Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAAACTCCAAATCTTCCAAGCGCAATCCTTTTTGCGAGAAGCTTCTCAAGGCCTTTGGCGTTTATCCTAAAATCATCAAATTCAGTCCTTCCCCAAGCCGGCAAGAAGAACAACCCAACTATCCTCAGCAAATTCATATTCATGATCAAGCTAATGCCCCACCTGAAATAATGGACAAAAAAGTACAAAACTCGTCCAACAACAAATTGGGGAATAAATCAGGAGACCAAGATGTTAACGATGTGTTTAGCGATTACATAAATCGGGCTAAACGCAGGCTGGGAAGCATATCAAGCAAGCGATCACATGATTCGAGTAGCAAAGGAAAAGAGAACCTCAAAGATGATCGTCGTTTTTCAGATTATATTATTCGTGCTAGGAATAAGCTGAAGGCTACCTCCTCAAGTGTGGGATTCACTATAAGTAGCTCCAGAAAGTGA
mRNA sequence
ATGGGAAGAAACTCCAAATCTTCCAAGCGCAATCCTTTTTGCGAGAAGCTTCTCAAGGCCTTTGGCGTTTATCCTAAAATCATCAAATTCAGTCCTTCCCCAAGCCGGCAAGAAGAACAACCCAACTATCCTCAGCAAATTCATATTCATGATCAAGCTAATGCCCCACCTGAAATAATGGACAAAAAAGTACAAAACTCGTCCAACAACAAATTGGGGAATAAATCAGGAGACCAAGATGTTAACGATGTGTTTAGCGATTACATAAATCGGGCTAAACGCAGGCTGGGAAGCATATCAAGCAAGCGATCACATGATTCGAGTAGCAAAGGAAAAGAGAACCTCAAAGATGATCGTCGTTTTTCAGATTATATTATTCGTGCTAGGAATAAGCTGAAGGCTACCTCCTCAAGTGTGGGATTCACTATAAGTAGCTCCAGAAAGTGA
Coding sequence (CDS)
ATGGGAAGAAACTCCAAATCTTCCAAGCGCAATCCTTTTTGCGAGAAGCTTCTCAAGGCCTTTGGCGTTTATCCTAAAATCATCAAATTCAGTCCTTCCCCAAGCCGGCAAGAAGAACAACCCAACTATCCTCAGCAAATTCATATTCATGATCAAGCTAATGCCCCACCTGAAATAATGGACAAAAAAGTACAAAACTCGTCCAACAACAAATTGGGGAATAAATCAGGAGACCAAGATGTTAACGATGTGTTTAGCGATTACATAAATCGGGCTAAACGCAGGCTGGGAAGCATATCAAGCAAGCGATCACATGATTCGAGTAGCAAAGGAAAAGAGAACCTCAAAGATGATCGTCGTTTTTCAGATTATATTATTCGTGCTAGGAATAAGCTGAAGGCTACCTCCTCAAGTGTGGGATTCACTATAAGTAGCTCCAGAAAGTGA
Protein sequence
MGRNSKSSKRNPFCEKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKRSHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSVGFTISSSRK
Homology
BLAST of Lsi05G009110 vs. ExPASy TrEMBL
Match:
A0A5D3CQZ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00660 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 4.5e-29
Identity = 95/158 (60.13%), Postives = 114/158 (72.15%), Query Frame = 0
Query: 1 MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE----EQPNYPQQIHIHDQA 60
MGRN KSS N PFCEKLLKAFG+ PKI K SPS S E +Q N Q I++H +
Sbjct: 1 MGRNPKSSTPNTPFCEKLLKAFGISHRPKINKLSPSTSHHEQQHQQQNNSSQHIYVHHE- 60
Query: 61 NAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINRAKRRLGSISSKR--SHDSSSK 120
P IM+ K +S +NK G GD+D VNDVFS+YINRAKRRLG+I+SK+ ++DSS K
Sbjct: 61 ---PAIMEIKTHSSKSNKYG--GGDEDSVNDVFSNYINRAKRRLGNIASKKHSNNDSSGK 120
Query: 121 GKEN-LK-DDRRFSDYIIRARNKLKATSSSVGFTISSS 147
GKEN LK +DRRFSDYI RAR+KL+ATSSSVG T + S
Sbjct: 121 GKENSLKAEDRRFSDYIARARDKLRATSSSVGLTKTKS 152
BLAST of Lsi05G009110 vs. ExPASy TrEMBL
Match:
A0A0A0KG94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409360 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24
Identity = 89/158 (56.33%), Postives = 111/158 (70.25%), Query Frame = 0
Query: 1 MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE-----EQPNYPQQIHIHDQ 60
MG+NSKSS N PFCEKLLKAFG+ PKI K S S S E +Q N Q I++H +
Sbjct: 1 MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQRNSSQHIYVHHE 60
Query: 61 ANAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINRAKRRLGSISSKR-SHDSSSK 120
P +M+ K +S NNK GD+D VN FS+YINRAKRRL +++SK+ S+DSSS+
Sbjct: 61 ----PAVME-KTHSSKNNKYA--GGDEDSVNAAFSNYINRAKRRLENMASKKHSNDSSSR 120
Query: 121 GKE-NLK-DDRRFSDYIIRARNKLKATSSSVGFTISSS 147
GKE NLK +DRRFSDYI+RARNKL++TSSSVG + S
Sbjct: 121 GKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKS 151
BLAST of Lsi05G009110 vs. ExPASy TrEMBL
Match:
A0A6P5RSE8 (uncharacterized protein LOC110748293 OS=Prunus avium OX=42229 GN=LOC110748293 PE=4 SV=1)
HSP 1 Score: 61.2 bits (147), Expect = 4.1e-06
Identity = 47/137 (34.31%), Postives = 76/137 (55.47%), Query Frame = 0
Query: 23 VYPKIIKFSPSPSRQEEQPNYPQQ---------IHIHDQANAPPEIMDKKVQNSSNNKLG 82
V P +S + +++++P + + +H H+ A E +V+N G
Sbjct: 152 VQPHKATYSKAEEQEKQKPKHSESPLKGAVGEALHNHNAAVKVHEAEAPRVKNE-----G 211
Query: 83 NKSGDQDVNDVFSDYINRAKRRLGSISSKR--SHDSSSKGKENLKDDRRFSDYIIRARNK 142
K G D+ND FS+YIN+AK ++ ++SS + D +K KE++KD FSDYI RA+NK
Sbjct: 212 KKPGGLDINDTFSEYINQAKIKIRTMSSNKISDDDDDAKKKESVKD--HFSDYIHRAKNK 271
Query: 143 LKATSSSVGFTISSSRK 149
K+T S++G S+S K
Sbjct: 272 FKSTPSNLGAGKSASFK 281
BLAST of Lsi05G009110 vs. ExPASy TrEMBL
Match:
A0A314Z5U6 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_08807 PE=4 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 9.2e-06
Identity = 47/142 (33.10%), Postives = 70/142 (49.30%), Query Frame = 0
Query: 24 YPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKL----------- 83
YPK + P E QP+ +Q P+ D ++ + L
Sbjct: 137 YPKAEEEKQKPKNSEAQPHKATYSKAEEQEKQKPKHSDSPLKGAVGEALDIHNAAVKAPQ 196
Query: 84 ----GNKSGDQDVNDVFSDYINRAKRRLGSISSKR--SHDSSSKGKENLKDDRRFSDYII 143
G K G D+ND FS+YIN+AK ++ ++SS D +K KE++KD FSDYI
Sbjct: 197 VKNEGKKPGGLDINDTFSEYINQAKLKIRTMSSNNISESDDDAKKKESVKD--HFSDYIH 256
Query: 144 RARNKLKATSSSVGFTISSSRK 149
RA+NK K+T S++G ++S K
Sbjct: 257 RAKNKFKSTPSNLGAGKNASFK 276
BLAST of Lsi05G009110 vs. ExPASy TrEMBL
Match:
A0A5E4EGF6 (PREDICTED: PHAVU_001G147900g OS=Prunus dulcis OX=3755 GN=ALMOND_2B019859 PE=4 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 1.6e-05
Identity = 48/145 (33.10%), Postives = 77/145 (53.10%), Query Frame = 0
Query: 15 EKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQ---------IHIHDQANAPPEIMDKKVQ 74
E+ K P +S + +++++P + + ++ HD A E +V+
Sbjct: 135 EEKQKPSEAQPNKATYSKAEEQEKQKPKHSESPLKGAVGEALYNHDAAVKVHEAEAPQVK 194
Query: 75 NSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKR--SHDSSSKGKENLKDDRRFSD 134
N G K G D+ND FS+YIN+AK ++ ++SS D +K KE++KD FSD
Sbjct: 195 NE-----GKKPGGLDINDTFSEYINQAKIKIRTMSSNNISESDDDAKKKESVKD--HFSD 254
Query: 135 YIIRARNKLKATSSSVGFTISSSRK 149
YI RA+NK K+T S++G S+S K
Sbjct: 255 YIHRAKNKFKSTPSNLGAGKSASFK 272
BLAST of Lsi05G009110 vs. NCBI nr
Match:
KAG6606435.1 (hypothetical protein SDJN03_03752, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 149.8 bits (377), Expect = 1.8e-32
Identity = 88/139 (63.31%), Postives = 103/139 (74.10%), Query Frame = 0
Query: 1 MGRNSKSSKRNPFCEKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIM 60
MGRNSKSSKRNP CEKLLKA G+YP+I+KF P P+RQEE P H + +I
Sbjct: 1 MGRNSKSSKRNPVCEKLLKALGLYPRILKFGPPPNRQEE-PKPAALAHSYSL-----QIQ 60
Query: 61 DKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKRSHDSSSKGKENLKDDRR 120
D +V+ + +DVNDVFSDYI+RAKRRLGSISSKR HD SS+GKEN+K+D R
Sbjct: 61 DDEVEK-------EQKPSEDVNDVFSDYISRAKRRLGSISSKR-HDWSSRGKENVKEDNR 120
Query: 121 FSDYIIRARNKLKATSSSV 140
FSDYI+RARNKLKATSSSV
Sbjct: 121 FSDYIVRARNKLKATSSSV 125
BLAST of Lsi05G009110 vs. NCBI nr
Match:
KAA0057288.1 (hypothetical protein E6C27_scaffold280G001290 [Cucumis melo var. makuwa] >TYK13444.1 hypothetical protein E5676_scaffold496G00660 [Cucumis melo var. makuwa])
HSP 1 Score: 137.5 bits (345), Expect = 9.3e-29
Identity = 95/158 (60.13%), Postives = 114/158 (72.15%), Query Frame = 0
Query: 1 MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE----EQPNYPQQIHIHDQA 60
MGRN KSS N PFCEKLLKAFG+ PKI K SPS S E +Q N Q I++H +
Sbjct: 1 MGRNPKSSTPNTPFCEKLLKAFGISHRPKINKLSPSTSHHEQQHQQQNNSSQHIYVHHE- 60
Query: 61 NAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINRAKRRLGSISSKR--SHDSSSK 120
P IM+ K +S +NK G GD+D VNDVFS+YINRAKRRLG+I+SK+ ++DSS K
Sbjct: 61 ---PAIMEIKTHSSKSNKYG--GGDEDSVNDVFSNYINRAKRRLGNIASKKHSNNDSSGK 120
Query: 121 GKEN-LK-DDRRFSDYIIRARNKLKATSSSVGFTISSS 147
GKEN LK +DRRFSDYI RAR+KL+ATSSSVG T + S
Sbjct: 121 GKENSLKAEDRRFSDYIARARDKLRATSSSVGLTKTKS 152
BLAST of Lsi05G009110 vs. NCBI nr
Match:
KGN47879.1 (hypothetical protein Csa_004306 [Cucumis sativus])
HSP 1 Score: 122.5 bits (306), Expect = 3.1e-24
Identity = 89/158 (56.33%), Postives = 111/158 (70.25%), Query Frame = 0
Query: 1 MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE-----EQPNYPQQIHIHDQ 60
MG+NSKSS N PFCEKLLKAFG+ PKI K S S S E +Q N Q I++H +
Sbjct: 1 MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQRNSSQHIYVHHE 60
Query: 61 ANAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINRAKRRLGSISSKR-SHDSSSK 120
P +M+ K +S NNK GD+D VN FS+YINRAKRRL +++SK+ S+DSSS+
Sbjct: 61 ----PAVME-KTHSSKNNKYA--GGDEDSVNAAFSNYINRAKRRLENMASKKHSNDSSSR 120
Query: 121 GKE-NLK-DDRRFSDYIIRARNKLKATSSSVGFTISSS 147
GKE NLK +DRRFSDYI+RARNKL++TSSSVG + S
Sbjct: 121 GKENNLKAEDRRFSDYIVRARNKLRSTSSSVGLAKTKS 151
BLAST of Lsi05G009110 vs. NCBI nr
Match:
KAG6571440.1 (hypothetical protein SDJN03_28168, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 120.6 bits (301), Expect = 1.2e-23
Identity = 76/140 (54.29%), Postives = 91/140 (65.00%), Query Frame = 0
Query: 1 MGRNSKSSKRNPFCEKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIM 60
MG+N+KSSKR+ CE+ LKA G+ PSP+R EE PE+
Sbjct: 1 MGKNTKSSKRSSVCERFLKALGM-------CPSPTRHEEP--------------LAPEMD 60
Query: 61 DKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKRSHDSSSKGKENLKDDRR 120
K+ N + K + ND FSDYINRAKRRLGSISSKR HD SSKGKENLK+DRR
Sbjct: 61 KKQRLNINGAPQMEKKQKLEPNDAFSDYINRAKRRLGSISSKR-HDPSSKGKENLKEDRR 118
Query: 121 FSDYIIRARNKLKATSSSVG 141
F+DYIIRARN+L+ATSS+VG
Sbjct: 121 FTDYIIRARNRLRATSSTVG 118
BLAST of Lsi05G009110 vs. NCBI nr
Match:
XP_021803981.1 (uncharacterized protein LOC110748293 [Prunus avium])
HSP 1 Score: 61.2 bits (147), Expect = 8.5e-06
Identity = 47/137 (34.31%), Postives = 76/137 (55.47%), Query Frame = 0
Query: 23 VYPKIIKFSPSPSRQEEQPNYPQQ---------IHIHDQANAPPEIMDKKVQNSSNNKLG 82
V P +S + +++++P + + +H H+ A E +V+N G
Sbjct: 152 VQPHKATYSKAEEQEKQKPKHSESPLKGAVGEALHNHNAAVKVHEAEAPRVKNE-----G 211
Query: 83 NKSGDQDVNDVFSDYINRAKRRLGSISSKR--SHDSSSKGKENLKDDRRFSDYIIRARNK 142
K G D+ND FS+YIN+AK ++ ++SS + D +K KE++KD FSDYI RA+NK
Sbjct: 212 KKPGGLDINDTFSEYINQAKIKIRTMSSNKISDDDDDAKKKESVKD--HFSDYIHRAKNK 271
Query: 143 LKATSSSVGFTISSSRK 149
K+T S++G S+S K
Sbjct: 272 FKSTPSNLGAGKSASFK 281
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CQZ7 | 4.5e-29 | 60.13 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KG94 | 1.5e-24 | 56.33 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409360 PE=4 SV=1 | [more] |
A0A6P5RSE8 | 4.1e-06 | 34.31 | uncharacterized protein LOC110748293 OS=Prunus avium OX=42229 GN=LOC110748293 PE... | [more] |
A0A314Z5U6 | 9.2e-06 | 33.10 | Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_088... | [more] |
A0A5E4EGF6 | 1.6e-05 | 33.10 | PREDICTED: PHAVU_001G147900g OS=Prunus dulcis OX=3755 GN=ALMOND_2B019859 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
KAG6606435.1 | 1.8e-32 | 63.31 | hypothetical protein SDJN03_03752, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0057288.1 | 9.3e-29 | 60.13 | hypothetical protein E6C27_scaffold280G001290 [Cucumis melo var. makuwa] >TYK134... | [more] |
KGN47879.1 | 3.1e-24 | 56.33 | hypothetical protein Csa_004306 [Cucumis sativus] | [more] |
KAG6571440.1 | 1.2e-23 | 54.29 | hypothetical protein SDJN03_28168, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_021803981.1 | 8.5e-06 | 34.31 | uncharacterized protein LOC110748293 [Prunus avium] | [more] |
Match Name | E-value | Identity | Description | |