Lsi05G011050 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G011050
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein FAM98A-like isoform X1
Location	chr05: 18807326 .. 18810245 (+)
RNA-Seq Expression	Lsi05G011050
Synteny	Lsi05G011050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTGTTAAAAAGTCCGTATTTTGAAATCTTTCACAAAAGAAAAAGAAAACCTTCCTGAGAGAGGTTTTAGGTTCTTCTCAAGAGATACAGTTAACAAATTCCTCTGTGGCCCGTTAGGGTTTCTGATTTTTATCTCATCATCGTCACTCTCCCTCCTCTATCGCTTTCCCGTCAACTACGACGCCATGGATAGATACCAGAAGGTCGAGAAGCCCAAACCCGAATCACCCATTAACGAAAATGAGATCCGAATCACTAGTCAAGGCGCCATTCGTAACTACATCACCTATGCTTCTACACTTCTTCAGGTTTATCTTCTCTTCATTCAATCTCTTTTCTCCTTCATTTCCATCTGCTTATCGGAGTTCCGCCTGCTGATTTTCTAGCAATGCTGTGTCTGTTCTGTAGTTTTGGGGGTGAGTCTGTTTGAACTTTCGTGTTTTATTTTTTCTGTTTTTGTTAATTTGGAACAGTCTTGATGTTTATCGATTTGGGTATTTCTCATTGGATGATTTTGTGATTGTATTGATATGTTAATGATGACTAGTTTGATATATTTTTTTTTCTTTCCACGTTTTATAGGTCAATTAGTTTCATTGGATGTGCATGCTGTTTTTATAAGAACAAATATTTGAATGAAAAAGATGAAACATATTGAAGGATTCCAAGGAGATAACAAACACACTCTAATGGGAGACTGACTATAAAACTCATGGAACTAGACCTCTGTAGAGAAGTAACAAAAACATTAGTCCCCAAGCTCTATGTTTAAGGTTTAAACATAAGTTATTTTTAAATTTAATTTAATTTAATTATATTTATAATGTGTCTACTACTTTGATTGTCCTACTGTGAACTGTCATCTGTTTTAAAGATAGATGACTTTAGCTTTAATGCCTTGGTGCACCTTCTTCTTGTTATTCTTCTGATTTTTATCTTATTTCTTGTTGCTTTGAGTATGTTGTTTGATAAATTTTCTATAGTATTTTGGTTATCACTAAAACCGTATTACATAGAATATTGTTGTTCTTGGAACTTATTCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGACAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTGAAGGTTTATTTTCTTTTAGAATCTGTGTGCCTTTGAGTGCAAATATTGTGTATTTCATAATTGATAAGCCATGTGTATCCCCAAAACAGAAGAGAATATCACGGTTGCATCAAGAAACAGCTATCAGCTCAGTTAGCATAACTGACGTATGGGAGCCCATTGAAGAGGGTCTTGTACCGTAAGTTTTCTTAGTCTGTGCATTCAAATTTCAAGGCTAATTGTATAATAAAGAATTGAGAGCCTATTTTTGTTTTATTTGATTTGCACTCACTCTATATACATCGCTCACAACTTTGTTGAGTGTTCTATGGGTTTGTAGTATGTAGTCTAGTACTTTCAATGTGCAAGAAATAACTTCTAACATGTCACACAGGGTGGAGATGACTCGTCATGTCTCAATGATTTCAATTACCTTGTCCAATCGAGAGCTAAATAAAAATTCTCCGGGGTAAGATATTTTGGAAGCTTTACAATTTGGTATAAGATGTGGGATTTAGCTGCTTTTCTTGCATATTTCATGCTTTGGTTTCTTCTGCATGTATGATGATGGAATAACTTCTGTGTGTAGGTATCAAGCTCCACACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAGCAGCCGCTGCCACAACAGCAACCACCCAGACAACCACGCATTTATCACAATGCTGTTAGTGAAGGTGATATTAGCAACACTTCATTATTGGATTATGGAACACTACCTTACTTTGTATGGGTTTTGACATATTTCTGGCACTTTTGCAGATCCATATAGCCAAGGAAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGGAACTACCAAGGTGGATACGGCAACTACCAAGGTGGATATGGTCAATACCAAGGTGGTTATGGCCACTACCAAGGTGGATCTGATAACTACCAAGGTGGACCTGGATATTATCAAGGTGAATATGGAACTGTCGAATATTTTCGATAGAAGTAATGCTTTAGGGTTGACTGTATTGCATTTGACTTCATATTGTTCTTGAGTGCGATTTCTAACTCTTGTGAGATTTCTTCATCATAGATAATGGTGGATACTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCTGGGCCTACCGTGGTAAGTTTCTTTCTTAACTTTCTCCATGCATCACAAAAATACAAGCCAAGTCTATCTCCGAGTTGACTGTAGAAATGTTTTGAATATAAATGCAACACGGTCGAGTCTTGAAATGCATCGACTTATTGATTTTTCTTCAAAGTTATAACTAGTAATTTAGGGTGGTTTATGTAGCTCTTTAGACGTCTGATCATGTAATGTTTGCAAAATGCTCTTGTGGGAACAAGGCGTTTCAAGCAACTATTATCCTCCTGCAGGAGCTGGATATGAAAGAGGCAGAGGGGGTAGAGGTTATGGCCGTGGACGGGGGCGAATGGGTGGTCGCACAAGGGGTGGCGGAGGAAACCAGGCTTAGACGAAATCAAAACGTATTCGTTTGTTCTTCCTACCTCTTGATTGAGCTATAAATGCTTTGCCTTGGCCAGTGGGATGAATTATCACATATTTGTTTTAATAGCTTGAAATTCAGTTTTTACAATTTCCAGCGTTTTTAGGCAGTGTCTTTTTTTTTTTCCTTTTTTTTTTCTTTTCTTTTCAGATAATATGGGGAATGCAGCATTGTATTTGTGGGGCAAGGTTGCTTTTTTGGTTCCATGTTTTTGCATTTAGCTTAAGGCCAATCAGTTTATTGTTTGCCATTAATGTAATTCGTTTTACCCA

