Lsi04G023280 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G023280
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	GATA transcription factor
Location	chr04: 30490393 .. 30492140 (+)
RNA-Seq Expression	Lsi04G023280
Synteny	Lsi04G023280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCCTCCATTTTAGCTGTCTTCCTGTCCCCTTTAGACGCAAATTAAAAATTAAAGGGAAAAAGAAAAGAAAAAAAAAAGTTCTCTCTTTCTCTTTCTCTCTCTCTTTCTGTTTCTGTTTCTCTCTCATCTTACATAGCCATAACTCCTCACACTTCACTCTCGGCCACTCTCTCATTTTTCTGTTCCTCACTTTTTTTTCTCCTTCTCAATCGCTACTTTCCTCACTATTTCCCACTCACAAACCCTTAATTTTTGCCCACACACAATACTCTAATGGAAGGACCCGAATATTTCCAGCCCGGTTTTTGCTCTCAATTCGCCACCGAAAACCGCCAGTCCACCGATGCAAATAAAACCACCGTCGTCCAACCCTCCGCTGTTGCCGCCACTGCTGACCATTTCGTCGAGGACCTCTTAGATTTCTCTAATGACGACGACGTTGTCTTCACCGATGGAAATTTCGACAACCAAACCCCTACCTCCACCGATTCCTCCACTCTTACTTTACTCGATTCATGCAATTCCTACCCCAATTTCGAACAACACAACAATGCCCACAACTATAATTTCGCCGACGCCAATTTCTCCACCGACCTTGGTGTGCCGGTAATAACAAACAACATTCATCATTCATTTTCCCATCTCTTTTTCAATTTTCTCAAAACAATGTCTGAATTCTTTTTTCTCAATTTTTGTATTGTGTTGTGTTGGTCATTTCCTCAGTACGATGACTTGGCGGAGCTGGAATGGCTTTCCAATTTCGTGGAAGACTCTTTCTCCACCGACGACTTGGAGAAGCTGAGTCTGATATCCGGGATGAATTCCCGGACTGACCATGACGATGACGCCTCAAAAACCCCAGAATTCCAGACCGGATTGAACCGGAACCACTCGTCATCCGGTTTCCGTCCCGAAATGTCGGTACCAGCTAAAGCCGCTCGTAGCAAGCGGTCTCGGGCGGCGCCCTGCATATGGAACTCCCGATTATCCGTACTCTCTCCCACAAATTCCTCTTCCGAAACCGACGTTGTCGTCACGCTCACGCCACATCCAAACACCGCCAAGAAAACCGCCAAGAAGAAAGAAATCCCGGACGACACGTCGTCCGCCGGCAATGGGGAAGGCCGTAAATGCCTCCATTGCGCCACCGACAAAACGCCGCAGTGGCGAACGGGCCCAATGGGCCCAAAGACTTTATGTAACGCTTGTGGGGTCCGGTACAAGTCCGGTCGTCTCGTACCGGAATACCGACCGGCGGCGAGCCCCACGTTTGTACTGACGAAACACTCGAATTCTCACCGGAAAGTTATGGAACTCCGACGGCAGAAGGAGATGATGAGAGCACAGCATCAACAACAGTATGTTCATCATGAGAGCATGGGGTTTGATCATGTATCCAACGACGACGATTATTTGATCCATCAACACATAGGGCCGCTCTACCAATAGCTTCCTCCATCAAAAATCCAATTCCCTCCGTTGATTTCCTTCAAGTTTTCTGACAATTAGAGAAAAAAGAGAAAAAAATGTTTTTGAATTTAGTGGCTAATTATATTTCAAAATCTGATTTAGAGTTACTTTACTTGAGTGAATTTTTAGATTCATTAATTTCAATTTCTAACAACTTAAATTTTGAAGTTAGCATAATACTGATAATTACTTTTCTTAAAGTTGTCTCTTCCTTCCTTCTTTCTTTCTTTCTTTTTTTTGAAATAGGCCTAAAGTTGGGGTTGCTCCGAAATCCA

mRNA sequence

AAATCCTCCATTTTAGCTGTCTTCCTGTCCCCTTTAGACGCAAATTAAAAATTAAAGGGAAAAAGAAAAGAAAAAAAAAAGTTCTCTCTTTCTCTTTCTCTCTCTCTTTCTGTTTCTGTTTCTCTCTCATCTTACATAGCCATAACTCCTCACACTTCACTCTCGGCCACTCTCTCATTTTTCTGTTCCTCACTTTTTTTTCTCCTTCTCAATCGCTACTTTCCTCACTATTTCCCACTCACAAACCCTTAATTTTTGCCCACACACAATACTCTAATGGAAGGACCCGAATATTTCCAGCCCGGTTTTTGCTCTCAATTCGCCACCGAAAACCGCCAGTCCACCGATGCAAATAAAACCACCGTCGTCCAACCCTCCGCTGTTGCCGCCACTGCTGACCATTTCGTCGAGGACCTCTTAGATTTCTCTAATGACGACGACGTTGTCTTCACCGATGGAAATTTCGACAACCAAACCCCTACCTCCACCGATTCCTCCACTCTTACTTTACTCGATTCATGCAATTCCTACCCCAATTTCGAACAACACAACAATGCCCACAACTATAATTTCGCCGACGCCAATTTCTCCACCGACCTTGGTGTGCCGTACGATGACTTGGCGGAGCTGGAATGGCTTTCCAATTTCGTGGAAGACTCTTTCTCCACCGACGACTTGGAGAAGCTGAGTCTGATATCCGGGATGAATTCCCGGACTGACCATGACGATGACGCCTCAAAAACCCCAGAATTCCAGACCGGATTGAACCGGAACCACTCGTCATCCGGTTTCCGTCCCGAAATGTCGGTACCAGCTAAAGCCGCTCGTAGCAAGCGGTCTCGGGCGGCGCCCTGCATATGGAACTCCCGATTATCCGTACTCTCTCCCACAAATTCCTCTTCCGAAACCGACGTTGTCGTCACGCTCACGCCACATCCAAACACCGCCAAGAAAACCGCCAAGAAGAAAGAAATCCCGGACGACACGTCGTCCGCCGGCAATGGGGAAGGCCGTAAATGCCTCCATTGCGCCACCGACAAAACGCCGCAGTGGCGAACGGGCCCAATGGGCCCAAAGACTTTATGTAACGCTTGTGGGGTCCGGTACAAGTCCGGTCGTCTCGTACCGGAATACCGACCGGCGGCGAGCCCCACGTTTGTACTGACGAAACACTCGAATTCTCACCGGAAAGTTATGGAACTCCGACGGCAGAAGGAGATGATGAGAGCACAGCATCAACAACAGTATGTTCATCATGAGAGCATGGGGTTTGATCATGTATCCAACGACGACGATTATTTGATCCATCAACACATAGGGCCGCTCTACCAATAGCTTCCTCCATCAAAAATCCAATTCCCTCCGTTGATTTCCTTCAAGTTTTCTGACAATTAGAGAAAAAAGAGAAAAAAATGTTTTTGAATTTAGTGGCTAATTATATTTCAAAATCTGATTTAGAGTTACTTTACTTGAGTGAATTTTTAGATTCATTAATTTCAATTTCTAACAACTTAAATTTTGAAGTTAGCATAATACTGATAATTACTTTTCTTAAAGTTGTCTCTTCCTTCCTTCTTTCTTTCTTTCTTTTTTTTGAAATAGGCCTAAAGTTGGGGTTGCTCCGAAATCCA

Coding sequence (CDS)

ATGGAAGGACCCGAATATTTCCAGCCCGGTTTTTGCTCTCAATTCGCCACCGAAAACCGCCAGTCCACCGATGCAAATAAAACCACCGTCGTCCAACCCTCCGCTGTTGCCGCCACTGCTGACCATTTCGTCGAGGACCTCTTAGATTTCTCTAATGACGACGACGTTGTCTTCACCGATGGAAATTTCGACAACCAAACCCCTACCTCCACCGATTCCTCCACTCTTACTTTACTCGATTCATGCAATTCCTACCCCAATTTCGAACAACACAACAATGCCCACAACTATAATTTCGCCGACGCCAATTTCTCCACCGACCTTGGTGTGCCGTACGATGACTTGGCGGAGCTGGAATGGCTTTCCAATTTCGTGGAAGACTCTTTCTCCACCGACGACTTGGAGAAGCTGAGTCTGATATCCGGGATGAATTCCCGGACTGACCATGACGATGACGCCTCAAAAACCCCAGAATTCCAGACCGGATTGAACCGGAACCACTCGTCATCCGGTTTCCGTCCCGAAATGTCGGTACCAGCTAAAGCCGCTCGTAGCAAGCGGTCTCGGGCGGCGCCCTGCATATGGAACTCCCGATTATCCGTACTCTCTCCCACAAATTCCTCTTCCGAAACCGACGTTGTCGTCACGCTCACGCCACATCCAAACACCGCCAAGAAAACCGCCAAGAAGAAAGAAATCCCGGACGACACGTCGTCCGCCGGCAATGGGGAAGGCCGTAAATGCCTCCATTGCGCCACCGACAAAACGCCGCAGTGGCGAACGGGCCCAATGGGCCCAAAGACTTTATGTAACGCTTGTGGGGTCCGGTACAAGTCCGGTCGTCTCGTACCGGAATACCGACCGGCGGCGAGCCCCACGTTTGTACTGACGAAACACTCGAATTCTCACCGGAAAGTTATGGAACTCCGACGGCAGAAGGAGATGATGAGAGCACAGCATCAACAACAGTATGTTCATCATGAGAGCATGGGGTTTGATCATGTATCCAACGACGACGATTATTTGATCCATCAACACATAGGGCCGCTCTACCAATAG

Protein sequence

MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHFVEDLLDFSNDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADANFSTDLGVPYDDLAELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKTPEFQTGLNRNHSSSGFRPEMSVPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDTSSAGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMRAQHQQQYVHHESMGFDHVSNDDDYLIHQHIGPLYQ

Homology

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BLAST of Lsi04G023280 vs. ExPASy Swiss-Prot
Match: P69781 (GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 6.2e-66
Identity = 176/335 (52.54%), Postives = 210/335 (62.69%), Query Frame = 0


Query: 39  TADHFVEDLL-DFSNDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNY 98
           T+D  V+DLL DFSNDDD           T T TDSS  +  D     P+F  H +  + 
Sbjct: 11  TSDFAVDDLLVDFSNDDDEENDVVADSTTTTTITDSSNFSAAD----LPSF--HGDVQD- 70

Query: 99  NFADANFSTDLGVPYDDLA-ELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKT 158
                +FS DL +P DDLA ELEWLSN V++S S +D+ KL LISG  SR D   D   +
Sbjct: 71  ---GTSFSGDLCIPSDDLADELEWLSNIVDESLSPEDVHKLELISGFKSRPDPKSDTG-S 130

Query: 159 PEFQTGLNRNHSSSGFRPEMSVPAKAARSKRSRAAPCIWNSRLSVLSPT--NSSSETDVV 218
           PE     N N SS  F  ++SVPAK ARSKRSRAA C W SR  +L  T  +S    + +
Sbjct: 131 PE-----NPNSSSPIFTTDVSVPAK-ARSKRSRAAACNWASR-GLLKETFYDSPFTGETI 190

Query: 219 VTLTPH--PNTA---------KKTA------KKKEIPDDTSSAGNGEGRKCLHCATDKTP 278
           ++   H  P T+         KK A      +KK++   +  +G  E R+CLHCATDKTP
Sbjct: 191 LSSQQHLSPPTSPPLLMAPLGKKQAVDGGHRRKKDV--SSPESGGAEERRCLHCATDKTP 250

Query: 279 QWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMR 338
           QWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVL KHSNSHRKVMELRRQKEM R
Sbjct: 251 QWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQKEMSR 310

Query: 339 AQHQQQYVHH---ESMGFDHVSNDDDYLIHQHIGP 350
           A H+  + HH    +M FD  S+ DDYLIH ++GP
Sbjct: 311 AHHEFIHHHHGTDTAMIFDVSSDGDDYLIHHNVGP 325

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BLAST of Lsi04G023280 vs. ExPASy Swiss-Prot
Match: O82632 (GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-58
Identity = 155/320 (48.44%), Postives = 195/320 (60.94%), Query Frame = 0


Query: 36  VAATADHF-VEDLLDFSNDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNA 95
           VA   D F V+DLLDFSNDD  V  DG   N  P S+  ST TL DS NS          
Sbjct: 11  VAGNPDSFVVDDLLDFSNDDGEV-DDGL--NTLPDSSTLSTGTLTDSSNS---------- 70

Query: 96  HNYNFADANFSTDLGVPYDDLAELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDAS 155
            +  F D    +DL +P DD+AELEWLSNFVE+SF+ +D +KL L SG+ +        +
Sbjct: 71  -SSLFTDGTGFSDLYIPNDDIAELEWLSNFVEESFAGEDQDKLHLFSGLKNPQTTGSTLT 130

Query: 156 KTPEFQTGLNRNHSSSGFRPEMSVPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVV 215
              + +  L+           ++VPAK ARSKRSR+A   W SRL  L+    S ET   
Sbjct: 131 HLIKPEPELDHQFIDID-ESNVAVPAK-ARSKRSRSAASTWASRLLSLA---DSDET--- 190

Query: 216 VTLTPHPNTAKKTAKKKEIPD--DTSSAGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNA 275
                +P   ++  K+++     D     +G GR+CLHCAT+KTPQWRTGPMGPKTLCNA
Sbjct: 191 -----NPKKKQRRVKEQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNA 250

Query: 276 CGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMRAQHQQQYVHHESMGF 335
           CGVRYKSGRLVPEYRPA+SPTFV+ +HSNSHRKVMELRRQKE MR +H    +  E++  
Sbjct: 251 CGVRYKSGRLVPEYRPASSPTFVMARHSNSHRKVMELRRQKE-MRDEHLLSQLRCENLLM 302

Query: 336 DHVSNDDDYLIH---QHIGP 350
           D  SN +D+L+H    H+ P
Sbjct: 311 DIRSNGEDFLMHNNTNHVAP 302

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BLAST of Lsi04G023280 vs. ExPASy Swiss-Prot
Match: O49743 (GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-40
Identity = 119/276 (43.12%), Postives = 155/276 (56.16%), Query Frame = 0


Query: 44  VEDLLDFSNDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADAN 103
           ++DLLDFSND+  +F+     + T TS+ +S+    ++  S+P     ++ +       +
Sbjct: 14  IDDLLDFSNDE--IFS----SSSTVTSSAASSAASSENPFSFP-----SSTYTSPTLLTD 73

Query: 104 FSTDLGVPYDDLAELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKTPEFQTGL 163
           F+ DL VP DD A LEWLS FV+DSFS      L++                        
Sbjct: 74  FTHDLCVPSDDAAHLEWLSRFVDDSFSDFPANPLTMT----------------------- 133

Query: 164 NRNHSSSGFRPEMSVPAKAARSKRSRA-APCIWNSRLSVLSPTNSSSETDVVVTLTPHPN 223
                    RPE+S   K  RS+RSRA AP       SV       SE+++        +
Sbjct: 134 --------VRPEISFTGK-PRSRRSRAPAP-------SVAGTWAPMSESELC------HS 193

Query: 224 TAKKTAKKKEIPDDTSSAGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 283
            AK   KK    +  ++ G    R+C HCA++KTPQWRTGP+GPKTLCNACGVRYKSGRL
Sbjct: 194 VAKPKPKKVYNAESVTADG---ARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 230

Query: 284 VPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMRA 319
           VPEYRPA+SPTFVLT+HSNSHRKVMELRRQKE   +
Sbjct: 254 VPEYRPASSPTFVLTQHSNSHRKVMELRRQKEQQES 230

[Close]

BLAST of Lsi04G023280 vs. ExPASy Swiss-Prot
Match: O49741 (GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-40
Identity = 129/298 (43.29%), Postives = 159/298 (53.36%), Query Frame = 0


Query: 44  VEDLLDFSNDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFAD-A 103
           ++DLLDFSN+D  +F+  +    T  ++ SS           P+F  H   H  + AD  
Sbjct: 14  IDDLLDFSNED--IFSASSSGGSTAATSSSSF-----PPPQNPSFHHH---HLPSSADHH 73

Query: 104 NFSTDLGVPYDDLAELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKTPEFQTG 163
           +F  D+ VP DD A LEWLS FV+DSF+      L                         
Sbjct: 74  SFLHDICVPSDDAAHLEWLSQFVDDSFADFPANPL------------------------- 133

Query: 164 LNRNHSSSGFRPEMSVPAKAARSKRSRA-APCIWNSRLSVLSPTNSSSETDVVVTLTPHP 223
                + +  + E S P K  RSKRSRA AP          SP    SE   +       
Sbjct: 134 ---GGTMTSVKTETSFPGK-PRSKRSRAPAPF-----AGTWSPMPLESEHQQL------- 193

Query: 224 NTAKKTAKKKEIP---------DDTSSAGNGEG---RKCLHCATDKTPQWRTGPMGPKTL 283
           ++A K   KKE             +SS+   EG   R+C HCA++KTPQWRTGP+GPKTL
Sbjct: 194 HSAAKFKPKKEQSGGGGGGGGRHQSSSSETTEGGGMRRCTHCASEKTPQWRTGPLGPKTL 253

Query: 284 CNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMRAQHQQQYVHH 328
           CNACGVR+KSGRLVPEYRPA+SPTFVLT+HSNSHRKVMELRRQKE+MR   Q Q  HH
Sbjct: 254 CNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKEVMRQPQQVQLHHH 260

[Close]

BLAST of Lsi04G023280 vs. ExPASy Swiss-Prot
Match: Q9SD38 (GATA transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=GATA6 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.7e-35
Identity = 118/299 (39.46%), Postives = 150/299 (50.17%), Query Frame = 0


Query: 41  DHFVEDLLDFS---NDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNY 100
           D  V+DLLDFS    DDDV+              D + L +             N  H  
Sbjct: 27  DFSVDDLLDFSKEEEDDDVLV------------EDEAELKV----QRKRGVSDENTLHRS 86

Query: 101 N-FADANFSTD-LGVPYDDLAELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASK 160
           N F+ A+F T  L VP DD+AELEWLSNFV+DS                S T +    +K
Sbjct: 87  NDFSTADFHTSGLSVPMDDIAELEWLSNFVDDS----------------SFTPYSAPTNK 146

Query: 161 TPEFQTGLNRNHSSSGFRPEMSV----PAKAARSKRSRAAPCIWNSRLSVLSPTNSSSET 220
            P + TG NR H     + E       PA   R KR+R    +W+     L+ ++SSS T
Sbjct: 147 -PVWLTG-NRRHLVQPVKEETCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTT 206

Query: 221 DVVVTLTPHPNT-------------AKKTAKKKEI---PDDTSSAGNGEGRKCLHCATDK 280
               + +P P++               KT KKK++      T +    + R+C HC   K
Sbjct: 207 S--SSSSPRPSSPLWLASGQFLDEPMTKTQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQK 266

Query: 281 TPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKE 315
           TPQWR GP+G KTLCNACGVRYKSGRL+PEYRPA SPTF    HSN H KV+E+RR+KE
Sbjct: 267 TPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKE 289

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BLAST of Lsi04G023280 vs. ExPASy TrEMBL
Match: A0A0A0LH13 (GATA transcription factor OS=Cucumis sativus OX=3659 GN=Csa_3G895650 PE=3 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 2.8e-170
Identity = 321/357 (89.92%), Postives = 327/357 (91.60%), Query Frame = 0


Query: 1   MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHF-VEDLLDFSNDDDVVFT 60
           MEGPEYFQPGF SQF+TE+RQS+DANKT     +A   TADHF VEDLLDFSNDDDVVFT
Sbjct: 1   MEGPEYFQPGFSSQFSTEDRQSSDANKTNTA--AAPPTTADHFIVEDLLDFSNDDDVVFT 60

Query: 61  DGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADANFSTDLGVPYDDLAELE 120
           DG FDNQTPTSTDSSTLTLLDSCNSYPN     NAHNY+FADANFSTDLGVPYDDLAELE
Sbjct: 61  DGTFDNQTPTSTDSSTLTLLDSCNSYPN---TGNAHNYHFADANFSTDLGVPYDDLAELE 120

Query: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRTD-HDDDASKTPEFQTGLNRNHSSSGFRPEMS- 180
           WLSNFVEDSFSTDDLEKLSLISGMNSR D HDDDASK  EFQTG NRNH S GFR EMS 
Sbjct: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRADVHDDDASKAREFQTGFNRNH-SPGFRHEMSV 180

Query: 181 VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDT 240
           VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKT KKKEIPDDT
Sbjct: 181 VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTTKKKEIPDDT 240

Query: 241 SSA--GNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 300
           SSA   NGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV
Sbjct: 241 SSAAGNNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 300

Query: 301 LTKHSNSHRKVMELRRQKEMMRAQHQQQYVHHESMGFDHVSNDDDYLIHQHIGPLYQ 353
           LTKHSNSHRKVMELRRQKEMMRAQ QQQY+HHESMGFDHVSNDDDYLIHQHIGPLYQ
Sbjct: 301 LTKHSNSHRKVMELRRQKEMMRAQQQQQYLHHESMGFDHVSNDDDYLIHQHIGPLYQ 351

[Close]

BLAST of Lsi04G023280 vs. ExPASy TrEMBL
Match: A0A5A7TAJ4 (GATA transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005060 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.5e-168
Identity = 316/357 (88.52%), Postives = 326/357 (91.32%), Query Frame = 0


Query: 1   MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHF-VEDLLDFSNDDDVVFT 60
           MEGPEYFQPGF SQF+TE+RQS+DANKTT    +    TADHF VEDLLDFSNDDDVVFT
Sbjct: 1   MEGPEYFQPGFSSQFSTEDRQSSDANKTTAA--AVPPTTADHFIVEDLLDFSNDDDVVFT 60

Query: 61  DGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADANFSTDLGVPYDDLAELE 120
           DG FDNQTPTSTDSS+LTLLDSCNSYPN     NAHNY+FADANFSTDLGVPYDDLAELE
Sbjct: 61  DGAFDNQTPTSTDSSSLTLLDSCNSYPN---TGNAHNYHFADANFSTDLGVPYDDLAELE 120

Query: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRTD-HDDDASKTPEFQTGLNRNHSSSGFRPEMS- 180
           WLSNFVEDSFSTDDLEKLSLISGMNS+TD HDDDASKT EFQ+G N  + S  FR EMS 
Sbjct: 121 WLSNFVEDSFSTDDLEKLSLISGMNSQTDVHDDDASKTREFQSGFNPRNHSPAFRHEMSV 180

Query: 181 VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDT 240
           VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKT KKKEIPDDT
Sbjct: 181 VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTTKKKEIPDDT 240

Query: 241 SSA--GNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 300
           SSA   NGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV
Sbjct: 241 SSAAGNNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 300

Query: 301 LTKHSNSHRKVMELRRQKEMMRAQHQQQYVHHESMGFDHVSNDDDYLIHQHIGPLYQ 353
           LTKHSNSHRKVMELRRQKEMMRAQ QQQY+HHESMGFDHVSNDDDYLIHQHIGPLYQ
Sbjct: 301 LTKHSNSHRKVMELRRQKEMMRAQQQQQYLHHESMGFDHVSNDDDYLIHQHIGPLYQ 352

[Close]

BLAST of Lsi04G023280 vs. ExPASy TrEMBL
Match: A0A1S3CQD2 (GATA transcription factor OS=Cucumis melo OX=3656 GN=LOC103503604 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.5e-168
Identity = 316/357 (88.52%), Postives = 326/357 (91.32%), Query Frame = 0


Query: 1   MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHF-VEDLLDFSNDDDVVFT 60
           MEGPEYFQPGF SQF+TE+RQS+DANKTT    +    TADHF VEDLLDFSNDDDVVFT
Sbjct: 1   MEGPEYFQPGFSSQFSTEDRQSSDANKTTAA--AVPPTTADHFIVEDLLDFSNDDDVVFT 60

Query: 61  DGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADANFSTDLGVPYDDLAELE 120
           DG FDNQTPTSTDSS+LTLLDSCNSYPN     NAHNY+FADANFSTDLGVPYDDLAELE
Sbjct: 61  DGAFDNQTPTSTDSSSLTLLDSCNSYPN---TGNAHNYHFADANFSTDLGVPYDDLAELE 120

Query: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRTD-HDDDASKTPEFQTGLNRNHSSSGFRPEMS- 180
           WLSNFVEDSFSTDDLEKLSLISGMNS+TD HDDDASKT EFQ+G N  + S  FR EMS 
Sbjct: 121 WLSNFVEDSFSTDDLEKLSLISGMNSQTDVHDDDASKTREFQSGFNPRNHSPAFRHEMSV 180

Query: 181 VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDT 240
           VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKT KKKEIPDDT
Sbjct: 181 VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTTKKKEIPDDT 240

Query: 241 SSA--GNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 300
           SSA   NGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV
Sbjct: 241 SSAAGNNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 300

Query: 301 LTKHSNSHRKVMELRRQKEMMRAQHQQQYVHHESMGFDHVSNDDDYLIHQHIGPLYQ 353
           LTKHSNSHRKVMELRRQKEMMRAQ QQQY+HHESMGFDHVSNDDDYLIHQHIGPLYQ
Sbjct: 301 LTKHSNSHRKVMELRRQKEMMRAQQQQQYLHHESMGFDHVSNDDDYLIHQHIGPLYQ 352

[Close]

BLAST of Lsi04G023280 vs. ExPASy TrEMBL
Match: A0A6J1FCT9 (GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111442834 PE=3 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.6e-131
Identity = 268/361 (74.24%), Postives = 286/361 (79.22%), Query Frame = 0


Query: 1   MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHF-VEDLLDFSNDDDVVFT 60
           ME P YF P     F+T+N  STD  +TT    +A AA ADHF VEDLLDFSNDD VVFT
Sbjct: 1   MEAPHYFHPA----FSTQNPHSTDTLETTT---TAAAAAADHFLVEDLLDFSNDDHVVFT 60

Query: 61  DGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADANFSTDLGVPYDDLAELE 120
           D   DNQTPTSTDSS LTLL+  N        N  HNY+F DANFSTDL VPYDDLAELE
Sbjct: 61  DATSDNQTPTSTDSSALTLLEQPN--------NGHHNYSFLDANFSTDLPVPYDDLAELE 120

Query: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKTPEFQTGLNRNHSSSGFRPEMSVP 180
           WLSNFVEDSFSTDDLEKLSLISG+NSRTD DD A+K  EFQTGL     S+GF P+MSVP
Sbjct: 121 WLSNFVEDSFSTDDLEKLSLISGVNSRTDDDDAAAKPREFQTGL-----SAGFHPDMSVP 180

Query: 181 AKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDTSS 240
           AKAARSKRSRA  CIWNSR+SVLSPTNSSSETDVVVTL     TAKK +KKKE PDDT S
Sbjct: 181 AKAARSKRSRA--CIWNSRVSVLSPTNSSSETDVVVTL-----TAKKPSKKKETPDDTLS 240

Query: 241 AGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 300
             NGEGRKCLHCATDKTPQWRTGP GPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH
Sbjct: 241 PSNGEGRKCLHCATDKTPQWRTGPFGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 300

Query: 301 SNSHRKVMELRRQKEMMRAQHQQQYVHH------ESMGFDHVSN--DDDYLIHQHIGPLY 353
           SNSHRKVMELRRQKEMMRAQ QQ + HH      E+M F+H SN  +DDYLIHQHI P+Y
Sbjct: 301 SNSHRKVMELRRQKEMMRAQQQQHHHHHQQQHHQETMEFNHASNNDNDDYLIHQHIAPIY 334

[Close]

BLAST of Lsi04G023280 vs. ExPASy TrEMBL
Match: A0A6J1IFE9 (GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111476755 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.4e-129
Identity = 267/361 (73.96%), Postives = 288/361 (79.78%), Query Frame = 0


Query: 1   MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHF-VEDLLDFSNDDDVVFT 60
           ME P YF P     F+T+N  S++  +TT    +A AA ADHF VEDLLDFSNDD VVFT
Sbjct: 1   MEAPHYFHPA----FSTQNPHSSNTLETT----AAAAAVADHFLVEDLLDFSNDDHVVFT 60

Query: 61  DGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADANFSTDLGVPYDDLAELE 120
           D   DNQTPTSTDSSTLTLL+  N        N  HNY+F DANFSTDL VPYDDLAELE
Sbjct: 61  DSTSDNQTPTSTDSSTLTLLEQPN--------NGHHNYSFLDANFSTDLAVPYDDLAELE 120

Query: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKTPEFQTGLNRNHSSSGFRPEMSVP 180
           WLSNFVEDSFSTDDLEKLSLISG+NSRTD DD A+K  EFQT L     S+GF P+MSVP
Sbjct: 121 WLSNFVEDSFSTDDLEKLSLISGVNSRTD-DDAAAKPREFQTEL-----SAGFHPDMSVP 180

Query: 181 AKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDTSS 240
           AKAARSKRSRA  CIWNSR+SVLSPTNSSSETDVVVTL     TAKKT+KKKE PDDT S
Sbjct: 181 AKAARSKRSRA--CIWNSRVSVLSPTNSSSETDVVVTL-----TAKKTSKKKETPDDTLS 240

Query: 241 AGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 300
             NGEGRKCLHCATDKTPQWRTGP GPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH
Sbjct: 241 PSNGEGRKCLHCATDKTPQWRTGPFGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 300

Query: 301 SNSHRKVMELRRQKEMMRAQ------HQQQYVHHESMGFDHVSN--DDDYLIHQHIGPLY 353
           SNSHRKVMELRRQKEMMRAQ       QQQ++H E+M F+H SN  +DDYLIHQHI P+Y
Sbjct: 301 SNSHRKVMELRRQKEMMRAQQQHHHHQQQQHLHQETMEFNHASNNDNDDYLIHQHIAPIY 332

[Close]

BLAST of Lsi04G023280 vs. NCBI nr
Match: XP_038897989.1 (GATA transcription factor 9-like [Benincasa hispida])

HSP 1 Score: 656.0 bits (1691), Expect = 1.9e-184
Identity = 332/353 (94.05%), Postives = 336/353 (95.18%), Query Frame = 0


Query: 1   MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHF-VEDLLDFSNDDDVVFT 60
           MEGPEYFQPGFCSQF TENRQS+DANKTTVV  SA AATADHF VEDLLDFSNDDDVVFT
Sbjct: 1   MEGPEYFQPGFCSQFPTENRQSSDANKTTVVPSSAAAATADHFIVEDLLDFSNDDDVVFT 60

Query: 61  DGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADANFSTDLGVPYDDLAELE 120
           DG FDNQTPTSTDSSTLTLLDSCNSYPNFEQHNN HNYNFADANFSTDLGVPYDDLAELE
Sbjct: 61  DGTFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNGHNYNFADANFSTDLGVPYDDLAELE 120

Query: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKTPEFQTGLNRNHSSSGFRPEMSVP 180
           WLSNFVEDSFS DDLEKLSLISGMNSRTDH+DDASKT EFQTGLNRNHS     P +SVP
Sbjct: 121 WLSNFVEDSFSADDLEKLSLISGMNSRTDHEDDASKTREFQTGLNRNHS-----PGLSVP 180

Query: 181 AKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDTSS 240
           AKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKE PDDTSS
Sbjct: 181 AKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKETPDDTSS 240

Query: 241 AGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 300
           AGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH
Sbjct: 241 AGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 300

Query: 301 SNSHRKVMELRRQKEMMRAQHQQQYVHHESMGFDHVSNDDDYLIHQHIGPLYQ 353
           SNSHRKVMELRRQKEMMRAQ QQQY+HHESMGFDHVSNDDDYLIHQHIGPLYQ
Sbjct: 301 SNSHRKVMELRRQKEMMRAQQQQQYLHHESMGFDHVSNDDDYLIHQHIGPLYQ 348

[Close]

BLAST of Lsi04G023280 vs. NCBI nr
Match: XP_011652614.1 (GATA transcription factor 9 [Cucumis sativus] >KGN60319.1 hypothetical protein Csa_000913 [Cucumis sativus])

HSP 1 Score: 607.8 bits (1566), Expect = 5.8e-170
Identity = 321/357 (89.92%), Postives = 327/357 (91.60%), Query Frame = 0


Query: 1   MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHF-VEDLLDFSNDDDVVFT 60
           MEGPEYFQPGF SQF+TE+RQS+DANKT     +A   TADHF VEDLLDFSNDDDVVFT
Sbjct: 1   MEGPEYFQPGFSSQFSTEDRQSSDANKTNTA--AAPPTTADHFIVEDLLDFSNDDDVVFT 60

Query: 61  DGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADANFSTDLGVPYDDLAELE 120
           DG FDNQTPTSTDSSTLTLLDSCNSYPN     NAHNY+FADANFSTDLGVPYDDLAELE
Sbjct: 61  DGTFDNQTPTSTDSSTLTLLDSCNSYPN---TGNAHNYHFADANFSTDLGVPYDDLAELE 120

Query: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRTD-HDDDASKTPEFQTGLNRNHSSSGFRPEMS- 180
           WLSNFVEDSFSTDDLEKLSLISGMNSR D HDDDASK  EFQTG NRNH S GFR EMS 
Sbjct: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRADVHDDDASKAREFQTGFNRNH-SPGFRHEMSV 180

Query: 181 VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDT 240
           VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKT KKKEIPDDT
Sbjct: 181 VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTTKKKEIPDDT 240

Query: 241 SSA--GNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 300
           SSA   NGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV
Sbjct: 241 SSAAGNNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 300

Query: 301 LTKHSNSHRKVMELRRQKEMMRAQHQQQYVHHESMGFDHVSNDDDYLIHQHIGPLYQ 353
           LTKHSNSHRKVMELRRQKEMMRAQ QQQY+HHESMGFDHVSNDDDYLIHQHIGPLYQ
Sbjct: 301 LTKHSNSHRKVMELRRQKEMMRAQQQQQYLHHESMGFDHVSNDDDYLIHQHIGPLYQ 351

[Close]

BLAST of Lsi04G023280 vs. NCBI nr
Match: XP_008466068.1 (PREDICTED: GATA transcription factor 9-like [Cucumis melo] >KAA0038621.1 GATA transcription factor 9-like [Cucumis melo var. makuwa] >TYK31220.1 GATA transcription factor 9-like [Cucumis melo var. makuwa])

HSP 1 Score: 600.5 bits (1547), Expect = 9.2e-168
Identity = 316/357 (88.52%), Postives = 326/357 (91.32%), Query Frame = 0


Query: 1   MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHF-VEDLLDFSNDDDVVFT 60
           MEGPEYFQPGF SQF+TE+RQS+DANKTT    +    TADHF VEDLLDFSNDDDVVFT
Sbjct: 1   MEGPEYFQPGFSSQFSTEDRQSSDANKTTAA--AVPPTTADHFIVEDLLDFSNDDDVVFT 60

Query: 61  DGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADANFSTDLGVPYDDLAELE 120
           DG FDNQTPTSTDSS+LTLLDSCNSYPN     NAHNY+FADANFSTDLGVPYDDLAELE
Sbjct: 61  DGAFDNQTPTSTDSSSLTLLDSCNSYPN---TGNAHNYHFADANFSTDLGVPYDDLAELE 120

Query: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRTD-HDDDASKTPEFQTGLNRNHSSSGFRPEMS- 180
           WLSNFVEDSFSTDDLEKLSLISGMNS+TD HDDDASKT EFQ+G N  + S  FR EMS 
Sbjct: 121 WLSNFVEDSFSTDDLEKLSLISGMNSQTDVHDDDASKTREFQSGFNPRNHSPAFRHEMSV 180

Query: 181 VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDT 240
           VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKT KKKEIPDDT
Sbjct: 181 VPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTTKKKEIPDDT 240

Query: 241 SSA--GNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 300
           SSA   NGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV
Sbjct: 241 SSAAGNNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 300

Query: 301 LTKHSNSHRKVMELRRQKEMMRAQHQQQYVHHESMGFDHVSNDDDYLIHQHIGPLYQ 353
           LTKHSNSHRKVMELRRQKEMMRAQ QQQY+HHESMGFDHVSNDDDYLIHQHIGPLYQ
Sbjct: 301 LTKHSNSHRKVMELRRQKEMMRAQQQQQYLHHESMGFDHVSNDDDYLIHQHIGPLYQ 352

[Close]

BLAST of Lsi04G023280 vs. NCBI nr
Match: XP_022936150.1 (GATA transcription factor 12-like [Cucurbita moschata])

HSP 1 Score: 478.4 bits (1230), Expect = 5.3e-131
Identity = 268/361 (74.24%), Postives = 286/361 (79.22%), Query Frame = 0


Query: 1   MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHF-VEDLLDFSNDDDVVFT 60
           ME P YF P     F+T+N  STD  +TT    +A AA ADHF VEDLLDFSNDD VVFT
Sbjct: 1   MEAPHYFHPA----FSTQNPHSTDTLETTT---TAAAAAADHFLVEDLLDFSNDDHVVFT 60

Query: 61  DGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADANFSTDLGVPYDDLAELE 120
           D   DNQTPTSTDSS LTLL+  N        N  HNY+F DANFSTDL VPYDDLAELE
Sbjct: 61  DATSDNQTPTSTDSSALTLLEQPN--------NGHHNYSFLDANFSTDLPVPYDDLAELE 120

Query: 121 WLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKTPEFQTGLNRNHSSSGFRPEMSVP 180
           WLSNFVEDSFSTDDLEKLSLISG+NSRTD DD A+K  EFQTGL     S+GF P+MSVP
Sbjct: 121 WLSNFVEDSFSTDDLEKLSLISGVNSRTDDDDAAAKPREFQTGL-----SAGFHPDMSVP 180

Query: 181 AKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDTSS 240
           AKAARSKRSRA  CIWNSR+SVLSPTNSSSETDVVVTL     TAKK +KKKE PDDT S
Sbjct: 181 AKAARSKRSRA--CIWNSRVSVLSPTNSSSETDVVVTL-----TAKKPSKKKETPDDTLS 240

Query: 241 AGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 300
             NGEGRKCLHCATDKTPQWRTGP GPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH
Sbjct: 241 PSNGEGRKCLHCATDKTPQWRTGPFGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 300

Query: 301 SNSHRKVMELRRQKEMMRAQHQQQYVHH------ESMGFDHVSN--DDDYLIHQHIGPLY 353
           SNSHRKVMELRRQKEMMRAQ QQ + HH      E+M F+H SN  +DDYLIHQHI P+Y
Sbjct: 301 SNSHRKVMELRRQKEMMRAQQQQHHHHHQQQHHQETMEFNHASNNDNDDYLIHQHIAPIY 334

[Close]

BLAST of Lsi04G023280 vs. NCBI nr
Match: XP_023535296.1 (GATA transcription factor 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.1 bits (1224), Expect = 2.6e-130
Identity = 267/356 (75.00%), Postives = 288/356 (80.90%), Query Frame = 0


Query: 1   MEGPEYFQPGFCSQFATENRQSTDANKTTVVQPSAVAATADHF-VEDLLDFSNDDDVVFT 60
           ME P YF P     F+T+N  S+D  +TT     A AA ADHF VEDLLDFSNDD VVFT
Sbjct: 1   MEAPHYFHPA----FSTQNPHSSDTLETT-----ATAAAADHFLVEDLLDFSNDDHVVFT 60

Query: 61  DGNFDNQTPTSTDSSTLTLLDSCNS-YPNFEQHNNAHNYNFADANFSTDLGVPYDDLAEL 120
           D   DNQTPTSTDSSTLTLL+  N+ + N+  H   HNY++ DANFSTDL VPYDDLAEL
Sbjct: 61  DATSDNQTPTSTDSSTLTLLEQPNNGHHNYSXH---HNYSYLDANFSTDLPVPYDDLAEL 120

Query: 121 EWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKTPEFQTGLNRNHSSSGFRPEMSV 180
           EWLSNFVEDSFSTDDLEKLSLISG+NSRTD DD A+K  EFQTG      S+GF P+MSV
Sbjct: 121 EWLSNFVEDSFSTDDLEKLSLISGVNSRTD-DDAAAKPREFQTG-----HSAGFHPDMSV 180

Query: 181 PAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTAKKKEIPDDTS 240
           PAKAARSKRSRA  CIWNSR+SVLSPTNSSSETDVVVTL     TAKK +KKKE PDDT 
Sbjct: 181 PAKAARSKRSRA--CIWNSRVSVLSPTNSSSETDVVVTL-----TAKKPSKKKETPDDTL 240

Query: 241 SAGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTK 300
           S  NGEGRKCLHCATDKTPQWRTGP GPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTK
Sbjct: 241 SPSNGEGRKCLHCATDKTPQWRTGPFGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTK 300

Query: 301 HSNSHRKVMELRRQKEMMRAQHQQQYVHHESMGFDHVSN--DDDYLIHQHIGPLYQ 353
           HSNSHRKVMELRRQKEMMRAQ QQQ  H E+M F+H SN  +DDYLIHQHI P+Y+
Sbjct: 301 HSNSHRKVMELRRQKEMMRAQQQQQQHHQETMEFNHASNNDNDDYLIHQHIAPIYE 331

[Close]

BLAST of Lsi04G023280 vs. TAIR 10
Match: AT5G25830.1 (GATA transcription factor 12 )

HSP 1 Score: 252.7 bits (644), Expect = 4.4e-67
Identity = 176/335 (52.54%), Postives = 210/335 (62.69%), Query Frame = 0


Query: 39  TADHFVEDLL-DFSNDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNY 98
           T+D  V+DLL DFSNDDD           T T TDSS  +  D     P+F  H +  + 
Sbjct: 11  TSDFAVDDLLVDFSNDDDEENDVVADSTTTTTITDSSNFSAAD----LPSF--HGDVQD- 70

Query: 99  NFADANFSTDLGVPYDDLA-ELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKT 158
                +FS DL +P DDLA ELEWLSN V++S S +D+ KL LISG  SR D   D   +
Sbjct: 71  ---GTSFSGDLCIPSDDLADELEWLSNIVDESLSPEDVHKLELISGFKSRPDPKSDTG-S 130

Query: 159 PEFQTGLNRNHSSSGFRPEMSVPAKAARSKRSRAAPCIWNSRLSVLSPT--NSSSETDVV 218
           PE     N N SS  F  ++SVPAK ARSKRSRAA C W SR  +L  T  +S    + +
Sbjct: 131 PE-----NPNSSSPIFTTDVSVPAK-ARSKRSRAAACNWASR-GLLKETFYDSPFTGETI 190

Query: 219 VTLTPH--PNTA---------KKTA------KKKEIPDDTSSAGNGEGRKCLHCATDKTP 278
           ++   H  P T+         KK A      +KK++   +  +G  E R+CLHCATDKTP
Sbjct: 191 LSSQQHLSPPTSPPLLMAPLGKKQAVDGGHRRKKDV--SSPESGGAEERRCLHCATDKTP 250

Query: 279 QWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMR 338
           QWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVL KHSNSHRKVMELRRQKEM R
Sbjct: 251 QWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQKEMSR 310

Query: 339 AQHQQQYVHH---ESMGFDHVSNDDDYLIHQHIGP 350
           A H+  + HH    +M FD  S+ DDYLIH ++GP
Sbjct: 311 AHHEFIHHHHGTDTAMIFDVSSDGDDYLIHHNVGP 325

[Close]

BLAST of Lsi04G023280 vs. TAIR 10
Match: AT4G32890.1 (GATA transcription factor 9 )

HSP 1 Score: 228.4 bits (581), Expect = 8.9e-60
Identity = 155/320 (48.44%), Postives = 195/320 (60.94%), Query Frame = 0


Query: 36  VAATADHF-VEDLLDFSNDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNA 95
           VA   D F V+DLLDFSNDD  V  DG   N  P S+  ST TL DS NS          
Sbjct: 11  VAGNPDSFVVDDLLDFSNDDGEV-DDGL--NTLPDSSTLSTGTLTDSSNS---------- 70

Query: 96  HNYNFADANFSTDLGVPYDDLAELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDAS 155
            +  F D    +DL +P DD+AELEWLSNFVE+SF+ +D +KL L SG+ +        +
Sbjct: 71  -SSLFTDGTGFSDLYIPNDDIAELEWLSNFVEESFAGEDQDKLHLFSGLKNPQTTGSTLT 130

Query: 156 KTPEFQTGLNRNHSSSGFRPEMSVPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVV 215
              + +  L+           ++VPAK ARSKRSR+A   W SRL  L+    S ET   
Sbjct: 131 HLIKPEPELDHQFIDID-ESNVAVPAK-ARSKRSRSAASTWASRLLSLA---DSDET--- 190

Query: 216 VTLTPHPNTAKKTAKKKEIPD--DTSSAGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNA 275
                +P   ++  K+++     D     +G GR+CLHCAT+KTPQWRTGPMGPKTLCNA
Sbjct: 191 -----NPKKKQRRVKEQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNA 250

Query: 276 CGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMRAQHQQQYVHHESMGF 335
           CGVRYKSGRLVPEYRPA+SPTFV+ +HSNSHRKVMELRRQKE MR +H    +  E++  
Sbjct: 251 CGVRYKSGRLVPEYRPASSPTFVMARHSNSHRKVMELRRQKE-MRDEHLLSQLRCENLLM 302

Query: 336 DHVSNDDDYLIH---QHIGP 350
           D  SN +D+L+H    H+ P
Sbjct: 311 DIRSNGEDFLMHNNTNHVAP 302

[Close]

BLAST of Lsi04G023280 vs. TAIR 10
Match: AT3G60530.1 (GATA transcription factor 4 )

HSP 1 Score: 168.7 bits (426), Expect = 8.4e-42
Identity = 119/276 (43.12%), Postives = 155/276 (56.16%), Query Frame = 0


Query: 44  VEDLLDFSNDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFADAN 103
           ++DLLDFSND+  +F+     + T TS+ +S+    ++  S+P     ++ +       +
Sbjct: 14  IDDLLDFSNDE--IFS----SSSTVTSSAASSAASSENPFSFP-----SSTYTSPTLLTD 73

Query: 104 FSTDLGVPYDDLAELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKTPEFQTGL 163
           F+ DL VP DD A LEWLS FV+DSFS      L++                        
Sbjct: 74  FTHDLCVPSDDAAHLEWLSRFVDDSFSDFPANPLTMT----------------------- 133

Query: 164 NRNHSSSGFRPEMSVPAKAARSKRSRA-APCIWNSRLSVLSPTNSSSETDVVVTLTPHPN 223
                    RPE+S   K  RS+RSRA AP       SV       SE+++        +
Sbjct: 134 --------VRPEISFTGK-PRSRRSRAPAP-------SVAGTWAPMSESELC------HS 193

Query: 224 TAKKTAKKKEIPDDTSSAGNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 283
            AK   KK    +  ++ G    R+C HCA++KTPQWRTGP+GPKTLCNACGVRYKSGRL
Sbjct: 194 VAKPKPKKVYNAESVTADG---ARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 230

Query: 284 VPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMRA 319
           VPEYRPA+SPTFVLT+HSNSHRKVMELRRQKE   +
Sbjct: 254 VPEYRPASSPTFVLTQHSNSHRKVMELRRQKEQQES 230

[Close]

BLAST of Lsi04G023280 vs. TAIR 10
Match: AT2G45050.1 (GATA transcription factor 2 )

HSP 1 Score: 167.5 bits (423), Expect = 1.9e-41
Identity = 129/298 (43.29%), Postives = 159/298 (53.36%), Query Frame = 0


Query: 44  VEDLLDFSNDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNYNFAD-A 103
           ++DLLDFSN+D  +F+  +    T  ++ SS           P+F  H   H  + AD  
Sbjct: 14  IDDLLDFSNED--IFSASSSGGSTAATSSSSF-----PPPQNPSFHHH---HLPSSADHH 73

Query: 104 NFSTDLGVPYDDLAELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASKTPEFQTG 163
           +F  D+ VP DD A LEWLS FV+DSF+      L                         
Sbjct: 74  SFLHDICVPSDDAAHLEWLSQFVDDSFADFPANPL------------------------- 133

Query: 164 LNRNHSSSGFRPEMSVPAKAARSKRSRA-APCIWNSRLSVLSPTNSSSETDVVVTLTPHP 223
                + +  + E S P K  RSKRSRA AP          SP    SE   +       
Sbjct: 134 ---GGTMTSVKTETSFPGK-PRSKRSRAPAPF-----AGTWSPMPLESEHQQL------- 193

Query: 224 NTAKKTAKKKEIP---------DDTSSAGNGEG---RKCLHCATDKTPQWRTGPMGPKTL 283
           ++A K   KKE             +SS+   EG   R+C HCA++KTPQWRTGP+GPKTL
Sbjct: 194 HSAAKFKPKKEQSGGGGGGGGRHQSSSSETTEGGGMRRCTHCASEKTPQWRTGPLGPKTL 253

Query: 284 CNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMRAQHQQQYVHH 328
           CNACGVR+KSGRLVPEYRPA+SPTFVLT+HSNSHRKVMELRRQKE+MR   Q Q  HH
Sbjct: 254 CNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKEVMRQPQQVQLHHH 260

[Close]

BLAST of Lsi04G023280 vs. TAIR 10
Match: AT3G51080.1 (GATA transcription factor 6 )

HSP 1 Score: 149.8 bits (377), Expect = 4.0e-36
Identity = 118/299 (39.46%), Postives = 150/299 (50.17%), Query Frame = 0


Query: 41  DHFVEDLLDFS---NDDDVVFTDGNFDNQTPTSTDSSTLTLLDSCNSYPNFEQHNNAHNY 100
           D  V+DLLDFS    DDDV+              D + L +             N  H  
Sbjct: 27  DFSVDDLLDFSKEEEDDDVLV------------EDEAELKV----QRKRGVSDENTLHRS 86

Query: 101 N-FADANFSTD-LGVPYDDLAELEWLSNFVEDSFSTDDLEKLSLISGMNSRTDHDDDASK 160
           N F+ A+F T  L VP DD+AELEWLSNFV+DS                S T +    +K
Sbjct: 87  NDFSTADFHTSGLSVPMDDIAELEWLSNFVDDS----------------SFTPYSAPTNK 146

Query: 161 TPEFQTGLNRNHSSSGFRPEMSV----PAKAARSKRSRAAPCIWNSRLSVLSPTNSSSET 220
            P + TG NR H     + E       PA   R KR+R    +W+     L+ ++SSS T
Sbjct: 147 -PVWLTG-NRRHLVQPVKEETCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTT 206

Query: 221 DVVVTLTPHPNT-------------AKKTAKKKEI---PDDTSSAGNGEGRKCLHCATDK 280
               + +P P++               KT KKK++      T +    + R+C HC   K
Sbjct: 207 S--SSSSPRPSSPLWLASGQFLDEPMTKTQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQK 266

Query: 281 TPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKE 315
           TPQWR GP+G KTLCNACGVRYKSGRL+PEYRPA SPTF    HSN H KV+E+RR+KE
Sbjct: 267 TPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKE 289

The following BLAST results are available for this feature:

BLAST of Lsi04G023280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P69781	6.2e-66	52.54	GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1	[more]
O82632	1.3e-58	48.44	GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1	[more]
O49743	1.2e-40	43.12	GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1	[more]
O49741	2.6e-40	43.29	GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1	[more]
Q9SD38	5.7e-35	39.46	GATA transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=GATA6 PE=2 SV=1	[more]

BLAST of Lsi04G023280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH13	2.8e-170	89.92	GATA transcription factor OS=Cucumis sativus OX=3659 GN=Csa_3G895650 PE=3 SV=1	[more]
A0A5A7TAJ4	4.5e-168	88.52	GATA transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CQD2	4.5e-168	88.52	GATA transcription factor OS=Cucumis melo OX=3656 GN=LOC103503604 PE=3 SV=1	[more]
A0A6J1FCT9	2.6e-131	74.24	GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111442834 PE=3 SV=...	[more]
A0A6J1IFE9	1.4e-129	73.96	GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111476755 PE=3 SV=1	[more]

BLAST of Lsi04G023280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897989.1	1.9e-184	94.05	GATA transcription factor 9-like [Benincasa hispida]	[more]
XP_011652614.1	5.8e-170	89.92	GATA transcription factor 9 [Cucumis sativus] >KGN60319.1 hypothetical protein C...	[more]
XP_008466068.1	9.2e-168	88.52	PREDICTED: GATA transcription factor 9-like [Cucumis melo] >KAA0038621.1 GATA tr...	[more]
XP_022936150.1	5.3e-131	74.24	GATA transcription factor 12-like [Cucurbita moschata]	[more]
XP_023535296.1	2.6e-130	75.00	GATA transcription factor 12-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi04G023280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25830.1	4.4e-67	52.54	GATA transcription factor 12	[more]
AT4G32890.1	8.9e-60	48.44	GATA transcription factor 9	[more]
AT3G60530.1	8.4e-42	43.12	GATA transcription factor 4	[more]
AT2G45050.1	1.9e-41	43.29	GATA transcription factor 2	[more]
AT3G51080.1	4.0e-36	39.46	GATA transcription factor 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 242..292 e-value: 4.7E-18 score: 76.0
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 248..281 e-value: 3.2E-15 score: 55.4
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 248..273
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 242..278 score: 12.558201
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 247..294 e-value: 4.2176E-15 score: 67.0126
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 243..327 e-value: 2.2E-15 score: 58.4
IPR016679	Transcription factor, GATA, plant	PIRSF	PIRSF016992	Txn_fac_GATA_plant	coord: 21..338 e-value: 6.2E-82 score: 273.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..173
None	No IPR available	PANTHER	PTHR45658	GATA TRANSCRIPTION FACTOR	coord: 1..351
None	No IPR available	PANTHER	PTHR45658:SF43	GATA TRANSCRIPTION FACTOR	coord: 1..351
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 243..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G023280.1	Lsi04G023280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003677	DNA binding