Lsi06G005350 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G005350
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr06: 6620643 .. 6623280 (-)
RNA-Seq ExpressionLsi06G005350
SyntenyLsi06G005350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCATTCAGCCGCTGGTCCAGCACCTGAAGCCTAGACCCTTCGTCTGTTCACCAGCGTTCACAGCAACGTTCTCCGTTCAGGTTCGCCGGTCCTCATAGCTAAGATTTTGTCTGATTTTGCAGGAAGCCCGAAAGCGTTTCCCCTGAGAAGCTCCCGAAGTAAGTTTACCTATTAATTTCCCCCCATTCAATTAGTGTCTTTCTGCTGCATAGGTTGATCTCAAGTGGTGTTTATTGGGGTTTTTGTTGCTTTCCTTCATAATGTGTGAATGTTATTTTCTAATTTAACTAGTCGTTTTGAAATTTAATGAGGGATGCTGATTATTTAGGTTAAGAACTGTAACTTTAGTCCTTATCAATAAGTGGAGATTTTTGTAAGCATGACCCAAATTTGGTTTCACTAATGTTAAATGGTGTGAATTCTGAAAGTAATGAAAACTATCCTTTTATTTGTGTGACAAAGCAATGACTAAGGTTAAATTGCCCATTCACAATCGTGGGTCTCATCCATAGTGAATCGATGAGACCCCAAGTTCGATTTCACGTTTGTAAAAAGTCATAAGATCGTTAAATTTTAATAATGGGCGAGAATTTTTATTTTTATAAAAATCACAATGCATCTTGAAATAGTGTTGAGCTCTAGGGAGAATTTAATGTTGGTCGGTACTTTGTGGCGTAAGCAAAATGTTAGTTTTTCATTGTTTTAAGAATGTAGGTCATTGGACTATAACACAACCAAATTTAAATCATCTATACAAAAGAAAACTGTGGACTGGCTGAATTAATTTTAAGGACTGTGGTTGAATGTTTACAATTTTGTGCATTTGAACCTATTCGCTGATATGTTTAGACCTCTTACTCACTGAACAGCAATAATGGAACCGCTGTGAATTAAACTACACATTTGGTAAATACACGGTGCTTTAAAATTCCCCTCTTTTCTCTGTTTTATGTTCAAATCTTGCCTTCATCACCTTTTGTTTTTTGTTTGTGGATTCAAACATTTGAGGAATGTGATTTTGATTTTAAGAGCGATGGAGATGATTAAGGAACCAAATGATGAGCGTCTTCCAAAGAAGATGTAACCATGATGTTGACCGAACAGCTTTTAGCTACTGGGGATTAGTTCTGGTCACTGATGGTTCTTTCTTATTGTTGTTGTTGTTGTTGTTGTGGGAACTCTTAACCTTTTGAATAGATACACCTACTTGACTTAGCCAAAATTGGTGATTCTGATGGTTCCTTAGTTCATCATTGCTCTATGTAGTTTTAGTTTTGATTTTGATTTTGATTTTAGAAGTATCCGTTCTTTCAGGACTTTCAAATCTATTTTCACGCTTGATTTTGATTGATGTGGTTTGGATGAATTAAAATAATTTTCAATGGTTTCGGGATGGTTGTTAGCAAAGCTTGTAGTCCTTTTGTCTAAGTCATTGTTATATAAACAATTTGTAGTCCTTTTATCTTGGTCATTGTTAAAATAATTTTCAAACCTTTCTGGATGGTTGTTAGCATATCATAGAATGACTTCTCATTTCTCTCCTTTTGGCTGTACCACTTTTTCTATCTATTTAAATTGATTTTTCAGCATGCCAGTATGTCATAACTGTTGAATCATTTGTTATATGACTTCTCCTTTTCCGCATTGGCTTGTGAATTAATGCAGAAATGATAGTGGTGTTCATTGTTTGTTGAATTTTTTATGTTTAAGATTGTTAGCATGAACAAGAAAGTCATTTCCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAACACAGGCACAGAAGCCCTTGCTAATGAGAATTTTAATTAAGGGTTAGTAGCCTAATTACGAACTCTGTTGCCATGTCTTATTTCCATTTGAATTTAATCTTACATATTGATTTTGTTTAGTTTAATGCAGTTAAATTACAAAACTATATGAATCTTGGTCCTTTCAAAATGTGATGATCACCTTCAAAATTTGATTACTTTTTTCCACGCCCTTTTCCAGCATCATTTCATGATATCTTCCATTGTCATCTGATGTCTCTCATGTTCAGCTACAGAATTCTTTTGAAAGACTTATGTTGAGGAATTCAACATTGAAGCTTATGTTCCTGTCAGTTCCTGTCAGCTCCTGTCAGCTAATGACTATTGTGAGTAAGTAGGCTTTTGGATCACTGGCCAGATGCTTTTTGAATTATCCTTATGCTTAATTGCTAACAATATACATGGTGAAGTAAATAAAATTTTTTCAAGCTTCTTCAGAAAAATGGGGATTTATGTGAAGGTTAAGACAAACGGAAAGGTACAAATTTCCTTCTCTTACTCTTCTCCCAAACTTAAATAGCACGAATAAAGAACCTAGTTGAATTTGAATTTCGGGGCTAGCTCAATTGAGCAATAATGGAACAATTGTGAATGAAACTACATAAGAGAAAATGGTAAGTACACCGTGCTTTAAAATTCCCCTCTTTTCTCTGTTTTATGTTCAAATCTTGCCTTCCTCTTCTCTTATTTTTTTGTTGATTGATTCGAATATTTGAGGAATGTGATTTTGATTTTAAAAGCGATGGAGATGAAACTAAGGAACCAAATGATGAGCGTCTTCCAAAGAAGATGCAACCATCATGCGGACCGAACAGCTTT

mRNA sequence

TCCATTCAGCCGCTGGTCCAGCACCTGAAGCCTAGACCCTTCGTCTGTTCACCAGCGTTCACAGCAACGTTCTCCGTTCAGGTTCGCCGGAAGCCCGAAAGCGTTTCCCCTGAGAAGCTCCCGAAAGCGATGGAGATGATTAAGGAACCAAATGATGAGCGTCTTCCAAAGAAGATCGATGGAGATGAAACTAAGGAACCAAATGATGAGCGTCTTCCAAAGAAGATGCAACCATCATGCGGACCGAACAGCTTT

Coding sequence (CDS)

TCCATTCAGCCGCTGGTCCAGCACCTGAAGCCTAGACCCTTCGTCTGTTCACCAGCGTTCACAGCAACGTTCTCCGTTCAGGTTCGCCGGAAGCCCGAAAGCGTTTCCCCTGAGAAGCTCCCGAAAGCGATGGAGATGATTAAGGAACCAAATGATGAGCGTCTTCCAAAGAAGATCGATGGAGATGAAACTAAGGAACCAAATGATGAGCGTCTTCCAAAGAAGATGCAACCATCATGCGGACCGAACAGCTTT

Protein sequence

SIQPLVQHLKPRPFVCSPAFTATFSVQVRRKPESVSPEKLPKAMEMIKEPNDERLPKKIDGDETKEPNDERLPKKMQPSCGPNSF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G005350.1Lsi06G005350.1mRNA