Homology
BLAST of Lsi05G021740 vs. ExPASy Swiss-Prot
Match:
Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)
HSP 1 Score: 578.6 bits (1490), Expect = 6.8e-164
Identity = 313/499 (62.73%), Postives = 393/499 (78.76%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDV-EEVSEEPQV--- 60
M+D + ++RVD EE +Y EM+D+VEE E+ + ++ ++DV + +EE +V
Sbjct: 1 MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60
Query: 61 ----GTNTED---KFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVF 120
G + ED + + D N+I IE+ ++ EK S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61 GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120
Query: 121 IGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHG 180
IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIE+LH
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180
Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNR 240
KE KGKTIRCSLS++K+RLFIGN+PK+WT+DEF+++IE VGPGVENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240
Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKNI 300
GFAFVLYYNNACADYSRQKM +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300
Query: 301 PENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIE 360
PENT+TEQLKELFQ+HGEVTK+ PPGK G KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360
Query: 361 GQLLEVVLAKPQSDKKSD-GAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFH 420
GQ LEVVLAKPQ+++K D +YS+ + P +H +GG+ PYG++G G G+ F
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420
Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGPTGR 480
QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM PP R RR++R+NGS G +GR
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480
Query: 481 SGGSSSGDEVNRGRRYRPY 483
S D GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495
BLAST of Lsi05G021740 vs. ExPASy Swiss-Prot
Match:
O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)
HSP 1 Score: 188.0 bits (476), Expect = 2.6e-46
Identity = 140/423 (33.10%), Postives = 214/423 (50.59%), Query Frame = 0
Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
P G+EVF+G + RD+ E++L L E G I+++R++ D SG+++GYAFI+F KEAAQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
+A++ E++ GK + +S + +RLF+G++PK+ T + E V G+ ++ L
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280
Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
P + +NRGF F+ Y ++ A +R+++ S K+ GN TV WADP PD A+V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F + G++ +V +D+AF+H+ +R +A+KA+
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSD---GAYSHISGSHPNHLLH--------------- 401
E EIEG+ +E+VLAKP K+ + + S ++ ++ H
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460
Query: 402 GGYGGYGGNP--------YGSLGGY---GVTAGFHQP--------MIYGRG--------- 461
GG GGYG P Y GY G+ P + GRG
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520
Query: 462 PMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRS-GGSSSGDEV 477
P P G P P GR GY Q G P+ P R R G GGP + G S G
Sbjct: 521 PPPRGRGAPP---PRGRAGY--SQRGAPLGPPRGSR----GGRGGPAQQQRGRGSRGSRG 566
BLAST of Lsi05G021740 vs. ExPASy Swiss-Prot
Match:
O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)
HSP 1 Score: 176.4 bits (446), Expect = 7.7e-43
Identity = 124/388 (31.96%), Postives = 199/388 (51.29%), Query Frame = 0
Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
P G+E+F+G + RD+ E++L L E G I+++R++ D +G ++GYAF++F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
+A++ + E++ GK I +S + +RLF+G++PKS T ++ E V G+ ++ L
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277
Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
P + +NRGF F+ Y ++ A +R+++ S K+ GN TV WADP PD A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F Q G++ +V +D+AFIH+ ER A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYGGYG---------GN 401
E ++EG+ +E+V AKP K+ + + + ++ Y YG G
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457
Query: 402 PYGSLGGYGVT------AGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPP 461
G GGYG ++ Y G + D GY Q G
Sbjct: 458 GRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYE-------DPYYGYEDFQVGARGRG 517
Query: 462 SRSRRS---ERSNGSGGPTGRSGGSSSG 471
R R R G+ P GR+G S G
Sbjct: 518 GRGARGAAPSRGRGAAPPRGRAGYSQRG 527
BLAST of Lsi05G021740 vs. ExPASy Swiss-Prot
Match:
Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)
HSP 1 Score: 176.0 bits (445), Expect = 1.0e-42
Identity = 124/388 (31.96%), Postives = 199/388 (51.29%), Query Frame = 0
Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
P G+E+F+G + RD+ E++L L E G I+++R++ D +G ++GYAF++F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
+A++ + E++ GK I +S + +RLF+G++PKS T ++ E V G+ ++ L
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277
Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
P + +NRGF F+ Y ++ A +R+++ S K+ GN TV WADP PD A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F Q G++ +V +D+AFIH+ ER A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYGGYG---------GN 401
E ++EG+ +E+V AKP K+ + + + ++ Y YG G
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457
Query: 402 PYGSLGGYGVT------AGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPP 461
G GGYG ++ Y G + D GY Q G
Sbjct: 458 GRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYE-------DPYYGYEDFQVGARGRG 517
Query: 462 SRSRRS---ERSNGSGGPTGRSGGSSSG 471
R R R G+ P GR+G S G
Sbjct: 518 GRGARGAAPSRGRGAAPPRGRAGYSQRG 527
BLAST of Lsi05G021740 vs. ExPASy Swiss-Prot
Match:
Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 1.0e-42
Identity = 124/388 (31.96%), Postives = 199/388 (51.29%), Query Frame = 0
Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
P G+E+F+G + RD+ E++L L E G I+++R++ D +G ++GYAF++F TKEAAQ
Sbjct: 68 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
+A++ + E++ GK I +S + +RLF+G++PKS T ++ E V G+ ++ L
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187
Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
P + +NRGF F+ Y ++ A +R+++ S K+ GN TV WADP PD A+V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F Q G++ +V +D+AFIH+ ER A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYGGYG---------GN 401
E ++EG+ +E+V AKP K+ + + + ++ Y YG G
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 367
Query: 402 PYGSLGGYGVT------AGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPP 461
G GGYG ++ Y G + D GY Q G
Sbjct: 368 GRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYE-------DPYYGYEDFQVGARGRG 427
Query: 462 SRSRRS---ERSNGSGGPTGRSGGSSSG 471
R R R G+ P GR+G S G
Sbjct: 428 GRGARGAAPSRGRGAAPPRGRAGYSQRG 437
BLAST of Lsi05G021740 vs. ExPASy TrEMBL
Match:
A0A1S3AUX7 (heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)
HSP 1 Score: 909.1 bits (2348), Expect = 8.1e-261
Identity = 462/482 (95.85%), Postives = 476/482 (98.76%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFSGDGRNN+S+ESIENREKSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
SDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYR 480
QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
Query: 481 PY 483
PY
Sbjct: 481 PY 482
BLAST of Lsi05G021740 vs. ExPASy TrEMBL
Match:
A0A1S3AUK8 (heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)
HSP 1 Score: 904.4 bits (2336), Expect = 2.0e-259
Identity = 462/483 (95.65%), Postives = 476/483 (98.55%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFSGDGRNN+S+ESIENREKSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
SLSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
QSDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420
Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480
Query: 481 RPY 483
RPY
Sbjct: 481 RPY 483
BLAST of Lsi05G021740 vs. ExPASy TrEMBL
Match:
A0A5D3DB75 (Heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00650 PE=4 SV=1)
HSP 1 Score: 899.0 bits (2322), Expect = 8.3e-258
Identity = 458/480 (95.42%), Postives = 473/480 (98.54%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFSGDGRNN+S+ESIENREKSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
SDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYR 480
QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRR +
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRVK 480
BLAST of Lsi05G021740 vs. ExPASy TrEMBL
Match:
A0A5A7TZ47 (Heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00660 PE=4 SV=1)
HSP 1 Score: 894.4 bits (2310), Expect = 2.1e-256
Identity = 458/481 (95.22%), Postives = 473/481 (98.34%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFSGDGRNN+S+ESIENREKSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
SLSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
QSDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420
Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRR
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRV 480
BLAST of Lsi05G021740 vs. ExPASy TrEMBL
Match:
A0A6J1FDC4 (heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444327 PE=4 SV=1)
HSP 1 Score: 892.9 bits (2306), Expect = 6.0e-256
Identity = 458/482 (95.02%), Postives = 466/482 (96.68%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRR GE PEEDVEEVSEE Q TNT
Sbjct: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQAETNT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFS DGRNNISIESIENR+KSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDV EE
Sbjct: 61 EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIE+LHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LSDSKHRLFIGNVPKSWT+DEFK LIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
CADYSRQKMSS NFKLDGNSPTVSWADPKS PDNSAA+QVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSTNFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHG+VTKVNMPPGKAG SKRDFAFIHYAERSSALKAVKETEKYEIEGQ+LEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
SDKK DGAYSHISGSHPNHLLH GYG YGG+PYGSLGGYGVTAG HQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYR 480
QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERS+GSGGPT RSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
Query: 481 PY 483
PY
Sbjct: 481 PY 482
BLAST of Lsi05G021740 vs. NCBI nr
Match:
XP_038903519.1 (heterogeneous nuclear ribonucleoprotein Q isoform X2 [Benincasa hispida])
HSP 1 Score: 918.7 bits (2373), Expect = 2.1e-263
Identity = 467/482 (96.89%), Postives = 479/482 (99.38%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE+PEEDVEEV EEPQVGT+T
Sbjct: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVGEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
ED+FSGDGRN+ISIESIENREKSASLLDEDDLEKHA+LLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDRFSGDGRNSISIESIENREKSASLLDEDDLEKHAELLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISF+TKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFRTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LSDSKHRLFIGNVPKSWTDDEFK LIEG+GPGVENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFKALIEGIGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENT+TEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTSTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
SDKKSDGAYS++SGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQP+IYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSYMSGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYR 480
QMVPMVLPDGRIGYV QQPGVPMPPSRSRRSER+NGSGGPTGRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVFQQPGVPMPPSRSRRSERNNGSGGPTGRSGGSSSGDEVNRGRRYR 480
Query: 481 PY 483
PY
Sbjct: 481 PY 482
BLAST of Lsi05G021740 vs. NCBI nr
Match:
XP_038903503.1 (heterogeneous nuclear ribonucleoprotein Q isoform X1 [Benincasa hispida] >XP_038903511.1 heterogeneous nuclear ribonucleoprotein Q isoform X1 [Benincasa hispida])
HSP 1 Score: 914.1 bits (2361), Expect = 5.2e-262
Identity = 467/483 (96.69%), Postives = 479/483 (99.17%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE+PEEDVEEV EEPQVGT+T
Sbjct: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVGEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
ED+FSGDGRN+ISIESIENREKSASLLDEDDLEKHA+LLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDRFSGDGRNSISIESIENREKSASLLDEDDLEKHAELLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISF+TKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFRTKEAAQKAIEDLHGKEVKVGKTIRC 180
Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
SLSDSKHRLFIGNVPKSWTDDEFK LIEG+GPGVENIELIKDPQNPSRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFKALIEGIGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENT+TEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTSTEQLKE 300
Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
QSDKKSDGAYS++SGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQP+IYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSYMSGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPVIYGRGPMPAG 420
Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
MQMVPMVLPDGRIGYV QQPGVPMPPSRSRRSER+NGSGGPTGRSGGSSSGDEVNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVFQQPGVPMPPSRSRRSERNNGSGGPTGRSGGSSSGDEVNRGRRY 480
Query: 481 RPY 483
RPY
Sbjct: 481 RPY 483
BLAST of Lsi05G021740 vs. NCBI nr
Match:
XP_008437831.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo])
HSP 1 Score: 909.1 bits (2348), Expect = 1.7e-260
Identity = 462/482 (95.85%), Postives = 476/482 (98.76%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFSGDGRNN+S+ESIENREKSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
SDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYR 480
QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
Query: 481 PY 483
PY
Sbjct: 481 PY 482
BLAST of Lsi05G021740 vs. NCBI nr
Match:
XP_004133787.1 (heterogeneous nuclear ribonucleoprotein Q isoform X2 [Cucumis sativus] >KAE8650219.1 hypothetical protein Csa_010271 [Cucumis sativus])
HSP 1 Score: 905.6 bits (2339), Expect = 1.8e-259
Identity = 464/482 (96.27%), Postives = 475/482 (98.55%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFS D RNN+S+ESIENREKS+SLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFS-DDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRD+CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
SDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYR 480
QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
Query: 481 PY 483
PY
Sbjct: 481 PY 481
BLAST of Lsi05G021740 vs. NCBI nr
Match:
XP_008437829.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo] >XP_008437830.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo])
HSP 1 Score: 904.4 bits (2336), Expect = 4.1e-259
Identity = 462/483 (95.65%), Postives = 476/483 (98.55%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFSGDGRNN+S+ESIENREKSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
SLSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
QSDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420
Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480
Query: 481 RPY 483
RPY
Sbjct: 481 RPY 483
BLAST of Lsi05G021740 vs. TAIR 10
Match:
AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 578.6 bits (1490), Expect = 4.8e-165
Identity = 313/499 (62.73%), Postives = 393/499 (78.76%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDV-EEVSEEPQV--- 60
M+D + ++RVD EE +Y EM+D+VEE E+ + ++ ++DV + +EE +V
Sbjct: 1 MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60
Query: 61 ----GTNTED---KFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVF 120
G + ED + + D N+I IE+ ++ EK S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61 GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120
Query: 121 IGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHG 180
IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIE+LH
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180
Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNR 240
KE KGKTIRCSLS++K+RLFIGN+PK+WT+DEF+++IE VGPGVENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240
Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKNI 300
GFAFVLYYNNACADYSRQKM +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300
Query: 301 PENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIE 360
PENT+TEQLKELFQ+HGEVTK+ PPGK G KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360
Query: 361 GQLLEVVLAKPQSDKKSD-GAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFH 420
GQ LEVVLAKPQ+++K D +YS+ + P +H +GG+ PYG++G G G+ F
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420
Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGPTGR 480
QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM PP R RR++R+NGS G +GR
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480
Query: 481 SGGSSSGDEVNRGRRYRPY 483
S D GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495
BLAST of Lsi05G021740 vs. TAIR 10
Match:
AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 578.6 bits (1490), Expect = 4.8e-165
Identity = 313/499 (62.73%), Postives = 393/499 (78.76%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDV-EEVSEEPQV--- 60
M+D + ++RVD EE +Y EM+D+VEE E+ + ++ ++DV + +EE +V
Sbjct: 1 MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60
Query: 61 ----GTNTED---KFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVF 120
G + ED + + D N+I IE+ ++ EK S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61 GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120
Query: 121 IGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHG 180
IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIE+LH
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180
Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNR 240
KE KGKTIRCSLS++K+RLFIGN+PK+WT+DEF+++IE VGPGVENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240
Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKNI 300
GFAFVLYYNNACADYSRQKM +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300
Query: 301 PENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIE 360
PENT+TEQLKELFQ+HGEVTK+ PPGK G KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360
Query: 361 GQLLEVVLAKPQSDKKSD-GAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFH 420
GQ LEVVLAKPQ+++K D +YS+ + P +H +GG+ PYG++G G G+ F
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420
Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGPTGR 480
QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM PP R RR++R+NGS G +GR
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480
Query: 481 SGGSSSGDEVNRGRRYRPY 483
S D GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495
BLAST of Lsi05G021740 vs. TAIR 10
Match:
AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 558.1 bits (1437), Expect = 6.7e-159
Identity = 309/500 (61.80%), Postives = 387/500 (77.40%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDV-EEVSEEPQV--- 60
M+D + ++RVD EE +Y EM+D+VEE E+ + ++ ++DV + +EE +V
Sbjct: 1 MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60
Query: 61 ----GTNTED---KFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVF 120
G + ED + + D N+I IE+ ++ EK S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61 GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120
Query: 121 IGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHG 180
IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIE+LH
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180
Query: 181 KEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRN 240
KE K T CSLS S +RLFIGN+PK+WT+DEF+++IE VGPGVENIELIKDP N +RN
Sbjct: 181 KEFKASSTANCSLSLS-NRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRN 240
Query: 241 RGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKN 300
RGFAFVLYYNNACADYSRQKM +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKN
Sbjct: 241 RGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 300
Query: 301 IPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEI 360
IPENT+TEQLKELFQ+HGEVTK+ PPGK G KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 IPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEV 360
Query: 361 EGQLLEVVLAKPQSDKKSD-GAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGF 420
GQ LEVVLAKPQ+++K D +YS+ + P +H +GG+ PYG++G G G+ F
Sbjct: 361 NGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSF 420
Query: 421 HQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGPTG 480
QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM PP R RR++R+NGS G +G
Sbjct: 421 SQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSG 480
Query: 481 RSGGSSSGDEVNRGRRYRPY 483
R S D GRRYRPY
Sbjct: 481 RD-NSHEHDGNRGGRRYRPY 495
BLAST of Lsi05G021740 vs. TAIR 10
Match:
AT4G00830.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 548.9 bits (1413), Expect = 4.1e-156
Identity = 299/488 (61.27%), Postives = 370/488 (75.82%), Query Frame = 0
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
M D E E+ + EE+ ++ DDDV E+ G+ D+E+V EE
Sbjct: 1 MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGGDMEDVQEE------- 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
+ D N+I IE+ ++ EK S +D++D EK++ LL+LPPHGSEVFIGGL RDV EE
Sbjct: 61 ---IAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIE+LH KE KGKTIRCS
Sbjct: 121 DLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LS++K+RLFIGN+PK+WT+DEF+++IE VGPG DP N +RNRGFAFVLYYNNA
Sbjct: 181 LSETKNRLFIGNIPKNWTEDEFRKVIEDVGPG--------DPTNTTRNRGFAFVLYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKNIPENTTTEQLKE 300
CADYSRQKM +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKNIPENT+TEQLKE
Sbjct: 241 CADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKE 300
Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
LFQ+HGEVTK+ PPGK G KRDF F+HYAERSSALKAVK+TE+YE+ GQ LEVVLAKP
Sbjct: 301 LFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKP 360
Query: 361 QSDKKSD-GAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMP 420
Q+++K D +YS+ + P +H +GG+ PYG++G G G+ F QPMIYGRG MP
Sbjct: 361 QAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIYGRGAMP 420
Query: 421 AGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGPTGRSGGSSSGDEVN 480
GMQMVPM+LPDGR+GYVLQQPG+PM PP R RR++R+NGS G +GR S D
Sbjct: 421 TGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRD-NSHEHDGNR 467
Query: 481 RGRRYRPY 483
GRRYRPY
Sbjct: 481 GGRRYRPY 467
BLAST of Lsi05G021740 vs. TAIR 10
Match:
AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 398.3 bits (1022), Expect = 8.9e-111
Identity = 217/485 (44.74%), Postives = 323/485 (66.60%), Query Frame = 0
Query: 3 DGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNTED 62
D E EERVDL+ DN EE+ +EE V+ + V+ EE++EE+ EE +
Sbjct: 13 DSMESEERVDLDGDNDPEEI---LEEEVEYEEVE-------EEEIEEIEEEIE------- 72
Query: 63 KFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEEDL 122
+ +E E E + + +E++ ++H +LLALPPHGSEV++GG+ D E DL
Sbjct: 73 -------EEVEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 132
Query: 123 RDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCSLS 182
+ C S+GE+ E+RI++++DSG+ KGYAF++F++K+ A +AI+ L+ + +GK I+CS +
Sbjct: 133 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTT 192
Query: 183 DSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACA 242
+KHRLF+GNVP++W + + K+ +GPGV+ +EL K+PQN RNRGFAF+ YYN+ACA
Sbjct: 193 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 252
Query: 243 DYSRQKMSSANFKLDGNSPTVSWADPKS-MPDNSAAAQVKALYVKNIPENTTTEQLKELF 302
+YS+QKMS+ +FKLD N+PTVSWA+ +S +S+A+QVKALY+KN+P + T E+LK LF
Sbjct: 253 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 312
Query: 303 QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQS 362
+ HG++ KV +PP K G + F+HYAER+S ++A+K TE+YEI+G +L+ LAKPQ+
Sbjct: 313 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 372
Query: 363 DKKSD-GAYSHISGS--HPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPA 422
D+K++ ++ S PN+ Y G +P+G+LGG+G +A + QP+++ G
Sbjct: 373 DQKTNTNTVQNVQKSQLQPNYPPLLSY-GMAPSPFGALGGFGASA-YSQPLMHAGGHAAG 432
Query: 423 GMQMVPMVLPDGRIGYVLQQPGV-PMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGR 482
GM M+P++LPDGRIGYVLQQPG+ MP R S G G + SG S D
Sbjct: 433 GMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRS 471
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9ASP6 | 6.8e-164 | 62.73 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF... | [more] |
O43390 | 2.6e-46 | 33.10 | Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1... | [more] |
O60506 | 7.7e-43 | 31.96 | Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=... | [more] |
Q7TMK9 | 1.0e-42 | 31.96 | Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE... | [more] |
Q7TP47 | 1.0e-42 | 31.96 | Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3AUX7 | 8.1e-261 | 95.85 | heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=... | [more] |
A0A1S3AUK8 | 2.0e-259 | 95.65 | heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=... | [more] |
A0A5D3DB75 | 8.3e-258 | 95.42 | Heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo var. makuwa... | [more] |
A0A5A7TZ47 | 2.1e-256 | 95.22 | Heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo var. makuwa... | [more] |
A0A6J1FDC4 | 6.0e-256 | 95.02 | heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita moschata ... | [more] |
Match Name | E-value | Identity | Description | |
XP_038903519.1 | 2.1e-263 | 96.89 | heterogeneous nuclear ribonucleoprotein Q isoform X2 [Benincasa hispida] | [more] |
XP_038903503.1 | 5.2e-262 | 96.69 | heterogeneous nuclear ribonucleoprotein Q isoform X1 [Benincasa hispida] >XP_038... | [more] |
XP_008437831.1 | 1.7e-260 | 95.85 | PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo] | [more] |
XP_004133787.1 | 1.8e-259 | 96.27 | heterogeneous nuclear ribonucleoprotein Q isoform X2 [Cucumis sativus] >KAE86502... | [more] |
XP_008437829.1 | 4.1e-259 | 95.65 | PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo] >... | [more] |
Match Name | E-value | Identity | Description | |
AT4G00830.1 | 4.8e-165 | 62.73 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G00830.2 | 4.8e-165 | 62.73 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G00830.4 | 6.7e-159 | 61.80 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G00830.3 | 4.1e-156 | 61.27 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT3G52660.1 | 8.9e-111 | 44.74 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |