Lsi05G003350 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G003350
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr05: 4243893 .. 4253827 (-)
RNA-Seq ExpressionLsi05G003350
SyntenyLsi05G003350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAAGTAAAAACAAATCTTACATACCTGACTATGGTTTTCAAACAATACAATATATAAAGCTTCAGCACATGGTCGTAGTTTCTCTGTCCACAAAACCATATCCTGCTCATGATGGAAAGACTCGGGGTTTTGGTACCACTCCTCCAAGTCACTTGCTGTTAAAACAAAATACCTGTCAAAGTGAAAGCATGAGACTTAATCACTTTACAAGTCGATAAAAATATAATACCATAGTAATAATAACAGTACAAATAAAAAAATAAAAAACAGTTCCTCTCAACTCAATGCCAGCATTATGCAAAGTTAGAGTAAGGCAGAACCAAGAGAAATAACAAAACAATGTAAAACTCCAATGATTGTTCTTTCTTTTTTTTTTTTTCTGAATAATACATCAAATGTGGGGATTGAAATTCTGGATTAACCTTTGAACTACTGGGCTCGTGGGTGTTTTGAAGCTACCAGTTGTCACTCTGGTGGATGCAACAGTATCTCTTTTAAACCCTTAAATATGTTGGATCGTAGCTCAGCAAATATGGAGGTTAAAAGGAATTTTTGTGGATTTATTCCAGCGATAGTTGAAATTAAGGATAGAAAGGTTGGGAGTTTTTTTTTTTTTTTTTTTTCCTTTTTTTTTTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTTTTTTTTTTTTTTTTCCTTTTCTTTTTGAAACAAGGAAACGACATAAAACACAGATATGATCAACAAGATTAAAGATAAAAGGTTAAAAGGAATCTGGTTCTTTTAAGAAATCTCCATCCCCACTTGGCTTGGCCATAAGGGCCAGATTTCTATTCTTGTTTTACACCAAGGCCAAGACCACCTTGAAAATTTGCTTTGGAAACTAAAGTACATCTTACCAGATGGTTAACATTGCTTTAAACCTTTCCTTCCCAAACGAAATTTGTAGTATATGATCAAGCTCCAAACTAACTGAGGCCAGCATAAGGAAAATGAACATATAGTATAGAGGAATGCTGGACAAAACTGAATTACATAAAGTCATCCTTCCTTCCCTGGAAAGTGTAAATCTTTTCCATCTATCAACTTTTTTATGAATTTTATCCAACACCAGCTGCCAACAAGAATGCCTTTTTGGATATCCGCCAAGCAACTTCCAAGATAAAGAAAAGGCAACGACTCCATTTTGCAATTTTTTTTTGAAGACTTTTCATTAAAATAATGAAATGAGTCTAATACCCAAAGTACAAAAGAGGAAACAAAACATATGCCAGTACAAAAAGAGTAACACAAGATTAATCCAAGATTTAACTAATAGAAGAGGATATAAATGGATTCCAATTTAAAAAAATGTCTTGAATTAAGGGAACTGCAAAAAGTTTGGAAAGAGAGCACCATAAAGAAGCTTTGATTCAAGCAATCTCTAACGATCAAATCAAACCAAGGAAGTGGCTTGTCATGAAAAATGCGTTGATTCCTCTCAAACCATATTTCAGAAAGAATAGCTTTCACGGCATTAACCCACAAAATTTGAGACTGAGCTTTTAAGGAAGGACCCACTAGAGCTAAATCACGTTGGACTTGAAGTCCTCACTCAAAACCCATTGAAGATTAAACAATGAGAAAAGCTTCCTCCAAAATTCTATAGAATAACAACCAAAGAAAAGATGCTAAGAGTCCTCATTATCCGCCAAACAGAGAGGACATACTGAGGGCAAAAGCAAGTGACTTGGGGGCTTCCTTTGAAGAGTCTTTGAACAATTAAGCCTCCCAAAAATCATATCATAACCCAAATGGTGATGTTAACTCTCCTTGAACAACTTGATTTCCACAAAGCTTCATAAAACTTGTTATCCATGGGAGGAGATGCAACCAAATGCTTAAACAAAGAGTTAAAAGATTCCAAATTCCATCTTCTTGAATCTTGTCTATCAACCACCCTTTGACCTTCTAAAGATGCGAATAACCGCTGAAATTCCAGCACTTCATCTTCCTTCAAAAATCTTCTAAAAGTGATTGACCATGATAGAGTACCCAAATCCCAATGACCAAGGACTGAACCTTTGGGATTAGATGCAATCCTAAGTAAACTTGGAAAAAGAGAACTTAAAGAGGATGCATTCAGCCAATTATCATGCCAAAATGAAATCCTATTAGCCAAGTTTAAAAGAAGCGAGATAGTCTACTTGTCAAGCTCGAGAGATGTTGATCCAAGGACTTCGAAGACTTCTTATTTGCCCGAAGTATGCCAATTATGATAACCCCTTCCATGAATACTCTTCGCCACTTTGCACCATAGAGCTTCCTCCTCAAAAATAAAACTCTAACCCCATTTTGCCAACAAAGCCAAGTTCCTGTTTTTTAGTTCTCCAAAATCGAGGCCCCCATTTTGTTGATGCTTTGAGACCAAATCCCACTTAACCAAGTGGTTGATCTTGTTGCAGTTGACCCCTTCCCAGGAGAAATTCCTCATAATCTTCTCTATTTTCGAAATTACCTTCATTGGCATAGCAAAAGAAGACATATAGTAGATTGGGAGGTTTGAAAGAACTGCCCTATTCAATGTGAGCCTTTCTCCACGAGATAAGTTAAAACACTTCTATCTATCTAATTTCTTCAAAATCTTGTCAATAATTGGTTGCCAAAACAATACTTTTCTGTGGATACCCTCCAAGAGGGAGCCCAAGATACATAAATAGTAGTGTTTCAGTCTTACATTTCATACGAGAAGTTGTGCCCAGCAATTTGCCTTCTTCAATATTCACTCCACACAATGTAGAATGTTCCCACTTGACTTTTTGCCCTGAGCACCACTCAAATAGCTCAATGACTTTTATCGGAGCATTCAACATTTCATCATCATCTTTACAAAACAGAAGCACATCATCAGCGTATTGAAAGATGGAAACAAGTACTTTACTCTTTCCCACTATAAAGCCTTCAAAGACCCCTTTCTCGTGAATAAGGACAACAAGTGTGCTCAACAATTCACTTACATGAGGAAAAGAAAGGGGGAAAAAGGATCCCCTTGCCTAATTCCCATAGAAGCATTTATTCTTCCACGTGGTCTTCCATTAACAAAAACTGAAAACTTCAGATTTCTTACACATCCATTAATCCATTGGATCCAGTTGGCATCAAATCCTTTTAAGATGAGTACATTTTCTAAGAAACCCCAATCAACTCGATCAAAGGCCTTTTCTAAGTCAAGCTTAAGGATCCAATCCAACCTTTCTTCTTTTTAGATCTATAGACTATATTCCTCCACTACTTCATTTGCTATAAGGACTGGATCCAGAATTTGGTTGCCACCAGTAAAAGCACTTTGAAAAGGAGAAATGATACTAGACATCACCTTTTTCAATTTCTCTGCTAAGACTTTTGCAACAATTTTGTACACTGAAGTTGTGAGACTAATGAGCCGAAAATCCTTCACAAAGCCAACAGATTCTTTTTCAACAATTTTGTACACTGAAGTTGCTACATAACTTTTCTCCAGCTTTCAAATCTTTAGCTTTTAGGTCTTTGATTTAAACATGCCCAAAGTCTTTTATATCCGCAGCTCTTGAAGAAACTAGAGATGCCTTTTGGCAACTTGGAGTCCAATAATACATCATTCCCATACCCAATGTCTCTTATATTCTCAGCTCACAAATTTAAGCATGAACGGCAATGTAAGTTTCATCAGCACATGCACTAATAGTAATAATACCCTTCTTGTAGTAATCGTTAAACCTTCTTTGAATCTTGCTTGTTCCAATTTGAGTTGGAACAAAAGAACTCCACCGAGAAAACCATCTTCGCCTAAGAGGTTCAGATCTCCCTAGTGACAAAAGTTTAAATTTCTCAGACCACTCAACTGCCAAAGAGCCAACGAGAAACCAAGACGGAGCTCTAGGATAAATCTTTTGGAAAAAGAAAATTGAGGATCTCCTCCCCAATCCTAAAGAATAAAACAAATACAACTGTTAGCTCTTCTTTGGTACATGTACTTTGATATAGTCTCTAAACTTTAATATGTACTCATTTTTTTTTAAAGTAATATGTAATGATTTAATCCCTGTATGTAATAATTTCGTCTTGAGCTCTAATACTCAACAACTTAATCTCCAGACTTTCAAATTGTAAAGGTTTAGTCAAGTTCAAGGACAAAGTGAGCATAGCTCAGCGGTAATTGACACGAACTTCTTTCCTTGAGGTTAGACGTTTGATCTCCCACCCCGCAATTGTTGAACTCAAAAAATAATAATAATATTATTATTATTATTATTAAAGTTAAAAGGACTTAGTTGTAAGTTTGTAACAAATTTCAAAGTACGAAAACTAAATCGTTACATTACTAAAGTTTTTTTTTTAAAAGGAAACAAGAATTTTCATTGATAAAATGAAAAGAGACTAACGCTCAAAATACAATGAAACAAAATAAAACAAAATTAAGTAATTACAACCAATAATAGCACTTAAAAAGAAATAGAAGCCCTTTGAAATCAACTAAGCAGAGAGTCCATAAATTAGACGACCAGCAAAGAGAGGGAGAGAAACTGCCGAAAAATCAAAGCTCTAATTTCTTTTTTGGATAAGAAACGATTTCATTGATTGAATGAAATATCCAAAGATATTGAAAGGACATAAGGCCCCGATCAAAGATATAAAAAAATGCTTCCAATTTGCAATAAGAAAGGAGAAGCTGTGACTATGTATAGCCGGTATATCATTACATAAAAAATAAAAAATAAAAAGCAGAATGAATACAATTGCCAATGATGTCCTTTGTCGATCTATATTTTTTTTGGAAGATTCTTGAATTTCTTTTGTCCCAAATCTTCCCCAAAACAGCACTGATGATGCTTCACCATATACGCCCCTTTGAAGCTTTGAATGGGTGGTAACAAATCAACAATCTGTGCCAACTCTGTGTATCAAATGGGAGGACAACCGAACAACTGAAGGCATCGAAAACATCATTCCAAATCCCTTTAGAGAAAGGATATTAAAAAAAACATGCTGCACAGATTCATTGTTGCATTTGCAGAGACAGCACCAGGATGGAGAGAGGTTGATCCAAGGACATCGTTTTTGAAGCCTATCCATCGTATTAAGACAAGAGTTGGTCACTCCCAAAGGAAGAATTTCACTCTCTTCGGACACGGGCATCTCCAGATCTTCTTGAATAAACTATCAGTGTGAGATAGCATGTTGGCAAAGCTCCAACTTCAACGATTTGGATGCAAAGCCATTCTTGTAGCCAAACAACAACTTAGAGAAATCTCCAAATTATTCAAATCAAAGCTCCTAAATTACTAAAGTTTAAGTACTAAAATGTTACTTTATATGAACCAAAAGTATTTTTTTAACCTAATCCAAATTTTATAAGTATAATAGAAGAACTTTTACCATCCCTTCAGATCACCAAAGAATTCTTTGCTTTAAAATGACAATCCTTCTTTAAATTAGTTTTTTCATAAACAAATTATATTTCACAAGGATATATGAAAGAAGCCATCACATTTCAATTTAGTAAGAAACCGAGGAAAGGAATACATGGGCAAACAAAGAAGCCTGACAAATAGAAAACAGGGAGCCCAACAGAAACAAAGGGCAAGAGGGAATCCAAAAGTAACTACAAAAATCAGACCAAGATCATAGTTACAAAAGAAAGTAGTTTATTAACTGAAGCCCATAATGGGGCATTAAACCTAGCCCCTTCCTAAACATCCTCACTAGAACTATCCACTCCTTCCTAAAGCTTCTGTAATTCCTCTCAACCCAAATACTCCAAATGATGGTGCAAAAGCTGGCTTGCTAGAGAACTTTCCCGTTCCTACCAAAAAGCAAACTCAAGAGCAGTTCCTCAATCATGGAAAACTAATCTCTTCTCCAACTCCAAGCCAACTGTAAGACTCTTAAAAGAATCAGAGAATTGCGAGAAGCATTTTTAGGCTTCCAATAAATCATTAGGGGGCGCTCGGGGCAAGGAGTGAAATTGTGAAGTCTGGGGAGTCTTGGGCCTAATAAGGCAAAAAATTGAAGTTTTTTAGTCGTGAGGCTCACGAACTCTTTGGGTCAAACAAGGAGTAGAGTTCACAATTCCACTCCCTCCAACTCCTACTCCCCCAATTCCTTGGGCCAAACACTCCCTTAGCGTCTTCACAACCATTGACCATCAAAAGGTTAAAAATTGTTATATTGTTGCCTACCCTTTGTCTTACACTTGAAGAAGAGAGTCTCAATTTTTGTCTCCTCCATTGACCGAGGTTTGTATTCAGAATCCACACTAAATTGAAGAAAATTGTTTGCATCTCTTGGTCTCCTCTGAAATGCAAATGGAAACTCAAAATTTCACATCAACATCACTGCATTAACCTCAGAACGAAGCCAGAATGAACCCTCTTCAGTTGGTCCATTTTTTATTAAAGGCTACGAAGCATAGATACGGATATGAGATACAAATACGACACTAAATGGACACATCGACACCATTTTTTTAAAATCTAGGACACGAACACAGCATGGACACATTTATTAAAATGTACATTTTTTAAAATATACATCATTTTTATACTAGAAGAAAATTCAAAGTCAATGAGTTTATGCATTAATATGCTTAAAAGATTAGTTTGATATATTTCACTCACAAAATTTATTATCATTGTCATACATGTGTCTATTTAGTATACTTAACAAATGTTTGATGCATGTCTAACAAATGTTGCACGACCTACTTTGACTTTGTACAACTTGTGTCTGATACATGTCCAACAAGTGTTGGCGTGTCCAAGTATTCAACACATGTCAAACACGAGCACATTAGCCAAAGTAAAGTGCTTGTGCTTCTTAGATCAAAGGTGTCATCCCTCTGACAAAAGACCCTACTTCTCCTCTTTCCCCCTCTCGTCATGATGACTTTGATGTCGAATCTAATGCTAGCCTAAGTAGTGTGAAATCATAGTGTAGCCTATGGATAATATTTTTGATGTTGCATGTGAAGAATCCTCCTCTAAAGCATTCGAGCTTTTATTTTAGGAAATGGGAAGTGATCTGGAGACTCCTCTTACTCCTTCCGCAAGACCTTCCAAATTTGCATCTCTTATTTCAACTTGTAGTCTTGAGACTCATGAAATTTCTCAGCAAATTTCAAATAGTTCAGTATAATAGACTCTTAGGCTGTGATGTTTCTTCCCTTTTAACAAGAGCTTTGGGTGTATCTTCATTTTTTTTAATAAGAACAACTTTCACTGAGAAAAAATGAAAGAATACACGGGCGTACAAAAACCATGCCCACAAAAAAGGGGACTCCCTCTACAAGAAGGGACTCCAGCCATACAAAATCATGTCCATAGAATAATTACAAAAAACCTTCGAAATCGAAGCCCAGTGAGAAACATGAAAACAAACAAGAGACCATATATCTCTAGTTTCCCTCTCAACCCCCCTAAAAACCCTACTATTCCTCTCACTCCACAACACCCAAACAATAGCACAAACACTAGCAAGCCAGAGAAAACGGTCTCTCTCCCCAAACGGTGGATTGAGGAGGAACTCCTTGATCATGTCTCTAACATCTCTGTGACAAGCATACATCATGCCGAACATCTGGAAAAAAGAGTCTCAGACAAAGCTCACAAAATCACAATGCCAAAGAATATGGTCCAAGTCTTCTTTCGCCTTCCGATAAAGAACACAACAAAAAGGTCCAACCAACGACGACATCTTCCTAACGAGCCTATCCAACGTACTAATACGGTCATGGAGAACCTGCCAAGTGAAGAATCTCACTTTTCTAGGAAACTTGATCCTCCACAGCGACGAAAAGACAGACTCACCCAAAGGAGAAGGATTAACCAAACACTGGAAGAAAGACTTACACGAGAACCCTTCCAAAGGCTTAGGGCTCCAGCTTTCACATCTCTCCTTCCAAGGCAAAAGGGGTGACTCTCAATAAGAGAAAGGAGAGCAACCACGTCCATCATTTCCCTATTGGAAAGAGTACGACGGAACCCGAAGGAAAACGAGCAAGAGCTCCCTATCCACACAAGAAAATCTGTCACAAAATGATTTTTATAAGAAGACAAAGATACAACCTGGAAATAACCCGTAGAGAGGTCTATTCCCCACCCAGTGATCTTCCCAAAAATACGCATCTCTCCCTTCCCCCACCACACACCGGACCCAAAGTAGGGAGCTCTTTCCGGGTGTATCTTCATAAGACATGGGTCCTTTGATGGTTCCTAGCATTTAGTTGTTGAAGTTCTTGGCTTTGGTCTGCTGGCCCTTCTAGGTTTTTTATCATTCTTGTCTTGCTAATGAAAGGGGGAAAAAAATTGTCTCCGTGAAAGTTTTGTCGGTTTGCAAGATGGCTTGAAGGTTGGGAGATTGTTGGAATCTATATATTTGGTCTTCAGTGATGTTTGTTGCAAGTTGCAACAAAATACCTTGTGGTTAATTTTGGACGTTATATTGTTGGTTGGTGATCAATTCTTGATTTTCTTTGGAAGGTTTGAAAGTCGCTATCAATTTTCAGCCTTTGGTAGCAACCTTACTCATCGCTTCAGCATTCATTCACAAGCTCCCTATGTCTTCCAGGCGTTGATATTAGCACAGTTCTTTGTTCTTCAAATTTTTGTATATTTTCATGGCTAATCCTTTTATGGTTGTATTTGCAGTTTTCATTTTTGTTTTCTTTTCTTCCTTTTTCCTCCCTTTAGGAGTTTGTATCCCTAGAATGAATATTTATTTATTTTTATTACATCAATGAGAAGTTGTTTCTTGTTAAAAAGAAATACACAAAGTCAAATGACATTTTAAATTACAGCTGACCTAACAATCAGTAAAACCACAACATTACAACCTTAAACCACAGATATTTGATATTGATTTTGTATATTTACCTCCTTATTAATACACCACATAGGTGTACTACACGGTCTCCAGGCAGAAGAGAATTTAACACACCACCTACAGCACTTGATATGTTTTTCTTCATCTGCTCTACTGTCAACCCATTTTCATCCACCACTCGACCTGTAACGCTAGGTTTGTATTCCTTACATTCAAGAGTATTCTTTACCATTACCATACATTGTATCAAGAATTGCTCAAAGGACAACACATAAGGTTCAGGATCTGTTATTTTGTTTAAGCAGAAATTGATGACAGGTGGAAGAACGGACTTGTCACCAAATGAATACGGATGCCTCGCTTGTAATGCAATCAAAACCTTCATCAATTTAATGCAAGCTCTCTTTATGAAGTCCCAAAATTTGGAATTTCTTTCTTGA

mRNA sequence

ATGGCAAAACTCTTGAAGAAACTAGAGATGCCTTTTGGCAACTTGGAGTCCAATAATACATCATTCCCATACCCAATGTCTCTTATATTCTCAGCTCACAAATTTAAGCATGAACGGCAATTAATCGTTAAACCTTCTTTGAATCTTGCTTGTTCCAATTTGAGTTGGAACAAAAGAACTCCACCGAGAAAACCATCTTCGCCTAAGAGGTGTACTACACGGTCTCCAGGCAGAAGAGAATTTAACACACCACCTACAGCACTTGATATGTTTTTCTTCATCTGCTCTACTGTCAACCCATTTTCATCCACCACTCGACCTAAATTGATGACAGGTGGAAGAACGGACTTGTCACCAAATGAATACGGATGCCTCGCTTGTAATGCAATCAAAACCTTCATCAATTTAATGCAAGCTCTCTTTATGAAGTCCCAAAATTTGGAATTTCTTTCTTGA

Coding sequence (CDS)

ATGGCAAAACTCTTGAAGAAACTAGAGATGCCTTTTGGCAACTTGGAGTCCAATAATACATCATTCCCATACCCAATGTCTCTTATATTCTCAGCTCACAAATTTAAGCATGAACGGCAATTAATCGTTAAACCTTCTTTGAATCTTGCTTGTTCCAATTTGAGTTGGAACAAAAGAACTCCACCGAGAAAACCATCTTCGCCTAAGAGGTGTACTACACGGTCTCCAGGCAGAAGAGAATTTAACACACCACCTACAGCACTTGATATGTTTTTCTTCATCTGCTCTACTGTCAACCCATTTTCATCCACCACTCGACCTAAATTGATGACAGGTGGAAGAACGGACTTGTCACCAAATGAATACGGATGCCTCGCTTGTAATGCAATCAAAACCTTCATCAATTTAATGCAAGCTCTCTTTATGAAGTCCCAAAATTTGGAATTTCTTTCTTGA

Protein sequence

MAKLLKKLEMPFGNLESNNTSFPYPMSLIFSAHKFKHERQLIVKPSLNLACSNLSWNKRTPPRKPSSPKRCTTRSPGRREFNTPPTALDMFFFICSTVNPFSSTTRPKLMTGGRTDLSPNEYGCLACNAIKTFINLMQALFMKSQNLEFLS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G003350.1Lsi05G003350.1mRNA