Lsi04G011110 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G011110
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Endoplasmic reticulum transmembrane protein
Location	chr04: 14178785 .. 14179177 (+)
RNA-Seq Expression	Lsi04G011110
Synteny	Lsi04G011110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGGAATGGGTCGTTCTTGGCTACGCTGCCGCCGCCGAGGCAATCATGGTTCTCCTCTTGACCCTCCCAGGCCTCGATGGCCTCCGCAAAGGTCTAGTCGCCGTCACTCGCAACCTTCTCAAGCCATTCCTCTCCGTCGTCCCCTTTTGCCTCTTCTTGCTCATGGACATCTATTGGAAATATGAGACTCGACCCACTTGCGAATCGGACTCCTGTACCCCTTCTGAGTACCTTCGCCACCAGAAATCGATCATGAAGAGCCAACGCAACGCGCTCTTGATCGCTGCAGCGCTTGTGTTTTACTGGCTGTTGTACTCTGTCACCCATTTGGTTGTTAAGGTTGAGCAATTGAACCAGCGTGTCGAGAGGTTGAAGAATCGGGATTGA

mRNA sequence

ATGGCGTTGGAATGGGTCGTTCTTGGCTACGCTGCCGCCGCCGAGGCAATCATGGTTCTCCTCTTGACCCTCCCAGGCCTCGATGGCCTCCGCAAAGGTCTAGTCGCCGTCACTCGCAACCTTCTCAAGCCATTCCTCTCCGTCGTCCCCTTTTGCCTCTTCTTGCTCATGGACATCTATTGGAAATATGAGACTCGACCCACTTGCGAATCGGACTCCTGTACCCCTTCTGAGTACCTTCGCCACCAGAAATCGATCATGAAGAGCCAACGCAACGCGCTCTTGATCGCTGCAGCGCTTGTGTTTTACTGGCTGTTGTACTCTGTCACCCATTTGGTTGTTAAGGTTGAGCAATTGAACCAGCGTGTCGAGAGGTTGAAGAATCGGGATTGA

Coding sequence (CDS)

ATGGCGTTGGAATGGGTCGTTCTTGGCTACGCTGCCGCCGCCGAGGCAATCATGGTTCTCCTCTTGACCCTCCCAGGCCTCGATGGCCTCCGCAAAGGTCTAGTCGCCGTCACTCGCAACCTTCTCAAGCCATTCCTCTCCGTCGTCCCCTTTTGCCTCTTCTTGCTCATGGACATCTATTGGAAATATGAGACTCGACCCACTTGCGAATCGGACTCCTGTACCCCTTCTGAGTACCTTCGCCACCAGAAATCGATCATGAAGAGCCAACGCAACGCGCTCTTGATCGCTGCAGCGCTTGTGTTTTACTGGCTGTTGTACTCTGTCACCCATTTGGTTGTTAAGGTTGAGCAATTGAACCAGCGTGTCGAGAGGTTGAAGAATCGGGATTGA

Protein sequence

MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLNQRVERLKNRD

Homology

[Close]

BLAST of Lsi04G011110 vs. ExPASy TrEMBL
Match: A0A6J1IKB0 (Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC111474653 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGL+AVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Lsi04G011110 vs. ExPASy TrEMBL
Match: A0A6J1FTP8 (Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC111447211 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGL+AVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Lsi04G011110 vs. ExPASy TrEMBL
Match: A0A0A0KTU7 (Endoplasmic reticulum transmembrane protein OS=Cucumis sativus OX=3659 GN=Csa_5G628640 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFC+FLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCIFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Lsi04G011110 vs. ExPASy TrEMBL
Match: A0A5A7TDF8 (Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00440 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.9e-63
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGL+AVTRNLLKPFLSVVPFC+FLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLIAVTRNLLKPFLSVVPFCIFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Lsi04G011110 vs. ExPASy TrEMBL
Match: A0A6J1DM88 (Endoplasmic reticulum transmembrane protein OS=Momordica charantia OX=3673 GN=LOC111021338 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMVLLLT+PGLDGLRKGL+AVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRP+CESDSCTPSE+LRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN
Sbjct: 61  WKYETRPSCESDSCTPSEFLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Lsi04G011110 vs. NCBI nr
Match: XP_022942023.1 (uncharacterized protein LOC111447211 [Cucurbita moschata] >XP_022975389.1 uncharacterized protein LOC111474653 [Cucurbita maxima] >XP_023548406.1 uncharacterized protein LOC111807049 [Cucurbita pepo subsp. pepo] >XP_038891765.1 uncharacterized protein LOC120081154 [Benincasa hispida] >KAG6600838.1 hypothetical protein SDJN03_06071, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031473.1 hypothetical protein SDJN02_05513, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 252.3 bits (643), Expect = 2.3e-63
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGL+AVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Lsi04G011110 vs. NCBI nr
Match: XP_004142369.2 (uncharacterized protein LOC101213354 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 3.0e-63
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFC+FLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCIFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Lsi04G011110 vs. NCBI nr
Match: KAA0040998.1 (Integral to membrane, endoplasmic reticulum [Cucumis melo var. makuwa] >TYK20348.1 Integral to membrane, endoplasmic reticulum [Cucumis melo var. makuwa])

HSP 1 Score: 251.5 bits (641), Expect = 3.9e-63
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGL+AVTRNLLKPFLSVVPFC+FLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLIAVTRNLLKPFLSVVPFCIFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Lsi04G011110 vs. NCBI nr
Match: XP_022153951.1 (uncharacterized protein LOC111021338 [Momordica charantia])

HSP 1 Score: 248.4 bits (633), Expect = 3.3e-62
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMVLLLT+PGLDGLRKGL+AVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRP+CESDSCTPSE+LRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN
Sbjct: 61  WKYETRPSCESDSCTPSEFLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Lsi04G011110 vs. NCBI nr
Match: XP_028952518.1 (uncharacterized protein LOC114822347 [Malus domestica] >RXH70334.1 hypothetical protein DVH24_007590 [Malus domestica])

HSP 1 Score: 244.2 bits (622), Expect = 6.2e-61
Identity = 122/130 (93.85%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMVLLLT+PGLDGLRKGLV VTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTIPGLDGLRKGLVTVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRP+CE DSCTPSEYLRHQKSIMKSQRNALLIAAAL+FYWLLY+VTHLVV++EQLN
Sbjct: 61  WKYETRPSCEGDSCTPSEYLRHQKSIMKSQRNALLIAAALIFYWLLYTVTHLVVRIEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Lsi04G011110 vs. TAIR 10
Match: AT5G17190.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 234.6 bits (597), Expect = 4.6e-62
Identity = 115/130 (88.46%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMV+LLT+PGLD LRKGLVAVTRNLLKPFLS++PFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVILLTMPGLDALRKGLVAVTRNLLKPFLSIIPFCLFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYETRP+C+ DSCTPSE+LRHQKSIMKSQRNALLIA+ALVFYW+LYSVT+LVV++EQLN
Sbjct: 61  WKYETRPSCDGDSCTPSEHLRHQKSIMKSQRNALLIASALVFYWILYSVTNLVVRIEQLN 120

Query: 121 QRVERLKNRD 131
           QRVERLKN+D
Sbjct: 121 QRVERLKNKD 130

[Close]

BLAST of Lsi04G011110 vs. TAIR 10
Match: AT3G03160.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 232.3 bits (591), Expect = 2.3e-61
Identity = 114/130 (87.69%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMV+LLT+PGLDGLRKGLVAVTRNLLKPFLS+VPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVVLLTMPGLDGLRKGLVAVTRNLLKPFLSIVPFCLFLLMDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WKYET P+C+ DSCTPSE+LRHQKS+MKSQRNALLIAAALVFYW+LYSVT+LVVK+E LN
Sbjct: 61  WKYETMPSCDGDSCTPSEHLRHQKSMMKSQRNALLIAAALVFYWILYSVTNLVVKIEHLN 120

Query: 121 QRVERLKNRD 131
           QR+ERL+N+D
Sbjct: 121 QRIERLRNKD 130

[Close]

BLAST of Lsi04G011110 vs. TAIR 10
Match: AT3G17780.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated 31-like (TAIR:AT1G48440.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-22
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MAL+W++L Y  AAE  + ++LTLP    L+K +V++   +L P  S+V F  F L+DIY
Sbjct: 1   MALQWLILSYVVAAEVAIAVILTLPYPMLLKKRIVSLISLILNPAASIVAFAGFQLLDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WK E R  C S+ CT +E  RH+KS+ K+QRN +L AA ++ YW ++ +      +E+L 
Sbjct: 61  WKNEHRLLCSSEVCTTTERDRHEKSVYKAQRNGVLCAAGILLYWCIFRICKYHKDLERLE 120

Query: 121 QRVERLKN 129
           Q  +R K+
Sbjct: 121 QLEKRYKD 128

[Close]

BLAST of Lsi04G011110 vs. TAIR 10
Match: AT1G48440.1 (B-cell receptor-associated 31-like )

HSP 1 Score: 99.8 bits (247), Expect = 1.8e-21
Identity = 53/127 (41.73%), Postives = 80/127 (62.99%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MAL+W++L Y  A E ++ L+LTLP    L+K +V +   +L+P  S+V F  F L+DIY
Sbjct: 1   MALQWLILSYVVAVEVVITLVLTLPYPMLLKKRVVQLVSLILQPAASIVAFAGFQLLDIY 60

Query: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120
           WK E R +C S+ CT +E  R++KSI K+QRN +L AA ++ YW +Y +      +E+L 
Sbjct: 61  WKAEHRLSCSSEVCTATERDRYEKSIYKAQRNVVLCAAGILLYWCIYRICKYNKDLERLE 120

Query: 121 QRVERLK 128
              +R K
Sbjct: 121 ATEKRFK 127

The following BLAST results are available for this feature:

BLAST of Lsi04G011110 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi04G011110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKB0	1.1e-63	99.23	Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FTP8	1.1e-63	99.23	Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A0A0KTU7	1.4e-63	99.23	Endoplasmic reticulum transmembrane protein OS=Cucumis sativus OX=3659 GN=Csa_5G...	[more]
A0A5A7TDF8	1.9e-63	98.46	Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1DM88	1.6e-62	96.92	Endoplasmic reticulum transmembrane protein OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of Lsi04G011110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942023.1	2.3e-63	99.23	uncharacterized protein LOC111447211 [Cucurbita moschata] >XP_022975389.1 unchar...	[more]
XP_004142369.2	3.0e-63	99.23	uncharacterized protein LOC101213354 [Cucumis sativus]	[more]
KAA0040998.1	3.9e-63	98.46	Integral to membrane, endoplasmic reticulum [Cucumis melo var. makuwa] >TYK20348...	[more]
XP_022153951.1	3.3e-62	96.92	uncharacterized protein LOC111021338 [Momordica charantia]	[more]
XP_028952518.1	6.2e-61	93.85	uncharacterized protein LOC114822347 [Malus domestica] >RXH70334.1 hypothetical ...	[more]

BLAST of Lsi04G011110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17190.1	4.6e-62	88.46	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein tra...	[more]
AT3G03160.1	2.3e-61	87.69	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein tra...	[more]
AT3G17780.1	7.9e-22	41.41	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein tra...	[more]
AT1G48440.1	1.8e-21	41.73	B-cell receptor-associated 31-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..129
None	No IPR available	PANTHER	PTHR12701:SF38	B-CELL RECEPTOR-ASSOCIATED-LIKE PROTEIN	coord: 1..130
IPR008417	B-cell receptor-associated protein 29/31	PANTHER	PTHR12701	BCR-ASSOCIATED PROTEIN, BAP	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G011110.1	Lsi04G011110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0070973	protein localization to endoplasmic reticulum exit site
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum