Lsi04G018390 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACCAGAGAACGGCCTTTCCAAAAATTTCTCTCACTTTTGTGCTTCGAAAAGACCCCATCGATTCCTTTCGACCCTTTTTCTGAGCTTTATCCGATTGCAAAGCAGTAACCCAATTGCGAATTTGAAGCTTTCAATGGTAATTATTTGTCTTTTTTCCTTTTTCTTTTCCTTTTCGTTTCTCTTTTTTATCCTCGTTCAGCCTTTAATGGTGGGTATTAAGATCTCTGTGCCTCGATTAAAGTGTAGAAGAACTTTTATTTTCCTTCTTCTTCTCCTTCTTCACGTGCACCCCACGAATTTGAAAAAGGCTTGTGTGTGTGTGTATATATATATTTTATTTATGTTCTTTTTTGCTTTTTCTTCTTTGTAGTTCTTCAGCTGGATGGTTTCTGGGTTTCCGGCTTGAGGGTATGTGGCAATTGTTGTCATTCTGTTTCGTTGTTTCTGTTAGATTTTGTTGATTTAGTTTGAAGGGGTTTTTTCTTTTCCCCTTAATTCATAGTTTTTATGATTGTTATTTGAATAACTGTTGGAATCTGACTATTGAGAAGTTCTTATCTGATTTTGGGGTGTTCTGAAATTCTTTTTTTATATCCTTCTGTGATTTTTCTTTTTGGAACTTGCCTGCAACTTTTGCCTCTCTCTCTCTCTCTCCTTCTCTCACAGTACATTTTGGAGTTTTTGCTGTTGAATGATGATAATTTCTTTTGTACTTGTTGAAAATTGAGTAGAACGTATGATTTCAATTCACTCTGAATTGGTGCAACTTTCTGTAATGGCTTGAAATGCTGTGGAATTGAAGCTTGTAGTTTGTACATTGAGCCATGAGGTAATAACCTTTGGGAGAATTAAAATGCAAATATGTGATTATTGTGACCTCCACATGGCACTCTTTGAGTCTTTAATTCCTTACTAAAGTTGATTGTTGATTTAACATGGTATTTGACTAAGAGGTCTTACGTTAGAACTCCTTAAATGTCACTTCCTCCCAAATTAATATTGATTTCCACTTGTAGGGCTTTCTACAAAATTTCAAACCTACAAGTGAAGAGAGTGTTCAAGTATTGATATAATTAAATTTACCGTAACCCATCTGCTTAAACTTTTGGGTTTATCGATGATGCATAAAGCTTCTATTTTAAGTATATGTTCCACATCCTAGTCATTGCTTTAAGTTTTGGTTTTAGCACTTAACATATTTGAAGAAAATTTTGTCAACCTTTGATTCCTAAGGACTATTAATGGATATTATCTTAATACCTTTTTGGGGCTTTCTCCATTTGTGTACTTTATATGATGTAGGATCCTATAGTTGTAGATTACACTTAGTGGACGGAGCTCCTTACAATTATAACTATTTTTAAAGTGGGCTACTTGATTTGAGTTTTCATACTTAATTTACCAAAGTATATAGGATTATATTATTACAGGAACTTGACCTTCTGCAGAGTAGTTGTGACTATGAAATGGTTGTTTCTGTTCACATTGTACAATTAAAACCGACAGAGTAATATGTTATTCTTATTGAAGAGCTCTGTTGTTGAATATTTTTCGAAAATTGACATCCCGGGTCGAAAATTGATATCAGGCTCTGGTTTTTCTTGCTTCTCAGTGTATCAGTTTCCTTTTAGTATATGGATTGGAACTTCATTGATCTATGATTCCATGAATGCCTCATCTGATTTTCATTGTTTTTCTTTTTCAAAATTGTGGTTGATGCTGATTATTTTCTGTTACGGTCATTGCAGTCTTTTAGCTTAATCTTTTCCTGCGGATCTGGCGTGATTTCTTAAGCCTTAAACCAAGAGGCAGTGCCCAAGTACTGTCCTGATATTTCACAAATAAAGCTGATGTTAGTAACTAAGCAATGCAGTTATATCATCATCCATACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAAGGCATTGATTACACGTCGTATCATGTTAATCCCATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATCAACCCAAGTGCAAAGCTTCCCGTCTTTCAAAATGGTTCGCACGTCATTTTCGACACGATTGAGATAATTCAGTATGTCTTGCTTCTTAGTCCTTTGTTCTTACCCTTTTAATGTGCAATTTCCATATGCTTTATGAGATTGGCTGGAATAACTCACTTCATTAGATTGACTCAAAAGGTTGTGATTGTATTGACACTCTTGAAGCAAAATGAAGATAAGTGGATGGAAAATAAATTACTTATGAGTAGTTTGTTTCGTAGACTACATTTTTGTTTTTTAAGAACAAAAGTTATGTGAAACATTTGTAGTTGACAGTTATATAGTTTCTTCTAGTGGTCTGTTTTTTTTCAGAACAATTGAAGATATTGTACAATCTTTCACAATTTCTGAAAACCATTTTTCAAATAACTGTAAAACTAGCCACTAAACACCACCTTAGTGATTATCTCTCTTCAATGGCCATTTCTTTTACGGAGTCGAAAACCCAGCTTTATAGCTTTCTGAAGTAAGGTTTTCTAATGTGCGGATGTCACAACTCTGTTCAGGTATATAGAGAGAATTGCAGTTGTCTCCTCAGGGATCGACGACGTAATGCTGAGTAGCAGAGAAGTTGTTGAATGGATGCATAAGATTCAAGAATGGAATCCAAAATTTTTCACTCTTGCCCACATCCCTGAGAAGTACCGCCTTACTGTTACCAGATTTGTAAGGCGGGTGGTGATCGCACGGATGGCTGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTCAGAGAAGCATACGAAACTGAAGACAAATTGAAAAACAAAACTGTTGTCAGACAAAGCACTGAACATCTAGTTAGACTTCTTGATGAAATCGAATCGAAACTAGGCGAAACTTCTTATTTAGCAGGAGAAGAGTTTACAATGGCTGATGCCGTGTTCATTCCGGTGCTGGCTCGAATCGTGCTGTTGAAGCTGGCGGACGAGTATATAGGCAGCAGACCAAACATTGCAGAGTATTGGATCTTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGGAAGTACTTCAATGGATGGAGAAAGCACAAAACACTTCTGAAAACCTGGTGCTTTGTTCATATCAGAACCTTGCTGAGGAGATATTGATGGAAAAATAATTATAAAGTCATAGAAGTTTGTTTATATTTTGTACATGAGGGAGAAGTTATAGGGGTAAAAGGGTAAAGTGTATGTATTTATTGCCATTTTTTTTTACCTCCCTTTTTATTATGTTTCATGATTGTGTGTTGTATGTTTCATTTTTATTTCTTCTTGGACGGAGGATTGGGGGTTGAATCTTGATTTGGATTTCTTGAATGGTATTTAATAAGTCGAATTATACTCCACATTTGAAAAATTAAGTGAAACAAAGAAACTAATTAT CAACCAGAGAACGGCCTTTCCAAAAATTTCTCTCACTTTTGTGCTTCGAAAAGACCCCATCGATTCCTTTCGACCCTTTTTCTGAGCTTTATCCGATTGCAAAGCAGTAACCCAATTGCGAATTTGAAGCTTTCAATGTTCTTCAGCTGGATGGTTTCTGGGTTTCCGGCTTGAGGTCTTTTAGCTTAATCTTTTCCTGCGGATCTGGCGTGATTTCTTAAGCCTTAAACCAAGAGGCAGTGCCCAAGTACTGTCCTGATATTTCACAAATAAAGCTGATGTTAGTAACTAAGCAATGCAGTTATATCATCATCCATACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAAGGCATTGATTACACGTCGTATCATGTTAATCCCATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATCAACCCAAGTGCAAAGCTTCCCGTCTTTCAAAATGGTTCGCACGTCATTTTCGACACGATTGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTCTCCTCAGGGATCGACGACGTAATGCTGAGTAGCAGAGAAGTTGTTGAATGGATGCATAAGATTCAAGAATGGAATCCAAAATTTTTCACTCTTGCCCACATCCCTGAGAAGTACCGCCTTACTGTTACCAGATTTGTAAGGCGGGTGGTGATCGCACGGATGGCTGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTCAGAGAAGCATACGAAACTGAAGACAAATTGAAAAACAAAACTGTTGTCAGACAAAGCACTGAACATCTAGTTAGACTTCTTGATGAAATCGAATCGAAACTAGGCGAAACTTCTTATTTAGCAGGAGAAGAGTTTACAATGGCTGATGCCGTGTTCATTCCGGTGCTGGCTCGAATCGTGCTGTTGAAGCTGGCGGACGAGTATATAGGCAGCAGACCAAACATTGCAGAGTATTGGATCTTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGGAAGTACTTCAATGGATGGAGAAAGCACAAAACACTTCTGAAAACCTGGTGCTTTGTTCATATCAGAACCTTGCTGAGGAGATATTGATGGAAAAATAATTATAAAGTCATAGAAGTTTGTTTATATTTTGTACATGAGGGAGAAGTTATAGGGGTAAAAGGGTAAAGTGTATGTATTTATTGCCATTTTTTTTTACCTCCCTTTTTATTATGTTTCATGATTGTGTGTTGTATGTTTCATTTTTATTTCTTCTTGGACGGAGGATTGGGGGTTGAATCTTGATTTGGATTTCTTGAATGGTATTTAATAAGTCGAATTATACTCCACATTTGAAAAATTAAGTGAAACAAAGAAACTAATTAT ATGCAGTTATATCATCATCCATACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAAGGCATTGATTACACGTCGTATCATGTTAATCCCATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATCAACCCAAGTGCAAAGCTTCCCGTCTTTCAAAATGGTTCGCACGTCATTTTCGACACGATTGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTCTCCTCAGGGATCGACGACGTAATGCTGAGTAGCAGAGAAGTTGTTGAATGGATGCATAAGATTCAAGAATGGAATCCAAAATTTTTCACTCTTGCCCACATCCCTGAGAAGTACCGCCTTACTGTTACCAGATTTGTAAGGCGGGTGGTGATCGCACGGATGGCTGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTCAGAGAAGCATACGAAACTGAAGACAAATTGAAAAACAAAACTGTTGTCAGACAAAGCACTGAACATCTAGTTAGACTTCTTGATGAAATCGAATCGAAACTAGGCGAAACTTCTTATTTAGCAGGAGAAGAGTTTACAATGGCTGATGCCGTGTTCATTCCGGTGCTGGCTCGAATCGTGCTGTTGAAGCTGGCGGACGAGTATATAGGCAGCAGACCAAACATTGCAGAGTATTGGATCTTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGGAAGTACTTCAATGGATGGAGAAAGCACAAAACACTTCTGAAAACCTGGTGCTTTGTTCATATCAGAACCTTGCTGAGGAGATATTGA MQLYHHPYSLDSQKVRLALEEQGIDYTSYHVNPITAKNMDSSFFKINPSAKLPVFQNGSHVIFDTIEIIQYIERIAVVSSGIDDVMLSSREVVEWMHKIQEWNPKFFTLAHIPEKYRLTVTRFVRRVVIARMAETPEMAAAYHRKLREAYETEDKLKNKTVVRQSTEHLVRLLDEIESKLGETSYLAGEEFTMADAVFIPVLARIVLLKLADEYIGSRPNIAEYWILVQQRPSYKKVIGKYFNGWRKHKTLLKTWCFVHIRTLLRRY Homology
BLAST of Lsi04G018390 vs. ExPASy Swiss-Prot
Match: O80662 (Glutathione S-transferase TCHQD OS=Arabidopsis thaliana OX=3702 GN=TCHQD PE=2 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 2.9e-108 Identity = 189/267 (70.79%), Postives = 233/267 (87.27%), Query Frame = 0
BLAST of Lsi04G018390 vs. ExPASy Swiss-Prot
Match: Q03520 (Tetrachloro-P-hydroquinone reductive dehalogenase OS=Sphingobium chlorophenolicum OX=46429 GN=pcpC PE=1 SV=3) HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15 Identity = 61/238 (25.63%), Postives = 116/238 (48.74%), Query Frame = 0
BLAST of Lsi04G018390 vs. ExPASy Swiss-Prot
Match: Q9SRY5 (Glutathione S-transferase F7 OS=Arabidopsis thaliana OX=3702 GN=GSTF7 PE=2 SV=3) HSP 1 Score: 74.3 bits (181), Expect = 2.3e-12 Identity = 61/241 (25.31%), Postives = 109/241 (45.23%), Query Frame = 0
BLAST of Lsi04G018390 vs. ExPASy Swiss-Prot
Match: P42760 (Glutathione S-transferase F6 OS=Arabidopsis thaliana OX=3702 GN=GSTF6 PE=2 SV=2) HSP 1 Score: 73.9 bits (180), Expect = 3.0e-12 Identity = 62/247 (25.10%), Postives = 109/247 (44.13%), Query Frame = 0
BLAST of Lsi04G018390 vs. ExPASy Swiss-Prot
Match: P30110 (Glutathione S-transferase 1 OS=Triticum aestivum OX=4565 GN=GSTA1 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.3e-11 Identity = 61/240 (25.42%), Postives = 111/240 (46.25%), Query Frame = 0
BLAST of Lsi04G018390 vs. ExPASy TrEMBL
Match: A0A1S3BAL6 (glutathione S-transferase TCHQD OS=Cucumis melo OX=3656 GN=LOC103487615 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.6e-139 Identity = 245/267 (91.76%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Lsi04G018390 vs. ExPASy TrEMBL
Match: A0A5A7UCM6 (Glutathione S-transferase TCHQD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00230 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.6e-139 Identity = 245/267 (91.76%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Lsi04G018390 vs. ExPASy TrEMBL
Match: A0A0A0KYI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358760 PE=4 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138 Identity = 247/267 (92.51%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Lsi04G018390 vs. ExPASy TrEMBL
Match: A0A6J1F7L5 (glutathione S-transferase TCHQD-like OS=Cucurbita moschata OX=3662 GN=LOC111443087 PE=4 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 3.7e-138 Identity = 247/267 (92.51%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Lsi04G018390 vs. ExPASy TrEMBL
Match: A0A6J1IYB9 (glutathione S-transferase TCHQD-like OS=Cucurbita maxima OX=3661 GN=LOC111480307 PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 6.5e-135 Identity = 241/270 (89.26%), Postives = 260/270 (96.30%), Query Frame = 0
BLAST of Lsi04G018390 vs. NCBI nr
Match: XP_038896781.1 (glutathione S-transferase TCHQD [Benincasa hispida] >XP_038896782.1 glutathione S-transferase TCHQD [Benincasa hispida] >XP_038896783.1 glutathione S-transferase TCHQD [Benincasa hispida] >XP_038896784.1 glutathione S-transferase TCHQD [Benincasa hispida] >XP_038896785.1 glutathione S-transferase TCHQD [Benincasa hispida]) HSP 1 Score: 513.1 bits (1320), Expect = 1.5e-141 Identity = 258/267 (96.63%), Postives = 262/267 (98.13%), Query Frame = 0
BLAST of Lsi04G018390 vs. NCBI nr
Match: XP_008444209.1 (PREDICTED: glutathione S-transferase TCHQD [Cucumis melo] >XP_008444210.1 PREDICTED: glutathione S-transferase TCHQD [Cucumis melo] >XP_008444211.1 PREDICTED: glutathione S-transferase TCHQD [Cucumis melo] >KAA0052227.1 glutathione S-transferase TCHQD [Cucumis melo var. makuwa] >TYK01791.1 glutathione S-transferase TCHQD [Cucumis melo var. makuwa]) HSP 1 Score: 502.7 bits (1293), Expect = 2.0e-138 Identity = 245/267 (91.76%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Lsi04G018390 vs. NCBI nr
Match: XP_004142639.1 (glutathione S-transferase TCHQD [Cucumis sativus] >XP_004142640.1 glutathione S-transferase TCHQD [Cucumis sativus] >XP_011653774.1 glutathione S-transferase TCHQD [Cucumis sativus] >XP_031740304.1 glutathione S-transferase TCHQD [Cucumis sativus] >XP_031740306.1 glutathione S-transferase TCHQD [Cucumis sativus] >XP_031740307.1 glutathione S-transferase TCHQD [Cucumis sativus] >KGN54538.1 hypothetical protein Csa_012345 [Cucumis sativus]) HSP 1 Score: 501.5 bits (1290), Expect = 4.4e-138 Identity = 247/267 (92.51%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Lsi04G018390 vs. NCBI nr
Match: XP_022936480.1 (glutathione S-transferase TCHQD-like [Cucurbita moschata] >XP_022936481.1 glutathione S-transferase TCHQD-like [Cucurbita moschata] >XP_022936482.1 glutathione S-transferase TCHQD-like [Cucurbita moschata] >XP_022936483.1 glutathione S-transferase TCHQD-like [Cucurbita moschata] >XP_022936484.1 glutathione S-transferase TCHQD-like [Cucurbita moschata] >XP_022936485.1 glutathione S-transferase TCHQD-like [Cucurbita moschata] >XP_022936486.1 glutathione S-transferase TCHQD-like [Cucurbita moschata] >XP_022936487.1 glutathione S-transferase TCHQD-like [Cucurbita moschata]) HSP 1 Score: 500.7 bits (1288), Expect = 7.6e-138 Identity = 247/267 (92.51%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Lsi04G018390 vs. NCBI nr
Match: XP_023534867.1 (glutathione S-transferase TCHQD [Cucurbita pepo subsp. pepo] >XP_023534868.1 glutathione S-transferase TCHQD [Cucurbita pepo subsp. pepo] >XP_023534870.1 glutathione S-transferase TCHQD [Cucurbita pepo subsp. pepo] >XP_023534871.1 glutathione S-transferase TCHQD [Cucurbita pepo subsp. pepo]) HSP 1 Score: 499.2 bits (1284), Expect = 2.2e-137 Identity = 246/267 (92.13%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Lsi04G018390 vs. TAIR 10
Match: AT1G77290.1 (Glutathione S-transferase family protein ) HSP 1 Score: 392.9 bits (1008), Expect = 2.1e-109 Identity = 189/267 (70.79%), Postives = 233/267 (87.27%), Query Frame = 0
BLAST of Lsi04G018390 vs. TAIR 10
Match: AT1G77290.2 (Glutathione S-transferase family protein ) HSP 1 Score: 392.9 bits (1008), Expect = 2.1e-109 Identity = 189/267 (70.79%), Postives = 233/267 (87.27%), Query Frame = 0
BLAST of Lsi04G018390 vs. TAIR 10
Match: AT1G02920.1 (glutathione S-transferase 7 ) HSP 1 Score: 74.3 bits (181), Expect = 1.6e-13 Identity = 61/241 (25.31%), Postives = 109/241 (45.23%), Query Frame = 0
BLAST of Lsi04G018390 vs. TAIR 10
Match: AT1G02930.1 (glutathione S-transferase 6 ) HSP 1 Score: 73.9 bits (180), Expect = 2.1e-13 Identity = 62/247 (25.10%), Postives = 109/247 (44.13%), Query Frame = 0
BLAST of Lsi04G018390 vs. TAIR 10
Match: AT1G02930.2 (glutathione S-transferase 6 ) HSP 1 Score: 73.9 bits (180), Expect = 2.1e-13 Identity = 62/247 (25.10%), Postives = 109/247 (44.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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