mRNA sequence

GATTGTTAAAAAGTCCGTATTTTGAAATCTTTCACAAAAGAAAAAGAAAACCTTCCTGAGAGAGGTTTTAGGTTCTTCTCAAGAGATACAGTTAACAAATTCCTCTGTGGCCCGTTAGGGTTTCTGATTTTTATCTCATCATCGTCACTCTCCCTCCTCTATCGCTTTCCCGTCAACTACGACGCCATGGATAGATACCAGAAGGTCGAGAAGCCCAAACCCGAATCACCCATTAACGAAAATGAGATCCGAATCACTAGTCAAGGCGCCATTCGTAACTACATCACCTATGCTTCTACACTTCTTCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGACAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTGAAGAAGAGAATATCACGGTTGCATCAAGAAACAGCTATCAGCTCAGTTAGCATAACTGACGTATGGGAGCCCATTGAAGAGGGTCTTGTACCGGTGGAGATGACTCGTCATGTCTCAATGATTTCAATTACCTTGTCCAATCGAGAGCTAAATAAAAATTCTCCGGGGTATCAAGCTCCACACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAGCAGCCGCTGCCACAACAGCAACCACCCAGACAACCACGCATTTATCACAATGCTGTTAGTGAAGATCCATATAGCCAAGGAAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGGAACTACCAAGGTGGATACGGCAACTACCAAGGTGGATATGGTCAATACCAAGGTGGTTATGGCCACTACCAAGGTGGATCTGATAACTACCAAGGTGGACCTGGATATTATCAAGATAATGGTGGATACTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCTGGGCCTACCGTGGCGTTTCAAGCAACTATTATCCTCCTGCAGGAGCTGGATATGAAAGAGGCAGAGGGGGTAGAGGTTATGGCCGTGGACGGGGGCGAATGGGTGGTCGCACAAGGGGTGGCGGAGGAAACCAGGCTTAGACGAAATCAAAACGTATTCGTTTGTTCTTCCTACCTCTTGATTGAGCTATAAATGCTTTGCCTTGGCCAGTGGGATGAATTATCACATATTTGTTTTAATAGCTTGAAATTCAGTTTTTACAATTTCCAGCGTTTTTAGGCAGTGTCTTTTTTTTTTTCCTTTTTTTTTTCTTTTCTTTTCAGATAATATGGGGAATGCAGCATTGTATTTGTGGGGCAAGGTTGCTTTTTTGGTTCCATGTTTTTGCATTTAGCTTAAGGCCAATCAGTTTATTGTTTGCCATTAATGTAATTCGTTTTACCCA

Coding sequence (CDS)

ATGGATAGATACCAGAAGGTCGAGAAGCCCAAACCCGAATCACCCATTAACGAAAATGAGATCCGAATCACTAGTCAAGGCGCCATTCGTAACTACATCACCTATGCTTCTACACTTCTTCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGACAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTGAAGAAGAGAATATCACGGTTGCATCAAGAAACAGCTATCAGCTCAGTTAGCATAACTGACGTATGGGAGCCCATTGAAGAGGGTCTTGTACCGGTGGAGATGACTCGTCATGTCTCAATGATTTCAATTACCTTGTCCAATCGAGAGCTAAATAAAAATTCTCCGGGGTATCAAGCTCCACACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAGCAGCCGCTGCCACAACAGCAACCACCCAGACAACCACGCATTTATCACAATGCTGTTAGTGAAGATCCATATAGCCAAGGAAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGGAACTACCAAGGTGGATACGGCAACTACCAAGGTGGATATGGTCAATACCAAGGTGGTTATGGCCACTACCAAGGTGGATCTGATAACTACCAAGGTGGACCTGGATATTATCAAGATAATGGTGGATACTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCTGGGCCTACCGTGGCGTTTCAAGCAACTATTATCCTCCTGCAGGAGCTGGATATGAAAGAGGCAGAGGGGGTAGAGGTTATGGCCGTGGACGGGGGCGAATGGGTGGTCGCACAAGGGGTGGCGGAGGAAACCAGGCTTAG

Protein sequence

MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKAVAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKNSPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSEDPYSQGRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGWAYRGVSSNYYPPAGAGYERGRGGRGYGRGRGRMGGRTRGGGGNQA

Homology

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BLAST of Lsi05G011050 vs. ExPASy Swiss-Prot
Match: Q8N5L8 (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11
Identity = 46/136 (33.82%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 1   MDRYQK-------VEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAM 60
           M+ Y+K          P P+ P +  E+R+     IRN +  A   L+    R +V    
Sbjct: 1   MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60

Query: 61  GQAISKAVAIAEILKKRISRLHQETAISSVSITDVWEPI--EEGLVPVEMTRHVSMISIT 120
           G+A  KAV+ AEI+K+R+  LHQ T +  +   D W P   + GL P+ + RHV  + + 
Sbjct: 61  GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVL 120

Query: 121 LSNRELNKNSPGYQAP 128
           LS   L+ N  GYQ P
Sbjct: 121 LSRDPLDPNECGYQPP 136

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BLAST of Lsi05G011050 vs. ExPASy Swiss-Prot
Match: Q99JH1 (Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp25l PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.6e-11
Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 0


Query: 10  PKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKAVAIAEILKK 69
           P P+ P +  E+R+     IRN +  A   L+    R +V    G+A  KAV+ AEI+K+
Sbjct: 17  PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGSGRAAGKAVSCAEIVKR 76

Query: 70  RISRLHQETAISSVSITDVWEPI--EEGLVPVEMTRHVSMISITLSNRELNKNSPGYQAP 128
           R+  LHQ T +  +   D W P   + GL P+ + RHV  + + LS   L+ +  GYQ P
Sbjct: 77  RVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPSECGYQPP 136

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BLAST of Lsi05G011050 vs. ExPASy Swiss-Prot
Match: Q9SL15 (Glycine-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=GRP3 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05
Identity = 45/88 (51.14%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 159 VSEDPYSQGRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGP 218
           V  D    G   G     G  +GG GNYQGG GNYQGG G YQGG G YQGG   YQGG 
Sbjct: 37  VKPDQRGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGGGGRYQGGG 96

Query: 219 GYYQDNGGYSNWGRGGGR--SRGWAYRG 245
           G YQ  GG    G  GG     G  YRG
Sbjct: 97  GRYQGGGGRQGGGGSGGSYCRHGCCYRG 124

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BLAST of Lsi05G011050 vs. ExPASy TrEMBL
Match: A0A5A7UHR2 (Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G00070 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.1e-143
Identity = 277/286 (96.85%), Postives = 279/286 (97.55%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSN ELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNGELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSEDPYSQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQ  PPRQPR+YHNAV+ED Y QGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDLYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240
           GGYGNYQGGYGNYQGGYG YQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240

Query: 241 AYRGVSSNYYPPAGAGYERGR-GGRGYGRGRGRMGGRTRGGGGNQA 286
           AYRGVSSNYYPPAGAGYERGR GGRGYGRGRGRMGGRTRGGGGNQA
Sbjct: 241 AYRGVSSNYYPPAGAGYERGRGGGRGYGRGRGRMGGRTRGGGGNQA 286

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BLAST of Lsi05G011050 vs. ExPASy TrEMBL
Match: A0A1S3CN30 (protein FAM98A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502782 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.1e-143
Identity = 277/286 (96.85%), Postives = 279/286 (97.55%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSN ELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNGELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSEDPYSQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQ  PPRQPR+YHNAV+ED Y QGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDLYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240
           GGYGNYQGGYGNYQGGYG YQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240

Query: 241 AYRGVSSNYYPPAGAGYERGR-GGRGYGRGRGRMGGRTRGGGGNQA 286
           AYRGVSSNYYPPAGAGYERGR GGRGYGRGRGRMGGRTRGGGGNQA
Sbjct: 241 AYRGVSSNYYPPAGAGYERGRGGGRGYGRGRGRMGGRTRGGGGNQA 286

[Close]

BLAST of Lsi05G011050 vs. ExPASy TrEMBL
Match: A0A1S3C001 (protein FAM98A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 5.3e-143
Identity = 276/286 (96.50%), Postives = 278/286 (97.20%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSEDPYSQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQ  PPRQPR+YHNAV+EDPY QGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240
           GGYGNYQGGYGNYQGGYG YQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240

Query: 241 AYRGVSSNYYPPAGAGYERGR-GGRGYGRGRGRMGGRTRGGGGNQA 286
           AYRGVSSNYYP AGAGYERGR GGRGYGRGRGRMGGR RG GGNQA
Sbjct: 241 AYRGVSSNYYPTAGAGYERGRGGGRGYGRGRGRMGGRARGSGGNQA 286

[Close]

BLAST of Lsi05G011050 vs. ExPASy TrEMBL
Match: A0A5D3DWB1 (Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00450 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.1e-139
Identity = 276/300 (92.00%), Postives = 278/300 (92.67%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSN ELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNGELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSEDPYSQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQ  PPRQPR+YHNAV+ED Y QGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDLYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240
           GGYGNYQGGYGNYQGGYG YQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240

Query: 241 AYRG--------------VSSNYYPPAGAGYERGR-GGRGYGRGRGRMGGRTRGGGGNQA 286
           AYR               VSSNYYPPAGAGYERGR GGRGYGRGRGRMGGRTRGGGGNQA
Sbjct: 241 AYRESGKALDSLIYLQSCVSSNYYPPAGAGYERGRGGGRGYGRGRGRMGGRTRGGGGNQA 300

[Close]

BLAST of Lsi05G011050 vs. ExPASy TrEMBL
Match: A0A6J1HGJ3 (keratin, type I cytoskeletal 9 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463892 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.1e-138
Identity = 272/291 (93.47%), Postives = 278/291 (95.53%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPE PI+ENEIRIT+QGAIRNYITYASTLLQEKRVR+IVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPELPISENEIRITTQGAIRNYITYASTLLQEKRVRDIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPL----PQQQPPRQPRIYHNAVSEDPYSQGRGRGRGRGR 180
           SPGYQAPHFVEQPKQQYNNQQ      PQQ PPRQPR+YHNAV+EDPY QGRGRGRGRGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQQQQQQPPQQPPPRQPRVYHNAVNEDPYGQGRGRGRGRGR 180

Query: 181 GWGRGGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGR 240
           GWGRGGYGNYQGGYGNYQGGYG YQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGR
Sbjct: 181 GWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGR 240

Query: 241 SRGWAYRGVSSNYYPPAGAGYERGR-GGRGYGRGRGRMGGRTR-GGGGNQA 286
           SRGWAYRGVSSNY+PPAGAGYERGR GGRGY RGRGRMGGRTR GGGGNQA
Sbjct: 241 SRGWAYRGVSSNYFPPAGAGYERGRGGGRGYSRGRGRMGGRTRGGGGGNQA 291

[Close]

BLAST of Lsi05G011050 vs. NCBI nr
Match: XP_038888001.1 (protein FAM98A-like isoform X2 [Benincasa hispida])

HSP 1 Score: 523.9 bits (1348), Expect = 8.9e-145
Identity = 279/285 (97.89%), Postives = 281/285 (98.60%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSEDPYSQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPR+YHNAV+EDPY QGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240
           GGYGNYQGGYGNYQGGYG YQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240

Query: 241 AYRGVSSNYYPPAGAGYERGR-GGRGYGRGRGRMGGRTRGGGGNQ 285
           AYRGVSSNYYPPAGAGYERGR GGRGYGRGRGRMGGRTRGGG NQ
Sbjct: 241 AYRGVSSNYYPPAGAGYERGRGGGRGYGRGRGRMGGRTRGGGVNQ 285

[Close]

BLAST of Lsi05G011050 vs. NCBI nr
Match: XP_038888000.1 (protein FAM98A-like isoform X1 [Benincasa hispida])

HSP 1 Score: 518.1 bits (1333), Expect = 4.9e-143
Identity = 279/289 (96.54%), Postives = 281/289 (97.23%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSE----DPYSQGRGRGRGRGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPR+YHNAV+E    DPY QGRGRGRGRGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRVYHNAVNEGTFADPYGQGRGRGRGRGR 180

Query: 181 GWGRGGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGR 240
           GWGRGGYGNYQGGYGNYQGGYG YQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGR
Sbjct: 181 GWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGR 240

Query: 241 SRGWAYRGVSSNYYPPAGAGYERGR-GGRGYGRGRGRMGGRTRGGGGNQ 285
           SRGWAYRGVSSNYYPPAGAGYERGR GGRGYGRGRGRMGGRTRGGG NQ
Sbjct: 241 SRGWAYRGVSSNYYPPAGAGYERGRGGGRGYGRGRGRMGGRTRGGGVNQ 289

[Close]

BLAST of Lsi05G011050 vs. NCBI nr
Match: XP_008465081.1 (PREDICTED: protein FAM98A-like isoform X1 [Cucumis melo] >KAA0054830.1 protein FAM98A-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 517.7 bits (1332), Expect = 6.4e-143
Identity = 277/286 (96.85%), Postives = 279/286 (97.55%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSN ELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNGELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSEDPYSQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQ  PPRQPR+YHNAV+ED Y QGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDLYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240
           GGYGNYQGGYGNYQGGYG YQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240

Query: 241 AYRGVSSNYYPPAGAGYERGR-GGRGYGRGRGRMGGRTRGGGGNQA 286
           AYRGVSSNYYPPAGAGYERGR GGRGYGRGRGRMGGRTRGGGGNQA
Sbjct: 241 AYRGVSSNYYPPAGAGYERGRGGGRGYGRGRGRMGGRTRGGGGNQA 286

[Close]

BLAST of Lsi05G011050 vs. NCBI nr
Match: XP_008454508.1 (PREDICTED: protein FAM98A-like isoform X1 [Cucumis melo])

HSP 1 Score: 516.9 bits (1330), Expect = 1.1e-142
Identity = 276/286 (96.50%), Postives = 278/286 (97.20%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSEDPYSQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQ  PPRQPR+YHNAV+EDPY QGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240
           GGYGNYQGGYGNYQGGYG YQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNWGRGGGRSRGW 240

Query: 241 AYRGVSSNYYPPAGAGYERGR-GGRGYGRGRGRMGGRTRGGGGNQA 286
           AYRGVSSNYYP AGAGYERGR GGRGYGRGRGRMGGR RG GGNQA
Sbjct: 241 AYRGVSSNYYPTAGAGYERGRGGGRGYGRGRGRMGGRARGSGGNQA 286

[Close]

BLAST of Lsi05G011050 vs. NCBI nr
Match: XP_031737653.1 (RNA-binding protein FUS isoform X1 [Cucumis sativus])

HSP 1 Score: 510.0 bits (1312), Expect = 1.3e-140
Identity = 275/287 (95.82%), Postives = 278/287 (96.86%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSEDPYSQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQ  PPRQPR+YHNAV+EDPY QGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQD-NGGYSNWGRGGGRSRG 240
            GYGNYQGGYGNYQGGYG YQGGYGHYQGGSDNYQGGPGYYQD NGGYS+WGRGGGRSRG
Sbjct: 181 SGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNNGGYSSWGRGGGRSRG 240

Query: 241 WAYRGVSSNYYPPAGAGYERGR-GGRGYGRGRGRMGGRTRGGGGNQA 286
           WAYRGVSSNYYP AGAGYERGR GGRGYGRGRGRMGGRTRG GGNQA
Sbjct: 241 WAYRGVSSNYYPTAGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 287

[Close]

BLAST of Lsi05G011050 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 192.6 bits (488), Expect = 4.4e-49
Identity = 178/411 (43.31%), Postives = 201/411 (48.91%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQ+V KPKPESPINENEIRITS+G IRNYI+YA++LLQEK V++IVLKAMGQAISK 
Sbjct: 1   MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAI+EILK +I  LHQ+ AISS+SITDVWEP EEGL PVE+TRHVSMISITLS  ELNK+
Sbjct: 61  VAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNKD 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSE------------------- 180
           SPGYQAP   +Q K QY       Q Q  RQ R+ +NA  E                   
Sbjct: 121 SPGYQAPAQSDQSKPQY-------QPQQGRQARLPYNAYGEEGEVVAEGEAGEEVDMETT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 KGVMKEKTKGTIKKIIKTMKVGIQTRAEAVDVVDEAMAIVGGRGGYGGGRDGGYGGGRDD 240

Query: 241 ---------------DPYSQGR--GRGRGRGRGWGRG---GYGNYQG------------G 285
                          D Y  GR  G G GR  G+G G   GYG  +G            G
Sbjct: 241 GYGERRNDGYGERRNDRYGGGRDDGYGGGRDDGYGGGRNDGYGGRRGGFRGGRGGGRDEG 300

[Close]

BLAST of Lsi05G011050 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-41
Identity = 160/337 (47.48%), Postives = 188/337 (55.79%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MD+YQ+V KPK ++PI+ NEIRITSQG  RNYITYA TLLQ+K   E+V KAMG+AI+K 
Sbjct: 1   MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           V I E++K+RI  LHQ T+I S  ITD WEP EEGL+P+E TRHVSMI+ITLS  ELN +
Sbjct: 61  VTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNTS 120

Query: 121 SPGYQAPHFVEQPKQ----QYNNQQPLPQQQPPRQPR-------------IYHNAVSED- 180
           S GYQ P  +E  K      Y  ++  P  +   + R              Y N   ED 
Sbjct: 121 SVGYQCPIPIELVKPMGDIDYEGREGSPGGRGRGRGRGRGRGRGRGGRGNAYVNVEHEDG 180

Query: 181 ------PYSQGRGRGRGR-GRGWGRGGYGN--------YQGGYG----------NYQGGY 240
                  Y +GRGRGRGR  RG GRGGY            GGYG          + +GGY
Sbjct: 181 GWEREQSYGRGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDGGYGYDAPHEHRGYDDRGGY 240

Query: 241 G---QYQGGYGHYQ--GGSDNYQGGPGY---YQDNGGYS--NWGRGG--GRSRG-WAYRG 282
               Q +GGY   Q  GG D  QG  GY    Q  GGY   + GRGG  G S+G   Y G
Sbjct: 241 DAPPQGRGGYDGPQGRGGYDGPQGRRGYDGPPQGRGGYDGPSQGRGGYDGPSQGRGGYDG 300

[Close]

BLAST of Lsi05G011050 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 165.2 bits (417), Expect = 7.5e-41
Identity = 145/316 (45.89%), Postives = 173/316 (54.75%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MD+YQ+VEKPK ++PI ENEIRITS G  RNYITYA  LLQE +  E++ KAMG+AI+K+
Sbjct: 1   MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           V I E++K+RI  LHQ T+I S  ITD WEP EEGL  +E TRHVSMI+ITLS  +LN +
Sbjct: 61  VTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNTS 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQQQPPRQPRIYHNAVSEDPYSQGRGRGR-GRGRGWG 180
           S GYQ P  +E  K       PL +        I +      P  +G  RGR GRGRG G
Sbjct: 121 SVGYQCPIPIEMVK-------PLAE--------IDYEGQDGSPRGRGGRRGRGGRGRGRG 180

Query: 181 RGGYGNYQGGYGNYQGGYGQYQGGYGHY-----QGGSDNYQGGPGY----YQDNGGYS-- 240
           RGG GN         GG G+   G G+       GG      G GY    Y D G     
Sbjct: 181 RGGRGNGPANVEYDDGGRGRGGRGNGYVNNEYDDGGRGRGGRGSGYVNNEYNDGGMEQDR 240

Query: 241 NWGRGGGRSRG--------WAYRGVSSNYY---------------PPAGAGYERGRGGRG 282
           ++GRG GR RG          Y G    YY               PPA  GY+ G   +G
Sbjct: 241 SYGRGRGRGRGGGRGGRGRGGYNGPPPPYYEAQQDGGDYGYNNVAPPADHGYD-GPPPQG 299

[Close]

BLAST of Lsi05G011050 vs. TAIR 10
Match: AT2G05520.1 (glycine-rich protein 3 )

HSP 1 Score: 50.8 bits (120), Expect = 2.1e-06
Identity = 45/88 (51.14%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 159 VSEDPYSQGRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGP 218
           V  D    G   G     G  +GG GNYQGG GNYQGG G YQGG G YQGG   YQGG 
Sbjct: 37  VKPDQRGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGGGGRYQGGG 96

Query: 219 GYYQDNGGYSNWGRGGGR--SRGWAYRG 245
           G YQ  GG    G  GG     G  YRG
Sbjct: 97  GRYQGGGGRQGGGGSGGSYCRHGCCYRG 124

[Close]

BLAST of Lsi05G011050 vs. TAIR 10
Match: AT2G05520.2 (glycine-rich protein 3 )

HSP 1 Score: 47.4 bits (111), Expect = 2.3e-05
Identity = 42/76 (55.26%), Postives = 42/76 (55.26%), Query Frame = 0


Query: 174 RGRGWGRGGY---GNYQGGYGNYQGGYGQYQGGYGHYQGGSDNYQGGPGYYQDNGGYSNW 233
           RG G   G Y   G YQGG GNYQGG G YQGG G YQGG   YQGG G YQ  GG    
Sbjct: 42  RGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGRYQGGGGRYQGGGGRYQGGGGRQGG 101

Query: 234 GRGGGR--SRGWAYRG 245
           G  GG     G  YRG
Sbjct: 102 GGSGGSYCRHGCCYRG 117

The following BLAST results are available for this feature:

BLAST of Lsi05G011050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8N5L8	1.6e-11	33.82	Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25...	[more]
Q99JH1	4.6e-11	35.00	Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp2...	[more]
Q9SL15	2.9e-05	51.14	Glycine-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=GRP3 PE=1 SV=1	[more]

BLAST of Lsi05G011050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHR2	3.1e-143	96.85	Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3CN30	3.1e-143	96.85	protein FAM98A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502782 PE=4 SV=1	[more]
A0A1S3C001	5.3e-143	96.50	protein FAM98A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1	[more]
A0A5D3DWB1	2.1e-139	92.00	Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1HGJ3	5.1e-138	93.47	keratin, type I cytoskeletal 9 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Lsi05G011050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888001.1	8.9e-145	97.89	protein FAM98A-like isoform X2 [Benincasa hispida]	[more]
XP_038888000.1	4.9e-143	96.54	protein FAM98A-like isoform X1 [Benincasa hispida]	[more]
XP_008465081.1	6.4e-143	96.85	PREDICTED: protein FAM98A-like isoform X1 [Cucumis melo] >KAA0054830.1 protein F...	[more]
XP_008454508.1	1.1e-142	96.50	PREDICTED: protein FAM98A-like isoform X1 [Cucumis melo]	[more]
XP_031737653.1	1.3e-140	95.82	RNA-binding protein FUS isoform X1 [Cucumis sativus]	[more]

BLAST of Lsi05G011050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07030.1	4.4e-49	43.31	Alba DNA/RNA-binding protein	[more]
AT1G76010.1	2.0e-41	47.48	Alba DNA/RNA-binding protein	[more]
AT1G20220.1	7.5e-41	45.89	Alba DNA/RNA-binding protein	[more]
AT2G05520.1	2.1e-06	51.14	glycine-rich protein 3	[more]
AT2G05520.2	2.3e-05	55.26	glycine-rich protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 19..80 e-value: 2.9E-17 score: 62.2
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 14..117 e-value: 8.9E-34 score: 117.4
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 16..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..285
None	No IPR available	PANTHER	PTHR13516	RIBONUCLEASE P SUBUNIT P25	coord: 1..284
None	No IPR available	PANTHER	PTHR13516:SF3	ALBA DNA/RNA-BINDING PROTEIN	coord: 1..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G011050.1	Lsi05G011050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding