Lsi05G007450 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G007450
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ubiquitin carboxyl-terminal hydrolase family protein
Location	chr05: 10321005 .. 10322240 (+)
RNA-Seq Expression	Lsi05G007450
Synteny	Lsi05G007450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTCCAAATTATTAGAATCCCTCATCGTTTCAGCCAGACTCGTGCTTTTGTTGATGCAAAGGTCAAATGGGTAAGAGATCCGTACCTTGATTTTGCAGTTCAAAGAGAGAAGAACCTCAGACAAGTAATTTCCCTTAAGAATATAATCGCTTCGAGTCCTTTAAAATCTCTTCCACTTTCCTCTGTCTCTTTACTGAAACAGAACCTCAAAGTCCCTACTACCACCATCTCTAAGTTCTTCGAGTTATACCCCTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGCCTCCATCCTCATGTCAAGCTCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCAACCACATAGGGATGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTAAATGTCATTGAGAGGCTGCAATGGGATTTGGGTCTACCCTACAGGTTCATTCCAACTCTTCTTGCTGATTATCCTGAATATTTTCAGGTTTGTAGTGTGAAAGACTGTTTAACAGGTGAACAAACCCTTGCATTAGAGCTACTTTCTTGGAGGAAAGATCTTTCAGTCTCTGAACTGAAAAAAAGGGAATATCTGGAAGGCAATGTTGGGAGTAGGAATAGAAATCATATTGCATTTCCAATGAGTTTCCCAAGGGGTTTCGATTTGCAGAAGAAGGTGATGAATTGGGTGGAGGAGTGGCAGCGTCTGCCCTACATTTCACCATACGAAAATGCATTCCATCTAGTACCAAATAGTGACCAAGCTGAGAAATGGGCTGTGGCAGTTCTCCATGAGTTGCTTTACCTTATGGTCTCGAAGAAAACCGAAAAAGAGAACATCTTCTATTTGGGAGAGTATTTGGGATTCGGTTCTAGGTTGAAGAAAGCCTTAGTTCATCACCCAGGTATATTTTATGTCTCAAACAAGATTAGAACACAAACTGTGGTCCTTAGAGAGGCTTATAAGAAGGATTTTTTGGTAGAAAAACACCCTTTGATGGGAATGAGGCATCAATACATTCACCTTATGAACAAAGTTGTAAGGAGACCTAGACCAGGCATCATATTAGCTTCTTCCAGAGTTAAAAGACAGAATAATCCCTTTGCCAGAATAAAGAAGTTTAACTGAGAATTCATTGTGCATTTTCAGTCATCGGTTGAGGAAGACGATGCTTTCTCAAAACAGTGCTTCTCATGA

mRNA sequence

ATGATTCTCCAAATTATTAGAATCCCTCATCGTTTCAGCCAGACTCGTGCTTTTGTTGATGCAAAGGTCAAATGGGTAAGAGATCCGTACCTTGATTTTGCAGTTCAAAGAGAGAAGAACCTCAGACAAGTAATTTCCCTTAAGAATATAATCGCTTCGAGTCCTTTAAAATCTCTTCCACTTTCCTCTGTCTCTTTACTGAAACAGAACCTCAAAGTCCCTACTACCACCATCTCTAAGTTCTTCGAGTTATACCCCTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGCCTCCATCCTCATGTCAAGCTCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCAACCACATAGGGATGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTAAATGTCATTGAGAGGCTGCAATGGGATTTGGGTCTACCCTACAGGTTCATTCCAACTCTTCTTGCTGATTATCCTGAATATTTTCAGGTTTGTAGTGTGAAAGACTGTTTAACAGGTGAACAAACCCTTGCATTAGAGCTACTTTCTTGGAGGAAAGATCTTTCAGTCTCTGAACTGAAAAAAAGGGAATATCTGGAAGGCAATGTTGGGAGTAGGAATAGAAATCATATTGCATTTCCAATGAGTTTCCCAAGGGGTTTCGATTTGCAGAAGAAGGTGATGAATTGGGTGGAGGAGTGGCAGCGTCTGCCCTACATTTCACCATACGAAAATGCATTCCATCTAGTACCAAATAGTGACCAAGCTGAGAAATGGGCTGTGGCAGTTCTCCATGAGTTGCTTTACCTTATGGTCTCGAAGAAAACCGAAAAAGAGAACATCTTCTATTTGGGAGAGTATTTGGGATTCGGTTCTAGGTTGAAGAAAGCCTTAGTTCATCACCCAGGTATATTTTATGTCTCAAACAAGATTAGAACACAAACTGTGGTCCTTAGAGAGGCTTATAAGAAGGATTTTTTGGTAGAAAAACACCCTTTGATGGGAATGAGGCATCAATACATTCACCTTATGAACAAAGTTTCATCGGTTGAGGAAGACGATGCTTTCTCAAAACAGTGCTTCTCATGA

Coding sequence (CDS)

ATGATTCTCCAAATTATTAGAATCCCTCATCGTTTCAGCCAGACTCGTGCTTTTGTTGATGCAAAGGTCAAATGGGTAAGAGATCCGTACCTTGATTTTGCAGTTCAAAGAGAGAAGAACCTCAGACAAGTAATTTCCCTTAAGAATATAATCGCTTCGAGTCCTTTAAAATCTCTTCCACTTTCCTCTGTCTCTTTACTGAAACAGAACCTCAAAGTCCCTACTACCACCATCTCTAAGTTCTTCGAGTTATACCCCTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGCCTCCATCCTCATGTCAAGCTCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCAACCACATAGGGATGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTAAATGTCATTGAGAGGCTGCAATGGGATTTGGGTCTACCCTACAGGTTCATTCCAACTCTTCTTGCTGATTATCCTGAATATTTTCAGGTTTGTAGTGTGAAAGACTGTTTAACAGGTGAACAAACCCTTGCATTAGAGCTACTTTCTTGGAGGAAAGATCTTTCAGTCTCTGAACTGAAAAAAAGGGAATATCTGGAAGGCAATGTTGGGAGTAGGAATAGAAATCATATTGCATTTCCAATGAGTTTCCCAAGGGGTTTCGATTTGCAGAAGAAGGTGATGAATTGGGTGGAGGAGTGGCAGCGTCTGCCCTACATTTCACCATACGAAAATGCATTCCATCTAGTACCAAATAGTGACCAAGCTGAGAAATGGGCTGTGGCAGTTCTCCATGAGTTGCTTTACCTTATGGTCTCGAAGAAAACCGAAAAAGAGAACATCTTCTATTTGGGAGAGTATTTGGGATTCGGTTCTAGGTTGAAGAAAGCCTTAGTTCATCACCCAGGTATATTTTATGTCTCAAACAAGATTAGAACACAAACTGTGGTCCTTAGAGAGGCTTATAAGAAGGATTTTTTGGTAGAAAAACACCCTTTGATGGGAATGAGGCATCAATACATTCACCTTATGAACAAAGTTTCATCGGTTGAGGAAGACGATGCTTTCTCAAAACAGTGCTTCTCATGA

Protein sequence

MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVSSVEEDDAFSKQCFS

Homology

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BLAST of Lsi05G007450 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.5e-51
Identity = 125/350 (35.71%), Postives = 198/350 (56.57%), Query Frame = 0


Query: 13  SQTRAFVDAKVKWVRDPYLDFA--VQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQN 72
           +Q R +VD  +KW RDPY D    + R   L+ V+SLKN I   P + +P+S++S   + 
Sbjct: 19  TQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQ 78

Query: 73  LKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVV 132
             V +T I+ F   +PS+F +F  P   L P  +LT +A  L ++E  ++  Q   DD+ 
Sbjct: 79  FDV-STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVY--QTSADDLR 138

Query: 133 KRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTL 192
            RL KL++++    LPL++++ ++W LGLP  ++     +    F+   ++D   G + L
Sbjct: 139 DRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMED---GVKGL 198

