Lsi05G004500 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCCGATCCATCGCCAGGTTCCTTCTAATTAACTCTCAATTAATTAATTCCTGATTCTTTTTTTTTTGTCCTTTGATCGTGACCGTTGATTTTCCTTTTCTTTTTTTTTTTTTAGAGAGATTGAGATTATCGGTAATGGTCTTCTCAGTGGCCGTTTCAGGTCGTTTTCTTCGGTTTCCAGTCGGAGAAGGTGAGGATTCCATTATTTCTTTTCTTCTTCGATTTTGATCTTTTCGTTTTGGCTGTCTTGATTTCTCTTAAGAGAAAAAAATAAAAATTAATGGAGGTTTTTCCATGGGAAATTTTTAAAAAAATAAAATAAAAAAAAACTATTTATAGAAAAAAAGTTTGAATTTATTAGTAGTAAAAATTATAGAAGTCTATTAATAATAGATGCTAATAGAAGTATATCAATATCTATCCTTTTTTTTTTACTATTTTCTGTAAATACTTTGACATTTTTTTCCATGCGTGAAAATTTATCTTTATTTTATATATAATTATAAATATAATGATTTTTTTTTCTTTTCTTCATTTCGCGAAACTAAAAACTAGTGTCTCCTTAAGTAAGCAATAAGTTTTTAAAAATTAAATTTGTATATAGGTATTACGATTTGTTTGTTTTGTTAGACGTGTATTAAAAGAAATGAAGCTAGATTTTAAAAATAAAATAAAAGAAATTACTATAAACAGAAAAAAATCAAACTATTTAGAAATATAGAAAAATTTCACTGTAATAAATCGTAATAGATTTCTATCGCTTTCTATCGCTCAAGCAAATAAATTCTATCGCTTGAATGATAGAAAGCGATAGAATTCTAAATGGTCTATCACTGATAGACTGGAAAATTTTTCTATATTTATAAATAATTTGGCTCATTTTTCTATATTTGAAAAGAGTCCATAAAATAATTAGTTTTATTTTTTTATTTAAAATTGACTAAAAATTTGAATGTTTATATAAGAAAGATGAAAAATCATGTAAGAAAATGGTGAGAAAACAAATACAATTTTTAAAAATCAAATAGTTATAATGATTTCTTATATTTTGAGTTTCTCAAATTTTAAAAGTTAAATTATATAAAATAATCCTAAATTTTGGGATTTACTTTCTGGATTTGAAACATTTAATTTTTACTCTTAAATTTTAAAATTTGTTCCAAATATATTCTTTTAAGTTTTGAAATTGTTCCAAAAATATATTTTTTTTGTTAAAATAAATTATCAATTACGGATGTGGCAACTCATGTGTAGAAAATGGAAGACCCAAATGTGTGAGTCGATTGTCCATATATATGTGGGACAAAGTCTTTAGAGTTATTCTAAATTTTGTCCTATTTTTAAATTCCAAGACTATTTACTTATATTAAAAATTAATAGGTTAAAATATTATTTTAATTCTTATATTTTGAATTTTTGTTAATTTTAATTTTTTTATACTTTTAAATTTTAAAATTTAGTCCATATATTTTTAATAAATATTAAATTTAGTCCCTCAAAATTAATGTTCATTGATATTGGTTAAATAATAATAATAATAATAATTTTCTTGAAAAAATATATTAGGTGAATATTTTTTAAAATTTATCTTGAAAAGGTTAATAAATAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAATCAAGCAATAGGATTAAAGTATAAGACTAAAATTGTAATTTAACCAAATTAATAGGAGTGGGAATAAAAACCATTTATAAAGTGATGAGCATGGCCCATGGGAGGATGATCTTTTATTTATGCAAAAAGAAAGTCACTTAGAATAATATAACTTTTTTCCTTTATAAAAAATATATTATCCAATTGTTTTTTTTGAAAGAATTATTATTCTTTAAAAAATGTATATATTAAGTAATATCCAAATAATAATTGAGCTACAAGTTTTAATGACTTGACTAAGATTATTTTTTCTTCTTCTCAAAAGTAGATAAATGAGAAAAATGTTTCATAAACATTATGGCTTACTTGGAGAACATTTTGAATTAATTTTTCTTCTTTTGTCTATAGAAGTAATTATTTTTAAAAATTATAGTCACATGTTGCATATTAAAGTTTGTTGTGCAATTTAAACAACTATATATTTTCAAGTACATAATTTTTATACGAAAATCATCAACCAGTCATTTATTAAAAATAAACATATAGGGAAGTTGGCTATATTATTTGTCATGCATATGAAAATGAAATAAAACTAAAGGGTAATTATAATGATTAGCAATTTTAAGGATAATAATCAAGTGCATAGCAACATTTCAAAAAAATTGTAAATATAGCAAAATCTATTAGTGATAGACCACCTAGACCATAAAAGTCTATTAGCGGTAAAAGTCTATCACTGACAGACTTTGTTATATTTACAATTTTTAAAAAATGTTGCTATATATGCTAATACTTTGAATTTGATTGCTATATTTGCAACTGTATAAAAAAAAAGACATATTATGTTTGTTGTTAATGTGCTAAATCTCGAAACATTTCATCAATAAATTAGTATTTTTATTATATCGTATAAAAATTTATGAAATATGAAAAATAAGTAATATTTGTTACTAATATAAAATAATAAATATGTTAACTTGTCTAAAATGTGAAATATTTATTTATTAATTTAAATAATTTTTTGGATTTTTTAAATTTTATAATGCTTTTAGAAATATTCATTGACACGACATTTACTTGATGTTTTCATTGACATTTTAGTAAAATCATGACATTTCAAGTCTTGGTTGTTACAAATTATTTGAATTGTAAGTCAAATTTCAACTAAAGAAGTAAAAAGAAAAAAGTGTTTGCATAAACGTAGTTCAACTGACATAAAATATGAACTCTCGATCTCAAGGTTGGTTTAGATTATTATTATTATTATTATTTAACTTGACTAAAAGTACATAACGTATCATAATTTTTAAAATACATCAAAAGATAAAAAGAAAAAGCTAATTTCTAAAAACTGAAAATTGAAAATAAAATAGTTGTTAAAGTAGCCTAAATCAAACAATATAAATAGAAATCAGCGTAAATGTTCGTGTGGATTGACTTTTGAAGTGTTTATATACATTTTTTTTATTTATAAATACTTATTTAAACACTTAAAAAATCAATTCAAACAGAACCTGAATTTAAACTCAATTCTTTATCCAAGTTTTGAGGTTCTAACATTCTAAATAACTTGTATATTATCACGTGCAACAATTTTGATCGTGGATTTGAGTCTTTGTAATTGTACATTATTTGTATTTGAAGATTCACTTTAGATTTCAATTTTTTTCTTTTGTACACAATGAAAAAAATCAAACATTTGACGTGAAAGTTGATAATACATTCTTAATTGTTATTATTATTATTATATTATTTAAATCATAATGAATTATTACTAAAAAGAAATGTGGTAATGAATATAGGAATAGGACTCATTTTCATGGTGTCATTTTCGGGCTTATAGCTAAATATTTATTACATTAAGCGGAAAAAGAATTGTGACATAAAAGACAGCTGCAGAAAGCGAGAGGTGTGAGGCCACTCATGGGATCCTTTTTGCTCAATTTATTAGATTAATGGTATATATATATATATATAACATTTTCATTCCTATCTTTCCAAGATTTGTTAAATTTTAGTTTTCTTACTCTTAATTATCTAATTTTAATTTGTATATTTTTAATAAATCTTAAATTTAATATCTTCAAGTTAATTTTTATCGAAATTAGTTATAATAAAGAGAAATTTTTAAAAATGAAAAAATACGAGAAACTATTTACACAAAATAACAAAATTTTTAAATAGTTGTGATAGATACAAATAGAAGTCTATCAGGGTCTATCAATTATAGAAATGATAGAAATTTATCATTAATAAATGCTGATAGAAGTCTATCAATGTCTATTAGTATTTTTTTTCCTATTTTCTGTAAATAGTTTGACATTTTTTCTATCAGTGAAAATTTTCCAAAAAAAATCGTTATTATTGGGCCTTAATTATTTTCATTCATTTTCGTTGTTGGAATCAGGCTGGAAGGCAAGGTGGCTTTGATAACCGGGGCAGCAAATGGGTTGGGCCAAGCCACAGCCCAAGAGTTCGTGGATCATGGGGGCCATGTGATAATTGCCGACATAGACACCACGTTGGGCCCACAGGTAGCCGAGCAACTGGGCCCCACCGCCAAATTCGTACAATGTGACGTGGCACTGGAGTCAAAAGTAGCCGCCGCCGTGAACTTTGTGGTGGCTCACCATGGAAAGTTGGACATTGTATACAACAACGCAGGAATCACCGGATCGATGCTGCCACAGAGCATAGCGGAGCTAGACCTAGCCGAGTTTGACCGAGTGATGAGCGTCAACGTGCGTGGAGTCATAGCCGGAATAAAGCACGCGGCTCGAGTTATGGTCCCGGCTGGGTCCGGGTCCATTTTGTGCACCTCAAGCATAAGTGGGCTCATGGGTGGGTTAGGCTCACTTCCTTATTCCATATCGAAACACGCAATTTCGGGGATAGTGAGGTCGGCGACGACGGAGCTCTGCCGGAGCGGAGTACGAGTGAACTGCATATCGCCGGCGCCGATAGCAACAACGCTGGCAGTGAAGGGGATAAGGGAAATGTACAAAGGGGATAGTAAGGAAGAGATCGTTGGAATAATAAATGGGCTTGGGGTTCTTAAGGGCGCAATTTGCGAGGAGAGTGACGTGGTGAAAGCGGCACTCTTTTTAGTTTCTGACGATGCCAAATACATCACCGGTCATAATCTCGTCGTCGACGGCGATCTTACTTCCTTCAAAAACCTCGATTTCCCTTCCTTCCACTAG ATGTTCCGATCCATCGCCAGAGAGATTGAGATTATCGGTAATGGTCTTCTCAGTGGCCGTTTCAGGTCGTTTTCTTCGGTTTCCAGTCGGAGAAGGCTGGAAGGCAAGGTGGCTTTGATAACCGGGGCAGCAAATGGGTTGGGCCAAGCCACAGCCCAAGAGTTCGTGGATCATGGGGGCCATGTGATAATTGCCGACATAGACACCACGTTGGGCCCACAGGTAGCCGAGCAACTGGGCCCCACCGCCAAATTCGTACAATGTGACGTGGCACTGGAGTCAAAAGTAGCCGCCGCCGTGAACTTTGTGGTGGCTCACCATGGAAAGTTGGACATTGTATACAACAACGCAGGAATCACCGGATCGATGCTGCCACAGAGCATAGCGGAGCTAGACCTAGCCGAGTTTGACCGAGTGATGAGCGTCAACGTGCGTGGAGTCATAGCCGGAATAAAGCACGCGGCTCGAGTTATGGTCCCGGCTGGGTCCGGGTCCATTTTGTGCACCTCAAGCATAAGTGGGCTCATGGGTGGGTTAGGCTCACTTCCTTATTCCATATCGAAACACGCAATTTCGGGGATAGTGAGGTCGGCGACGACGGAGCTCTGCCGGAGCGGAGTACGAGTGAACTGCATATCGCCGGCGCCGATAGCAACAACGCTGGCAGTGAAGGGGATAAGGGAAATGTACAAAGGGGATAGTAAGGAAGAGATCGTTGGAATAATAAATGGGCTTGGGGTTCTTAAGGGCGCAATTTGCGAGGAGAGTGACGTGGTGAAAGCGGCACTCTTTTTAGTTTCTGACGATGCCAAATACATCACCGGTCATAATCTCGTCGTCGACGGCGATCTTACTTCCTTCAAAAACCTCGATTTCCCTTCCTTCCACTAG ATGTTCCGATCCATCGCCAGAGAGATTGAGATTATCGGTAATGGTCTTCTCAGTGGCCGTTTCAGGTCGTTTTCTTCGGTTTCCAGTCGGAGAAGGCTGGAAGGCAAGGTGGCTTTGATAACCGGGGCAGCAAATGGGTTGGGCCAAGCCACAGCCCAAGAGTTCGTGGATCATGGGGGCCATGTGATAATTGCCGACATAGACACCACGTTGGGCCCACAGGTAGCCGAGCAACTGGGCCCCACCGCCAAATTCGTACAATGTGACGTGGCACTGGAGTCAAAAGTAGCCGCCGCCGTGAACTTTGTGGTGGCTCACCATGGAAAGTTGGACATTGTATACAACAACGCAGGAATCACCGGATCGATGCTGCCACAGAGCATAGCGGAGCTAGACCTAGCCGAGTTTGACCGAGTGATGAGCGTCAACGTGCGTGGAGTCATAGCCGGAATAAAGCACGCGGCTCGAGTTATGGTCCCGGCTGGGTCCGGGTCCATTTTGTGCACCTCAAGCATAAGTGGGCTCATGGGTGGGTTAGGCTCACTTCCTTATTCCATATCGAAACACGCAATTTCGGGGATAGTGAGGTCGGCGACGACGGAGCTCTGCCGGAGCGGAGTACGAGTGAACTGCATATCGCCGGCGCCGATAGCAACAACGCTGGCAGTGAAGGGGATAAGGGAAATGTACAAAGGGGATAGTAAGGAAGAGATCGTTGGAATAATAAATGGGCTTGGGGTTCTTAAGGGCGCAATTTGCGAGGAGAGTGACGTGGTGAAAGCGGCACTCTTTTTAGTTTCTGACGATGCCAAATACATCACCGGTCATAATCTCGTCGTCGACGGCGATCTTACTTCCTTCAAAAACCTCGATTTCCCTTCCTTCCACTAG MFRSIAREIEIIGNGLLSGRFRSFSSVSSRRRLEGKVALITGAANGLGQATAQEFVDHGGHVIIADIDTTLGPQVAEQLGPTAKFVQCDVALESKVAAAVNFVVAHHGKLDIVYNNAGITGSMLPQSIAELDLAEFDRVMSVNVRGVIAGIKHAARVMVPAGSGSILCTSSISGLMGGLGSLPYSISKHAISGIVRSATTELCRSGVRVNCISPAPIATTLAVKGIREMYKGDSKEEIVGIINGLGVLKGAICEESDVVKAALFLVSDDAKYITGHNLVVDGDLTSFKNLDFPSFH Homology
BLAST of Lsi05G004500 vs. ExPASy Swiss-Prot
Match: Q9SCU0 (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana OX=3702 GN=SDR2a PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.5e-60 Identity = 125/270 (46.30%), Postives = 176/270 (65.19%), Query Frame = 0
BLAST of Lsi05G004500 vs. ExPASy Swiss-Prot
Match: P50160 (Sex determination protein tasselseed-2 OS=Zea mays OX=4577 GN=TS2 PE=2 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 4.0e-58 Identity = 120/283 (42.40%), Postives = 172/283 (60.78%), Query Frame = 0
BLAST of Lsi05G004500 vs. ExPASy Swiss-Prot
Match: Q94KL7 (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 PE=1 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.2e-54 Identity = 123/255 (48.24%), Postives = 167/255 (65.49%), Query Frame = 0
BLAST of Lsi05G004500 vs. ExPASy Swiss-Prot
Match: Q7FAE1 (Momilactone A synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0179200 PE=2 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 3.0e-53 Identity = 121/257 (47.08%), Postives = 163/257 (63.42%), Query Frame = 0
BLAST of Lsi05G004500 vs. ExPASy Swiss-Prot
Match: F4J2Z7 (Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE=2 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.8e-51 Identity = 116/261 (44.44%), Postives = 165/261 (63.22%), Query Frame = 0
BLAST of Lsi05G004500 vs. ExPASy TrEMBL
Match: A0A0A0L8S5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G598890 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.3e-136 Identity = 258/297 (86.87%), Postives = 270/297 (90.91%), Query Frame = 0
BLAST of Lsi05G004500 vs. ExPASy TrEMBL
Match: A0A6J1J856 (short-chain dehydrogenase reductase 2a-like OS=Cucurbita maxima OX=3661 GN=LOC111482148 PE=4 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 6.1e-134 Identity = 249/296 (84.12%), Postives = 266/296 (89.86%), Query Frame = 0
BLAST of Lsi05G004500 vs. ExPASy TrEMBL
Match: A0A1S3BPB3 (momilactone A synthase-like OS=Cucumis melo OX=3656 GN=LOC103491733 PE=4 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.5e-132 Identity = 251/287 (87.46%), Postives = 262/287 (91.29%), Query Frame = 0
BLAST of Lsi05G004500 vs. ExPASy TrEMBL
Match: A0A6J1F9M8 (short-chain dehydrogenase reductase 2a-like OS=Cucurbita moschata OX=3662 GN=LOC111442080 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 3.3e-132 Identity = 246/296 (83.11%), Postives = 263/296 (88.85%), Query Frame = 0
BLAST of Lsi05G004500 vs. ExPASy TrEMBL
Match: A0A5D3E4K6 (Momilactone A synthase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00170 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 2.1e-126 Identity = 237/271 (87.45%), Postives = 247/271 (91.14%), Query Frame = 0
BLAST of Lsi05G004500 vs. NCBI nr
Match: XP_011651586.1 (short-chain dehydrogenase reductase 3c [Cucumis sativus] >KGN58243.1 hypothetical protein Csa_017609 [Cucumis sativus]) HSP 1 Score: 495.7 bits (1275), Expect = 2.7e-136 Identity = 258/297 (86.87%), Postives = 270/297 (90.91%), Query Frame = 0
BLAST of Lsi05G004500 vs. NCBI nr
Match: XP_023527081.1 (short-chain dehydrogenase reductase 2a-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 488.0 bits (1255), Expect = 5.6e-134 Identity = 250/296 (84.46%), Postives = 265/296 (89.53%), Query Frame = 0
BLAST of Lsi05G004500 vs. NCBI nr
Match: XP_022983588.1 (short-chain dehydrogenase reductase 2a-like [Cucurbita maxima]) HSP 1 Score: 486.9 bits (1252), Expect = 1.3e-133 Identity = 249/296 (84.12%), Postives = 266/296 (89.86%), Query Frame = 0
BLAST of Lsi05G004500 vs. NCBI nr
Match: KAG6581134.1 (Short-chain dehydrogenase reductase 2a, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 485.0 bits (1247), Expect = 4.8e-133 Identity = 248/296 (83.78%), Postives = 265/296 (89.53%), Query Frame = 0
BLAST of Lsi05G004500 vs. NCBI nr
Match: XP_008450017.1 (PREDICTED: momilactone A synthase-like [Cucumis melo]) HSP 1 Score: 482.3 bits (1240), Expect = 3.1e-132 Identity = 251/287 (87.46%), Postives = 262/287 (91.29%), Query Frame = 0
BLAST of Lsi05G004500 vs. TAIR 10
Match: AT3G26760.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 320.1 bits (819), Expect = 1.9e-87 Identity = 169/299 (56.52%), Postives = 216/299 (72.24%), Query Frame = 0
BLAST of Lsi05G004500 vs. TAIR 10
Match: AT3G26770.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 305.1 bits (780), Expect = 6.3e-83 Identity = 147/263 (55.89%), Postives = 199/263 (75.67%), Query Frame = 0
BLAST of Lsi05G004500 vs. TAIR 10
Match: AT4G03140.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 299.3 bits (765), Expect = 3.5e-81 Identity = 150/281 (53.38%), Postives = 199/281 (70.82%), Query Frame = 0
BLAST of Lsi05G004500 vs. TAIR 10
Match: AT3G51680.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 234.6 bits (597), Expect = 1.0e-61 Identity = 125/270 (46.30%), Postives = 176/270 (65.19%), Query Frame = 0
BLAST of Lsi05G004500 vs. TAIR 10
Match: AT3G29250.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 204.5 bits (519), Expect = 1.2e-52 Identity = 116/259 (44.79%), Postives = 164/259 (63.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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