Lsi04G012130 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G012130
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
Locationchr04: 18691926 .. 18692417 (+)
RNA-Seq ExpressionLsi04G012130
SyntenyLsi04G012130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTTGACTTTGTCTGGAGTGTTAAACGTCATAGATGGGCTATGGTCAAATTGTGGAGATGCAAGAATAATAGTTTTCACAACAAACCATAAGGAAAAATTGGATCCTGCATTGTTAAGACCAGGGCGTATGGATATGCACGTGCACATGACATATCTGACTCCTTCCGGATTTGAAATTCTAGCCTCTAACTATTTGCAAATCAATCACCATCAACGTTTCAAAGAAATTAAAGACCTTATCATGGAGGTGGAGGTCACACCTGCAGAAATTGCAGAGGAGCTCATGAAAAGTGACGATGCTGATGTGGCACTTGAATCTGTCGTTGAATTCATCAACGGGAAGAAAAGGATGAAGATGGAGAAAGAGTGTAATTCTGAAGTGATCGAAAAGGTTGATTGTCAGAGACCCCAAGACAATGAAAAAGAAGATCATTTAAAGGAGAAAAAGAGAAGTAAAAGAAGACGAAACAGATGGAGTCGACCATGA

mRNA sequence

ATGCAGTTGACTTTGTCTGGAGTGTTAAACGTCATAGATGGGCTATGGTCAAATTGTGGAGATGCAAGAATAATAGTTTTCACAACAAACCATAAGGAAAAATTGGATCCTGCATTGTTAAGACCAGGGCGTATGGATATGCACGTGCACATGACATATCTGACTCCTTCCGGATTTGAAATTCTAGCCTCTAACTATTTGCAAATCAATCACCATCAACGTTTCAAAGAAATTAAAGACCTTATCATGGAGGTGGAGGTCACACCTGCAGAAATTGCAGAGGAGCTCATGAAAAGTGACGATGCTGATGTGGCACTTGAATCTGTCGTTGAATTCATCAACGGGAAGAAAAGGATGAAGATGGAGAAAGAGTGTAATTCTGAAGTGATCGAAAAGGTTGATTGTCAGAGACCCCAAGACAATGAAAAAGAAGATCATTTAAAGGAGAAAAAGAGAAGTAAAAGAAGACGAAACAGATGGAGTCGACCATGA

Coding sequence (CDS)

ATGCAGTTGACTTTGTCTGGAGTGTTAAACGTCATAGATGGGCTATGGTCAAATTGTGGAGATGCAAGAATAATAGTTTTCACAACAAACCATAAGGAAAAATTGGATCCTGCATTGTTAAGACCAGGGCGTATGGATATGCACGTGCACATGACATATCTGACTCCTTCCGGATTTGAAATTCTAGCCTCTAACTATTTGCAAATCAATCACCATCAACGTTTCAAAGAAATTAAAGACCTTATCATGGAGGTGGAGGTCACACCTGCAGAAATTGCAGAGGAGCTCATGAAAAGTGACGATGCTGATGTGGCACTTGAATCTGTCGTTGAATTCATCAACGGGAAGAAAAGGATGAAGATGGAGAAAGAGTGTAATTCTGAAGTGATCGAAAAGGTTGATTGTCAGAGACCCCAAGACAATGAAAAAGAAGATCATTTAAAGGAGAAAAAGAGAAGTAAAAGAAGACGAAACAGATGGAGTCGACCATGA

Protein sequence

MQLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEILASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKMEKECNSEVIEKVDCQRPQDNEKEDHLKEKKRSKRRRNRWSRP
Homology
BLAST of Lsi04G012130 vs. ExPASy Swiss-Prot
Match: Q147F9 (AAA-ATPase At3g50940 OS=Arabidopsis thaliana OX=3702 GN=At3g50940 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.1e-41
Identity = 75/121 (61.98%), Postives = 101/121 (83.47%), Query Frame = 0

Query: 3   LTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEIL 62
           +TLSG+LN +DGLWS+CG+ RIIVFTTN++EKLDPALLRPGRMDMH+HM+Y TP+ F++L
Sbjct: 330 VTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHIHMSYCTPAAFKVL 389

Query: 63  ASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKME 122
           ASNYL+I  H  F++I++ I E+EVTPAE+AE+LM+SD  D  L+ +VEF+  KK++   
Sbjct: 390 ASNYLEIQDHILFEQIEEFIREIEVTPAEVAEQLMRSDSVDKVLQGLVEFLKAKKQIDNS 449

Query: 123 K 124
           K
Sbjct: 450 K 450

BLAST of Lsi04G012130 vs. ExPASy Swiss-Prot
Match: Q8VZG2 (Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=HSR4 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-36
Identity = 80/151 (52.98%), Postives = 110/151 (72.85%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           ++TLSG+LN IDGLWS+CGD RII+FTTN+KEKLD ALLRPGRMDMH+HM+Y TPS F+ 
Sbjct: 387 KVTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKA 446

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKM 121
           LA NYL+I  H+ F +I++ I   EVTPAE+AE+LM++D  D  LE ++EF+  K   K+
Sbjct: 447 LALNYLEIKEHRLFSKIEEGIEATEVTPAEVAEQLMRNDSVDKVLEGLIEFLKVK---KI 506

Query: 122 EKECNSEVIEKVDCQ-RPQDNEKEDHLKEKK 152
           E E +    EK + + + +  E  D + +K+
Sbjct: 507 ENEQDKAKTEKQELENKKKTKEGTDSVVKKE 534

BLAST of Lsi04G012130 vs. ExPASy Swiss-Prot
Match: F4IQG2 (AAA-ATPase At2g18190 OS=Arabidopsis thaliana OX=3702 GN=At2g18190 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.6e-35
Identity = 82/157 (52.23%), Postives = 105/157 (66.88%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           ++TLSG+LN +DGLWS+ GD RIIVFTTNHKE+LDPALLRPGRMDMH++M+Y T  GF  
Sbjct: 329 RVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSYCTGLGFRT 388

Query: 62  LASNYLQIN--HHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFI-NGKKR 121
           L SNYL +   +H   +EI+ LI   EVTPAE+AEELM+ DD DV L  VV F+ N K  
Sbjct: 389 LVSNYLGLGGLNHPLCEEIEALIDSTEVTPAELAEELMQEDDTDVVLRGVVSFVENRKVE 448

Query: 122 MKMEKECNSEVIEKVDCQRPQDNEKEDHLKEKKRSKR 156
           +   KE       K+D     +    + LK+ K+ K+
Sbjct: 449 ISKTKELEGSTCRKLDGDDKHNVSSTNDLKKTKKKKK 485

BLAST of Lsi04G012130 vs. ExPASy Swiss-Prot
Match: Q8GW96 (AAA-ATPase At2g18193 OS=Arabidopsis thaliana OX=3702 GN=At2g18193 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.5e-34
Identity = 82/166 (49.40%), Postives = 115/166 (69.28%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           ++TLSG+LN IDGLWS+ GD RIIVFTTNHKE+LDPALLRPGRMD+H++M+Y T  GF  
Sbjct: 325 KVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSYCTGLGFRT 384

Query: 62  LASNYLQIN--HHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKK-- 121
           L SNYL ++  +H   +EI+ L+   EVTPAE+AEELM+ DD DV L  V+ F+  +K  
Sbjct: 385 LVSNYLGLDGLNHPLCEEIEALVDSTEVTPAELAEELMQDDDTDVVLRGVISFVEKRKVE 444

Query: 122 RMKMEKECNSEVIEKVDCQRPQDNEKEDH----LKEKKRSKRRRNR 160
           R K +KE +        C+   D+EK++     +K+KK+  +++ +
Sbjct: 445 RSKTKKEVSI-------CKATDDDEKQNGSLGCVKKKKKGGKQKGK 483

BLAST of Lsi04G012130 vs. ExPASy Swiss-Prot
Match: Q9FN78 (AAA-ATPase At5g17730 OS=Arabidopsis thaliana OX=3702 GN=At5g17730 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.5e-34
Identity = 72/124 (58.06%), Postives = 96/124 (77.42%), Query Frame = 0

Query: 3   LTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEIL 62
           LTLSG+L  IDGLWS+CGD RI++FTT HKE+LDPALLRPGRMDMH+HM +     F+ L
Sbjct: 329 LTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHMGHCCFDVFKTL 388

Query: 63  ASNYLQINH---HQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRM 122
           ASNYL ++H   H  + EI+ LI    +TPA++AEELMK++D DVALE +V+ +  +KR+
Sbjct: 389 ASNYLGLSHDDPHHLYPEIERLIKGEVLTPAQVAEELMKNEDPDVALEGLVKVLK-RKRL 448

Query: 123 KMEK 124
           ++EK
Sbjct: 449 ELEK 451

BLAST of Lsi04G012130 vs. ExPASy TrEMBL
Match: A0A6J1DET2 (AAA-ATPase At3g50940-like OS=Momordica charantia OX=3673 GN=LOC111019781 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.7e-59
Identity = 129/162 (79.63%), Postives = 144/162 (88.89%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           +LTLSGVLN IDGLWS+CGDARIIVFTTNH+EKLDPALLRPGRMDMH+HMTYLTPSGF+I
Sbjct: 327 KLTLSGVLNAIDGLWSSCGDARIIVFTTNHREKLDPALLRPGRMDMHIHMTYLTPSGFQI 386

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKM 121
           LASNYLQI +H RF+EI++LIMEVEVTPAEIAEELMKSDDADVAL +VVEFINGKKR KM
Sbjct: 387 LASNYLQIKNHDRFREIEELIMEVEVTPAEIAEELMKSDDADVALGAVVEFINGKKRKKM 446

Query: 122 EKE-CNSEVIEKVDCQRPQDNEKEDHLKEKKRSKRRRNRWSR 163
           EKE CNSE+I K D Q  ++ E+ED    KKR+KRRR RW R
Sbjct: 447 EKELCNSELI-KNDEQSLRNIEEEDQ-NVKKRNKRRRTRWGR 486

BLAST of Lsi04G012130 vs. ExPASy TrEMBL
Match: A0A0A0KTD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590040 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.6e-54
Identity = 119/140 (85.00%), Postives = 127/140 (90.71%), Query Frame = 0

Query: 20  GDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEILASNYLQINHHQRFKEIK 79
           GDARIIVFTTNHKEKLDPALLRPGRMDMHVH+TYLTPSGFE LASNYLQINHH+RFKEI+
Sbjct: 5   GDARIIVFTTNHKEKLDPALLRPGRMDMHVHLTYLTPSGFETLASNYLQINHHRRFKEIQ 64

Query: 80  DLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKMEKECNSEVIEKVDCQRPQ 139
           DLIMEVEVTPAE AEELMKS+DADV LESV EFIN KKR KMEKECNSEVI KVD +  Q
Sbjct: 65  DLIMEVEVTPAENAEELMKSEDADVVLESVTEFINNKKRKKMEKECNSEVIAKVDGKSIQ 124

Query: 140 DNEKEDHLKEKKRSKRRRNR 160
           D E+ED LKE+K +KRRRNR
Sbjct: 125 DIEEED-LKERKVNKRRRNR 143

BLAST of Lsi04G012130 vs. ExPASy TrEMBL
Match: A0A6J1DCI1 (AAA-ATPase At3g50940-like OS=Momordica charantia OX=3673 GN=LOC111019763 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53
Identity = 119/163 (73.01%), Postives = 133/163 (81.60%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           +LTLSGVLN IDGLWS+CGDARIIVFTTNHKEKLDPALLRPGRMDMH+HMTYLTPSGF+I
Sbjct: 321 KLTLSGVLNAIDGLWSSCGDARIIVFTTNHKEKLDPALLRPGRMDMHIHMTYLTPSGFQI 380

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKM 121
           LASNYLQI  H RFKEI++LIMEVEVTPAEIAEELMKSDDADVAL +VVEFINGKKR ++
Sbjct: 381 LASNYLQIKSHDRFKEIEELIMEVEVTPAEIAEELMKSDDADVALGAVVEFINGKKRKRV 440

Query: 122 EKECNSEVIEKVDCQRPQDNEKEDHLKEKKRSKRRRN--RWSR 163
           EK       ++ D Q   + E     K+KK + RRR   RW R
Sbjct: 441 EK-------DERDPQEDIEEEDPKEFKQKKGNTRRRRHMRWRR 476

BLAST of Lsi04G012130 vs. ExPASy TrEMBL
Match: A0A1R3GQW2 (AAA domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_24142 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.6e-43
Identity = 86/116 (74.14%), Postives = 100/116 (86.21%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           QLTLSG+LN IDGLWS+CGD RIIVFTTNHK+KLDPALLRPGRMDMH+HM+Y TPSGF +
Sbjct: 328 QLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDKLDPALLRPGRMDMHIHMSYCTPSGFRV 387

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKK 118
           LASNYL I  H  F EI  L+MEVE TPAEIAEELM+S+DAD+ALE +++F+  KK
Sbjct: 388 LASNYLDITSHDLFHEIDQLLMEVEATPAEIAEELMRSEDADIALEGLIKFLQNKK 443

BLAST of Lsi04G012130 vs. ExPASy TrEMBL
Match: A0A061E928 (ATP binding protein, putative OS=Theobroma cacao OX=3641 GN=TCM_010794 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.5e-43
Identity = 86/116 (74.14%), Postives = 102/116 (87.93%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           QLTLSG+LN IDGLWS+CGD RIIVFTTNHK+KLDPALLRPGRMDMH+HM+Y TPSGF I
Sbjct: 328 QLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDKLDPALLRPGRMDMHIHMSYCTPSGFRI 387

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKK 118
           LASNYL I  H+ F +I +L+MEVEVTPAE+AE LMKS+DAD+ALE +++F+  KK
Sbjct: 388 LASNYLGITSHKLFTQIDELMMEVEVTPAEVAEGLMKSEDADIALEGLIKFLQNKK 443

BLAST of Lsi04G012130 vs. NCBI nr
Match: XP_038892960.1 (AAA-ATPase At3g50940-like [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 9.2e-70
Identity = 144/161 (89.44%), Postives = 151/161 (93.79%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           QLTLSGVLNVIDGLWS+CGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI
Sbjct: 332 QLTLSGVLNVIDGLWSSCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 391

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKM 121
           LASNYLQINHHQRFKEI+DLIMEVEVTPAEIAEELMKSDDADVALESVVEF+NGKK+ KM
Sbjct: 392 LASNYLQINHHQRFKEIQDLIMEVEVTPAEIAEELMKSDDADVALESVVEFVNGKKKKKM 451

Query: 122 EKECNSEVIEKVDCQRPQDNEKEDHLKEKKRSKRRRNRWSR 163
           EKECNS+ IE VD Q  +D EKE  LK KKR+KRRRNRWSR
Sbjct: 452 EKECNSDPIENVDGQISRDIEKEG-LKLKKRNKRRRNRWSR 491

BLAST of Lsi04G012130 vs. NCBI nr
Match: XP_022151927.1 (AAA-ATPase At3g50940-like [Momordica charantia])

HSP 1 Score: 238.0 bits (606), Expect = 5.6e-59
Identity = 129/162 (79.63%), Postives = 144/162 (88.89%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           +LTLSGVLN IDGLWS+CGDARIIVFTTNH+EKLDPALLRPGRMDMH+HMTYLTPSGF+I
Sbjct: 327 KLTLSGVLNAIDGLWSSCGDARIIVFTTNHREKLDPALLRPGRMDMHIHMTYLTPSGFQI 386

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKM 121
           LASNYLQI +H RF+EI++LIMEVEVTPAEIAEELMKSDDADVAL +VVEFINGKKR KM
Sbjct: 387 LASNYLQIKNHDRFREIEELIMEVEVTPAEIAEELMKSDDADVALGAVVEFINGKKRKKM 446

Query: 122 EKE-CNSEVIEKVDCQRPQDNEKEDHLKEKKRSKRRRNRWSR 163
           EKE CNSE+I K D Q  ++ E+ED    KKR+KRRR RW R
Sbjct: 447 EKELCNSELI-KNDEQSLRNIEEEDQ-NVKKRNKRRRTRWGR 486

BLAST of Lsi04G012130 vs. NCBI nr
Match: KAE8648682.1 (hypothetical protein Csa_009202 [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 6.4e-55
Identity = 122/147 (82.99%), Postives = 130/147 (88.44%), Query Frame = 0

Query: 13  DGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEILASNYLQINHH 72
           DG  S  GDARIIVFTTNHKEKLDPALLRPGRMDMHVH+TYLTPSGFE LASNYLQINHH
Sbjct: 252 DGGDSQLGDARIIVFTTNHKEKLDPALLRPGRMDMHVHLTYLTPSGFETLASNYLQINHH 311

Query: 73  QRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKMEKECNSEVIEK 132
           +RFKEI+DLIMEVEVTPAE AEELMKS+DADV LESV EFIN KKR KMEKECNSEVI K
Sbjct: 312 RRFKEIQDLIMEVEVTPAENAEELMKSEDADVVLESVTEFINNKKRKKMEKECNSEVIAK 371

Query: 133 VDCQRPQDNEKEDHLKEKKRSKRRRNR 160
           VD +  QD E+ED LKE+K +KRRRNR
Sbjct: 372 VDGKSIQDIEEED-LKERKVNKRRRNR 397

BLAST of Lsi04G012130 vs. NCBI nr
Match: XP_022151910.1 (AAA-ATPase At3g50940-like [Momordica charantia])

HSP 1 Score: 219.2 bits (557), Expect = 2.7e-53
Identity = 119/163 (73.01%), Postives = 133/163 (81.60%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           +LTLSGVLN IDGLWS+CGDARIIVFTTNHKEKLDPALLRPGRMDMH+HMTYLTPSGF+I
Sbjct: 321 KLTLSGVLNAIDGLWSSCGDARIIVFTTNHKEKLDPALLRPGRMDMHIHMTYLTPSGFQI 380

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKM 121
           LASNYLQI  H RFKEI++LIMEVEVTPAEIAEELMKSDDADVAL +VVEFINGKKR ++
Sbjct: 381 LASNYLQIKSHDRFKEIEELIMEVEVTPAEIAEELMKSDDADVALGAVVEFINGKKRKRV 440

Query: 122 EKECNSEVIEKVDCQRPQDNEKEDHLKEKKRSKRRRN--RWSR 163
           EK       ++ D Q   + E     K+KK + RRR   RW R
Sbjct: 441 EK-------DERDPQEDIEEEDPKEFKQKKGNTRRRRHMRWRR 476

BLAST of Lsi04G012130 vs. NCBI nr
Match: KAF3967528.1 (hypothetical protein CMV_008468 [Castanea mollissima])

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 103/158 (65.19%), Postives = 124/158 (78.48%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           QLTLSG+LN IDGLW++CGD RIIVFTTNHK++LDPALLRPGRMDMH+HM+Y TPSGF+I
Sbjct: 324 QLTLSGLLNFIDGLWTSCGDERIIVFTTNHKDRLDPALLRPGRMDMHIHMSYCTPSGFKI 383

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKM 121
           LASNYL+I  H  F EI+ LI EVEVTPAE+AEELMKS+D D+AL  +V F+  KK+MK 
Sbjct: 384 LASNYLRIESHCLFTEIEGLIKEVEVTPAEVAEELMKSEDPDIALAGLVAFLQQKKQMKC 443

Query: 122 EKECNSEVIEKVDCQRPQDNEKEDHLKEKKRSKRRRNR 160
            +E  SEV EKV+ Q  Q   K+  +KE KR K R  +
Sbjct: 444 SEESKSEV-EKVNEQSKQSPRKK-KVKESKRKKARSGK 479

BLAST of Lsi04G012130 vs. TAIR 10
Match: AT3G50940.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 5.1e-42
Identity = 75/121 (61.98%), Postives = 101/121 (83.47%), Query Frame = 0

Query: 3   LTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEIL 62
           +TLSG+LN +DGLWS+CG+ RIIVFTTN++EKLDPALLRPGRMDMH+HM+Y TP+ F++L
Sbjct: 330 VTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHIHMSYCTPAAFKVL 389

Query: 63  ASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKME 122
           ASNYL+I  H  F++I++ I E+EVTPAE+AE+LM+SD  D  L+ +VEF+  KK++   
Sbjct: 390 ASNYLEIQDHILFEQIEEFIREIEVTPAEVAEQLMRSDSVDKVLQGLVEFLKAKKQIDNS 449

Query: 123 K 124
           K
Sbjct: 450 K 450

BLAST of Lsi04G012130 vs. TAIR 10
Match: AT3G50930.1 (cytochrome BC1 synthesis )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 80/151 (52.98%), Postives = 110/151 (72.85%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           ++TLSG+LN IDGLWS+CGD RII+FTTN+KEKLD ALLRPGRMDMH+HM+Y TPS F+ 
Sbjct: 387 KVTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKA 446

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMKM 121
           LA NYL+I  H+ F +I++ I   EVTPAE+AE+LM++D  D  LE ++EF+  K   K+
Sbjct: 447 LALNYLEIKEHRLFSKIEEGIEATEVTPAEVAEQLMRNDSVDKVLEGLIEFLKVK---KI 506

Query: 122 EKECNSEVIEKVDCQ-RPQDNEKEDHLKEKK 152
           E E +    EK + + + +  E  D + +K+
Sbjct: 507 ENEQDKAKTEKQELENKKKTKEGTDSVVKKE 534

BLAST of Lsi04G012130 vs. TAIR 10
Match: AT2G18190.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 5.4e-36
Identity = 82/157 (52.23%), Postives = 105/157 (66.88%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           ++TLSG+LN +DGLWS+ GD RIIVFTTNHKE+LDPALLRPGRMDMH++M+Y T  GF  
Sbjct: 329 RVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSYCTGLGFRT 388

Query: 62  LASNYLQIN--HHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFI-NGKKR 121
           L SNYL +   +H   +EI+ LI   EVTPAE+AEELM+ DD DV L  VV F+ N K  
Sbjct: 389 LVSNYLGLGGLNHPLCEEIEALIDSTEVTPAELAEELMQEDDTDVVLRGVVSFVENRKVE 448

Query: 122 MKMEKECNSEVIEKVDCQRPQDNEKEDHLKEKKRSKR 156
           +   KE       K+D     +    + LK+ K+ K+
Sbjct: 449 ISKTKELEGSTCRKLDGDDKHNVSSTNDLKKTKKKKK 485

BLAST of Lsi04G012130 vs. TAIR 10
Match: AT4G05380.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 7.1e-36
Identity = 70/119 (58.82%), Postives = 91/119 (76.47%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           ++TLSG+LN +DGLWS+C + RII+FTTNHKEKLDPALLRPGRMD+H+ M Y TP  F+ 
Sbjct: 123 KVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTPIVFKK 182

Query: 62  LASNYLQINHHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKKRMK 121
           LA+ YL+I  H+ F  I+ + +EV+ TPAEI E+LM S D DV L+ +VEF+  KK  K
Sbjct: 183 LAALYLEIEEHELFDPIEKMFLEVKATPAEITEKLMVSKDPDVTLKGLVEFLESKKMTK 241

BLAST of Lsi04G012130 vs. TAIR 10
Match: AT2G18193.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 145.2 bits (365), Expect = 4.6e-35
Identity = 82/166 (49.40%), Postives = 115/166 (69.28%), Query Frame = 0

Query: 2   QLTLSGVLNVIDGLWSNCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEI 61
           ++TLSG+LN IDGLWS+ GD RIIVFTTNHKE+LDPALLRPGRMD+H++M+Y T  GF  
Sbjct: 325 KVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSYCTGLGFRT 384

Query: 62  LASNYLQIN--HHQRFKEIKDLIMEVEVTPAEIAEELMKSDDADVALESVVEFINGKK-- 121
           L SNYL ++  +H   +EI+ L+   EVTPAE+AEELM+ DD DV L  V+ F+  +K  
Sbjct: 385 LVSNYLGLDGLNHPLCEEIEALVDSTEVTPAELAEELMQDDDTDVVLRGVISFVEKRKVE 444

Query: 122 RMKMEKECNSEVIEKVDCQRPQDNEKEDH----LKEKKRSKRRRNR 160
           R K +KE +        C+   D+EK++     +K+KK+  +++ +
Sbjct: 445 RSKTKKEVSI-------CKATDDDEKQNGSLGCVKKKKKGGKQKGK 483

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q147F97.1e-4161.98AAA-ATPase At3g50940 OS=Arabidopsis thaliana OX=3702 GN=At3g50940 PE=2 SV=1[more]
Q8VZG21.8e-3652.98Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=HSR4 PE=2... [more]
F4IQG27.6e-3552.23AAA-ATPase At2g18190 OS=Arabidopsis thaliana OX=3702 GN=At2g18190 PE=2 SV=1[more]
Q8GW966.5e-3449.40AAA-ATPase At2g18193 OS=Arabidopsis thaliana OX=3702 GN=At2g18193 PE=2 SV=1[more]
Q9FN786.5e-3458.06AAA-ATPase At5g17730 OS=Arabidopsis thaliana OX=3702 GN=At5g17730 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1DET22.7e-5979.63AAA-ATPase At3g50940-like OS=Momordica charantia OX=3673 GN=LOC111019781 PE=3 SV... [more]
A0A0A0KTD82.6e-5485.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590040 PE=4 SV=1[more]
A0A6J1DCI11.3e-5373.01AAA-ATPase At3g50940-like OS=Momordica charantia OX=3673 GN=LOC111019763 PE=3 SV... [more]
A0A1R3GQW21.6e-4374.14AAA domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_24142... [more]
A0A061E9283.5e-4374.14ATP binding protein, putative OS=Theobroma cacao OX=3641 GN=TCM_010794 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_038892960.19.2e-7089.44AAA-ATPase At3g50940-like [Benincasa hispida][more]
XP_022151927.15.6e-5979.63AAA-ATPase At3g50940-like [Momordica charantia][more]
KAE8648682.16.4e-5582.99hypothetical protein Csa_009202 [Cucumis sativus][more]
XP_022151910.12.7e-5373.01AAA-ATPase At3g50940-like [Momordica charantia][more]
KAF3967528.11.7e-4465.19hypothetical protein CMV_008468 [Castanea mollissima][more]
Match NameE-valueIdentityDescription
AT3G50940.15.1e-4261.98P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT3G50930.11.3e-3752.98cytochrome BC1 synthesis [more]
AT2G18190.15.4e-3652.23P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT4G05380.17.1e-3658.82P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT2G18193.14.6e-3549.40P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.280.40coord: 50..121
e-value: 2.2E-19
score: 71.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..163
NoneNo IPR availablePANTHERPTHR23070BCS1 AAA-TYPE ATPASEcoord: 3..136
NoneNo IPR availablePANTHERPTHR23070:SF154SUBFAMILY NOT NAMEDcoord: 3..136
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..49
e-value: 1.0E-13
score: 53.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..103
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 23..41

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G012130.1Lsi04G012130.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity