Lsi04G020060 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAATTCAGCTCTCTCTCATGTCTCCAATGGCGGACGATCCGCCATTGCCGTCCTCAATTTCCTCTGTATTTCTCTCTTAATCTCTTCCTCCTTCCAAATCGGTCTCGTTAAAGCCATCATTCACGATCCTCTCTCTAACAACATTTTCTTACCTTCTGAAATCCAGAACAATGAGAGAGATAATCTCCAATTGCGTACCTGTACCAAAGTCAATCCCTTGCTCTACTACCGCCCGGTGATTGGAATCCTTTCTCATCCCGGCGACGGCGCCTCCGGTAGGCTCACTAATGCCACCACCGCTTCGTATATTCCGGCGTCCTACGTCAAGTTCGTCGAATCCGCCGGTGCTAGAGTTATTCCTCTTATCTATAACGACCCGACTGATGTTCTCGAAGAGGTAACAAACTAACGATTTTGTGTTGAGAAATCAAATGCACTGTTATTGCATGATGTGGATCCAACTATCCAATATTTGAAATGATAGTTGATGTCATATCTGTTAAGTTATCTTTGGATTGACTATATACTAATTAATCAACTCTACAACAAAAAGTAAAGTCTATTTAAATACGTTCCAAAAAAACTAGGTAACAATATTCTATGAATTATGAATAATAATAAAAAAAAGCATTATGATTGCAAATTTTTTTTTATTATAGAGTAGTAATCATGGCCTAAATTGTACTTGAACTTTTGAGTTTAGTGGAACCAGAAACATTGTGCCAATTTTTTAAGACAAAATCTCGAAAAGAAGAGCCTACCTAAAGAGATTTGTTGTGAAAAACCTAAGTTGAATCTTCACTACTTTTGTTGGGATACAAACATATATACAGTATGGATAAGACAACATACATCTTCATTGACACGAGACATTTGAAGCAAAGTTCAGAGAATAAAACATGTGAGTGTAAATAAAAGATACGACATGACAGATTTACATCATTATCAGGACCTTCTTAAATTGATTTGACAAGAATCAGTCAATTCAAACATAACTAAATGGATAAGAAGTTAGAAATTTACCTCTGTCTTAACTTTTAAAAAATATACAAGATTGTAAAAGAAATTTAAACTTTTAAAAAAAATTAGGGAAATTTTTAAAAATAGAAAAATAAGGAAAACTATTTACACAAAATAGCAAAATTTTTAGATAGTTGTAATAGACGCTGATACAAGTCAGTGATGGAAATGATAAAGGTCTATCAATGTATATCAATGTTTTTTTTTTCTATTTTCTATAAATAGTTTGACATTTTTTCTATCGGTAAAATTTTTCCAAAAAATTAATTATGAATATGATTTTGCCAAAATATATTTTGAATGTTTTTTTTGTTTATATTTATTTTTAATGCAGAAGCTGGGTTACCGGAGGGAGGGCTAGAGATGGGTTATATTATTCAGTGGCTGAGACAATATTCCAGGTAATATTTCATATATACGGCTATTTCTCTTCTCTTGTGTGTTCTTTTAATATAAAAATTATTTATTTATTATTATTATTATTTGGATGCAGAAAGTTTTGAGTAGGAATGAGGCTGGGGATCATGTTCCTTTATATGGCATTTCCTTGGGTTTTCAGCTCATTAGTACAATGGTCAGCAAGGTAATTGGTGAACCCATTCATTACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGATTTCTCCTTTCATAGTCTACTTTAGGCATAATCTTAAAAAGTTAATCTTTTAGAAAAAAATAAAAATAAAAAAATCATTTAGAAAAAATATATTTTTGTCACATGTCAATTTTTTATTAGACAACTTAGGCTGCACAAAAATAAGTGTAATTAGACAACACTTAAGTTTTTCTCTTTTTATTTTGATCTTTACATAACCCTGACATTATCGAGCCATTTAATGCCACACGTTTTTCATTTGCCTTGAGATTTAACGATTTTGCAAATATTCGAGGAACCGTCTTTGAAAGGTATGCACTTTTTTTTAAAACAATATGTGGGTGAGATATTTTCAAAGTGATAGTACATACTTAGTACTTGATGTCAGTTAACCTATGCTTATTTTGGCCACTTACTATTCCATTAATACAATATTTCTTATAAATTATGATTATTTAATGACATTTAAAATTGAAATTTCTATGTTATTTCTTTGTAGAGTTCCACTCCCTTTACGAATAAGGGCGACTAAGGATTGTATTACATGAAAAGATCATAAAGTGAGTTTTATATATTTATTTTTTAATTTTTATTTTTAATCACATGTGGAATGAGAAATCAAACCTTTGATTTTAAAGTCAATAGAACTAACTTTATGTCAGTTCAATTATTTTTATGTTGTTGGAAAAATATCTTTTTAATCTTTAAGAGTTTTGAGTTTAGTTTCCATTTGGTCACTAGATTTTGAAATTTTACACTTACTTTTGAGTTTGAGTTTTGTTTTCATTTAGTCCATACATTTCGAAAAATATATTTTTATATTGATTTTACTTTTGATCGGTAGGATTGATGTCTATTACTTAATTTAAAAGAATTATAATGAATTATTTTCACTAATTTTTTATCACTAGTAATTAAAATTAATTTTAAATGACTTCATAATTTCTTTTAAATTAATTAACTAGAAAATTAATATATTAGCAAAAACTCGAGATAAAATTGTAATAGACTGAAATTTTGAGACTAAATGAATACTAAATCCAAAATTTAAAGGATGATAAAATTAGAGGTAACATTTTGAAACTTAAAAACCAAATTTAAATTAAACTCAAAACTTAAAATTAAAAGTGTAATATTTTAAAATCTAAGAACTAAATAAAAATTAGACCAAAAAAATTTTAAAAACTATTATTTTTTCCTTGAATAATTGTCCAAATTAGATTATATGCCAATGCTGATTAATTATCTTGTTGTTAATTTGTTGAATACAGTATGGCATCTCACCTCAAACCTTTGAACAAAATGAAGGGTTATCTAGCTTTTTCCAAATATTGAGAACTAGCACTGACAAGAACAATAAGGTAATTTTATACCTATTCTCTCTTTACAAATTTAGAAAAATGAATCAAAACTATCAGACTTTTTTCAAATATAGAAAAATAAGTCAAATTATTAATAAATATAGAAAATTTTTACCGTCTATCATTGATAGACAGTCAAATCTTTCTATTTGGGTAAATAGTTTGATATTTTTTTCTGTTTATAGTAATTTTCCTAAAATAAATCTATCTATTTTTAGCCTTTTAATTTTTGAGATATTCTTATGGTTGTACCATTGTAATTAGGTCAATGTTTCTACCGCAAATGCTCGAAATTATCCAGTAACTATCTTTCAATGGAATCCCGAGGTAATTCATCTTTCAATATACTAA ATGTTCAATTCAGCTCTCTCTCATGTCTCCAATGGCGGACGATCCGCCATTGCCGTCCTCAATTTCCTCTGTATTTCTCTCTTAATCTCTTCCTCCTTCCAAATCGGTCTCGTTAAAGCCATCATTCACGATCCTCTCTCTAACAACATTTTCTTACCTTCTGAAATCCAGAACAATGAGAGAGATAATCTCCAATTGCGTACCTGTACCAAAGTCAATCCCTTGCTCTACTACCGCCCGGTGATTGGAATCCTTTCTCATCCCGGCGACGGCGCCTCCGGTAGGCTCACTAATGCCACCACCGCTTCGTATATTCCGGCGTCCTACGTCAAGTTCGTCGAATCCGCCGGTGCTAGAGTTATTCCTCTTATCTATAACGACCCGACTGATGTTCTCGAAGAGAAAGTTTTGAGTAGGAATGAGGCTGGGGATCATGTTCCTTTATATGGCATTTCCTTGGGTTTTCAGCTCATTAGTACAATGGTCAGCAAGTATGGCATCTCACCTCAAACCTTTGAACAAAATGAAGGGTTATCTAGCTTTTTCCAAATATTGAGAACTAGCACTGACAAGAACAATAAGGTCAATGTTTCTACCGCAAATGCTCGAAATTATCCAGTAACTATCTTTCAATGGAATCCCGAGGTAATTCATCTTTCAATATACTAA ATGTTCAATTCAGCTCTCTCTCATGTCTCCAATGGCGGACGATCCGCCATTGCCGTCCTCAATTTCCTCTGTATTTCTCTCTTAATCTCTTCCTCCTTCCAAATCGGTCTCGTTAAAGCCATCATTCACGATCCTCTCTCTAACAACATTTTCTTACCTTCTGAAATCCAGAACAATGAGAGAGATAATCTCCAATTGCGTACCTGTACCAAAGTCAATCCCTTGCTCTACTACCGCCCGGTGATTGGAATCCTTTCTCATCCCGGCGACGGCGCCTCCGGTAGGCTCACTAATGCCACCACCGCTTCGTATATTCCGGCGTCCTACGTCAAGTTCGTCGAATCCGCCGGTGCTAGAGTTATTCCTCTTATCTATAACGACCCGACTGATGTTCTCGAAGAGAAAGTTTTGAGTAGGAATGAGGCTGGGGATCATGTTCCTTTATATGGCATTTCCTTGGGTTTTCAGCTCATTAGTACAATGGTCAGCAAGTATGGCATCTCACCTCAAACCTTTGAACAAAATGAAGGGTTATCTAGCTTTTTCCAAATATTGAGAACTAGCACTGACAAGAACAATAAGGTCAATGTTTCTACCGCAAATGCTCGAAATTATCCAGTAACTATCTTTCAATGGAATCCCGAGGTAATTCATCTTTCAATATACTAA MFNSALSHVSNGGRSAIAVLNFLCISLLISSSFQIGLVKAIIHDPLSNNIFLPSEIQNNERDNLQLRTCTKVNPLLYYRPVIGILSHPGDGASGRLTNATTASYIPASYVKFVESAGARVIPLIYNDPTDVLEEKVLSRNEAGDHVPLYGISLGFQLISTMVSKYGISPQTFEQNEGLSSFFQILRTSTDKNNKVNVSTANARNYPVTIFQWNPEVIHLSIY Homology
BLAST of Lsi04G020060 vs. ExPASy Swiss-Prot
Match: Q9SYL6 (Gamma-glutamyl hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=GGH1 PE=2 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 4.4e-41 Identity = 101/250 (40.40%), Postives = 129/250 (51.60%), Query Frame = 0
BLAST of Lsi04G020060 vs. ExPASy Swiss-Prot
Match: O65355 (Gamma-glutamyl hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=GGH2 PE=1 SV=2) HSP 1 Score: 155.2 bits (391), Expect = 8.5e-37 Identity = 101/276 (36.59%), Postives = 136/276 (49.28%), Query Frame = 0
BLAST of Lsi04G020060 vs. ExPASy Swiss-Prot
Match: P93164 (Gamma-glutamyl hydrolase OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35 Identity = 97/260 (37.31%), Postives = 126/260 (48.46%), Query Frame = 0
BLAST of Lsi04G020060 vs. ExPASy Swiss-Prot
Match: Q9ZV85 (Probable gamma-glutamyl hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=GGH3 PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 3.1e-31 Identity = 92/275 (33.45%), Postives = 131/275 (47.64%), Query Frame = 0
BLAST of Lsi04G020060 vs. ExPASy Swiss-Prot
Match: Q54LN4 (Gamma-glutamyl hydrolase A OS=Dictyostelium discoideum OX=44689 GN=gghA PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.6e-17 Identity = 65/231 (28.14%), Postives = 99/231 (42.86%), Query Frame = 0
BLAST of Lsi04G020060 vs. ExPASy TrEMBL
Match: A0A0A0KZI0 (Folate gamma-glutamyl hydrolase OS=Cucumis sativus OX=3659 GN=Csa_4G627110 PE=3 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 2.4e-82 Identity = 181/277 (65.34%), Postives = 196/277 (70.76%), Query Frame = 0
BLAST of Lsi04G020060 vs. ExPASy TrEMBL
Match: A0A0A0L214 (Folate gamma-glutamyl hydrolase OS=Cucumis sativus OX=3659 GN=Csa_4G627100 PE=3 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 9.3e-79 Identity = 175/297 (58.92%), Postives = 189/297 (63.64%), Query Frame = 0
BLAST of Lsi04G020060 vs. ExPASy TrEMBL
Match: A0A6J1C412 (Folate gamma-glutamyl hydrolase OS=Momordica charantia OX=3673 GN=LOC111008284 PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 3.8e-72 Identity = 166/296 (56.08%), Postives = 185/296 (62.50%), Query Frame = 0
BLAST of Lsi04G020060 vs. ExPASy TrEMBL
Match: A0A2P5FL13 (Folate gamma-glutamyl hydrolase OS=Trema orientale OX=63057 GN=TorRG33x02_057260 PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 4.1e-50 Identity = 116/224 (51.79%), Postives = 143/224 (63.84%), Query Frame = 0
BLAST of Lsi04G020060 vs. ExPASy TrEMBL
Match: A0A6P5SDB8 (Folate gamma-glutamyl hydrolase OS=Prunus avium OX=42229 GN=LOC110757564 PE=3 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 6.1e-46 Identity = 119/276 (43.12%), Postives = 149/276 (53.99%), Query Frame = 0
BLAST of Lsi04G020060 vs. NCBI nr
Match: XP_038899600.1 (gamma-glutamyl hydrolase 2-like [Benincasa hispida]) HSP 1 Score: 354.4 bits (908), Expect = 7.3e-94 Identity = 199/297 (67.00%), Postives = 207/297 (69.70%), Query Frame = 0
BLAST of Lsi04G020060 vs. NCBI nr
Match: XP_031739802.1 (gamma-glutamyl hydrolase 2 [Cucumis sativus]) HSP 1 Score: 307.4 bits (786), Expect = 1.0e-79 Identity = 182/301 (60.47%), Postives = 196/301 (65.12%), Query Frame = 0
BLAST of Lsi04G020060 vs. NCBI nr
Match: XP_011654039.1 (gamma-glutamyl hydrolase 2 [Cucumis sativus] >KGN55059.1 hypothetical protein Csa_011933 [Cucumis sativus]) HSP 1 Score: 303.1 bits (775), Expect = 1.9e-78 Identity = 175/297 (58.92%), Postives = 189/297 (63.64%), Query Frame = 0
BLAST of Lsi04G020060 vs. NCBI nr
Match: XP_022136626.1 (gamma-glutamyl hydrolase 1-like [Momordica charantia]) HSP 1 Score: 281.2 bits (718), Expect = 7.8e-72 Identity = 166/296 (56.08%), Postives = 185/296 (62.50%), Query Frame = 0
BLAST of Lsi04G020060 vs. NCBI nr
Match: KAE8649824.1 (hypothetical protein Csa_012533 [Cucumis sativus]) HSP 1 Score: 243.0 bits (619), Expect = 2.4e-60 Identity = 140/206 (67.96%), Postives = 153/206 (74.27%), Query Frame = 0
BLAST of Lsi04G020060 vs. TAIR 10
Match: AT1G78660.2 (gamma-glutamyl hydrolase 1 ) HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42 Identity = 106/275 (38.55%), Postives = 138/275 (50.18%), Query Frame = 0
BLAST of Lsi04G020060 vs. TAIR 10
Match: AT1G78660.1 (gamma-glutamyl hydrolase 1 ) HSP 1 Score: 169.5 bits (428), Expect = 3.1e-42 Identity = 101/250 (40.40%), Postives = 129/250 (51.60%), Query Frame = 0
BLAST of Lsi04G020060 vs. TAIR 10
Match: AT1G78660.3 (gamma-glutamyl hydrolase 1 ) HSP 1 Score: 169.5 bits (428), Expect = 3.1e-42 Identity = 101/250 (40.40%), Postives = 129/250 (51.60%), Query Frame = 0
BLAST of Lsi04G020060 vs. TAIR 10
Match: AT1G78680.1 (gamma-glutamyl hydrolase 2 ) HSP 1 Score: 155.2 bits (391), Expect = 6.0e-38 Identity = 101/276 (36.59%), Postives = 136/276 (49.28%), Query Frame = 0
BLAST of Lsi04G020060 vs. TAIR 10
Match: AT1G78680.2 (gamma-glutamyl hydrolase 2 ) HSP 1 Score: 155.2 bits (391), Expect = 6.0e-38 Identity = 101/276 (36.59%), Postives = 136/276 (49.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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