Lsi05G010290 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G010290
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Adaptin ear-binding coat-associated protein, putative
Location	chr05: 17837101 .. 17842070 (+)
RNA-Seq Expression	Lsi05G010290
Synteny	Lsi05G010290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTATTTTGGGGATATCCAAAAAGGGCAAATGAGTAAATTGGGGTATGACAGTAGAGTTGACCTCTGTAGGACACCATTCTTCGAAGCCACGTCTCTGTTGTGCATCTTTTTCTGTTTCTGATGCTTTCTTCTCAAATCTCATCTTAATTCCTTCAATAAATTCAATTTTTTTGAAGAACCCATTTTCCCCAATTCCATTTCTTTGAAGAAATCTTCAAACTTTCTTCTCAATCAATCTCACATTCCGAGAAATCACCATGTCGTTTGAGGAGGATGAGGAGACCTTCGAGCACACTCTCCTTGTCGTTCGTGAGGTTTCCGTCTACAAAATCCCTCCTCGAACCACATCAGGCGGCTGTAAGTGCGGTGAGTGGCTACAATCCGACAAGATCTGGTCCGGCCGCCTTCGAGTTGTGTCCTGTAAGGACCGATGTGAGATCCGATTGGAAGATCCCAACTCCGGCGAACTCTTTGCTGCTTGTTTTGTTAATCCAGGTCAGCGAGAGAACTCCGTTGAGACCGTTCTTGACTCTTCTCGATACTTCGTTTTGAAGATCGAGGACGGCCGGGGTAAGCACGCTTTTGTAGGGTTAGGTTTTGCCGAACGAAATGAAGCTTTTGATTTCAATGTGGCATTGTCCGACCATGAGAAGTATGTTAAGAGAGATCTTGAGAAAGATCCGAGTAGTGGCGGTAGCAGCGGCGGCGATGCCAACGAAGAGAGCCAGATTGATATCCATCCTGCTGTGAATCACAGATTGAAGGTATAATTCCCCTGATTTTGATGGACTTCTGATGTTTAATCTGATGTGTTCTTGGCTATGAACTGATCTGATTAATGAATTCTCTGATCTAACTATTAGGAAAACGATTCATTCACATTGAGTAATATAGAATTACTCATTTGGCAGGCCAAGTCTCTGGCTGGAATAATGGTGTTGTAAGTTTTAAGTAGGTTACTCTTTTGCTTTGTTCATATACTTCCACTTTGTTAGGTCTTTTCTATTTTTCTGGATGTAGGCAGGTCTTCAATATTTTCAAGTTTGCTCGACGACTGTGATTTAGTAGCTTTTATCAAGAAAAAAAATGAAAGAATACAAAAGCATAAGAAAAAAAGAAAGCCCACAAGTAATCAAGCAAACTAATACCTAGCTAGTAATTACTACAATTTAGTAGCTTTAATTGAGAGAAGAATAAAAGGATACAAAGGCATACGACAAAAAGAAAGCCTACAACTAATCAAGCAAACTAATACCTAGCGAGTAATTACTGAAATTTAGAGCTTTCATTGAGAGAAGAATGGAAGGATACAAAAGCATACAACAAAAAGAAAGCCTACAACTAATACCTAGCGAGTAATTACAACGACTTAGTAGTTGGAAAACTAGAAACATTTTATATCGCCATTGTGATTGTGTTCTTTATGATGGGCTGAATGATAGGAAGGTGAAACAATTCGGATCAATGTGAAGCATAAGCCATCTAGTGGAACTGGTATGCTCTCAGCTGCTGGCTTGTCAGGGTCTGGTTCTGGAAAGCCAAAAACTCTGAGTCTTGCTCCACCACCAACTGGAGCTAGGAAAATCAGTTCTCCTCTTCCACCCCCTCCAAATGATCCTGCTGCGCGGAAGTTATCTGCCAGCACGTGCCGTGATGTCGATCGTGAAGGAAAAAATGACAATGTAAGCAACGCAAGCGACCCTTTATCAGATCTTTCCCAACTTGAGGTACAGTTTTTACTGTTTGTTCGTTACTTCGTTTTGTTATACCTGTGATACAGAGAAACATATTTGATGAGGATAATGTTATTCTTAAGTGACTAGTATAAATTGCCCCTATAGCTTACATATTATGGTTCTTCTCTCCTTTATGCACAACCCATTTAAATTTAGATTAGTTTTAGGAAACACATTAATAAGTTTGATTAGACTCAAGTATTGGTCTCTCCTTTGTGATTGGAATTGACTACTATCTTAGGCATTTGTGTTGAAGATTGCCCTTATAATTGCTAGGCCAACTTCAAGAATATTGCCTGGTGTAAGCTTATAGCTCAAGCGTTTGAAATATAAATCTGATAGTGATCCATATTCTTTAGATTCTCTTCTACATAGGTAGCTCGTATTTTCGTACGAGTGTATGTATCCTTAGGAACTCGTGTCGAGAAACAAGCTACCGCCATTTTAACTTGTGTTTGCATCACATTTGCAGAGAAATCTTCCTTCTGCTCCAGGTTCGACAAAGGCGGCAGCATCAGGATGGGCAGCATTCTGATCAGTGTAAGCTGGTGTTTGTTATTAAAAAAAAAAAAACCAAAAAACCAAGAAGTCTTAGTTTTATGTACTCTTCATTTTTTTGTTCATCTTGAGGGTGAAATGAGAGGGGAGGAAAAAAGGTGATGAAAGGGAAGTTATAAGTGATAATACCATATTGGAAAATAATCTTTGGAATACATATGTATACTCTAGTTATTTTCCTTATTGATCTTGAGTTCTCTCTTTAGCCTATTTTAATCCATTGCCTTGGGTTTCTGTACTTGTTTGGCTTAGTTTCATTTTGTAATTCAACTCATAGAAGAATGTCCTTATAAATTTGCATGCTTCATGTATATAATGAAAGGTGGTAGGCCTCACCGAGCCAATATACATTAAAATTGCCTTGGTAAAGGACAAATTTTAGGTTAAACAATAATTTTGACCGCTAAACGTGTTAATCTTTGAACTTTAATTTGTAATGAGTGAGTTTTTGAACTTTTTATTTGTAATATTTTAGGTCTCGTTTGGTAACTATTTGATTTTTTATTTTTGATTTTTTATTTTTGAAAATCAAGCCTATAAATACTCATTTCACTCCAAAATTTCTTGCTTTATTATATACTTTTTACTAATGTTTTAAAAACCAAACCAAATTTTGAATTTTTTCTTAAAAAAAATGTGTTCTTGAAAACTTGTTTTTGGTTTTGGTATTGAATAACCTTTGTACTTAAAGAAAGATGCAAATCATAGTATGAAATTGGGAGAAAATAGGCTTAGTTTTAAAAATAAAAAACCGAAAGTGAAATGGTTATCATACAGGGTTTTAATCTTGAAGCTAGCATGTAATAATTTAGTCTTTATCTTTTAAATTTGTAACAACTTAGTCTTTACCATGAGATCACCAAGATTAAGTGTTAAAGTCTTTAAAATTTATAAACAAATTTGATCTTTGATTAATCTATCTTTGTCAATCTATTTGTGTAAGAAATTCTATGAAATTTGAATACGAACTAAATCATTACTAATTATAAGGTAGAGAAACTAAATTCATACTTTTTTGTCACTTTAGTGAAAGTTTAAGAACGTTTAAGCTTTTTTTTAACATTATTCTAAGGATTAAATGATTTAACCAAAATTTTATATTAAAATAATGTAAAAGCTATCCGTAGAGTTAGTCAACTGTCACTTGTCTTCTGTTCGTACAACAAGTGATGATTTCATGTTAATATATTAATATCATTACTTAGACCTATCAAGATATTTGAGAGGTTTGTTGAGAGTGTAGTGGTTACAAGTTGAGTAAGTTAGAGTTAAAAGAGTGCAAACAATTTTTTTTTAAAAAAAAAGAAGTTATGTACCTACCTAAGAGTAAGATTGTTCAACAAATTTTCTTTTAACACCTAAATGTTACACGGTCAAACAAATTATCTAAATTAGTTATGGTACATGGTCAAACAAATTATCTAAATTAGTTATGGTACATTATTTATGGTTATTTCCTATTATAACTCTAGAATTTAGAAAAGTGCTCTAATATAAACTCTCTAATCCTAGAGACGTAGCTAACATGAATGAATGACAAAATATTTGCCAAAAGTCCACATAAAATAGTCAGGTTTCTAACATATCTGACGAATCAATACTTCGGGTTGTACTACAGATAAGTTATTCGCCGACTGAGAAGAACCGACACCGGCAGCTCTTACATTGTTTGAACTACTTGAAGGAGTTGATTGATGTTCAAGCCCAGTGCTGATTGCTCTTTCTTGGTTTCCTCGGATTTTAGCCAGCAGCTCTGCTGAAGATAAGGCCTTTCCACAAGATGTTCCAGCGGCATAGCCATTTAAATGGCTAGTTCCATTTCTAGATACTTCATCTGAGGATTTGGAATTGTTGTTTACTAGAGAGTTAACAGTTGAACCAAACTTCCGACCCACAGACGATGGTGCACCAGCAGTTCCAGCTTTTCCAGTCCATGTTGGAACTGAGATGCTCTCGTTACTTCGCAGCATTCTAGACTGGCGCAATGCCTCGGCTGCTCTACGTGCAACTTGAGAAGCTTGCTCCTCTAGCCGTATCTTCTCCCCATCATCCGCGTTAACAATGATATCATGATTAACAACGCTCTGCATATTAAGAAGGATGTAAAGCAAACCACGGGATATTAACAGCGCTCTGCATATTAGTAACTACACGCTACTAAAAAACGAAAAATTATACGAATTATGCTAAAGAGCTTCGGCCATGACCTCCTTTAACAAGTCCCGCTCTATATCCTCTGGATTAGCAGACGTCACACCCAAGCTGTTCAGCAAAATCCGATCCTCCTCTTCCTCCATTGAATCAAATGCGTAGGTTCACCCAACACATTGCATTGTGCAGCCAATAATCCAAACCTACCAAACAAAACTAAAGCGCATCAAATTCAACACATTCACTCTCATAGTCGGCAAAGCTTCACACCTAAAATATTGAATTCGAACAATGAGACTAAGTTGAAACCTGAATTAGAAGCGCGGTGAAGCAACCAGAGGAGAATTAACTCCAATTTGAAAACACCAAAAATTATACGCAAAATCGGATGGAGAAATCTCTGTCAAAGATCGAATCAGGGAGATGAGGAAAGGAATCCGATTTCTTTACCGTTGATCGGAGATTCGGAAGGGTCGCAAGATTCCCTGAAACCTAGGGTCCGGCACCACCTCCGACTGGC

mRNA sequence

ATGTTAAATCTTCAAACTTTCTTCTCAATCAATCTCACATTCCGAGAAATCACCATGTCGTTTGAGGAGGATGAGGAGACCTTCGAGCACACTCTCCTTGTCGTTCGTGAGGTTTCCGTCTACAAAATCCCTCCTCGAACCACATCAGGCGGCTGTAAGTGCGGTGAGTGGCTACAATCCGACAAGATCTGGTCCGGCCGCCTTCGAGTTGTGTCCTGTAAGGACCGATGTGAGATCCGATTGGAAGATCCCAACTCCGGCGAACTCTTTGCTGCTTGTTTTGTTAATCCAGGTCAGCGAGAGAACTCCGTTGAGACCGTTCTTGACTCTTCTCGATACTTCGTTTTGAAGATCGAGGACGGCCGGGGTAAGCACGCTTTTGTAGGGTTAGGTTTTGCCGAACGAAATGAAGCTTTTGATTTCAATGTGGCATTGTCCGACCATGAGAAGTATGTTAAGAGAGATCTTGAGAAAGATCCGAGTAGTGGCGGTAGCAGCGGCGGCGATGCCAACGAAGAGAGCCAGATTGATATCCATCCTGCTGTGAATCACAGATTGAAGGAAGGTGAAACAATTCGGATCAATGTGAAGCATAAGCCATCTAGTGGAACTGGTATGCTCTCAGCTGCTGGCTTGTCAGGGTCTGGTTCTGGAAAGCCAAAAACTCTGAGTCTTGCTCCACCACCAACTGGAGCTAGGAAAATCAGTTCTCCTCTTCCACCCCCTCCAAATGATCCTGCTGCGCGGAAGTTATCTGCCAGCACGTGCCGTGATGTCGATCGTGAAGGAAAAAATGACAATGTAAGCAACGCAAGCGACCCTTTATCAGATCTTTCCCAACTTGAGGTAGCTCGTATTTTCGTACGAGTGTATGTATCCTTAGGAACTCGTGTCGAGAAACAAGCTACCGCCATTTTAACTTGTGTTTGCATCACATTTGCAGAGAAATCTTCCTTCTGCTCCAGGTTCGACAAAGGCGGCAGCATCAGGATGGGCAGCATTCTGATCAGTATAAGTTATTCGCCGACTGAGAAGAACCGACACCGGCAGCTCTTACATTGTTTGAACTACTTGAAGGAGTTGATTGATGTTCAAGCCCAGTGCTGATTGCTCTTTCTTGGTTTCCTCGGATTTTAGCCAGCAGCTCTGCTGAAGATAAGGCCTTTCCACAAGATGTTCCAGCGGCATAGCCATTTAAATGGCTAGTTCCATTTCTAGATACTTCATCTGAGGATTTGGAATTGTTGTTTACTAGAGAGTTAACAGTTGAACCAAACTTCCGACCCACAGACGATGGTGCACCAGCAGTTCCAGCTTTTCCAGTCCATGTTGGAACTGAGATGCTCTCGTTACTTCGCAGCATTCTAGACTGGCGCAATGCCTCGGCTGCTCTACGTGCAACTTGAGAAGCTTGCTCCTCTAGCCGTATCTTCTCCCCATCATCCGCGTTAACAATGATATCATGATTAACAACGCTCTGCATATTAAGAAGGATGTAAAGCAAACCACGGGATATTAACAGCGCTCTGCATATTAGTAACTACACGCTACTAAAAAACGAAAAATTATACGAATTATGCTAAAGAGCTTCGGCCATGACCTCCTTTAACAAGTCCCGCTCTATATCCTCTGGATTAGCAGACGTCACACCCAAGCTGTTCAGCAAAATCCGATCCTCCTCTTCCTCCATTGAATCAAATGCGTAGGTTCACCCAACACATTGCATTGTGCAGCCAATAATCCAAACCTACCAAACAAAACTAAAGCGCATCAAATTCAACACATTCACTCTCATAGTCGGCAAAGCTTCACACCTAAAATATTGAATTCGAACAATGAGACTAAGTTGAAACCTGAATTAGAAGCGCGGTGAAGCAACCAGAGGAGAATTAACTCCAATTTGAAAACACCAAAAATTATACGCAAAATCGGATGGAGAAATCTCTGTCAAAGATCGAATCAGGGAGATGAGGAAAGGAATCCGATTTCTTTACCGTTGATCGGAGATTCGGAAGGGTCGCAAGATTCCCTGAAACCTAGGGTCCGGCACCACCTCCGACTGGC

Coding sequence (CDS)

ATGTTAAATCTTCAAACTTTCTTCTCAATCAATCTCACATTCCGAGAAATCACCATGTCGTTTGAGGAGGATGAGGAGACCTTCGAGCACACTCTCCTTGTCGTTCGTGAGGTTTCCGTCTACAAAATCCCTCCTCGAACCACATCAGGCGGCTGTAAGTGCGGTGAGTGGCTACAATCCGACAAGATCTGGTCCGGCCGCCTTCGAGTTGTGTCCTGTAAGGACCGATGTGAGATCCGATTGGAAGATCCCAACTCCGGCGAACTCTTTGCTGCTTGTTTTGTTAATCCAGGTCAGCGAGAGAACTCCGTTGAGACCGTTCTTGACTCTTCTCGATACTTCGTTTTGAAGATCGAGGACGGCCGGGGTAAGCACGCTTTTGTAGGGTTAGGTTTTGCCGAACGAAATGAAGCTTTTGATTTCAATGTGGCATTGTCCGACCATGAGAAGTATGTTAAGAGAGATCTTGAGAAAGATCCGAGTAGTGGCGGTAGCAGCGGCGGCGATGCCAACGAAGAGAGCCAGATTGATATCCATCCTGCTGTGAATCACAGATTGAAGGAAGGTGAAACAATTCGGATCAATGTGAAGCATAAGCCATCTAGTGGAACTGGTATGCTCTCAGCTGCTGGCTTGTCAGGGTCTGGTTCTGGAAAGCCAAAAACTCTGAGTCTTGCTCCACCACCAACTGGAGCTAGGAAAATCAGTTCTCCTCTTCCACCCCCTCCAAATGATCCTGCTGCGCGGAAGTTATCTGCCAGCACGTGCCGTGATGTCGATCGTGAAGGAAAAAATGACAATGTAAGCAACGCAAGCGACCCTTTATCAGATCTTTCCCAACTTGAGGTAGCTCGTATTTTCGTACGAGTGTATGTATCCTTAGGAACTCGTGTCGAGAAACAAGCTACCGCCATTTTAACTTGTGTTTGCATCACATTTGCAGAGAAATCTTCCTTCTGCTCCAGGTTCGACAAAGGCGGCAGCATCAGGATGGGCAGCATTCTGATCAGTATAAGTTATTCGCCGACTGAGAAGAACCGACACCGGCAGCTCTTACATTGTTTGAACTACTTGAAGGAGTTGATTGATGTTCAAGCCCAGTGCTGA

Protein sequence

MLNLQTFFSINLTFREITMSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEAFDFNVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKHKPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRDVDREGKNDNVSNASDPLSDLSQLEVARIFVRVYVSLGTRVEKQATAILTCVCITFAEKSSFCSRFDKGGSIRMGSILISISYSPTEKNRHRQLLHCLNYLKELIDVQAQC

Homology

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BLAST of Lsi05G010290 vs. ExPASy Swiss-Prot
Match: Q681Q7 (Uncharacterized protein At1g03900 OS=Arabidopsis thaliana OX=3702 GN=At1g03900 PE=1 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 9.0e-100
Identity = 192/267 (71.91%), Postives = 220/267 (82.40%), Query Frame = 0


Query: 19  MSF--EEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDR 78
           MSF  EE+EETFEHTLLVVREVSVYKIPPRTTSGG KCGEWLQSDKIWSGRLRVVSCKDR
Sbjct: 1   MSFEEEEEEETFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSCKDR 60

Query: 79  CEIRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERN 138
           CEIRLED NSG+LFAACFV+PG+RENSVE  LDSSRYFVL+I+DGRGK+AF+GLGFAERN
Sbjct: 61  CEIRLEDSNSGDLFAACFVDPGRRENSVEPSLDSSRYFVLRIDDGRGKYAFIGLGFAERN 120

Query: 139 EAFDFNVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINV 198
           EAFDFNVALSDHEKYV+R+ EK+      +G  +  ++ IDIHPAVNHRLKEGETIRINV
Sbjct: 121 EAFDFNVALSDHEKYVRREKEKE------TGETSESDNHIDIHPAVNHRLKEGETIRINV 180

Query: 199 KHKP-SSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAST 258
           K KP ++GTGMLSAA    SG+GKPK L+LAPPP  A    SPLPPPPNDP A ++++  
Sbjct: 181 KPKPTTNGTGMLSAA---LSGTGKPKPLALAPPPKAAGVTRSPLPPPPNDPVASRIASDG 240

Query: 259 CRDVDREGKNDNVSNASDPLSDLSQLE 283
           C++          S  ++PLSDLSQL+
Sbjct: 241 CKE----------SRRNEPLSDLSQLK 248

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BLAST of Lsi05G010290 vs. ExPASy Swiss-Prot
Match: Q6P756 (Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Necap2 PE=1 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-36
Identity = 95/223 (42.60%), Postives = 128/223 (57.40%), Query Frame = 0


Query: 24  DEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLED 83
           +E  +E  L V  EV VY+IPPR T+ G +  EW      WSGRLR+ +      I+LED
Sbjct: 2   EESEYESVLCVKPEVHVYRIPPRATNRGYRASEWQLDQPSWSGRLRITAKGKVAYIKLED 61

Query: 84  PNSGELFAACFVN--PGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEAFDF 143
             SGELFA   V+  PG    +VE+V DSSRYFV++IEDG G+ AF+G+GF +R +AFDF
Sbjct: 62  RTSGELFAQAPVDQFPG---TAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDF 121

Query: 144 NVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKHKPS 203
           NVAL DH K+VK+  E            A +    D  P ++   KEG+TI+IN+     
Sbjct: 122 NVALQDHFKWVKQQCE-----------FAKQAQNPDEGPKLDLGFKEGQTIKINI----- 181

Query: 204 SGTGMLSAAGLSGSGSGKPKT---LSLAPPPTGARKISSPLPP 242
               M    G +G+   +P +   LSL PPP G  K+S+ +PP
Sbjct: 182 --ANMRKKEGAAGAPRTRPASAGGLSLLPPPPGG-KMSTLIPP 202

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BLAST of Lsi05G010290 vs. ExPASy Swiss-Prot
Match: Q9D1J1 (Adaptin ear-binding coat-associated protein 2 OS=Mus musculus OX=10090 GN=Necap2 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.1e-36
Identity = 95/223 (42.60%), Postives = 127/223 (56.95%), Query Frame = 0


Query: 24  DEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLED 83
           +E  +E  L V  EV VY+IPPR T+ G +  EW      WSGRLR+ +      I+LED
Sbjct: 2   EESEYESVLCVKPEVHVYRIPPRATNRGYRASEWQLDQPSWSGRLRITAKGKVAYIKLED 61

Query: 84  PNSGELFAACFVN--PGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEAFDF 143
             SGELFA   V+  PG    +VE+V DSSRYFV++IEDG G+ AF+GLGF +R +AFDF
Sbjct: 62  RTSGELFAQAPVDQFPG---TAVESVTDSSRYFVIRIEDGNGRRAFIGLGFGDRGDAFDF 121

Query: 144 NVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKHKPS 203
           NVAL DH K+VK+  E            A +    D  P ++   K+G+TI+IN+     
Sbjct: 122 NVALQDHFKWVKQQCE-----------FAKQAQNPDEGPKLDLGFKDGQTIKINI----- 181

Query: 204 SGTGMLSAAGLSGSGSGKPKT---LSLAPPPTGARKISSPLPP 242
               M    G +G+   +P +   LSL PPP G  K S+ +PP
Sbjct: 182 --ANMRKKEGAAGTPRARPTSAGGLSLLPPPPGG-KSSTVIPP 202

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BLAST of Lsi05G010290 vs. ExPASy Swiss-Prot
Match: Q9NVZ3 (Adaptin ear-binding coat-associated protein 2 OS=Homo sapiens OX=9606 GN=NECAP2 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.4e-36
Identity = 95/230 (41.30%), Postives = 130/230 (56.52%), Query Frame = 0


Query: 24  DEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLED 83
           +E  +E  L V  +V VY+IPPR T+ G +  EW      WSGRLR+ +      I+LED
Sbjct: 2   EESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLED 61

Query: 84  PNSGELFAACFVN--PGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEAFDF 143
             SGELFA   V+  PG    +VE+V DSSRYFV++IEDG G+ AF+G+GF +R +AFDF
Sbjct: 62  RTSGELFAQAPVDQFPG---TAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDF 121

Query: 144 NVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKHKPS 203
           NVAL DH K+VK+  E            A +    D  P ++   KEG+TI++N+     
Sbjct: 122 NVALQDHFKWVKQQCE-----------FAKQAQNPDQGPKLDLGFKEGQTIKLNI----- 181

Query: 204 SGTGMLSAAGLSGSGSGKPKT---LSLAPPPTGARKISSPLPPPPNDPAA 249
               M    G +G+   +P +   LSL PPP G +  +S L PPP +  A
Sbjct: 182 --ANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGK--TSTLIPPPGEQLA 208

[Close]

BLAST of Lsi05G010290 vs. ExPASy Swiss-Prot
Match: Q5E9Q4 (Adaptin ear-binding coat-associated protein 2 OS=Bos taurus OX=9913 GN=NECAP2 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.0e-36
Identity = 90/215 (41.86%), Postives = 123/215 (57.21%), Query Frame = 0


Query: 24  DEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCEIRLED 83
           +E  +E  L V  +V VY+IPPR T+ G +  EW      WSGRLR+ +      I+LED
Sbjct: 2   EEAEYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQVAYIKLED 61

Query: 84  PNSGELFAACFVN--PGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEAFDF 143
             SGELFA   V+  PG    +VE+V DSSRYFV++IEDG G+ AF+G+GF +R +AFDF
Sbjct: 62  RTSGELFAQAPVDQFPG---TAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDF 121

Query: 144 NVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKHKPS 203
           NVAL DH K+VK+  E            A +    D  P ++   KEG+TI++N+     
Sbjct: 122 NVALQDHFKWVKQQCE-----------FAKQAQNPDQGPKLDLSFKEGQTIKLNI----- 181

Query: 204 SGTGMLSAAGLSGSGSGKPKT---LSLAPPPTGAR 234
               M    G +G+   +P +   LSL PPP GA+
Sbjct: 182 --ASMKKKDGAAGTPRARPTSTGGLSLLPPPPGAK 195

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BLAST of Lsi05G010290 vs. ExPASy TrEMBL
Match: A0A5A7T746 (ABC transporter family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00160 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 7.0e-140
Identity = 259/300 (86.33%), Postives = 272/300 (90.67%), Query Frame = 0


Query: 19  MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 78
           MSFEED+ETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1   MSFEEDDETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 79  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 138
           IRLEDPNSGELFAACFVNPGQRE+SVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA
Sbjct: 61  IRLEDPNSGELFAACFVNPGQRESSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 120

Query: 139 FDFNVALSDHEKYVKRDLEKDPSSGGS---SGGDANEESQIDIHPAVNHRLKEGETIRIN 198
           FDFNVALSDHEKYV+RDLEKDP+SGG+   SGGDANEESQIDIHPAVNHRLKEGETIRIN
Sbjct: 121 FDFNVALSDHEKYVRRDLEKDPTSGGNGSCSGGDANEESQIDIHPAVNHRLKEGETIRIN 180

Query: 199 VKHKPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAST 258
           VKHKPSSGTGMLSAAGLSGSGSGK KTL+LAPPPTGARKIS+PLPPPPNDPAARKLSAST
Sbjct: 181 VKHKPSSGTGMLSAAGLSGSGSGKSKTLTLAPPPTGARKISTPLPPPPNDPAARKLSAST 240

Query: 259 CRDVDREGKNDNVSNASDPLSDLSQLEVARIFVRVYVSLGTRVEKQATAILTCVCITFAE 316
           CR V  EGK DNVSNA+DPLSDLSQLE+A I  R    +G  V +   + L C+     E
Sbjct: 241 CRGVSHEGKKDNVSNATDPLSDLSQLELALIIARATSRIGPGV-RSTLSYLKCLSYELRE 299

[Close]

BLAST of Lsi05G010290 vs. ExPASy TrEMBL
Match: A0A0A0LA95 (DUF1681 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G375730 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.9e-138
Identity = 251/267 (94.01%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 19  MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 78
           MSFEED+ETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1   MSFEEDDETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 79  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 138
           IRLEDPNSGELFAACFVNPGQRE+SVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA
Sbjct: 61  IRLEDPNSGELFAACFVNPGQRESSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 120

Query: 139 FDFNVALSDHEKYVKRDLEKDPSSGGS---SGGDANEESQIDIHPAVNHRLKEGETIRIN 198
           FDFNVALSDHEKYV+RDLEKDP+SGG+   SGGDANEESQIDIHPAVNHRLKEGETIRIN
Sbjct: 121 FDFNVALSDHEKYVRRDLEKDPTSGGNSSGSGGDANEESQIDIHPAVNHRLKEGETIRIN 180

Query: 199 VKHKPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAST 258
           VKHKPSSGTGMLSAAGLSGSGSGK KTL+LAPPPTGARKIS+PLPPPPNDPAARKLSAST
Sbjct: 181 VKHKPSSGTGMLSAAGLSGSGSGKSKTLTLAPPPTGARKISTPLPPPPNDPAARKLSAST 240

Query: 259 CRDVDREGKNDNVSNASDPLSDLSQLE 283
           CR V  EGK DNVSN+SDPLSDLSQLE
Sbjct: 241 CRGVSHEGKEDNVSNSSDPLSDLSQLE 267

[Close]

BLAST of Lsi05G010290 vs. ExPASy TrEMBL
Match: A0A1S3BHE2 (uncharacterized protein At1g03900 OS=Cucumis melo OX=3656 GN=LOC103489862 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.9e-138
Identity = 251/267 (94.01%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 19  MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 78
           MSFEED+ETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1   MSFEEDDETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 79  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 138
           IRLEDPNSGELFAACFVNPGQRE+SVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA
Sbjct: 61  IRLEDPNSGELFAACFVNPGQRESSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 120

Query: 139 FDFNVALSDHEKYVKRDLEKDPSSGGS---SGGDANEESQIDIHPAVNHRLKEGETIRIN 198
           FDFNVALSDHEKYV+RDLEKDP+SGG+   SGGDANEESQIDIHPAVNHRLKEGETIRIN
Sbjct: 121 FDFNVALSDHEKYVRRDLEKDPTSGGNGSCSGGDANEESQIDIHPAVNHRLKEGETIRIN 180

Query: 199 VKHKPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAST 258
           VKHKPSSGTGMLSAAGLSGSGSGK KTL+LAPPPTGARKIS+PLPPPPNDPAARKLSAST
Sbjct: 181 VKHKPSSGTGMLSAAGLSGSGSGKSKTLTLAPPPTGARKISTPLPPPPNDPAARKLSAST 240

Query: 259 CRDVDREGKNDNVSNASDPLSDLSQLE 283
           CR V  EGK DNVSNA+DPLSDLSQLE
Sbjct: 241 CRGVSHEGKKDNVSNATDPLSDLSQLE 267

[Close]

BLAST of Lsi05G010290 vs. ExPASy TrEMBL
Match: A0A6J1HLP0 (uncharacterized protein At1g03900-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464096 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 2.3e-135
Identity = 247/264 (93.56%), Postives = 252/264 (95.45%), Query Frame = 0


Query: 19  MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 78
           MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1   MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 79  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 138
           IRLEDPNSGELFAACFVNPGQRENSVE VLDSSRYFVLKIEDG+GKHAFVGLGFAERNEA
Sbjct: 61  IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120

Query: 139 FDFNVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKH 198
           FDFNVALSDHEKYV+RD EKDP    + GGD NEES IDIHPAVNHRLKEGETIRINVKH
Sbjct: 121 FDFNVALSDHEKYVRRDHEKDP----TGGGDVNEESHIDIHPAVNHRLKEGETIRINVKH 180

Query: 199 KPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRD 258
           KPSSGTGMLSAAGLSGSG+GKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRD
Sbjct: 181 KPSSGTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRD 240

Query: 259 VDREGKNDNVSNASDPLSDLSQLE 283
           V REGK DNVS AS+PLSDLSQLE
Sbjct: 241 VGREGKRDNVSTASNPLSDLSQLE 260

[Close]

BLAST of Lsi05G010290 vs. ExPASy TrEMBL
Match: A0A6J1HUU0 (uncharacterized protein At1g03900-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467022 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 5.2e-135
Identity = 246/264 (93.18%), Postives = 251/264 (95.08%), Query Frame = 0


Query: 19  MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 78
           MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRV SCKDRCE
Sbjct: 1   MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVASCKDRCE 60

Query: 79  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 138
           IRLEDPNSGELFAACFVNPGQRENSVE VLDSSRYFVLKIEDG+GKHAFVGLGFAERNEA
Sbjct: 61  IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120

Query: 139 FDFNVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKH 198
           FDFNVALSDHEKYV+RD EKDP    + GG+ NEES IDIHPAVNHRLKEGETIRINVKH
Sbjct: 121 FDFNVALSDHEKYVRRDHEKDP----TGGGNVNEESHIDIHPAVNHRLKEGETIRINVKH 180

Query: 199 KPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRD 258
           KPSSGTGMLSAAGLSGSG+GKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAS CRD
Sbjct: 181 KPSSGTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASACRD 240

Query: 259 VDREGKNDNVSNASDPLSDLSQLE 283
           V REGK DNVSNASDPLSDLSQLE
Sbjct: 241 VGREGKRDNVSNASDPLSDLSQLE 260

[Close]

BLAST of Lsi05G010290 vs. NCBI nr
Match: XP_038889027.1 (uncharacterized protein At1g03900 isoform X1 [Benincasa hispida])

HSP 1 Score: 515.8 bits (1327), Expect = 3.1e-142
Identity = 256/264 (96.97%), Postives = 260/264 (98.48%), Query Frame = 0


Query: 19  MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 78
           MSFEED+ETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1   MSFEEDDETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 79  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 138
           IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA
Sbjct: 61  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 120

Query: 139 FDFNVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKH 198
           FDFNVALSDHEKYV+RDLEKDP+SGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKH
Sbjct: 121 FDFNVALSDHEKYVRRDLEKDPASGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKH 180

Query: 199 KPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRD 258
           KPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKIS+PLPPPPNDPA RKLSASTCRD
Sbjct: 181 KPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISTPLPPPPNDPAVRKLSASTCRD 240

Query: 259 VDREGKNDNVSNASDPLSDLSQLE 283
           V  EGK DNVSNASDPLSDLSQLE
Sbjct: 241 VGHEGKKDNVSNASDPLSDLSQLE 264

[Close]

BLAST of Lsi05G010290 vs. NCBI nr
Match: KAA0038016.1 (ABC transporter family protein [Cucumis melo var. makuwa] >TYK02211.1 ABC transporter family protein [Cucumis melo var. makuwa])

HSP 1 Score: 506.9 bits (1304), Expect = 1.5e-139
Identity = 259/300 (86.33%), Postives = 272/300 (90.67%), Query Frame = 0


Query: 19  MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 78
           MSFEED+ETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1   MSFEEDDETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 79  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 138
           IRLEDPNSGELFAACFVNPGQRE+SVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA
Sbjct: 61  IRLEDPNSGELFAACFVNPGQRESSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 120

Query: 139 FDFNVALSDHEKYVKRDLEKDPSSGGS---SGGDANEESQIDIHPAVNHRLKEGETIRIN 198
           FDFNVALSDHEKYV+RDLEKDP+SGG+   SGGDANEESQIDIHPAVNHRLKEGETIRIN
Sbjct: 121 FDFNVALSDHEKYVRRDLEKDPTSGGNGSCSGGDANEESQIDIHPAVNHRLKEGETIRIN 180

Query: 199 VKHKPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAST 258
           VKHKPSSGTGMLSAAGLSGSGSGK KTL+LAPPPTGARKIS+PLPPPPNDPAARKLSAST
Sbjct: 181 VKHKPSSGTGMLSAAGLSGSGSGKSKTLTLAPPPTGARKISTPLPPPPNDPAARKLSAST 240

Query: 259 CRDVDREGKNDNVSNASDPLSDLSQLEVARIFVRVYVSLGTRVEKQATAILTCVCITFAE 316
           CR V  EGK DNVSNA+DPLSDLSQLE+A I  R    +G  V +   + L C+     E
Sbjct: 241 CRGVSHEGKKDNVSNATDPLSDLSQLELALIIARATSRIGPGV-RSTLSYLKCLSYELRE 299

[Close]

BLAST of Lsi05G010290 vs. NCBI nr
Match: XP_008447411.1 (PREDICTED: uncharacterized protein At1g03900 [Cucumis melo])

HSP 1 Score: 501.1 bits (1289), Expect = 8.0e-138
Identity = 251/267 (94.01%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 19  MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 78
           MSFEED+ETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1   MSFEEDDETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 79  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 138
           IRLEDPNSGELFAACFVNPGQRE+SVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA
Sbjct: 61  IRLEDPNSGELFAACFVNPGQRESSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 120

Query: 139 FDFNVALSDHEKYVKRDLEKDPSSGGS---SGGDANEESQIDIHPAVNHRLKEGETIRIN 198
           FDFNVALSDHEKYV+RDLEKDP+SGG+   SGGDANEESQIDIHPAVNHRLKEGETIRIN
Sbjct: 121 FDFNVALSDHEKYVRRDLEKDPTSGGNGSCSGGDANEESQIDIHPAVNHRLKEGETIRIN 180

Query: 199 VKHKPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAST 258
           VKHKPSSGTGMLSAAGLSGSGSGK KTL+LAPPPTGARKIS+PLPPPPNDPAARKLSAST
Sbjct: 181 VKHKPSSGTGMLSAAGLSGSGSGKSKTLTLAPPPTGARKISTPLPPPPNDPAARKLSAST 240

Query: 259 CRDVDREGKNDNVSNASDPLSDLSQLE 283
           CR V  EGK DNVSNA+DPLSDLSQLE
Sbjct: 241 CRGVSHEGKKDNVSNATDPLSDLSQLE 267

[Close]

BLAST of Lsi05G010290 vs. NCBI nr
Match: XP_004151990.1 (uncharacterized protein At1g03900 [Cucumis sativus] >KGN57894.1 hypothetical protein Csa_009804 [Cucumis sativus])

HSP 1 Score: 501.1 bits (1289), Expect = 8.0e-138
Identity = 251/267 (94.01%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 19  MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 78
           MSFEED+ETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1   MSFEEDDETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 79  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 138
           IRLEDPNSGELFAACFVNPGQRE+SVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA
Sbjct: 61  IRLEDPNSGELFAACFVNPGQRESSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 120

Query: 139 FDFNVALSDHEKYVKRDLEKDPSSGGS---SGGDANEESQIDIHPAVNHRLKEGETIRIN 198
           FDFNVALSDHEKYV+RDLEKDP+SGG+   SGGDANEESQIDIHPAVNHRLKEGETIRIN
Sbjct: 121 FDFNVALSDHEKYVRRDLEKDPTSGGNSSGSGGDANEESQIDIHPAVNHRLKEGETIRIN 180

Query: 199 VKHKPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAST 258
           VKHKPSSGTGMLSAAGLSGSGSGK KTL+LAPPPTGARKIS+PLPPPPNDPAARKLSAST
Sbjct: 181 VKHKPSSGTGMLSAAGLSGSGSGKSKTLTLAPPPTGARKISTPLPPPPNDPAARKLSAST 240

Query: 259 CRDVDREGKNDNVSNASDPLSDLSQLE 283
           CR V  EGK DNVSN+SDPLSDLSQLE
Sbjct: 241 CRGVSHEGKEDNVSNSSDPLSDLSQLE 267

[Close]

BLAST of Lsi05G010290 vs. NCBI nr
Match: XP_022963949.1 (uncharacterized protein At1g03900-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 491.9 bits (1265), Expect = 4.8e-135
Identity = 247/264 (93.56%), Postives = 252/264 (95.45%), Query Frame = 0


Query: 19  MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 78
           MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE
Sbjct: 1   MSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 79  IRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERNEA 138
           IRLEDPNSGELFAACFVNPGQRENSVE VLDSSRYFVLKIEDG+GKHAFVGLGFAERNEA
Sbjct: 61  IRLEDPNSGELFAACFVNPGQRENSVEAVLDSSRYFVLKIEDGQGKHAFVGLGFAERNEA 120

Query: 139 FDFNVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINVKH 198
           FDFNVALSDHEKYV+RD EKDP    + GGD NEES IDIHPAVNHRLKEGETIRINVKH
Sbjct: 121 FDFNVALSDHEKYVRRDHEKDP----TGGGDVNEESHIDIHPAVNHRLKEGETIRINVKH 180

Query: 199 KPSSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRD 258
           KPSSGTGMLSAAGLSGSG+GKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRD
Sbjct: 181 KPSSGTGMLSAAGLSGSGTGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSASTCRD 240

Query: 259 VDREGKNDNVSNASDPLSDLSQLE 283
           V REGK DNVS AS+PLSDLSQLE
Sbjct: 241 VGREGKRDNVSTASNPLSDLSQLE 260

[Close]

BLAST of Lsi05G010290 vs. TAIR 10
Match: AT1G03900.1 (non-intrinsic ABC protein 4 )

HSP 1 Score: 365.2 bits (936), Expect = 6.4e-101
Identity = 192/267 (71.91%), Postives = 220/267 (82.40%), Query Frame = 0


Query: 19  MSF--EEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDR 78
           MSF  EE+EETFEHTLLVVREVSVYKIPPRTTSGG KCGEWLQSDKIWSGRLRVVSCKDR
Sbjct: 1   MSFEEEEEEETFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSCKDR 60

Query: 79  CEIRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIEDGRGKHAFVGLGFAERN 138
           CEIRLED NSG+LFAACFV+PG+RENSVE  LDSSRYFVL+I+DGRGK+AF+GLGFAERN
Sbjct: 61  CEIRLEDSNSGDLFAACFVDPGRRENSVEPSLDSSRYFVLRIDDGRGKYAFIGLGFAERN 120

Query: 139 EAFDFNVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIRINV 198
           EAFDFNVALSDHEKYV+R+ EK+      +G  +  ++ IDIHPAVNHRLKEGETIRINV
Sbjct: 121 EAFDFNVALSDHEKYVRREKEKE------TGETSESDNHIDIHPAVNHRLKEGETIRINV 180

Query: 199 KHKP-SSGTGMLSAAGLSGSGSGKPKTLSLAPPPTGARKISSPLPPPPNDPAARKLSAST 258
           K KP ++GTGMLSAA    SG+GKPK L+LAPPP  A    SPLPPPPNDP A ++++  
Sbjct: 181 KPKPTTNGTGMLSAA---LSGTGKPKPLALAPPPKAAGVTRSPLPPPPNDPVASRIASDG 240

Query: 259 CRDVDREGKNDNVSNASDPLSDLSQLE 283
           C++          S  ++PLSDLSQL+
Sbjct: 241 CKE----------SRRNEPLSDLSQLK 248

[Close]

BLAST of Lsi05G010290 vs. TAIR 10
Match: AT3G58600.1 (Adaptin ear-binding coat-associated protein 1 NECAP-1 )

HSP 1 Score: 135.6 bits (340), Expect = 8.2e-32
Identity = 98/281 (34.88%), Postives = 141/281 (50.18%), Query Frame = 0


Query: 17  ITMSFEEDEETFEHTLLVVREVSVYKIPPRTTSGGCKCGEWLQSDKIWSGRLRVVSCKDR 76
           + +   E+ E  E  L  V E  VY IPPR T+   +  EW  +   W G L+VVS  + 
Sbjct: 21  VNVDDNEEREAIEIALFQVPECYVYLIPPRKTAASYRADEWDVNKWAWEGALKVVSKGEE 80

Query: 77  CEIRLEDPNSGELFAACFVNPGQRENSVETVLDSSRYFVLKIE---DGRGKHAFVGLGFA 136
           C I+L D  +GEL+A  F+  G+  + VE V+DSSRYFVL++E   DGR +HAF+GLGF 
Sbjct: 81  CIIKLVDKTTGELYAQAFLREGEL-HPVEAVIDSSRYFVLRVEEKIDGRVRHAFIGLGFR 140

Query: 137 ERNEAFDFNVALSDHEKYVKRDLEKDPSSGGSSGGDANEESQIDIHPAVNHRLKEGETIR 196
           ER EA+DF  AL DH KY+ +    +             E       +V++ LKEGETI 
Sbjct: 141 ERTEAYDFQAALHDHMKYLNKKKTAE-----------EMEQHYQNTSSVDYSLKEGETIV 200

Query: 197 INVKHK----PSSGTGMLSAAGLSGSGSGKP-----KTLSLAPPPTG-------ARKISS 256
           + +K++      S T   S   LS    GK       ++ L PPP G       A+K  S
Sbjct: 201 LQLKNRSDKDSKSKTVEKSLGNLSLEDKGKSIETTIPSIILPPPPPGPLSPVTTAQKSPS 260

Query: 257 PLPPPPN-DPAARKLSASTCRDVDREGKNDNVSNASDPLSD 278
            LPP  +   ++ +    T R+ + E K +++      + D
Sbjct: 261 SLPPSLSLQRSSEQQDLDTKREEEEEEKKEDLKAKDGGVED 289

The following BLAST results are available for this feature:

BLAST of Lsi05G010290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q681Q7	9.0e-100	71.91	Uncharacterized protein At1g03900 OS=Arabidopsis thaliana OX=3702 GN=At1g03900 P...	[more]
Q6P756	2.4e-36	42.60	Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus OX=10116 GN=N...	[more]
Q9D1J1	3.1e-36	42.60	Adaptin ear-binding coat-associated protein 2 OS=Mus musculus OX=10090 GN=Necap2...	[more]
Q9NVZ3	5.4e-36	41.30	Adaptin ear-binding coat-associated protein 2 OS=Homo sapiens OX=9606 GN=NECAP2 ...	[more]
Q5E9Q4	7.0e-36	41.86	Adaptin ear-binding coat-associated protein 2 OS=Bos taurus OX=9913 GN=NECAP2 PE...	[more]

BLAST of Lsi05G010290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T746	7.0e-140	86.33	ABC transporter family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0LA95	3.9e-138	94.01	DUF1681 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G375730 PE=...	[more]
A0A1S3BHE2	3.9e-138	94.01	uncharacterized protein At1g03900 OS=Cucumis melo OX=3656 GN=LOC103489862 PE=4 S...	[more]
A0A6J1HLP0	2.3e-135	93.56	uncharacterized protein At1g03900-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HUU0	5.2e-135	93.18	uncharacterized protein At1g03900-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of Lsi05G010290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889027.1	3.1e-142	96.97	uncharacterized protein At1g03900 isoform X1 [Benincasa hispida]	[more]
KAA0038016.1	1.5e-139	86.33	ABC transporter family protein [Cucumis melo var. makuwa] >TYK02211.1 ABC transp...	[more]
XP_008447411.1	8.0e-138	94.01	PREDICTED: uncharacterized protein At1g03900 [Cucumis melo]	[more]
XP_004151990.1	8.0e-138	94.01	uncharacterized protein At1g03900 [Cucumis sativus] >KGN57894.1 hypothetical pro...	[more]
XP_022963949.1	4.8e-135	93.56	uncharacterized protein At1g03900-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Lsi05G010290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03900.1	6.4e-101	71.91	non-intrinsic ABC protein 4	[more]
AT3G58600.1	8.2e-32	34.88	Adaptin ear-binding coat-associated protein 1 NECAP-1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 32..155 e-value: 6.1E-48 score: 163.8
IPR012466	NECAP, PHear domain	PFAM	PF07933	DUF1681	coord: 29..197 e-value: 1.3E-53 score: 180.9
IPR012466	NECAP, PHear domain	CDD	cd13228	PHear_NECAP	coord: 30..150 e-value: 2.90508E-72 score: 218.964
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..274
None	No IPR available	PANTHER	PTHR12847	ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED	coord: 19..283
None	No IPR available	PANTHER	PTHR12847:SF13	SUBFAMILY NOT NAMED	coord: 19..283
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 25..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G010290.1	Lsi05G010290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006897	endocytosis
cellular_component	GO:0030125	clathrin vesicle coat
cellular_component	GO:0016020	membrane