Lsi05G005030 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTCAGCAGCTTCCGTTTTCAGCAATCGGCATTGATTGAGAGAGGATTTTGGTGTTTAATTTTAGATTTTGTAGAACAAACGCTTGTTGTTGGAACTTGAAATTCTAATTTTTGAAGCTTAAAACCAAAAACCCAAGTGAATTTCCCTCTCATTCTAACACTCTTTCTTCTTCATCTTCAAAATCAAACAATGTTGTTGCTCTCACTCTGATTCTTCCTCCACCCTTCATACCCCCAGATTTGGTTGAACTAACTCTGAATCTCACCACTAAATATTACTTGGAACGAGGATCATATTTGAATTTCAAACTAACCCACTTCTCCCTTTTCTTTTTCATTGCTTGATTTTGAGATTCCTTATCACTTTCTACCCAAGTTTCTGCTAAAGTAAGCTGAAGGAAGAAATGGGTATTGCCAATCGAGAAGCTATGAAGCAGTTTCAACTGCTAATGGAGGAAGGTGAGCCCATTTCCTTGCACTTTCATCTTGTTCTGTTCTCTTATGTATATTTGCTTCCTAACATTTTTCTTTCTCTAATTTCATTTGTAACGCCCAACAGTCGATGGATCAATGAAGACCACATTTGAGGTTTGTTCTTTGATTTTGATCTTTACTGCTGGATCTGTTTTTTGATTGGATGATGTGAATAAAACTAAATGTATTGCGACATTGGTGGGGCTTTTCGATCTCAAAGCTTTATGAATGCAAACTAATGTTTAAGAGGTTTATTGCTCAATCGCAGTTTCGATTGTTGAATCGTAAATTTCTCTTGCCCTTAGATCTGTTTCTACGATGTCACTATTTTGAATCTGTTTTTTTGGCTGCTGGAAACTGTGATTTCGTAACATTTTGTTATCAAGAATGATATTCATTCTTGGTAGGAAATGGGGCTGCCTTGCAGTTGAAGCTAGAATAAATTTATGTAGTCCAGAGAAATCGATGGATTTTTTTTTTCCCTTTTTTTGAATCAAGATCATGATTTGGTTGATATGGGATCAGGTCTTATAAGTAGGTTTGAAGATCAAATTGTTGTTAATTTAACTGCCTGGACGAATGAAGATTTGTTGATTTCTGGGTGAAGTAGTTTAAAAGGGTTTACAAGTTAATTTCTCCAGGCTTTGTAGGATGAATTGAACTGGTAGGCATTCAAGTTACATTCTGGAAATTCTTGCAGTTTGGTTTGAAGTTTGAATTCGTAAAATAATTGAAGGGTTAAGAGATTTCTGGGTGTAAATGTAATGCAAGTTACTTTCTGGAAAAGAAATTGAGCTTGTAGAAGATTACTAATAACAATGAGAAAGAAACTTGTTCAGTTATAATATTTGATTTCAAAATGTAACTGGGATGATTATAATCTTCCTCACATTGGAAATGATTTGCATTTCTTGCTGTTATTGAATAAAAATTGTATTTTAATTGCATAACTAACTGAGTTGACTATCTTATTATCTCCAGAATATGCATCAAGGTCATCCAGTTGAAACTTTGGAACGATTTCTGAAGGCCAGAGACTGGAATTTAGCTAAAGCCCATAAAATGGTTAGATAAGTCAGTTAGCCTAGGAGTTTCAAGTTTCCGTTAAATTCTCTTAGCATTATATGTCTGTTTCACTCACTTTTGGTTTGTTTTGCTTCCGAATCTTCAGTTAATAGACTGTCTACATTGGAGGATACAAAATGAGATTGACAACATATTGGCAGTGAGTTTTTTTCCCCCTCCTGTTATTATTAAATGAATGTGCGTCTTTTTCTTTATAATTATTCCTTTAATTCCCCTAGTTGATGTGTATTGTAATACATTTTTTGTTTTCCATCAGTAGAAGAAAATTAAAAAATATAAATGTAGAGACAACCATTACAAGATATGCCTCTATAACTTCAAATGGGAATGATAAACTGTCTTTTTTTCCCAGAGAAACTAAAAGAACCAAAAGGTCATGTTTCAGGCAATTATCATTACAAATAGAAACAAAAACAAGCCAGGAAGGTGAGGGAGAGGTCAAACTTCTTGTTTGTCTCTATTCAATGCCACAGAAGCAAAAAATGGAAAAGCTAGCAATTGTTGTTAGTAGTCTCAAGTCTATCTTTTTCATTCCTACATTTGCAATGCAAGAGTCTTAACTTCAGTTGATCTTTTGATAATTTTGATGCCCTAGGCTTTTATTACAACAGTTATATCTCTATGTAAATCATGAATTAATGACAAACATATAACTCAAGTTTTTTTTTTTTTTTTTTAATTAAGCATACTGACAATAGTAAGCCAGAGGTGGTGATAAGTCTCATCACTATTATATGTTGAAGTTTCAGGTTATTTTTGGCTTTACGTACGTTTACAACATTTAATTTATCTCCTATTTTTACAGAAACCCATCATTCCTCCTGAGTTATACAGAGGGGTGCGAGACTCTCAGCTGGTAGGATTGTCTGGATACTCAAAAGAGGTACATAAACGGAATCATTGTCTTTCAATATTTGATCTTTAATACATTTCCAGTTATCCAACTAGCAACATGAATGATATTTTCCTACCAAAAACTAAATCAACTTCTCTTCCCTCGGGAAGGCTGCTACCTTGTTCCTCCCTCATTTAATTAATTTACTCTTTTCCACTGTACGCTTTTTTTCCAGGGTCTTCCTGTTATAGCTGTTGGTGTTGGTCAAAGCACCTTTGACAAGGCATCTGTAAGGATTTATTTTCCTCTGTGTACCATCTCTATCTGGCCTTTTCAGAAAGCTTAGAGAATTGAAATCCTAGTTTTGAACTTTTAAGACATGATCAAATTATATGCACAAATCAACAAATGCATCAAATTGCAGCTATGCAACTTTTTGCAACTGTGTGCACTGTGCGCATTAACTAGATCTGTGCAAAATTTATTACATTTTGTAAGCTGCATATAATATTCACTATATTTGTTGTGATATCATAGATAAGGTTAATTGATGTCACATCACGTCTGCTAGAATGACACGACTACAAAAACCAATTAATTGCATCAAAATTTCAAAGGATATTAACATTGGCTCTTTCGTTTTAGGTTCATTATTATGTGCAGTCACACATCCAAATGAATGAATATAGGGATCGCGTTGTGTTGGTAAGTATGTAAGACCGTTTAATCATTTTGCTGACTTATAAATGTTATTTAATATAACATGCTCTGTTTGCTGTAGCCTGCTGCAACAAAGAAGCATGGGCGACATATAAGCACCTGCCTCAAGGTTTTGGATATGACTGGGTTAAAGCTTTCAGCATTAAATCAAATAAAGGTACTTAGTTCTTTATGCGTCACAACTACAACATTTCCTTACCTTCAGCCCTACTTTGTGAATCAAACGTTCACAAGTTTGACAAAGCCTAAATAACTGAAAATTCACTTTACAGAATGAATTTTCTATTTTTCCATTGATGTGAAGCTCACAACACAGTTGCTTGTTTACTCTTTCATCTTTTTTCTCCGTCAGCATATGCAGTTGGTGCTTCCTTGTACAAGAACATTTGGTATTAGTAATGCTAATTATGTTTTTTTTTCTCCGGTTAATGCAGCTTCTGACTGTCATATCTACCATTGACGACTTAAACTATCCCGAGAAGACCGATACTTATTACATTGTAAACGTTCCATATGTATTTTCTGCTTGCTGGAAGGTGTGTGCTTATATTAATTCATATGGAAGAAGTATTCTCAATATACTTTCTATATAAGAAAGAAAAAGAAAATCCTGGGGCCGGAAGCCATCTGAAGGGAATGTGAATATGATTTGTTGTCCTTGCTGACAGGTTGTAAAACCTCTTTTGCAAGAAAGGACAAGGAGGAAAATCCAAGTGCTACAGAACTGTGGGCGAGATGAACTACTAAAGGCAAGCTTGCTTCCTCTGTTACTCTTCCCTCAGTATGATTACAATTTGGACATGAAATTTGCTCTCTCTCTCTCTCTCTCGCTCACTCCCTTTTAGAGAAGAAAAGGGTCACCCCATATTAGTGGAAAGGACATAAAACCATCTCTCATTTAAAGTTAGTTCCATTAAGCTGACATTGTCATTTGGTACTATAGTACAGCATCACCATATCTTTTTATCCATAGAAAATCTGGAAAATCTCAATCTAAAATGGATCATCATTGTATTTCTTACTCCATGATATATGCTAATGCTACAATACTGTGATTCAACTGTGGATAGCTGCTTTCTTGGTGGTTTATACAGTGGATGTGGACCCCAGCCTGATATCCATATGGGTCCGTTCCATGTTGATTAGGTTCATCCTTGCCTCTTTTAATTTCGAAACTACATGAAGTTGAAGGGTTTAAGCTGGACAATACGGCTCAATTTTGTTTGGAACCGATACCTTGTCTTATAAAGATTAAAAGAACTGTCAATCAAATATTGATTCTCTTGGAAACTAAACCAACTGCCCAACCAAATCTGATGAAAACCAACTAAGAACGTTGATCAAAGTGCATTGCACTAAATCAACCGACAGTAATTATAACCAGCCTGTTCAATTGGTTGTCAGTATTTCAAACTTTGATTCTCTGCTTTAATTTTATAATTCTAGTGGTGATTGACAAGGGTACTATGGGAGTACCATACTCCCTTTGTTCGTACCAATTTTTTTTTCATAAATACTAGTAGACCCTACATTAATATCAATTGATCCCACCTTATTTTTAAAAACATGCTGACATAGCATACAATAAATGGAGGGAATGAAAAAATTTATAATACTAAAAATTTTCTCGTGATCGACTTAGAGCTCTCAACTGAATCTAGATGTTTCTGATCAGATTTGACCTGTCAGTTGTTACTTGCTCTCATGCTTTACAACTCTTAACAGCTTGATCTCCCCCCATGGTAGAATTTGAAAATTTAAACAACAATGTGCTATCATTTAGTGAACTAATTTCATCCTTAACATCAATGTTTTTATTTTAAAAGTTTGCAACTCTTTTGCAGGTAATGGATTATGCATCACTACCACACTTTTGTCGAAAAGAAAAGTCAGGGTCATCTCGGCATGCTGAGAATGGAAATACAGAAAACTGTTTCTCCTTCGATAGTGCATTCCATCAACAACTTTACAATTACGTTCAGCAACAAGGTGCTGTTAGGGAGCCGATTGTACCAATCAAACAGGGATCATTTCATGTGGATTTCCCTGAACCAGATCCAAGAGATGTCCAAATCGCCAAAACGATAGAAACAGAGTTCCATAAGTTGGAAAATCACAATGCACTCAGCTATTCTATGAATGGCCTTCAAGTCAATGGAGAATGATGAATGTAGAATTACCAATCATGTCTAGGAAACTACAAGCCTATTGTGCTATTATTACATATAGGATAAAGCTCCTGCTTCCTATTTCATATGTAATAGAAAAGTTTATTTACACTATCTGCTGCATTGGTACCACATCTCTAACCTATGCTTAAGGCTTGTCTTGTTCGAGATGCCGTAAAATGAAATGATTCAGTCCTCTTATTTTGATTTCTCG TTGTCAGCAGCTTCCGTTTTCAGCAATCGGCATTGATTGAGAGAGGATTTTGGTGTTTAATTTTAGATTTTGTAGAACAAACGCTTGTTGTTGGAACTTGAAATTCTAATTTTTGAAGCTTAAAACCAAAAACCCAAGTGAATTTCCCTCTCATTCTAACACTCTTTCTTCTTCATCTTCAAAATCAAACAATGTTGTTGCTCTCACTCTGATTCTTCCTCCACCCTTCATACCCCCAGATTTGGTTGAACTAACTCTGAATCTCACCACTAAATATTACTTGGAACGAGGATCATATTTGAATTTCAAACTAACCCACTTCTCCCTTTTCTTTTTCATTGCTTGATTTTGAGATTCCTTATCACTTTCTACCCAAGTTTCTGCTAAAGTAAGCTGAAGGAAGAAATGGGTATTGCCAATCGAGAAGCTATGAAGCAGTTTCAACTGCTAATGGAGGAAGTCGATGGATCAATGAAGACCACATTTGAGAATATGCATCAAGGTCATCCAGTTGAAACTTTGGAACGATTTCTGAAGGCCAGAGACTGGAATTTAGCTAAAGCCCATAAAATGAAACCCATCATTCCTCCTGAGTTATACAGAGGGGTGCGAGACTCTCAGCTGGTAGGATTGTCTGGATACTCAAAAGAGGGTCTTCCTGTTATAGCTGTTGGTGTTGGTCAAAGCACCTTTGACAAGGCATCTGTTCATTATTATGTGCAGTCACACATCCAAATGAATGAATATAGGGATCGCGTTGTGTTGCCTGCTGCAACAAAGAAGCATGGGCGACATATAAGCACCTGCCTCAAGGTTTTGGATATGACTGGGTTAAAGCTTTCAGCATTAAATCAAATAAAGCTTCTGACTGTCATATCTACCATTGACGACTTAAACTATCCCGAGAAGACCGATACTTATTACATTGTAAACGTTCCATATGTATTTTCTGCTTGCTGGAAGGTAATGGATTATGCATCACTACCACACTTTTGTCGAAAAGAAAAGTCAGGGTCATCTCGGCATGCTGAGAATGGAAATACAGAAAACTGTTTCTCCTTCGATAGTGCATTCCATCAACAACTTTACAATTACGTTCAGCAACAAGGTGCTGTTAGGGAGCCGATTGTACCAATCAAACAGGGATCATTTCATGTGGATTTCCCTGAACCAGATCCAAGAGATGTCCAAATCGCCAAAACGATAGAAACAGAGTTCCATAAGTTGGAAAATCACAATGCACTCAGCTATTCTATGAATGGCCTTCAAGTCAATGGAGAATGATGAATGTAGAATTACCAATCATGTCTAGGAAACTACAAGCCTATTGTGCTATTATTACATATAGGATAAAGCTCCTGCTTCCTATTTCATATGTAATAGAAAAGTTTATTTACACTATCTGCTGCATTGGTACCACATCTCTAACCTATGCTTAAGGCTTGTCTTGTTCGAGATGCCGTAAAATGAAATGATTCAGTCCTCTTATTTTGATTTCTCG ATGGGTATTGCCAATCGAGAAGCTATGAAGCAGTTTCAACTGCTAATGGAGGAAGTCGATGGATCAATGAAGACCACATTTGAGAATATGCATCAAGGTCATCCAGTTGAAACTTTGGAACGATTTCTGAAGGCCAGAGACTGGAATTTAGCTAAAGCCCATAAAATGAAACCCATCATTCCTCCTGAGTTATACAGAGGGGTGCGAGACTCTCAGCTGGTAGGATTGTCTGGATACTCAAAAGAGGGTCTTCCTGTTATAGCTGTTGGTGTTGGTCAAAGCACCTTTGACAAGGCATCTGTTCATTATTATGTGCAGTCACACATCCAAATGAATGAATATAGGGATCGCGTTGTGTTGCCTGCTGCAACAAAGAAGCATGGGCGACATATAAGCACCTGCCTCAAGGTTTTGGATATGACTGGGTTAAAGCTTTCAGCATTAAATCAAATAAAGCTTCTGACTGTCATATCTACCATTGACGACTTAAACTATCCCGAGAAGACCGATACTTATTACATTGTAAACGTTCCATATGTATTTTCTGCTTGCTGGAAGGTAATGGATTATGCATCACTACCACACTTTTGTCGAAAAGAAAAGTCAGGGTCATCTCGGCATGCTGAGAATGGAAATACAGAAAACTGTTTCTCCTTCGATAGTGCATTCCATCAACAACTTTACAATTACGTTCAGCAACAAGGTGCTGTTAGGGAGCCGATTGTACCAATCAAACAGGGATCATTTCATGTGGATTTCCCTGAACCAGATCCAAGAGATGTCCAAATCGCCAAAACGATAGAAACAGAGTTCCATAAGTTGGAAAATCACAATGCACTCAGCTATTCTATGAATGGCCTTCAAGTCAATGGAGAATGA