Lsi04G023860 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGGTTTGAGAGGTACGGTAAGAAGAGGGTGATGGTGGTGGTGGATCATACATCGCAGTCCAAGCATGCTATGTTGTGGGCTCTTACTAATGTGGCCAATAAGGGTGATTTGTTCACTCTTCTTCATATTGTTTCTCACTCAAACAGGCTCTCTGAAATGCCTTCTGATTCTTCTTCCTCATTTCTTGCTAACTCTCTTGGCTACCTCTGCAAAGCTTCTAGACCTGAGGTATAA ATGGAAGGGTTTGAGAGGTACGGTAAGAAGAGGGTGATGGTGGTGGTGGATCATACATCGCAGTCCAAGCATGCTATGTTGTGGGCTCTTACTAATGTGGCCAATAAGGGTGATTTGTTCACTCTTCTTCATATTGTTTCTCACTCAAACAGGCTCTCTGAAATGCCTTCTGATTCTTCTTCCTCATTTCTTGCTAACTCTCTTGGCTACCTCTGCAAAGCTTCTAGACCTGAGGTATAA ATGGAAGGGTTTGAGAGGTACGGTAAGAAGAGGGTGATGGTGGTGGTGGATCATACATCGCAGTCCAAGCATGCTATGTTGTGGGCTCTTACTAATGTGGCCAATAAGGGTGATTTGTTCACTCTTCTTCATATTGTTTCTCACTCAAACAGGCTCTCTGAAATGCCTTCTGATTCTTCTTCCTCATTTCTTGCTAACTCTCTTGGCTACCTCTGCAAAGCTTCTAGACCTGAGGTATAA MEGFERYGKKRVMVVVDHTSQSKHAMLWALTNVANKGDLFTLLHIVSHSNRLSEMPSDSSSSFLANSLGYLCKASRPEV Homology
BLAST of Lsi04G023860 vs. ExPASy TrEMBL
Match: A0A0A0KYK7 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G364040 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 3.4e-31 Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Lsi04G023860 vs. ExPASy TrEMBL
Match: A0A5A7TPE6 (UspA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00780 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 7.5e-31 Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0
BLAST of Lsi04G023860 vs. ExPASy TrEMBL
Match: A0A1S3B978 (uncharacterized protein LOC103487581 OS=Cucumis melo OX=3656 GN=LOC103487581 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 7.5e-31 Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0
BLAST of Lsi04G023860 vs. ExPASy TrEMBL
Match: A0A6J1FLX8 (uncharacterized protein LOC111446414 OS=Cucurbita moschata OX=3662 GN=LOC111446414 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.2e-30 Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Lsi04G023860 vs. ExPASy TrEMBL
Match: A0A6J1IYE7 (uncharacterized protein LOC111480323 OS=Cucurbita maxima OX=3661 GN=LOC111480323 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 8.3e-30 Identity = 71/79 (89.87%), Postives = 74/79 (93.67%), Query Frame = 0
BLAST of Lsi04G023860 vs. NCBI nr
Match: XP_038898922.1 (uncharacterized protein LOC120086377 [Benincasa hispida]) HSP 1 Score: 154.1 bits (388), Expect = 5.1e-34 Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of Lsi04G023860 vs. NCBI nr
Match: XP_004142622.1 (uncharacterized protein LOC101217745 [Cucumis sativus] >KGN54573.1 hypothetical protein Csa_012648 [Cucumis sativus]) HSP 1 Score: 143.7 bits (361), Expect = 6.9e-31 Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Lsi04G023860 vs. NCBI nr
Match: XP_023523706.1 (uncharacterized protein LOC111787863 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 142.5 bits (358), Expect = 1.5e-30 Identity = 72/79 (91.14%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Lsi04G023860 vs. NCBI nr
Match: XP_008444147.1 (PREDICTED: uncharacterized protein LOC103487581 [Cucumis melo] >KAA0045242.1 UspA [Cucumis melo var. makuwa] >TYK19270.1 UspA [Cucumis melo var. makuwa]) HSP 1 Score: 142.5 bits (358), Expect = 1.5e-30 Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0
BLAST of Lsi04G023860 vs. NCBI nr
Match: XP_022940999.1 (uncharacterized protein LOC111446414 [Cucurbita moschata]) HSP 1 Score: 141.0 bits (354), Expect = 4.5e-30 Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Lsi04G023860 vs. TAIR 10
Match: AT1G44760.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 84.0 bits (206), Expect = 6.1e-17 Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of Lsi04G023860 vs. TAIR 10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 9.1e-05 Identity = 27/84 (32.14%), Postives = 45/84 (53.57%), Query Frame = 0
BLAST of Lsi04G023860 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 9.1e-05 Identity = 26/71 (36.62%), Postives = 39/71 (54.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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