  PLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCK 120
           PLEKAVTPPSSWY DPSFFALELDRVF+RGWQAVGYVEQLKDPHDFFTGRLGN+EYVVCK
Sbjct: 61  PLEKAVTPPSSWYTDPSFFALELDRVFHRGWQAVGYVEQLKDPHDFFTGRLGNVEYVVCK 120

Query: 121 DNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVN 180
           DNN+KVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDG L+KATRINGIQNFDVN
Sbjct: 121 DNNKKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGGLLKATRINGIQNFDVN 180

Query: 181 DFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVC 240
           DFGL+PLPVATWGPFVLLNLD KLSSEL VDED+VAH+WLGSCAD+LSLNGVD SLS+VC
Sbjct: 181 DFGLVPLPVATWGPFVLLNLDEKLSSELVVDEDEVAHEWLGSCADLLSLNGVDASLSFVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESK 300
           RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYS EIFE VSIQSC GGGESK
Sbjct: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSTEIFEAVSIQSCKGGGESK 300

Query: 301 RDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDS 360
            DDYGRLGPEALYAF+YPNFMINRYGPWMDTNLVLPLGPRK L  V D  ++    ND+S
Sbjct: 301 GDDYGRLGPEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCLV-VFDYFLETPFKNDES 360

Query: 361 YIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLT 416
           +IQQSL DSESVQ EDIIL EGVQKGLES AY FGRYAPSVENAMHHFHRLLH NLT
Sbjct: 361 FIQQSLEDSESVQIEDIILCEGVQKGLESPAYKFGRYAPSVENAMHHFHRLLHLNLT 416

[Close]
BLAST of Lsi06G006460 vs. NCBI nr
Match: XP_022987330.1 (choline monooxygenase, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 761.5 bits (1965), Expect = 3.7e-216
Identity = 362/417 (86.81%), Postives = 381/417 (91.37%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTTFNLHSCNNRSPKRISAALSFRNSDSHFIEAQKLVDEFDPEI 60
           MA LTKHIHTHFFQP   +FN  S ++RSP RIS  LSFRNSDSHFIEA KLVDEFDPEI
Sbjct: 1   MAALTKHIHTHFFQPLFASFNFQSRSHRSPTRISPTLSFRNSDSHFIEALKLVDEFDPEI 60

Query: 61  PLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGNIEYVVCK 120
           PLEKAVTPPSSWY DPSFFALELDRVF+RGWQAVGYVEQLKDPHDFFTGRLGN+EYVVCK
Sbjct: 61  PLEKAVTPPSSWYTDPSFFALELDRVFHRGWQAVGYVEQLKDPHDFFTGRLGNVEYVVCK 120

Query: 121 DNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRINGIQNFDVN 180
           DNN+KVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDG L+KATRINGIQNFDVN
Sbjct: 121 DNNKKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGGLLKATRINGIQNFDVN 180

Query: 181 DFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDKVAHQWLGSCADVLSLNGVDTSLSYVC 240
           DFGL+PLPVATWGPFVLLN+D KLSSEL VDEDKVA++WLGSCAD+LSLNGVD SLS+VC
Sbjct: 181 DFGLVPLPVATWGPFVLLNMDEKLSSELVVDEDKVAYEWLGSCADLLSLNGVDASLSFVC 240

Query: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQSCNGGGESK 300
           RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYS EIFE VSIQSC GGGESK
Sbjct: 241 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSTEIFEAVSIQSCKGGGESK 300

Query: 301 RDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IKKTAWNDDS 360
            DDYGRLGPEALYAF+YPNFMINRYGPWMDTNLVLPLGP+K L  V D  ++    ND+S
Sbjct: 301 GDDYGRLGPEALYAFVYPNFMINRYGPWMDTNLVLPLGPQKCLV-VFDYFLETPFKNDES 360

Query: 361 YIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLLHFNLT 416
           +IQQSL DSESVQ EDIIL EGVQKGLES AY FGRYAPSVENAMHHFHRLLH NLT
Sbjct: 361 FIQQSLEDSESVQIEDIILCEGVQKGLESPAYKFGRYAPSVENAMHHFHRLLHLNLT 416

[Close]
BLAST of Lsi06G006460 vs. TAIR 10
Match: AT4G29890.1 (choline monooxygenase, putative (CMO-like) )

HSP 1 Score: 513.5 bits (1321), Expect = 1.6e-145
Identity = 258/424 (60.85%), Postives = 308/424 (72.64%), Query Frame = 0 

Query: 1   MATLTKHIHTHFFQPPSTT-----FNLHSCNNRSPKRISAALSFRNSDSHFI--EAQKLV 60
           M TLT  +    F PPS       FN HS    S  + S    F N    F   +  KLV
Sbjct: 2   MTTLTATVPE--FLPPSLKSTRGYFNSHSEFGVSISKFSRR-RFHNPTRVFAVSDISKLV 61

Query: 61  DEFDPEIPLEKAVTPPSSWYIDPSFFALELDRVFYRGWQAVGYVEQLKDPHDFFTGRLGN 120
            EFDP+IPLE+A TPPSSWY DP F++ ELDRVFY GWQAVGY +Q+K+  DFFTGRLG+
Sbjct: 62  TEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAVGYSDQIKESRDFFTGRLGD 121