MGIANREAMKQFQLLMEEVDGSMKTTFENMHQGHPVETLERFLKARDWNLAKAHKMKPIIPPELYRGVRDSQLVGLSGYSKEGLPVIAVGVGQSTFDKASVHYYVQSHIQMNEYRDRVVLPAATKKHGRHISTCLKVLDMTGLKLSALNQIKLLTVISTIDDLNYPEKTDTYYIVNVPYVFSACWKVMDYASLPHFCRKEKSGSSRHAENGNTENCFSFDSAFHQQLYNYVQQQGAVREPIVPIKQGSFHVDFPEPDPRDVQIAKTIETEFHKLENHNALSYSMNGLQVNGE Homology
BLAST of Lsi05G005030 vs. ExPASy Swiss-Prot
Match: P45816 (SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SEC14 PE=3 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 5.1e-05 Identity = 49/177 (27.68%), Postives = 80/177 (45.20%), Query Frame = 0
BLAST of Lsi05G005030 vs. ExPASy Swiss-Prot
Match: P46250 (SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=SEC14 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.9e-04 Identity = 38/135 (28.15%), Postives = 64/135 (47.41%), Query Frame = 0
BLAST of Lsi05G005030 vs. ExPASy TrEMBL
Match: A0A5A7VBR3 (Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00270 PE=4 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 7.5e-153 Identity = 279/337 (82.79%), Postives = 287/337 (85.16%), Query Frame = 0
BLAST of Lsi05G005030 vs. ExPASy TrEMBL
Match: A0A1S3BM24 (phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Cucumis melo OX=3656 GN=LOC103491033 PE=4 SV=1) HSP 1 Score: 547.4 bits (1409), Expect = 3.7e-152 Identity = 278/337 (82.49%), Postives = 286/337 (84.87%), Query Frame = 0
BLAST of Lsi05G005030 vs. ExPASy TrEMBL
Match: A0A0A0L2T6 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G047890 PE=4 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 1.4e-151 Identity = 279/337 (82.79%), Postives = 284/337 (84.27%), Query Frame = 0
BLAST of Lsi05G005030 vs. ExPASy TrEMBL
Match: A0A6J1FDB2 (phosphatidylinositol/phosphatidylcholine transfer protein SFH1-like OS=Cucurbita moschata OX=3662 GN=LOC111443069 PE=4 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 1.5e-148 Identity = 270/337 (80.12%), Postives = 284/337 (84.27%), Query Frame = 0
BLAST of Lsi05G005030 vs. ExPASy TrEMBL
Match: A0A6J1KZ89 (phosphatidylinositol/phosphatidylcholine transfer protein SFH1-like OS=Cucurbita maxima OX=3661 GN=LOC111498439 PE=4 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 7.3e-148 Identity = 271/338 (80.18%), Postives = 285/338 (84.32%), Query Frame = 0
BLAST of Lsi05G005030 vs. NCBI nr
Match: XP_038903621.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH2 [Benincasa hispida]) HSP 1 Score: 558.9 bits (1439), Expect = 2.6e-155 Identity = 286/337 (84.87%), Postives = 288/337 (85.46%), Query Frame = 0
BLAST of Lsi05G005030 vs. NCBI nr
Match: KAA0065742.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH2 [Cucumis melo var. makuwa] >TYK13766.1 phosphatidylinositol/phosphatidylcholine transfer protein SFH2 [Cucumis melo var. makuwa]) HSP 1 Score: 549.7 bits (1415), Expect = 1.6e-152 Identity = 279/337 (82.79%), Postives = 287/337 (85.16%), Query Frame = 0
BLAST of Lsi05G005030 vs. NCBI nr
Match: XP_008449044.1 (PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH2 [Cucumis melo]) HSP 1 Score: 547.4 bits (1409), Expect = 7.7e-152 Identity = 278/337 (82.49%), Postives = 286/337 (84.87%), Query Frame = 0
BLAST of Lsi05G005030 vs. NCBI nr
Match: XP_004148256.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH2 [Cucumis sativus] >KGN56028.1 hypothetical protein Csa_010315 [Cucumis sativus]) HSP 1 Score: 545.4 bits (1404), Expect = 2.9e-151 Identity = 279/337 (82.79%), Postives = 284/337 (84.27%), Query Frame = 0
BLAST of Lsi05G005030 vs. NCBI nr
Match: XP_022936458.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH1-like [Cucurbita moschata]) HSP 1 Score: 535.4 bits (1378), Expect = 3.0e-148 Identity = 270/337 (80.12%), Postives = 284/337 (84.27%), Query Frame = 0
BLAST of Lsi05G005030 vs. TAIR 10
Match: AT1G55840.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 383.3 bits (983), Expect = 1.8e-106 Identity = 192/321 (59.81%), Postives = 229/321 (71.34%), Query Frame = 0
BLAST of Lsi05G005030 vs. TAIR 10
Match: AT5G47730.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 372.1 bits (954), Expect = 4.1e-103 Identity = 190/330 (57.58%), Postives = 230/330 (69.70%), Query Frame = 0
BLAST of Lsi05G005030 vs. TAIR 10
Match: AT1G55840.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 356.3 bits (913), Expect = 2.3e-98 Identity = 179/293 (61.09%), Postives = 209/293 (71.33%), Query Frame = 0
BLAST of Lsi05G005030 vs. TAIR 10
Match: AT5G47730.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 318.9 bits (816), Expect = 4.2e-87 Identity = 159/256 (62.11%), Postives = 188/256 (73.44%), Query Frame = 0
BLAST of Lsi05G005030 vs. TAIR 10
Match: AT5G47730.3 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 318.9 bits (816), Expect = 4.2e-87 Identity = 159/256 (62.11%), Postives = 188/256 (73.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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