Homology
BLAST of Lsi05G005200 vs. ExPASy Swiss-Prot
Match:
Q9SJ41 (Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=At2g05160 PE=2 SV=1)
HSP 1 Score: 345.1 bits (884), Expect = 1.5e-93
Identity = 238/588 (40.48%), Postives = 329/588 (55.95%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLL-HDHGDQEMARLALGPDSHIQEVVMLAKT 62
M F+E VV RI +++PEN KI G+LLL ++G+++M RLA PDS + V+ K
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 63 EL----HQLRSMPSPVSPLSPSPSPSQGGFI---PFSIRTRQFSTSPPN----WEQQQLT 122
EL H S PS P+P G F P S+ S SPP WE
Sbjct: 61 ELARNSHHYHSPPS-----DHIPTPKFGSFTGSSPLSV-----SVSPPMKTGFWENS--- 120
Query: 123 NKPTPDYLSLGYPDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTR 182
M LQN QF +D P S F + + R +R
Sbjct: 121 -------------TEMDTLQNNLQFLNFED---PLTS--PEFSNGFFSQERQCLPLRTSR 180
Query: 183 HYSNVPEFQPRTCHYYNKGFCKHGNSCRYLHSNLVP--GSLSQMYNTHSNVND-DHVFQP 242
++PEF + CHY+NKGFCKHGN+CRY H ++P S +QM+N ++N++D +HV P
Sbjct: 181 RSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVSP 240
Query: 243 GSLERLEFEIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTK 302
SLE+LE EI+ELLK RRG+PISIASLPM+YYEKYG+ LQAEGYLTESQRHGK+G+SLTK
Sbjct: 241 VSLEKLEGEIIELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTK 300
Query: 303 LLTRLKTSIQVIDRPHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSW 362
LL RLK +I+++DRPHGQH+VILAEDA KF++Y ++N+ G I A +Y A S
Sbjct: 301 LLARLKNTIRLVDRPHGQHSVILAEDASKFVEYTGERNEHGAIL-AGSRQIYLTFPAESS 360
Query: 363 LIPVSICIYLTLFVCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLI 422
+ IY T YG VEDVRIPCQQ+RM+GFVTF S ETVK IL+ + H I
Sbjct: 361 FTEHDVSIYFT--------SYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFI 420
Query: 423 CGARVLVKPYREKSKLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYDFSPTMLR 482
C ARVLVKPYREKS+ +Y + + + S + + E ++++P S M +
Sbjct: 421 CNARVLVKPYREKSR--SSRYLDNYKPLHGMRYGSKFIERDIE-MNTLPPRVSESSRMRK 480
Query: 483 LRMEEQQQQQQQQHALERSLSEMTLIQKSVGNQPYFSYQMNELKLPV-PEATERFDHLMD 542
+ E +Q ++ +SL N Y + ++ KL E E+ + L
Sbjct: 481 PFLSEPEQ------SVSKSLPT---------NYSYLGFSSDDFKLTSNAEQEEQAERLSY 522
Query: 543 ILNVLNSGSGSSSSSSSITDDNKQPRNVTDWNHIELNLESEGYNLPES 575
+L+ LN+ + +++ D++++ H E +L+S+ NLPES
Sbjct: 541 LLDYLNTEDNVMNITTNYRDNDRR-------THCE-SLDSQVLNLPES 522
BLAST of Lsi05G005200 vs. ExPASy Swiss-Prot
Match:
Q6ZK57 (Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0126700 PE=2 SV=2)
HSP 1 Score: 238.8 bits (608), Expect = 1.5e-61
Identity = 198/636 (31.13%), Postives = 295/636 (46.38%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
ME E ++ F R+ +++PE+V KI G +LL + + E+ +LA GP++ + + K
Sbjct: 50 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 109
Query: 63 LHQLRSMPS------------------------PVSPLSPSPSPSQGGF----------- 122
L + + S P S P P+ GG
Sbjct: 110 LTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAA 169
Query: 123 --IPFSIRTRQF----STSPPNWEQQQLTNKPTPDYLSLGYPDSMYELQ----------- 182
+ +++ Q+ +PP QQ P + + Y L+
Sbjct: 170 AAFGYQVQSPQYWPDSPPAPPTKAAQQ--EFAPPGLVVDASAEGPYPLRGGQHVLDDNNF 229
Query: 183 NPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTRHYSNVPEFQPRTCHYYNKGF 242
++ + P+ G + A N STR R CHY++KG
Sbjct: 230 GGGYYYPAGEDAFPNGGGGGGGSPARARRS-NGLSTR-------------RPCHYFSKGI 289
Query: 243 CKHGNSCRYLHSNLVPGSLS-QMYNTHSNVNDDHVFQPGSLERLEFEIVELLKSRRGSPI 302
CK+G +C Y H + +L+ N + PGSLE LE EI ELL SRRG P+
Sbjct: 290 CKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITELLNSRRGQPV 349
Query: 303 SIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDRPHGQHAVI 362
SIASLP +Y EKYGK LQA+GYLTESQRHGK+G+SLT+LL+RL I+VI+RPHGQH+V+
Sbjct: 350 SIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRL-NKIRVIERPHGQHSVV 409
Query: 363 LAEDAPKFMDYR----KDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLFVCDCS 422
LAEDA K+MD+R D G + + + +Y A S + Y
Sbjct: 410 LAEDAAKYMDFRGGGGGGGGDTGSVPASSHQ-IYLTFPAESTFAEDDVANYFG------- 469
Query: 423 VHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKSKLLE 482
YG V DVRIPCQ+RRMFGFV+F S ETV IL + H ICG+RVLVKPYREKSK ++
Sbjct: 470 -QYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVD 529
Query: 483 RKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYDFSPTMLRLRMEEQQQQQQQQHALER 542
R + +N++S + PR ++F + + + ++Q
Sbjct: 530 R---------------TCVDNIKSMVPYCPPRFFEFDQELYTAEYDASRLMRKQLAEKRE 589
Query: 543 SLSEM----TLIQKSVGNQPYFSYQMNELKLPVP-----EATERFDHL------MDILNV 567
L EM +++ P F+Y ++ P + +++ D + D L +
Sbjct: 590 MLLEMERRRATVRRLESMPPQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPDPLEI 637
BLAST of Lsi05G005200 vs. ExPASy Swiss-Prot
Match:
Q84ZT0 (Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0583300 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 8.4e-36
Identity = 125/368 (33.97%), Postives = 185/368 (50.27%), Query Frame = 0
Query: 80 PSPSQGGFIPFSI---RTRQFSTSPPNWEQQQLTNKPTPDYLSLGYPDSMYELQNPAQFF 139
PS + GG+I + + RQ++ SP + + P P L + Q+ +
Sbjct: 62 PSRANGGYILSTSSYPQIRQYAASPDEHLRSLPSLLPPPPGQELPLAYLRAQRQSSGNYR 121
Query: 140 CLDDHIEPSNSGLSSFDCSYAEN-----DLNSFS-TRNT--------RHYSNVPEFQPRT 199
+ P + S+ E+ +L S S RN+ H + + +
Sbjct: 122 GIQAQRRPLIDQTGALQSSFPESICLKEELQSLSMPRNSPNAGRNLVGHPHSSSKSSSKP 181
Query: 200 CHY-YNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVELL 259
CH+ + +G+CK G +C++ H GS+ +++N V SL +L+ EI ELL
Sbjct: 182 CHFHFFRGYCKKGVNCQFFH-----GSVPELHNPR------QVHPFASLSKLDMEIRELL 241
Query: 260 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDR 319
P+++ LP +Y+EKYGK L+ +G+LTESQ+HG++G SLT LL L T I+V++R
Sbjct: 242 IG-IPPPVAVDRLPSMYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGLNT-IRVVER 301
Query: 320 PHGQHAVILAEDA-PKFMD-----YRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICI 379
HGQ+ V+L EDA K+MD + + D G +N Y H S +
Sbjct: 302 EHGQYHVVLVEDARKKYMDCLGLAHSCNLMDTGTGSNQIYMTFPVH----SKFTDDDVEN 361
Query: 380 YLTLFVCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVK 424
Y F G V VRIP Q++RMFGFV+F ETV+LILS + H ICG RVLVK
Sbjct: 362 YFKQF--------GPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVLVK 404
BLAST of Lsi05G005200 vs. ExPASy Swiss-Prot
Match:
Q9SV09 (Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN=At3g51950 PE=1 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 6.2e-31
Identity = 130/426 (30.52%), Postives = 183/426 (42.96%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
M+ E TR+V RI +DPEN KI+G LLL DHG++EM RLA GP++ + V++ AK E
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 63 LHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGY 122
L + S SP Q I SP N L P Y + G
Sbjct: 61 LGLMN--------CSRSPWSHQDELI-----------SPKNNRGSSLNPASLPFYANGG- 120
Query: 123 PDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLN--SFSTRNTRHYSNVPEFQP 182
S +L N F +DD S L S L+ + + + VP
Sbjct: 121 -RSSRDLTN--DFELMDDMNSRSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVP---- 180
Query: 183 RTCHYYNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVEL 242
C Y+ +GFCK+G SCR++HS D GS R +EL
Sbjct: 181 --CSYFARGFCKNGASCRFVHS------------------DGGADLVGSPSR-----IEL 240
Query: 243 LKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVID 302
L+S P A ++T S SL T+ ++Q D
Sbjct: 241 LRSNSVPP-----------------RLAHHFMTRS--------SLPSFSTK-GVNLQQND 300
Query: 303 RPHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLF 362
A+++ ++ K +R ++ D +A +Y A S + Y + F
Sbjct: 301 VQRAAAALMIGDELQKLGRWRPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFSTF 340
Query: 363 VCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREK 422
G V+DVRIP QQ+RMFGFVTF ETVK IL+ + H +C +RVLVKPY+EK
Sbjct: 361 --------GPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEK 340
Query: 423 SKLLER 427
K+ ++
Sbjct: 421 GKVPDK 340
BLAST of Lsi05G005200 vs. ExPASy Swiss-Prot
Match:
Q10LZ9 (Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0329200 PE=2 SV=1)
HSP 1 Score: 135.6 bits (340), Expect = 1.8e-30
Identity = 158/550 (28.73%), Postives = 228/550 (41.45%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
M+ E T+VVF RI +DP++ KI+G LL+ DHGD+EM RLA GP++ + V+ A+ E
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 63 LHQL---------RSMPSPVSPL---------SPSPSPS---------------QGGFIP 122
L L ++P+ SP P+PSPS GG
Sbjct: 61 LALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSNSMGNGGAAD 120
Query: 123 FSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGYPDSMYELQNPAQFFCLDDHIEPSNSG- 182
+ + SP N N P + G + + + Q L D N G
Sbjct: 121 EMVGAGEELMSPLNGGGGAAAN--APPFFPRGGDALLDDFELQEQLAFLHDGAGGVNPGH 180
Query: 183 -LSSFDCSYAENDLNSFS-------------TRNTRHYSNVPE-------FQPRTCHYYN 242
L +FD + + S R ++V E F + C YY
Sbjct: 181 ALQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNELCLGGDGFGWKPCLYYA 240
Query: 243 KGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVEL-LKSRRG 302
+GFCK+G++CR++H L +DD + E+ + + L KS+R
Sbjct: 241 RGFCKNGSTCRFVHGGL---------------SDDAAMDATTAEQQQCQDFLLRSKSQRL 300
Query: 303 SPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDRPHGQH 362
P + P G L S SL L+ Q D
Sbjct: 301 GPAAFPFTP-------------TGSLPASPSATSKCLSLL-----LQQQQQHNDNQRAAA 360
Query: 363 AVIL---AEDAPKFMDY-RKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLFVC 422
A ++ ++A KFM R D+ D + N +Y A S + Y ++
Sbjct: 361 AALMLAGGDEAHKFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSI--- 420
Query: 423 DCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKSK 482
YG V DVRIP QQ+RMFGFVTF ETVKLIL+ + H IC ARVLVKPY+EK K
Sbjct: 421 -----YGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGK 480
Query: 483 LLERKYHERIEQQQQDYFSSHYNNLESEQ--------LHSIPRGYDFSPTMLRLRMEEQQ 485
+ + KY +QQQ D+ L++ + + MLR ++EEQQ
Sbjct: 481 VPD-KYR---KQQQGDFCCMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQ 503
BLAST of Lsi05G005200 vs. ExPASy TrEMBL
Match:
A0A0A0L4W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061520 PE=4 SV=1)
HSP 1 Score: 895.6 bits (2313), Expect = 1.1e-256
Identity = 466/576 (80.90%), Postives = 501/576 (86.98%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
MEFS +TR VFHRI++IDP+NV KIIGFLLLHD+GDQEMARLAL +SHI++VVMLAKTE
Sbjct: 36 MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 95
Query: 63 LHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGY 122
LHQLRSMP PVSPL +IR RQ STSPP WEQQQLTNK TPDY+SLGY
Sbjct: 96 LHQLRSMPVPVSPL--------------AIRNRQPSTSPPGWEQQQLTNKHTPDYISLGY 155
Query: 123 PD-SMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTRHYSNVPEFQPR 182
D SMY+LQN A FCL+DH+E SNSGLSSFDCSYA+N LNSFSTRNTRHYSNVP+FQPR
Sbjct: 156 HDSSMYDLQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPR 215
Query: 183 TCHYYNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVELL 242
TCHYYNKGFCKHGNSCRYLHSNLVPGSLS +YNT+SNVNDDHVF+PGSLERLEFEIVELL
Sbjct: 216 TCHYYNKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELL 275
Query: 243 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDR 302
KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK SIQVIDR
Sbjct: 276 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDR 335
Query: 303 PHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLFV 362
PHGQHAVILAEDAPKFMD+RKD+NDPGPI ++ +Y A S + Y
Sbjct: 336 PHGQHAVILAEDAPKFMDHRKDRNDPGPIVSSARQ-IYMTFPADSTFTEDDVSDYF---- 395
Query: 363 CDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKS 422
SVHYG+VEDVRIPCQQRRMFGFVTFHS+ETVKLILSDDSEHLICGARVLVKPYREKS
Sbjct: 396 ---SVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKS 455
Query: 423 KLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYDFSPTMLRLRMEEQQQQQQQQH 482
KLLERKY ERIEQQ QDYF+SHYN+LESEQLHSI RGYDF PTMLRLRMEEQQQQQ++
Sbjct: 456 KLLERKYQERIEQQHQDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRE-- 515
Query: 483 ALERSLSEMTLIQKSVGNQPYFSYQMNELKLPVPEATERFDHLMDILNVLNSGSGSSSSS 542
LERSLSEMTL+QKSV NQPYFSYQMNELK+PVPEATE F+HLMDILNVLNSGS SSSSS
Sbjct: 516 -LERSLSEMTLVQKSVVNQPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSS 575
Query: 543 SSITDDNKQ---PRNVTDWNHIELNLESEGYNLPES 575
TDDNKQ P+NVTDWNH+ELNLESEGYNLPES
Sbjct: 576 ---TDDNKQQPHPQNVTDWNHMELNLESEGYNLPES 583
BLAST of Lsi05G005200 vs. ExPASy TrEMBL
Match:
A0A5D3BC66 (Zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001530 PE=4 SV=1)
HSP 1 Score: 862.8 bits (2228), Expect = 7.9e-247
Identity = 455/587 (77.51%), Postives = 491/587 (83.65%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
MEFS +T+ VFHRI +IDP+NV KIIGFLLLHD GDQEMARLAL +SHI++VVMLAKTE
Sbjct: 1 MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60
Query: 63 LHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGY 122
LHQ RSMP PVSPL +IR RQ STSPP WEQQQLTNK TPDY+ LGY
Sbjct: 61 LHQRRSMPVPVSPL--------------AIRNRQSSTSPPGWEQQQLTNKHTPDYIPLGY 120
Query: 123 PDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTRHYSNVPEFQPRT 182
DSMY++QN FCL+DH+E S LSSFDCSYAEN +NSFSTRNTRHYSNVP+FQPRT
Sbjct: 121 HDSMYDIQNSVNLFCLEDHLEQS---LSSFDCSYAENVMNSFSTRNTRHYSNVPDFQPRT 180
Query: 183 CHYYNKGFCKHGNSCRYLHS-NLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVELL 242
CHYYNKGFCKHGNSCRYLHS NL+PGSLS +YN++SNVNDDHVF+PGSLERLEFEIVELL
Sbjct: 181 CHYYNKGFCKHGNSCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEFEIVELL 240
Query: 243 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDR 302
KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDR
Sbjct: 241 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDR 300
Query: 303 PHGQHAVILAEDAPKFMDYRKDKNDPGPIANAK---------------------YACVYW 362
PHGQHAVILAEDAPKFMD+RKD+NDPG I ++ + +
Sbjct: 301 PHGQHAVILAEDAPKFMDHRKDRNDPGSIVSSARQIYMTFPADSTFTEDDVSDYFRQMLN 360
Query: 363 HCIALSWLIPVSICIYLTLFVCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILS 422
CI L L+ I L L +CDCSVHYG+VEDVRIPCQQRRMFGFVTFHSIETVKLILS
Sbjct: 361 ACICLGLLMFQFAHIDLILIMCDCSVHYGMVEDVRIPCQQRRMFGFVTFHSIETVKLILS 420
Query: 423 DDSEHLICGARVLVKPYREKSKLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYD 482
DDSEHLICGARVLVKPYREKSKLLERKY ERIE QQQDYF+ HYNNLESEQLHSI RGYD
Sbjct: 421 DDSEHLICGARVLVKPYREKSKLLERKYQERIE-QQQDYFAPHYNNLESEQLHSIARGYD 480
Query: 483 FSPTMLRLRMEEQQQQQQQQHALERSLSEMTLIQKSVGNQPYFSYQMNELKLPVPEATER 542
F PTMLRLRMEEQQQQQQ+ ALERSLSEMTL+QKSV NQPYFSYQMNELKLPVPE TE
Sbjct: 481 FPPTMLRLRMEEQQQQQQR--ALERSLSEMTLVQKSVVNQPYFSYQMNELKLPVPEDTES 540
Query: 543 FDHLMDILNVLNSGSGSSSSSSSITDDNK--QPRNVTDWNHIELNLE 566
FDHLMDILNVLNSG+ SSSSS TDDNK QP+N+TDWNHIELNLE
Sbjct: 541 FDHLMDILNVLNSGTNSSSSS---TDDNKQPQPQNMTDWNHIELNLE 564
BLAST of Lsi05G005200 vs. ExPASy TrEMBL
Match:
A0A5A7VHD9 (Zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00570 PE=4 SV=1)
HSP 1 Score: 852.4 bits (2201), Expect = 1.1e-243
Identity = 449/566 (79.33%), Postives = 483/566 (85.34%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
MEFS +T+ VFHRI +IDP+NV KIIGFLLLHD GDQEMARLAL +SHI++VVMLAKTE
Sbjct: 1 MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60
Query: 63 LHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGY 122
LHQ RSMP PVSPL +IR RQ STSPP WEQQQLTNK TPDY+ LGY
Sbjct: 61 LHQRRSMPVPVSPL--------------AIRNRQSSTSPPGWEQQQLTNKHTPDYIPLGY 120
Query: 123 PDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTRHYSNVPEFQPRT 182
DSMY++QN FCL+DH+E S LSSFDCSYAEN +NSFSTRNTRHYSNVP+FQPRT
Sbjct: 121 HDSMYDIQNSVNLFCLEDHLEQS---LSSFDCSYAENVMNSFSTRNTRHYSNVPDFQPRT 180
Query: 183 CHYYNKGFCKHGNSCRYLHS-NLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVELL 242
CHYYNKGFCKHGNSCRYLHS NL+PGSLS +YN++SNVNDDHVF+PGSLERLEFEIVELL
Sbjct: 181 CHYYNKGFCKHGNSCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEFEIVELL 240
Query: 243 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDR 302
KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDR
Sbjct: 241 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDR 300
Query: 303 PHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLFV 362
PHGQHAVILAEDAPKFMD+RKD+NDPG I ++ +Y A S + Y
Sbjct: 301 PHGQHAVILAEDAPKFMDHRKDRNDPGSIVSSARQ-IYMTFPADSTFTEDDVSDYF---- 360
Query: 363 CDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKS 422
SVHYG+VEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKS
Sbjct: 361 ---SVHYGMVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKS 420
Query: 423 KLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYDFSPTMLRLRMEEQQQQQQQQH 482
KLLERKY ERIE QQQDYF+ HYNNLESEQLHSI RGYDF PTMLRLRMEEQQQQQQ+
Sbjct: 421 KLLERKYQERIE-QQQDYFAPHYNNLESEQLHSIARGYDFPPTMLRLRMEEQQQQQQR-- 480
Query: 483 ALERSLSEMTLIQKSVGNQPYFSYQMNELKLPVPEATERFDHLMDILNVLNSGSGSSSSS 542
ALERSLSEMTL+QKSV NQPYFSYQMNELKLPVPE TE FDHLMDILNVLNSG+ SSSSS
Sbjct: 481 ALERSLSEMTLVQKSVVNQPYFSYQMNELKLPVPEDTESFDHLMDILNVLNSGTNSSSSS 535
Query: 543 SSITDDNK--QPRNVTDWNHIELNLE 566
TDDNK QP+N+TDWNHIELNLE
Sbjct: 541 ---TDDNKQPQPQNMTDWNHIELNLE 535
BLAST of Lsi05G005200 vs. ExPASy TrEMBL
Match:
A0A1S3BL77 (zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo OX=3656 GN=LOC103491050 PE=4 SV=1)
HSP 1 Score: 848.2 bits (2190), Expect = 2.0e-242
Identity = 449/566 (79.33%), Postives = 483/566 (85.34%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
MEFS +T+ VFHRI +IDP+NV KIIGFLLLHD GDQEMARLAL +SHI++VVMLAKTE
Sbjct: 1 MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60
Query: 63 LHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGY 122
LHQ RSMP PVSPL +IR RQ STSPP WEQQQLTNK TPDY+ LGY
Sbjct: 61 LHQRRSMPVPVSPL--------------AIRNRQSSTSPPGWEQQQLTNKHTPDYIPLGY 120
Query: 123 PDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTRHYSNVPEFQPRT 182
DSMY++QN FCL+DH+E S LSSFDCSYAEN +NSFSTRNTRHYSNVP+FQPRT
Sbjct: 121 HDSMYDIQNSVNLFCLEDHLEQS---LSSFDCSYAENVINSFSTRNTRHYSNVPDFQPRT 180
Query: 183 CHYYNKGFCKHGNSCRYLHS-NLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVELL 242
CHYYNKGFCKHGNSCRYLHS NL+PGSLS +YN++SNVNDDHVF+PGSLERLEFEIVELL
Sbjct: 181 CHYYNKGFCKHGNSCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEFEIVELL 240
Query: 243 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDR 302
KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDR
Sbjct: 241 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDR 300
Query: 303 PHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLFV 362
PHGQHAVILAEDAPKFMD+RKD+NDPG I ++ +Y A S + Y
Sbjct: 301 PHGQHAVILAEDAPKFMDHRKDRNDPGSIVSSARQ-IYMTFPADSTFTEDDVSDYF---- 360
Query: 363 CDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKS 422
SVHYG+VEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKS
Sbjct: 361 ---SVHYGMVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKS 420
Query: 423 KLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYDFSPTMLRLRMEEQQQQQQQQH 482
KLLERKY ERIE QQQDYF SHYNNLESEQLHSI RGYDF PTMLRLRMEEQQQQQQ+
Sbjct: 421 KLLERKYQERIE-QQQDYF-SHYNNLESEQLHSIARGYDFPPTMLRLRMEEQQQQQQR-- 480
Query: 483 ALERSLSEMTLIQKSVGNQPYFSYQMNELKLPVPEATERFDHLMDILNVLNSGSGSSSSS 542
ALERSLSEMTL+QKSV NQPYFSYQMNELKLPVPE TE FDHLMDILNVLNSG+ SSSSS
Sbjct: 481 ALERSLSEMTLVQKSVVNQPYFSYQMNELKLPVPEDTESFDHLMDILNVLNSGTNSSSSS 534
Query: 543 SSITDDNK--QPRNVTDWNHIELNLE 566
TDDNK QP+N+TDWNHIELNL+
Sbjct: 541 ---TDDNKQPQPQNMTDWNHIELNLQ 534
BLAST of Lsi05G005200 vs. ExPASy TrEMBL
Match:
A0A6J1L8K9 (zinc finger CCCH domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111500284 PE=4 SV=1)
HSP 1 Score: 720.3 bits (1858), Expect = 6.3e-204
Identity = 400/581 (68.85%), Postives = 444/581 (76.42%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
MEFSEY R+VFHRISKIDPENV+ II F+LLHDH DQEMARLAL PD HIQ+VV L K +
Sbjct: 1 MEFSEYRRIVFHRISKIDPENVEDIICFILLHDHYDQEMARLALAPDHHIQQVVHLVKIQ 60
Query: 63 LH--QLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSL 122
LH LRSMP+P SP PS S G F+PFSIR ++ L
Sbjct: 61 LHLLALRSMPAP----SPPPSSSPGAFVPFSIR---------------------DSHMPL 120
Query: 123 GYPDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAEND--LNSFSTRNTRHYSNVPEF 182
YPDSMYELQNPAQFFCLDD IEPSN GLSS+DCSY EN +N FS+R RHYS + E+
Sbjct: 121 VYPDSMYELQNPAQFFCLDDCIEPSNRGLSSYDCSYVENAAMVNKFSSRTARHYSTMVEY 180
Query: 183 QPRTCHYYNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIV 242
QPRTCHYY+KG CKHGNSCRYLHSN +PGS SQMY NVNDDHVF+PGSLERLEFEIV
Sbjct: 181 QPRTCHYYSKGNCKHGNSCRYLHSNQMPGSFSQMY----NVNDDHVFRPGSLERLEFEIV 240
Query: 243 ELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQV 302
ELL+SRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQV
Sbjct: 241 ELLRSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQV 300
Query: 303 IDRPHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLT 362
IDRPHGQH+VILAEDA KF+D+RKDKN+ P ++ +Y A S + Y
Sbjct: 301 IDRPHGQHSVILAEDALKFIDHRKDKNNTSPTVSSARQ-IYMTFPADSSFTEDDVSDYF- 360
Query: 363 LFVCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYR 422
S+HYGLVEDVRIPCQQRRMFGFVTFHS+ETVKLILS+DSEHLICGARVLVKPYR
Sbjct: 361 ------SIHYGLVEDVRIPCQQRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYR 420
Query: 423 EKSKLLERKYHERIEQQQQD-YFSSHYNNLESEQLHSIPRGYDFSPTMLRLRMEEQQQQQ 482
EKSKLLERK +RIEQQQQ YFSSHYN+LE EQLHS YD + T+LRLR+EE Q
Sbjct: 421 EKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHS---NYDSASTILRLRIEE----Q 480
Query: 483 QQQHAL--ERSLSEMTLIQKSVGNQPYFSYQMNELKLPVPEATERFDHLMDILNVLNS-G 542
QQQHAL ERS SEMTL+ KS N YFSYQM EL+LPVPE E FD +M+I+ + G
Sbjct: 481 QQQHALEVERSFSEMTLMPKSATNCSYFSYQMKELRLPVPE--ESFDRMMNIMKSFSGPG 535
Query: 543 SGSSSSSSSITDDNKQPRNVTDWNHIELNLE-SEGYNLPES 575
SGSSS SSI D+ K P N WNH ELNL+ SEGYNLP+S
Sbjct: 541 SGSSSGCSSIVDEQKPPGNAAAWNHPELNLDNSEGYNLPDS 535
BLAST of Lsi05G005200 vs. NCBI nr
Match:
XP_038905763.1 (zinc finger CCCH domain-containing protein 18-like isoform X1 [Benincasa hispida])
HSP 1 Score: 936.0 bits (2418), Expect = 1.5e-268
Identity = 489/576 (84.90%), Postives = 510/576 (88.54%), Query Frame = 0
Query: 1 MHMEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAK 60
MHMEFS+YTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEV+MLAK
Sbjct: 12 MHMEFSDYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVIMLAK 71
Query: 61 TELHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSL 120
ELHQLRSMP+PVSP PS SPS GGFI +IR RQFSTSPP WEQ QLTNKPTPDY+ L
Sbjct: 72 NELHQLRSMPAPVSP--PSLSPSHGGFISSAIRNRQFSTSPPGWEQPQLTNKPTPDYIPL 131
Query: 121 GYPDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAEND--LNSFSTRNTRHYSNVPEF 180
Y DSMYEL NP FFCLDDH+EPSNSGLSSFDC Y EN +NSF TRNTRHYSNVPEF
Sbjct: 132 SYSDSMYELHNP-HFFCLDDHMEPSNSGLSSFDCRYVENAAMVNSFITRNTRHYSNVPEF 191
Query: 181 QPRTCHYYNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIV 240
QPRTCHY+NKGFCKHG+SCRYLHS GSL YN++SNVNDDHVF+PGSLERLEFEIV
Sbjct: 192 QPRTCHYFNKGFCKHGSSCRYLHS----GSL---YNSNSNVNDDHVFRPGSLERLEFEIV 251
Query: 241 ELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQV 300
ELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQV
Sbjct: 252 ELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQV 311
Query: 301 IDRPHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLT 360
IDRPHGQHAVILAEDAPKFMD+RKDKNDPGPI ++ +Y A S + Y
Sbjct: 312 IDRPHGQHAVILAEDAPKFMDHRKDKNDPGPIVSSARQ-IYMTFPADSTFTEDDVSDYF- 371
Query: 361 LFVCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYR 420
SVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYR
Sbjct: 372 ------SVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYR 431
Query: 421 EKSKLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYDFSPTMLRLRMEEQQQQQQ 480
EKSKLLERKY ERIEQQ QDYFSS YNNLE EQLH I RGYDFSPTMLRLRMEEQQQ+QQ
Sbjct: 432 EKSKLLERKYQERIEQQNQDYFSSRYNNLEPEQLHLIARGYDFSPTMLRLRMEEQQQRQQ 491
Query: 481 QQHALERSLSEMTLIQKSVGNQPYFSYQMNELKLPVPEATERFDHLMDILNVLNSGSGSS 540
QQHALERSLSEMTLIQKSV NQPYFSYQMNELKLPVPE ERFDHLMDILNVL SGSGSS
Sbjct: 492 QQHALERSLSEMTLIQKSVVNQPYFSYQMNELKLPVPE--ERFDHLMDILNVLKSGSGSS 551
Query: 541 SSSSSITDDNKQPRNVTDWNHIELNLESEGYNLPES 575
SSSSSITD+NKQPRNV DWNHIELNL+SEGYNLPES
Sbjct: 552 SSSSSITDENKQPRNVIDWNHIELNLKSEGYNLPES 567
BLAST of Lsi05G005200 vs. NCBI nr
Match:
XP_038905764.1 (zinc finger CCCH domain-containing protein 18-like isoform X2 [Benincasa hispida])
HSP 1 Score: 936.0 bits (2418), Expect = 1.5e-268
Identity = 489/576 (84.90%), Postives = 510/576 (88.54%), Query Frame = 0
Query: 1 MHMEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAK 60
MHMEFS+YTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEV+MLAK
Sbjct: 1 MHMEFSDYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVIMLAK 60
Query: 61 TELHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSL 120
ELHQLRSMP+PVSP PS SPS GGFI +IR RQFSTSPP WEQ QLTNKPTPDY+ L
Sbjct: 61 NELHQLRSMPAPVSP--PSLSPSHGGFISSAIRNRQFSTSPPGWEQPQLTNKPTPDYIPL 120
Query: 121 GYPDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAEND--LNSFSTRNTRHYSNVPEF 180
Y DSMYEL NP FFCLDDH+EPSNSGLSSFDC Y EN +NSF TRNTRHYSNVPEF
Sbjct: 121 SYSDSMYELHNP-HFFCLDDHMEPSNSGLSSFDCRYVENAAMVNSFITRNTRHYSNVPEF 180
Query: 181 QPRTCHYYNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIV 240
QPRTCHY+NKGFCKHG+SCRYLHS GSL YN++SNVNDDHVF+PGSLERLEFEIV
Sbjct: 181 QPRTCHYFNKGFCKHGSSCRYLHS----GSL---YNSNSNVNDDHVFRPGSLERLEFEIV 240
Query: 241 ELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQV 300
ELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQV
Sbjct: 241 ELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQV 300
Query: 301 IDRPHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLT 360
IDRPHGQHAVILAEDAPKFMD+RKDKNDPGPI ++ +Y A S + Y
Sbjct: 301 IDRPHGQHAVILAEDAPKFMDHRKDKNDPGPIVSSARQ-IYMTFPADSTFTEDDVSDYF- 360
Query: 361 LFVCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYR 420
SVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYR
Sbjct: 361 ------SVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYR 420
Query: 421 EKSKLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYDFSPTMLRLRMEEQQQQQQ 480
EKSKLLERKY ERIEQQ QDYFSS YNNLE EQLH I RGYDFSPTMLRLRMEEQQQ+QQ
Sbjct: 421 EKSKLLERKYQERIEQQNQDYFSSRYNNLEPEQLHLIARGYDFSPTMLRLRMEEQQQRQQ 480
Query: 481 QQHALERSLSEMTLIQKSVGNQPYFSYQMNELKLPVPEATERFDHLMDILNVLNSGSGSS 540
QQHALERSLSEMTLIQKSV NQPYFSYQMNELKLPVPE ERFDHLMDILNVL SGSGSS
Sbjct: 481 QQHALERSLSEMTLIQKSVVNQPYFSYQMNELKLPVPE--ERFDHLMDILNVLKSGSGSS 540
Query: 541 SSSSSITDDNKQPRNVTDWNHIELNLESEGYNLPES 575
SSSSSITD+NKQPRNV DWNHIELNL+SEGYNLPES
Sbjct: 541 SSSSSITDENKQPRNVIDWNHIELNLKSEGYNLPES 556
BLAST of Lsi05G005200 vs. NCBI nr
Match:
XP_011650493.1 (zinc finger CCCH domain-containing protein 18 [Cucumis sativus])
HSP 1 Score: 895.6 bits (2313), Expect = 2.3e-256
Identity = 466/576 (80.90%), Postives = 501/576 (86.98%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
MEFS +TR VFHRI++IDP+NV KIIGFLLLHD+GDQEMARLAL +SHI++VVMLAKTE
Sbjct: 8 MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 67
Query: 63 LHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGY 122
LHQLRSMP PVSPL +IR RQ STSPP WEQQQLTNK TPDY+SLGY
Sbjct: 68 LHQLRSMPVPVSPL--------------AIRNRQPSTSPPGWEQQQLTNKHTPDYISLGY 127
Query: 123 PD-SMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTRHYSNVPEFQPR 182
D SMY+LQN A FCL+DH+E SNSGLSSFDCSYA+N LNSFSTRNTRHYSNVP+FQPR
Sbjct: 128 HDSSMYDLQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPR 187
Query: 183 TCHYYNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVELL 242
TCHYYNKGFCKHGNSCRYLHSNLVPGSLS +YNT+SNVNDDHVF+PGSLERLEFEIVELL
Sbjct: 188 TCHYYNKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELL 247
Query: 243 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDR 302
KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK SIQVIDR
Sbjct: 248 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDR 307
Query: 303 PHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLFV 362
PHGQHAVILAEDAPKFMD+RKD+NDPGPI ++ +Y A S + Y
Sbjct: 308 PHGQHAVILAEDAPKFMDHRKDRNDPGPIVSSARQ-IYMTFPADSTFTEDDVSDYF---- 367
Query: 363 CDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKS 422
SVHYG+VEDVRIPCQQRRMFGFVTFHS+ETVKLILSDDSEHLICGARVLVKPYREKS
Sbjct: 368 ---SVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKS 427
Query: 423 KLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYDFSPTMLRLRMEEQQQQQQQQH 482
KLLERKY ERIEQQ QDYF+SHYN+LESEQLHSI RGYDF PTMLRLRMEEQQQQQ++
Sbjct: 428 KLLERKYQERIEQQHQDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRE-- 487
Query: 483 ALERSLSEMTLIQKSVGNQPYFSYQMNELKLPVPEATERFDHLMDILNVLNSGSGSSSSS 542
LERSLSEMTL+QKSV NQPYFSYQMNELK+PVPEATE F+HLMDILNVLNSGS SSSSS
Sbjct: 488 -LERSLSEMTLVQKSVVNQPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSS 547
Query: 543 SSITDDNKQ---PRNVTDWNHIELNLESEGYNLPES 575
TDDNKQ P+NVTDWNH+ELNLESEGYNLPES
Sbjct: 548 ---TDDNKQQPHPQNVTDWNHMELNLESEGYNLPES 555
BLAST of Lsi05G005200 vs. NCBI nr
Match:
KAE8650111.1 (hypothetical protein Csa_010721 [Cucumis sativus])
HSP 1 Score: 877.9 bits (2267), Expect = 4.9e-251
Identity = 458/572 (80.07%), Postives = 494/572 (86.36%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
MEFS +TR VFHRI++IDP+NV KIIGFLLLHD+GDQEMARLAL +SHI++VVMLAKTE
Sbjct: 8 MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 67
Query: 63 LHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGY 122
LHQLRSMP PVSPL +IR RQ STSPP WEQQQLTNK TPDY+SLGY
Sbjct: 68 LHQLRSMPVPVSPL--------------AIRNRQPSTSPPGWEQQQLTNKHTPDYISLGY 127
Query: 123 PD-SMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTRHYSNVPEFQPR 182
D SMY+LQN A FCL+DH+E SNSGLSSFDCSYA+N LNSFSTRNTRHYSNVP+FQPR
Sbjct: 128 HDSSMYDLQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPR 187
Query: 183 TCHYYNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVELL 242
TCHYYNKGFCKHGNSCRYLHSNLVPGSLS +YNT+SNVNDDHVF+PGSLERLEFEIVELL
Sbjct: 188 TCHYYNKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELL 247
Query: 243 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDR 302
KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK SIQVIDR
Sbjct: 248 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDR 307
Query: 303 PHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLFV 362
PHGQHAVILAEDAPKFMD+RKD+NDPGPI ++ +Y A S + Y
Sbjct: 308 PHGQHAVILAEDAPKFMDHRKDRNDPGPIVSSARQ-IYMTFPADSTFTEDDVSDYF---- 367
Query: 363 CDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKS 422
SVHYG+VEDVRIPCQQRRMFGFVTFHS+ETVKLILSDDSEHLICGARVLVKPYREKS
Sbjct: 368 ---SVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKS 427
Query: 423 KLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYDFSPTMLRLRMEEQQQQQQQQH 482
KLLERKY ERIEQQ QDYF+SHYN+LESEQLHSI RGYDF PTMLRLRMEEQQQQQ++
Sbjct: 428 KLLERKYQERIEQQHQDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRE-- 487
Query: 483 ALERSLSEMTLIQKSVGNQPYFSYQMNELKLPVPEATERFDHLMDILNVLNSGSGSSSSS 542
LERSLSEMTL+QKSV NQPYFSYQMNELK+PVPEATE F+HLMDILNVLNSGS SSSSS
Sbjct: 488 -LERSLSEMTLVQKSVVNQPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSS 547
Query: 543 SSITDDNKQ---PRNVTDWNHIELNLESEGYN 571
TDDNKQ P+NVTDWNH+ELNLE + N
Sbjct: 548 ---TDDNKQQPHPQNVTDWNHMELNLERKELN 551
BLAST of Lsi05G005200 vs. NCBI nr
Match:
TYJ96506.1 (zinc finger CCCH domain-containing protein 18-like [Cucumis melo var. makuwa])
HSP 1 Score: 862.8 bits (2228), Expect = 1.6e-246
Identity = 455/587 (77.51%), Postives = 491/587 (83.65%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
MEFS +T+ VFHRI +IDP+NV KIIGFLLLHD GDQEMARLAL +SHI++VVMLAKTE
Sbjct: 1 MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60
Query: 63 LHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGY 122
LHQ RSMP PVSPL +IR RQ STSPP WEQQQLTNK TPDY+ LGY
Sbjct: 61 LHQRRSMPVPVSPL--------------AIRNRQSSTSPPGWEQQQLTNKHTPDYIPLGY 120
Query: 123 PDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTRHYSNVPEFQPRT 182
DSMY++QN FCL+DH+E S LSSFDCSYAEN +NSFSTRNTRHYSNVP+FQPRT
Sbjct: 121 HDSMYDIQNSVNLFCLEDHLEQS---LSSFDCSYAENVMNSFSTRNTRHYSNVPDFQPRT 180
Query: 183 CHYYNKGFCKHGNSCRYLHS-NLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVELL 242
CHYYNKGFCKHGNSCRYLHS NL+PGSLS +YN++SNVNDDHVF+PGSLERLEFEIVELL
Sbjct: 181 CHYYNKGFCKHGNSCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEFEIVELL 240
Query: 243 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDR 302
KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDR
Sbjct: 241 KSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDR 300
Query: 303 PHGQHAVILAEDAPKFMDYRKDKNDPGPIANAK---------------------YACVYW 362
PHGQHAVILAEDAPKFMD+RKD+NDPG I ++ + +
Sbjct: 301 PHGQHAVILAEDAPKFMDHRKDRNDPGSIVSSARQIYMTFPADSTFTEDDVSDYFRQMLN 360
Query: 363 HCIALSWLIPVSICIYLTLFVCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILS 422
CI L L+ I L L +CDCSVHYG+VEDVRIPCQQRRMFGFVTFHSIETVKLILS
Sbjct: 361 ACICLGLLMFQFAHIDLILIMCDCSVHYGMVEDVRIPCQQRRMFGFVTFHSIETVKLILS 420
Query: 423 DDSEHLICGARVLVKPYREKSKLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYD 482
DDSEHLICGARVLVKPYREKSKLLERKY ERIE QQQDYF+ HYNNLESEQLHSI RGYD
Sbjct: 421 DDSEHLICGARVLVKPYREKSKLLERKYQERIE-QQQDYFAPHYNNLESEQLHSIARGYD 480
Query: 483 FSPTMLRLRMEEQQQQQQQQHALERSLSEMTLIQKSVGNQPYFSYQMNELKLPVPEATER 542
F PTMLRLRMEEQQQQQQ+ ALERSLSEMTL+QKSV NQPYFSYQMNELKLPVPE TE
Sbjct: 481 FPPTMLRLRMEEQQQQQQR--ALERSLSEMTLVQKSVVNQPYFSYQMNELKLPVPEDTES 540
Query: 543 FDHLMDILNVLNSGSGSSSSSSSITDDNK--QPRNVTDWNHIELNLE 566
FDHLMDILNVLNSG+ SSSSS TDDNK QP+N+TDWNHIELNLE
Sbjct: 541 FDHLMDILNVLNSGTNSSSSS---TDDNKQPQPQNMTDWNHIELNLE 564
BLAST of Lsi05G005200 vs. TAIR 10
Match:
AT2G05160.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )
HSP 1 Score: 345.1 bits (884), Expect = 1.1e-94
Identity = 238/588 (40.48%), Postives = 329/588 (55.95%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLL-HDHGDQEMARLALGPDSHIQEVVMLAKT 62
M F+E VV RI +++PEN KI G+LLL ++G+++M RLA PDS + V+ K
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 63 EL----HQLRSMPSPVSPLSPSPSPSQGGFI---PFSIRTRQFSTSPPN----WEQQQLT 122
EL H S PS P+P G F P S+ S SPP WE
Sbjct: 61 ELARNSHHYHSPPS-----DHIPTPKFGSFTGSSPLSV-----SVSPPMKTGFWENS--- 120
Query: 123 NKPTPDYLSLGYPDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTR 182
M LQN QF +D P S F + + R +R
Sbjct: 121 -------------TEMDTLQNNLQFLNFED---PLTS--PEFSNGFFSQERQCLPLRTSR 180
Query: 183 HYSNVPEFQPRTCHYYNKGFCKHGNSCRYLHSNLVP--GSLSQMYNTHSNVND-DHVFQP 242
++PEF + CHY+NKGFCKHGN+CRY H ++P S +QM+N ++N++D +HV P
Sbjct: 181 RSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVSP 240
Query: 243 GSLERLEFEIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTK 302
SLE+LE EI+ELLK RRG+PISIASLPM+YYEKYG+ LQAEGYLTESQRHGK+G+SLTK
Sbjct: 241 VSLEKLEGEIIELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTK 300
Query: 303 LLTRLKTSIQVIDRPHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSW 362
LL RLK +I+++DRPHGQH+VILAEDA KF++Y ++N+ G I A +Y A S
Sbjct: 301 LLARLKNTIRLVDRPHGQHSVILAEDASKFVEYTGERNEHGAIL-AGSRQIYLTFPAESS 360
Query: 363 LIPVSICIYLTLFVCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLI 422
+ IY T YG VEDVRIPCQQ+RM+GFVTF S ETVK IL+ + H I
Sbjct: 361 FTEHDVSIYFT--------SYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFI 420
Query: 423 CGARVLVKPYREKSKLLERKYHERIEQQQQDYFSSHYNNLESEQLHSIPRGYDFSPTMLR 482
C ARVLVKPYREKS+ +Y + + + S + + E ++++P S M +
Sbjct: 421 CNARVLVKPYREKSR--SSRYLDNYKPLHGMRYGSKFIERDIE-MNTLPPRVSESSRMRK 480
Query: 483 LRMEEQQQQQQQQHALERSLSEMTLIQKSVGNQPYFSYQMNELKLPV-PEATERFDHLMD 542
+ E +Q ++ +SL N Y + ++ KL E E+ + L
Sbjct: 481 PFLSEPEQ------SVSKSLPT---------NYSYLGFSSDDFKLTSNAEQEEQAERLSY 522
Query: 543 ILNVLNSGSGSSSSSSSITDDNKQPRNVTDWNHIELNLESEGYNLPES 575
+L+ LN+ + +++ D++++ H E +L+S+ NLPES
Sbjct: 541 LLDYLNTEDNVMNITTNYRDNDRR-------THCE-SLDSQVLNLPES 522
BLAST of Lsi05G005200 vs. TAIR 10
Match:
AT3G52980.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )
HSP 1 Score: 283.9 bits (725), Expect = 2.9e-76
Identity = 182/406 (44.83%), Postives = 240/406 (59.11%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLL-HDHGDQEMARLALGPDSHIQEVVMLAKT 62
M F+E VV +RI +++PEN KIIG+LLL D D++M RLA PDS ++ ++ K
Sbjct: 1 MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60
Query: 63 ELHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLG 122
EL + S + PS I+ R+F + + Q L + P LS+G
Sbjct: 61 EL-------AKNSHYNNIPSSDH-------IQIRKFGSLSGSSNQSLLVSASPPSVLSMG 120
Query: 123 YP------DSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLNSFSTRNTRHYSNV 182
D L++ Q+F LD E S + F S+ S S R +R ++
Sbjct: 121 TSFWENTNDMDSSLKDNVQYF-LD--FEDSVTS-PEFSTSFFSQKKQSLSLRTSRRSLSL 180
Query: 183 PEFQPRTCHYYNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVND-DHVFQPGSLERLE 242
PEF + CHY+NKGFCKHGN+C H+N++D +HV PGSLE+LE
Sbjct: 181 PEFPLKICHYFNKGFCKHGNNC------------------HNNLSDEEHVVSPGSLEKLE 240
Query: 243 FEIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKT 302
EI+ELLKSRRG+PISIA LPM+Y+EKYG+ LQAEGYLTESQRHGK+GFSLTKLL RLK
Sbjct: 241 REIIELLKSRRGAPISIAFLPMMYHEKYGRSLQAEGYLTESQRHGKAGFSLTKLLARLKN 300
Query: 303 SIQVIDRPHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSIC 362
+I++IDRPHGQH+VILAED KF++Y ++++ G I A VY A S +
Sbjct: 301 TIRLIDRPHGQHSVILAEDVSKFVEYTGERSEHGAIL-AGSRQVYLTFPAESSFTEHDVS 360
Query: 363 IYLTLFVCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILS 401
Y + G VEDVRIPCQQ+RM+GFVTF +ETVK IL+
Sbjct: 361 NYFS--------EVGPVEDVRIPCQQKRMYGFVTFVYMETVKRILA 361
BLAST of Lsi05G005200 vs. TAIR 10
Match:
AT3G51950.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )
HSP 1 Score: 137.1 bits (344), Expect = 4.4e-32
Identity = 130/426 (30.52%), Postives = 183/426 (42.96%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
M+ E TR+V RI +DPEN KI+G LLL DHG++EM RLA GP++ + V++ AK E
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 63 LHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGY 122
L + S SP Q I SP N L P Y + G
Sbjct: 61 LGLMN--------CSRSPWSHQDELI-----------SPKNNRGSSLNPASLPFYANGG- 120
Query: 123 PDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLN--SFSTRNTRHYSNVPEFQP 182
S +L N F +DD S L S L+ + + + VP
Sbjct: 121 -RSSRDLTN--DFELMDDMNSRSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVP---- 180
Query: 183 RTCHYYNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVEL 242
C Y+ +GFCK+G SCR++HS D GS R +EL
Sbjct: 181 --CSYFARGFCKNGASCRFVHS------------------DGGADLVGSPSR-----IEL 240
Query: 243 LKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVID 302
L+S P A ++T S SL T+ ++Q D
Sbjct: 241 LRSNSVPP-----------------RLAHHFMTRS--------SLPSFSTK-GVNLQQND 300
Query: 303 RPHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLF 362
A+++ ++ K +R ++ D +A +Y A S + Y + F
Sbjct: 301 VQRAAAALMIGDELQKLGRWRPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFSTF 340
Query: 363 VCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREK 422
G V+DVRIP QQ+RMFGFVTF ETVK IL+ + H +C +RVLVKPY+EK
Sbjct: 361 --------GPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEK 340
Query: 423 SKLLER 427
K+ ++
Sbjct: 421 GKVPDK 340
BLAST of Lsi05G005200 vs. TAIR 10
Match:
AT3G51950.2 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )
HSP 1 Score: 137.1 bits (344), Expect = 4.4e-32
Identity = 130/426 (30.52%), Postives = 183/426 (42.96%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
M+ E TR+V RI +DPEN KI+G LLL DHG++EM RLA GP++ + V++ AK E
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 63 LHQLRSMPSPVSPLSPSPSPSQGGFIPFSIRTRQFSTSPPNWEQQQLTNKPTPDYLSLGY 122
L + S SP Q I SP N L P Y + G
Sbjct: 61 LGLMN--------CSRSPWSHQDELI-----------SPKNNRGSSLNPASLPFYANGG- 120
Query: 123 PDSMYELQNPAQFFCLDDHIEPSNSGLSSFDCSYAENDLN--SFSTRNTRHYSNVPEFQP 182
S +L N F +DD S L S L+ + + + VP
Sbjct: 121 -RSSRDLTN--DFELMDDMNSRSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVP---- 180
Query: 183 RTCHYYNKGFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVEL 242
C Y+ +GFCK+G SCR++HS D GS R +EL
Sbjct: 181 --CSYFARGFCKNGASCRFVHS------------------DGGADLVGSPSR-----IEL 240
Query: 243 LKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVID 302
L+S P A ++T S SL T+ ++Q D
Sbjct: 241 LRSNSVPP-----------------RLAHHFMTRS--------SLPSFSTK-GVNLQQND 300
Query: 303 RPHGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLF 362
A+++ ++ K +R ++ D +A +Y A S + Y + F
Sbjct: 301 VQRAAAALMIGDELQKLGRWRPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFSTF 340
Query: 363 VCDCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREK 422
G V+DVRIP QQ+RMFGFVTF ETVK IL+ + H +C +RVLVKPY+EK
Sbjct: 361 --------GPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEK 340
Query: 423 SKLLER 427
K+ ++
Sbjct: 421 GKVPDK 340
BLAST of Lsi05G005200 vs. TAIR 10
Match:
AT5G12440.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )
HSP 1 Score: 119.8 bits (299), Expect = 7.3e-27
Identity = 123/493 (24.95%), Postives = 206/493 (41.78%), Query Frame = 0
Query: 3 MEFSEYTRVVFHRISKIDPENVKKIIGFLLLHDHGDQEMARLALGPDSHIQEVVMLAKTE 62
M+ + T ++ +I ++P+ KIIG+LLLHD GD+++ LA GP+S +Q + K+
Sbjct: 1 MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60
Query: 63 L--------HQLRSMPSPVSPLSPSPSPSQG-----GFIPFSIRTRQFSTSPPNWEQQQL 122
L + PSP++P+ P +G GF+ F + +S W
Sbjct: 61 LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHSNGFMDFRRNSPSSPSSTSPWSFNNC 120
Query: 123 TN-------KPTPDYLSLGYPDSMYELQNPAQFF-----------CLDDHIEPSNSGLSS 182
N +P + + P S ++ + LDD + N LS
Sbjct: 121 INGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDD--QQLNDCLSF 180
Query: 183 FD--CSYAEN------------DLNSFSTRNTRHYSNVPEFQP---------RTCHYYNK 242
D CS E+ D + + + R +S F + C Y+++
Sbjct: 181 LDDSCSKTEDLVDPSIPLDYSVDGDGETHLHRRSFSCDASFVSGDDGFGGGCKPCVYFSR 240
Query: 243 GFCKHGNSCRYLHSNLVPGSLSQMYNTHSNVNDDHVFQPGSLERLEFEIVELLK------ 302
G CK+G SC+++H Y + + N P +E + E+++
Sbjct: 241 GLCKNGESCKFIHGG---------YPDNMDGNGIVADSPRKMENFVRQHEEMMRLKLAYQ 300
Query: 303 SRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKTSIQVIDRP 362
+R + + P + YEK L + +QR G F + +
Sbjct: 301 QQRLASQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWS------------ 360
Query: 363 HGQHAVILAEDAPKFMDYRKDKNDPGPIANAKYACVYWHCIALSWLIPVSICIYLTLFVC 422
+P ++ + G +N+ +Y A S + Y +LF
Sbjct: 361 ----------SSPGRLERMELAMHLGDQSNSASRQIYLTFPADSTFKDEDVATYFSLF-- 420
Query: 423 DCSVHYGLVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKSK 436
G V+DVRIP QQ+RMFGFV+F ETVK++L+ + H IC +RVLVKPY+EK K
Sbjct: 421 ------GTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGK 448
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SJ41 | 1.5e-93 | 40.48 | Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q6ZK57 | 1.5e-61 | 31.13 | Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica OX... | [more] |
Q84ZT0 | 8.4e-36 | 33.97 | Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. ja... | [more] |
Q9SV09 | 6.2e-31 | 30.52 | Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q10LZ9 | 1.8e-30 | 28.73 | Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L4W6 | 1.1e-256 | 80.90 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061520 PE=4 SV=1 | [more] |
A0A5D3BC66 | 7.9e-247 | 77.51 | Zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo var. makuwa O... | [more] |
A0A5A7VHD9 | 1.1e-243 | 79.33 | Zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo var. makuwa O... | [more] |
A0A1S3BL77 | 2.0e-242 | 79.33 | zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo OX=3656 GN=LO... | [more] |
A0A6J1L8K9 | 6.3e-204 | 68.85 | zinc finger CCCH domain-containing protein 18-like OS=Cucurbita maxima OX=3661 G... | [more] |
Match Name | E-value | Identity | Description | |
XP_038905763.1 | 1.5e-268 | 84.90 | zinc finger CCCH domain-containing protein 18-like isoform X1 [Benincasa hispida... | [more] |
XP_038905764.1 | 1.5e-268 | 84.90 | zinc finger CCCH domain-containing protein 18-like isoform X2 [Benincasa hispida... | [more] |
XP_011650493.1 | 2.3e-256 | 80.90 | zinc finger CCCH domain-containing protein 18 [Cucumis sativus] | [more] |
KAE8650111.1 | 4.9e-251 | 80.07 | hypothetical protein Csa_010721 [Cucumis sativus] | [more] |
TYJ96506.1 | 1.6e-246 | 77.51 | zinc finger CCCH domain-containing protein 18-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT2G05160.1 | 1.1e-94 | 40.48 | CCCH-type zinc fingerfamily protein with RNA-binding domain | [more] |
AT3G52980.1 | 2.9e-76 | 44.83 | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... | [more] |
AT3G51950.1 | 4.4e-32 | 30.52 | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... | [more] |
AT3G51950.2 | 4.4e-32 | 30.52 | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... | [more] |
AT5G12440.1 | 7.3e-27 | 24.95 | CCCH-type zinc fingerfamily protein with RNA-binding domain | [more] |