Query: 121 IEYVVCKDNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGVLVKATRING 180
           +++VVC+D N K+ AFHNVC HHAS+LASG G+KSCFVC YHGWTY L G LVKATR++G
Sbjct: 122 VDFVVCRDENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHGWTYSLSGSLVKATRMSG 181

Query: 181 IQNFDVNDFGLIPLPVATWGPFVLLNLDGKLSSELDVDEDK-VAHQWLGSCADVLSLNGV 240
           IQNF +++ GL PL VA WGPFVLL +    S + +V+ D+ VA +WLG+    LS  GV
Sbjct: 182 IQNFSLSEMGLKPLRVAVWGPFVLLKVTAATSRKGEVETDELVASEWLGTSVGRLSQGGV 241

Query: 241 DTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSREIFETVSIQS 300
           D+ LSY+CRREYTI+CNWKVFCDNYLDGGYHVPYAHKGL S L LE+YS  IFE VSIQ 
Sbjct: 242 DSPLSYICRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGLDLETYSTTIFEKVSIQE 301

Query: 301 CNGGGESKRDDYGRLGPEALYAFIYPNFMINRYGPWMDTNLVLPLGPRKFLTRVLD--IK 360
           C GG +   D + RLG EALYAF+YPNFMINRYGPWMDTNLVLPLGPRK    V D  + 
Sbjct: 302 CGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCKV-VFDYFLD 361

Query: 361 KTAWNDDSYIQQSLADSESVQNEDIILYEGVQKGLESQAYTFGRYAPSVENAMHHFHRLL 415
            +  +D+++I++SL +S+ VQ ED++L E VQ+GLESQAY  GRYA  VE  MHHFH LL
Sbjct: 362 PSLKDDEAFIKRSLEESDRVQMEDVMLCESVQRGLESQAYDKGRYA-LVEKPMHHFHCLL 420

The following BLAST results are available for this feature:
BLAST of Lsi06G006460 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZR02.3e-14460.85Choline monooxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g2989... [more]
Q93XE16.1e-11349.48Choline monooxygenase, chloroplastic OS=Amaranthus tricolor OX=29722 GN=CMO PE=2... [more]
Q9LKN01.4e-11250.82Choline monooxygenase, chloroplastic OS=Atriplex hortensis OX=34272 GN=CMO PE=2 ... [more]
O225534.0e-11250.95Choline monooxygenase, chloroplastic OS=Beta vulgaris OX=161934 GN=CMO PE=2 SV=1[more]
O041214.4e-11148.62Choline monooxygenase, chloroplastic OS=Spinacia oleracea OX=3562 GN=CMO PE=1 SV... [more]
BLAST of Lsi06G006460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BWX23.0e-21986.81Choline monooxygenase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7UY481.1e-21886.81Choline monooxygenase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3B9A01.1e-21886.81Choline monooxygenase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487183 PE=... [more]
A0A6J1HPX32.8e-21787.29Choline monooxygenase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114649... [more]
A0A6J1JGJ21.8e-21686.81Choline monooxygenase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484916... [more]
BLAST of Lsi06G006460 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038880722.14.9e-22489.45choline monooxygenase, chloroplastic [Benincasa hispida][more]
TYK04233.16.1e-21986.81choline monooxygenase [Cucumis melo var. makuwa][more]
XP_008443631.12.3e-21886.81PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Cucumis melo] >KAA00... [more]
XP_022965039.15.7e-21787.29choline monooxygenase, chloroplastic isoform X1 [Cucurbita moschata][more]
XP_022987330.13.7e-21686.81choline monooxygenase, chloroplastic isoform X2 [Cucurbita maxima][more]
BLAST of Lsi06G006460 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29890.11.6e-14560.85choline monooxygenase, putative (CMO-like) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001663Aromatic-ring-hydroxylating dioxygenase, alpha subunitPRINTSPR00090RNGDIOXGNASEcoord: 75..100
score: 32.05
coord: 146..166
score: 46.53
coord: 234..256
score: 23.01
coord: 105..120
score: 26.56
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 91..170
e-value: 7.1E-16
score: 57.9
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 91..198
score: 25.789042
NoneNo IPR availableGENE3D3.90.380.10coord: 210..293
e-value: 9.2E-6
score: 27.3
NoneNo IPR availableGENE3D3.90.380.10coord: 294..418
e-value: 9.1E-20
score: 73.1
NoneNo IPR availablePANTHERPTHR43756:SF5CHOLINE MONOOXYGENASE, CHLOROPLASTICcoord: 48..416
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 218..410
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 88..206
e-value: 6.3E-31
score: 108.4
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 53..201
IPR015879Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domainPFAMPF00848Ring_hydroxyl_Acoord: 240..279
e-value: 5.2E-9
score: 36.4
coord: 311..408
e-value: 6.7E-11
score: 42.6
IPR044637Aromatic-ring-hydroxylating dioxygenasePANTHERPTHR43756CHOLINE MONOOXYGENASE, CHLOROPLASTICcoord: 48..416

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G006460.1Lsi06G006460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019285 glycine betaine biosynthetic process from choline
biological_process GO:0044237 cellular metabolic process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031967 organelle envelope
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0019133 choline monooxygenase activity
molecular_function GO:0005506 iron ion binding