Query: 193 ALELLSWRKDLSV---SELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEW 252
           A++     K LSV   + +KKR       G  +   I FP+   +G  L+ K+ +W+ E+
Sbjct: 199 AVDYNGGDKVLSVLQKNAMKKRR------GEVSLEEIEFPLFPSKGCRLRVKIEDWLMEF 258

Query: 253 QRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRL 312
           Q+LPY+SPY++   L P+SD AEK  V  LHELL L V    E++ +  L ++ G   ++
Sbjct: 259 QKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKV 318

Query: 313 KKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLM 357
            KA   HP IFY+S K +T T +LRE Y+    VE HP++G+R +YI LM
Sbjct: 319 HKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLM 355

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BLAST of Lsi05G007450 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.6e-35
Identity = 110/336 (32.74%), Postives = 172/336 (51.19%), Query Frame = 0


Query: 19  VDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVPTTTI 78
           V A VK  ++   D  VQR+K L+ V++++ I+ S P + + L  +   +++L +     
Sbjct: 72  VRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKR-- 131

Query: 79  SKFFEL---YPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKL 138
            +F  L   YP VF +           K+TS+A  L+ +E  I N     D +V +L KL
Sbjct: 132 RRFIALLRKYPGVF-EIVEEGAYSLRFKMTSEAERLYLDEMRIRNEL--EDVLVVKLRKL 191

Query: 139 LMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLS 198
           +M++   ++ L  I  L+ DLGLP  F  T+   YP+YF+V      +   +  ALEL  
Sbjct: 192 VMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV------VPTPRGPALELTH 251

Query: 199 WRKDLSVSELKKREYLEGNVGSRNRNHIA-FPMSF-----PRGFDLQKKVMNWVEEWQRL 258
           W  +L+VS  +  E       S  RN I   P  F     PRG +L K     + +++ +
Sbjct: 252 WDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 311

Query: 259 PYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKA 318
            YISPY++  HL   + + EK A  V+HELL L   K+T  +++ +  E   F  +L+  
Sbjct: 312 QYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGM 371

Query: 319 LVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPL 346
           L+ HP +FYVS K    +V LREAY+   L++K PL
Sbjct: 372 LIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPL 396

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BLAST of Lsi05G007450 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-33
Identity = 105/339 (30.97%), Postives = 172/339 (50.74%), Query Frame = 0


Query: 21  AKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVP-TTTIS 80
           A VK  ++   D  +QR+K L+ V+ L+NI+ + P + + L  +   +++L +     + 
Sbjct: 53  AAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLI 112

Query: 81  KFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLMLT 140
                +P VF   +  +      +LT  A  L+ +E  + N        V +L KLLM++
Sbjct: 113 ALLRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNES--EGLAVAKLRKLLMMS 172

Query: 141 GAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKD 200
              ++ +  +  L+ DLGLP  F  T+   YP+YF+V  +      ++  ALEL  W  +
Sbjct: 173 QEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM------DRGPALELTHWDPE 232

Query: 201 LSVS--ELKKREYLEGNVGSRNRNHIAFPMSF-----PRGFDLQKKVMNWVEEWQRLPYI 260
           L+VS  EL + E        RN   I  P+ F     P+G  L +     +  ++ +PYI
Sbjct: 233 LAVSAAELAEEESRAREAEERNL-IIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYI 292

Query: 261 SPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKALVH 320
           SPY +  HL   SD+ EK A  V+HE+L L V K+T  +++ +  E   F   L+  ++ 
Sbjct: 293 SPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIR 352

Query: 321 HPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQ 352
           HP +FYVS K    +V LREAYK   LVEK+ L+ ++ +
Sbjct: 353 HPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEK 381

[Close]

BLAST of Lsi05G007450 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-32
Identity = 104/338 (30.77%), Postives = 171/338 (50.59%), Query Frame = 0


Query: 21  AKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVP-TTTIS 80
           A VK  ++   D  +QR+K L+ V+ L+NI+ S+P + + L  +   +++L +     + 
Sbjct: 59  AAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLI 118

Query: 81  KFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLMLT 140
              + +P VF   +  +      +LT  A  L+ +E  +H         V +L KLLM++
Sbjct: 119 ALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDE--LHLKNESEGLAVTKLRKLLMMS 178

Query: 141 GAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKD 200
              ++ +  I  L+ DLGLP  F  T+   YP+YF+V  +      ++   LEL  W  +
Sbjct: 179 QDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQM------DRGPGLELTHWDPE 238

Query: 201 LSVSELKKREYLEGNVGSRNRNHIA-FPMSF-----PRGFDLQKKVMNWVEEWQRLPYIS 260
           L+VS  +  E        + RN I   P+ F     P+G  L +     V +++ +PYIS
Sbjct: 239 LAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYIS 298

Query: 261 PYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKALVHH 320
           PY +  HL   S + EK A  V+HE+L L + K+T  +++ +  E   F   L+  L+ H
Sbjct: 299 PYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 358

Query: 321 PGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQ 352
           P +FYVS K    +V LREAYK   LVEK  L+ ++ +
Sbjct: 359 PDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEK 387

[Close]

BLAST of Lsi05G007450 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-29
Identity = 103/360 (28.61%), Postives = 181/360 (50.28%), Query Frame = 0


Query: 12  FSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNL 71
           FSQ+   +  K   VRD   D  ++ EK +R+V+   ++I S P  ++ +S +  L + L
Sbjct: 34  FSQSTT-IPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRL 93

Query: 72  KV--PTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQAL--LLHKEESTIHNSQPHRDD 131
            +         F   +P VF  ++  +    + +LT +AL  + H+ E+ +        D
Sbjct: 94  GLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI----PD 153

Query: 132 VVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQ 191
            V RL KL+M++  G++ L  +   + + GLP  F  +++  +P++F++      + GE+
Sbjct: 154 AVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL------IDGEE 213

Query: 192 T--LALELLSWRKDLSVSELKKREYLEGNVGSRNRNHI--AFPMSFPRGFDLQKKVMNWV 251
           T    +E++    +LS+  +++   +E      +   +  +F ++FP GF + K     V
Sbjct: 214 TRDKYIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAV 273

Query: 252 EEWQRLPYISPYENA----FHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEY 311
            +WQRLPY SPYE+        +   ++ EK +VA +HELL L V KK   E I +    
Sbjct: 274 WKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNV 333

Query: 312 LGFGSRLKKALVHHPGIFYVS---NKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLM 357
           +    +LK+ L+ H GIFY+S   N  +  TV LRE YK+  LVE + +   R +   L+
Sbjct: 334 MNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382

[Close]

BLAST of Lsi05G007450 vs. ExPASy TrEMBL
Match: A0A5A7T0U1 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00230 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 332/359 (92.48%), Postives = 346/359 (96.38%), Query Frame = 0


Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MILQI RIPHRF+Q RAFVDAKVKWVRDPYLDFAVQREKNL+QVISLKNII SSPL S+P
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVK+TSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDL+VSELKKREYLEGN GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQ LPYISPYENAFHL PNSDQAEKWAVAVLHELLYL +SKKTEKENI+ LG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKV 360
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQY+HLMNKV
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKV 359

[Close]

BLAST of Lsi05G007450 vs. ExPASy TrEMBL
Match: A0A1S3C4Q9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 332/359 (92.48%), Postives = 346/359 (96.38%), Query Frame = 0


Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MILQI RIPHRF+Q RAFVDAKVKWVRDPYLDFAVQREKNL+QVISLKNII SSPL S+P
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVK+TSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDL+VSELKKREYLEGN GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQ LPYISPYENAFHL PNSDQAEKWAVAVLHELLYL +SKKTEKENI+ LG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKV 360
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQY+HLMNKV
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKV 359

[Close]

BLAST of Lsi05G007450 vs. ExPASy TrEMBL
Match: A0A6J1C3P8 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111008095 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181
Identity = 316/359 (88.02%), Postives = 335/359 (93.31%), Query Frame = 0


Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL+  RIP+R SQTR FVDAKVKWVRDPYLDFAVQREKNLRQVISLKN+I S+P KSLP
Sbjct: 1   MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTT+SKFF+LYPSVF QFQPS GLHP VKLT QAL LHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDDVVKRLAKLLMLTGAG+LPL VIERLQWDLGLPY+FIPTLLADYPEYFQVC+V+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALE+LSWRK+LS+SELK+RE  +GNV SR  NHIAFPMS P+GFD +KKVM
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW VAVLHELLYL+VSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKV 360
           GFGSR KKALVHHPGIFYVSNKIRTQTVVLREAY+KDFLVEKHPLMGMRHQYIHLMNKV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKV 359

[Close]

BLAST of Lsi05G007450 vs. ExPASy TrEMBL
Match: A0A6J1K6G9 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 4.9e-181
Identity = 313/358 (87.43%), Postives = 332/358 (92.74%), Query Frame = 0


Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL++ R PHR  QTRAFVDAKVKWVRDPYLDF VQREKNLRQVISLKN+I SSP KS+P
Sbjct: 1   MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLK PTT+ISKFF+LYPSVFIQFQPSLGLHPHVKLTSQ+L LHKEE TIHN
Sbjct: 61  LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDD+VKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIP LLADYPEYFQVCS++
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LEGN   RN NHIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW  AVLHELLYLMVSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNK 359
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYIHLMNK
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNK 358

[Close]

BLAST of Lsi05G007450 vs. ExPASy TrEMBL
Match: A0A6J1FNW3 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 3.5e-179
Identity = 314/358 (87.71%), Postives = 330/358 (92.18%), Query Frame = 0


Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL + R PHR  QTRAFVDAKVKWVRDPYLDF VQRE+NLRQVISLKN+I SSP KS+P
Sbjct: 1   MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREENLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLKVPTT+ISKF +LYPSVFIQFQPSLGLHPHVKLTSQAL LHKEESTIHN
Sbjct: 61  LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LEGN   RN  HIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW  AVLHELLYLMVSKKTEKENI  LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENISCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNK 359
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYI LMNK
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIRLMNK 358

[Close]

BLAST of Lsi05G007450 vs. NCBI nr
Match: XP_008456527.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0036503.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYJ99978.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 679.1 bits (1751), Expect = 2.2e-191
Identity = 332/359 (92.48%), Postives = 346/359 (96.38%), Query Frame = 0


Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MILQI RIPHRF+Q RAFVDAKVKWVRDPYLDFAVQREKNL+QVISLKNII SSPL S+P
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVK+TSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDL+VSELKKREYLEGN GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQ LPYISPYENAFHL PNSDQAEKWAVAVLHELLYL +SKKTEKENI+ LG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKV 360
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQY+HLMNKV
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKV 359

[Close]

BLAST of Lsi05G007450 vs. NCBI nr
Match: XP_038906250.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida])

HSP 1 Score: 677.9 bits (1748), Expect = 4.8e-191
Identity = 334/359 (93.04%), Postives = 345/359 (96.10%), Query Frame = 0


Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           M LQI RIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNII SSPLK LP
Sbjct: 1   MFLQITRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIVSSPLKFLP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LS+VSLLKQNLK+PTTTISKFFELYPSVFIQFQPS+G HPHVKLTSQALLLHKEESTIH 
Sbjct: 61  LSNVSLLKQNLKIPTTTISKFFELYPSVFIQFQPSVGFHPHVKLTSQALLLHKEESTIHI 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDDVVKRLAKLLMLTGAGKLPL +IERLQWDLGLPYRFIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYIIERLQWDLGLPYRFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           D LTGEQTLALELLSWRKDLSVSELK+RE LEGN+GSRNR+HIAF MSFPRGFDLQKKVM
Sbjct: 181 DYLTGEQTLALELLSWRKDLSVSELKRRECLEGNLGSRNRSHIAFRMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKWAVAVLHELLYLM+SKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMISKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKV 360
           GFGSR KKALVHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMG RHQY+HLMNKV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLIEKHPLMGTRHQYLHLMNKV 359

[Close]

BLAST of Lsi05G007450 vs. NCBI nr
Match: XP_022136370.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 645.2 bits (1663), Expect = 3.5e-181
Identity = 316/359 (88.02%), Postives = 335/359 (93.31%), Query Frame = 0


Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL+  RIP+R SQTR FVDAKVKWVRDPYLDFAVQREKNLRQVISLKN+I S+P KSLP
Sbjct: 1   MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTT+SKFF+LYPSVF QFQPS GLHP VKLT QAL LHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDDVVKRLAKLLMLTGAG+LPL VIERLQWDLGLPY+FIPTLLADYPEYFQVC+V+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALE+LSWRK+LS+SELK+RE  +GNV SR  NHIAFPMS P+GFD +KKVM
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW VAVLHELLYL+VSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKV 360
           GFGSR KKALVHHPGIFYVSNKIRTQTVVLREAY+KDFLVEKHPLMGMRHQYIHLMNKV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKV 359

[Close]

BLAST of Lsi05G007450 vs. NCBI nr
Match: KAG7031364.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 645.2 bits (1663), Expect = 3.5e-181
Identity = 317/358 (88.55%), Postives = 332/358 (92.74%), Query Frame = 0


Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL + R PHR  QTRAFVDAKVKWVRDPYLDF VQREKNLRQVISLKN+I SSP KS+P
Sbjct: 1   MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLKVPTT+ISKF +LYPSVFIQFQPSLGLHPHVKLTSQAL LHKEESTIHN
Sbjct: 61  LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LEGN   RN  HIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW  AVLHELLYLMVSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNK 359
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYIHLMNK
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNK 358

[Close]

BLAST of Lsi05G007450 vs. NCBI nr
Match: XP_022994938.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita maxima])

HSP 1 Score: 643.7 bits (1659), Expect = 1.0e-180
Identity = 313/358 (87.43%), Postives = 332/358 (92.74%), Query Frame = 0


Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL++ R PHR  QTRAFVDAKVKWVRDPYLDF VQREKNLRQVISLKN+I SSP KS+P
Sbjct: 1   MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLK PTT+ISKFF+LYPSVFIQFQPSLGLHPHVKLTSQ+L LHKEE TIHN
Sbjct: 61  LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDD+VKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIP LLADYPEYFQVCS++
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LEGN   RN NHIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW  AVLHELLYLMVSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNK 359
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYIHLMNK
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNK 358

[Close]

BLAST of Lsi05G007450 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 438.7 bits (1127), Expect = 4.6e-123
Identity = 226/354 (63.84%), Postives = 272/354 (76.84%), Query Frame = 0


Query: 7   RIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSL 66
           ++     Q R FV+A+VKWV D YLD AVQREKNL+QVISLK+ I SSP KSLPLSS+SL
Sbjct: 7   KLARALQQRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSL 66

Query: 67  LKQ--NLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPH 126
           LK   NL +   T + FF+ YPSVF  FQPS     HV+LT QAL LHKEE TIH S P 
Sbjct: 67  LKPLVNLHI---TAAAFFQKYPSVFTTFQPSPSHPLHVRLTPQALTLHKEEETIHLSPPQ 126

Query: 127 RDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLT 186
           R+  V+RL K LMLTGAG LPL V++R ++DLGLP  +I +L+ DYPEYF+V  +KD LT
Sbjct: 127 RNVTVQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLT 186

Query: 187 GEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVE 246
           GE+TLAL + S R +L VSE+++RE        +    I + M+FP+G++L K+V NWVE
Sbjct: 187 GEKTLALTISSRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVE 246

Query: 247 EWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGS 306
           +WQ LPYISPYENAFHL   SDQAEKWAVAVLHELL+L+VSKKTE +N+  LGEYLGFG 
Sbjct: 247 QWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGM 306

Query: 307 RLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNK 359
           R KKALVHHPGIFY+S+KIRTQTVVLREAY K FL+EKHPLMG+RHQYI+LM+K
Sbjct: 307 RFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSK 357

[Close]

BLAST of Lsi05G007450 vs. TAIR 10
Match: AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 311.2 bits (796), Expect = 1.1e-84
Identity = 159/358 (44.41%), Postives = 239/358 (66.76%), Query Frame = 0


Query: 10  HRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQ 69
           HR     + V+   K+VRD  LD AV+REKNLR ++S+K++I S P KS+P+S ++  K 
Sbjct: 16  HRTFADTSAVEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKD 75

Query: 70  NLKVPTTTISKFFELYPSVFIQFQP-SLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDV 129
           +L+VP   I +F   +PSVF +F P  +G+HPH+ LT + L    +E  ++ S+ ++  +
Sbjct: 76  SLRVPLRPI-EFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGL 135

Query: 130 VKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQT 189
             RL KLLM+    K+PL +++ L+WDLGLP  ++ T++ ++P+YF+V  +K  L G  +
Sbjct: 136 ADRLLKLLMINRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRV--IKSKLRG-CS 195

Query: 190 LALELLSWRKDLSVSELKKR-------EYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMN 249
             LEL+ W  + +VS L+K+       EY +G+        IAFPM F  GF + KK+  
Sbjct: 196 GELELVCWSNEHAVSVLEKKARTLRKGEYTKGSA-------IAFPMKFSNGFVVDKKMKK 255

Query: 250 WVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLG 309
           W+++WQ+LPYISPYENA HL   SD+++KWA AVLHE++ L VSKK EK+ I +LGE++G
Sbjct: 256 WIDDWQKLPYISPYENALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMG 315

Query: 310 FGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKV 360
             SR K+ L +HPGIFY+S+K+RT TVVLR+ YK+  L+E + L+  R++Y+ LMN V
Sbjct: 316 LRSRFKRVLHNHPGIFYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTV 362

[Close]

BLAST of Lsi05G007450 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 249.6 bits (636), Expect = 4.0e-66
Identity = 142/351 (40.46%), Postives = 215/351 (61.25%), Query Frame = 0


Query: 12  FSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNL 71
           + Q    V+ K+KWV+D  LD  V REK+LR V +L ++I++SP   LP+  +   +  L
Sbjct: 26  YQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQL 85

Query: 72  KVP-TTTISKFFELYPSVFIQ--FQPSLGLH-PHVKLTSQALLLHKEESTIHNSQPHRDD 131
            +P    +S F   YP++F++  +  S G   P   LT + + L+ EE  +  S+ +  D
Sbjct: 86  GLPQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDV--SRVNERD 145

Query: 132 VVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQ 191
           V+ RL KLLMLT    L L+ I+ L+WDLGLPY +  +L+  +P+ F +  +   L G  
Sbjct: 146 VLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG-- 205

Query: 192 TLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEWQ 251
              L+L+ W + L+VS+++ RE    +VG  N   +AFP+ F RGF L++K + W++EWQ
Sbjct: 206 ---LKLIHWDEHLAVSQMQLRE----DVG--NDERMAFPVKFTRGFGLKRKSIEWLQEWQ 265

Query: 252 RLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLK 311
           RLPY SPY +A HL P +D +EK  V V HELL+L + KKTE++N+  L +      +  
Sbjct: 266 RLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFT 325

Query: 312 KALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNK 359
           K    HPGIFY+S K  TQTV+LREAY +  L+EKHPL+ +R ++ ++MN+
Sbjct: 326 KVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNE 363

[Close]

BLAST of Lsi05G007450 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 218.8 bits (556), Expect = 7.5e-57
Identity = 131/367 (35.69%), Postives = 204/367 (55.59%), Query Frame = 0


Query: 2   ILQIIRIPHRFSQTR---AFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKS 61
           +  + ++ H+  Q R   A    ++KWV++  LD  +  E +L+    LK+ I  SP   
Sbjct: 9   LFSVSKLFHQHQQWRGMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGF 68

Query: 62  LPLSSVSLLKQNLKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKLTSQALLLHKEEST 121
           L   SV+  ++ L + T  + +F   YP++F +F        P  KLT  AL+L  +E  
Sbjct: 69  LTAKSVADWQKLLGL-TVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEI 128

Query: 122 IHNSQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVC 181
           IH  Q H  D V+RL ++LM+  +  + L  +  L++DLGLP  +  TL+  YP++F  C
Sbjct: 129 IH--QSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF--C 188

Query: 182 SVKDCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVG--------SRNRNHIAFPMSF 241
            VK          L+L+ WR + + S L+KR       G         R ++ + FPMSF
Sbjct: 189 FVK---ASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSF 248

Query: 242 PRGFDLQKKVMNWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTE 301
           PRG+  QKKV  W++E+Q+LPYISPY++  ++ P SD  EK AVAVLHELL L + KKT+
Sbjct: 249 PRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTK 308

Query: 302 KENIFYLGEYLGFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMR 357
           +  +  +   L    +  +    +PGIFY+S K +T TV+L+E Y++  LV+ HPL  +R
Sbjct: 309 RNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLR 367

[Close]

BLAST of Lsi05G007450 vs. TAIR 10
Match: AT3G58520.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 206.5 bits (524), Expect = 3.8e-53
Identity = 126/367 (34.33%), Postives = 199/367 (54.22%), Query Frame = 0


Query: 2   ILQIIRIPHRFSQTR---AFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKS 61
           +  + ++ H+  Q R   A    ++KWV++  LD  +  E +L+    LK+ I  SP   
Sbjct: 9   LFSVSKLFHQHQQWRGMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSP--- 68

Query: 62  LPLSSVSLLKQNLKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKLTSQALLLHKEEST 121
               +   +++N          + + YP++F +F        P  KLT  AL+L  +E  
Sbjct: 69  ----TGITIRENFN------CYWNKRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEI 128

Query: 122 IHNSQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVC 181
           IH  Q H  D V+RL ++LM+  +  + L  +  L++DLGLP  +  TL+  YP++F  C
Sbjct: 129 IH--QSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF--C 188

Query: 182 SVKDCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVG--------SRNRNHIAFPMSF 241
            VK          L+L+ WR + + S L+KR       G         R ++ + FPMSF
Sbjct: 189 FVK---ASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSF 248

Query: 242 PRGFDLQKKVMNWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTE 301
           PRG+  QKKV  W++E+Q+LPYISPY++  ++ P SD  EK AVAVLHELL L + KKT+
Sbjct: 249 PRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTK 308

Query: 302 KENIFYLGEYLGFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMR 357
           +  +  +   L    +  +    +PGIFY+S K +T TV+L+E Y++  LV+ HPL  +R
Sbjct: 309 RNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLR 355

The following BLAST results are available for this feature:

BLAST of Lsi05G007450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ6	3.5e-51	35.71	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]
A0MFS5	4.6e-35	32.74	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
B6TTV8	1.1e-33	30.97	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q65XL5	1.3e-32	30.77	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
Q689D6	1.7e-29	28.61	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]

BLAST of Lsi05G007450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0U1	1.1e-191	92.48	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C4Q9	1.1e-191	92.48	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4...	[more]
A0A6J1C3P8	1.7e-181	88.02	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110080...	[more]
A0A6J1K6G9	4.9e-181	87.43	protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV...	[more]
A0A6J1FNW3	3.5e-179	87.71	protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 ...	[more]

BLAST of Lsi05G007450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456527.1	2.2e-191	92.48	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0036503.1 prot...	[more]
XP_038906250.1	4.8e-191	93.04	protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida]	[more]
XP_022136370.1	3.5e-181	88.02	protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]	[more]
KAG7031364.1	3.5e-181	88.55	Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022994938.1	1.0e-180	87.43	protein WHAT'S THIS FACTOR 1 [Cucurbita maxima]	[more]

BLAST of Lsi05G007450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24320.1	4.6e-123	63.84	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT1G71850.1	1.1e-84	44.41	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	4.0e-66	40.46	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.1	7.5e-57	35.69	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.2	3.8e-53	34.33	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 26..358 e-value: 1.2E-111 score: 372.7
None	No IPR available	PANTHER	PTHR31476:SF19	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN	coord: 4..362
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 4..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G007450.1	Lsi05G007450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding