Lsi04G010810 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G010810
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	EAF domain-containing protein
Location	chr04: 12995511 .. 12999467 (+)
RNA-Seq Expression	Lsi04G010810
Synteny	Lsi04G010810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAACCCTAATCTTTTTCCAAGGATAATACGTTTTTCTTTCTCATTCTCTTCATCTCCTTCTTCGTCTATCGTCAGCATCCACAGCTGACGGGTTCTCTCTCTCGCTCTCCTAGTCGCAGGTCACCGCCGTCCAGTCGACGCCGTCGTGGGTTAGGCAAAATCCGCGCGCAACATCAGTCCGGCTGCCCTGTCTTTTCTCTGTTTCGGCGTTCGTTTGTGTAACCCACGACCTATTGGACCTTGAATCGACTTACCGTTCGATCTCTCAATTTTTGCGCAATTTGGAACACTGTACAGCAACGGATTGAGTTCTCTTTGTGAATTTTCATGGGTAACGATCATCTGTAAGCCTTTTTCAATTCAATTGAAATTTTTAGGTTTGAGTGTTAAATTTTGGAATTACTCTATGGATAGTTTCAGCTTGAAAAGATTCGTTAGTTCCGGACTGTCCATTCGAGGTCGAAAGGCGACTTCGAATCAGAAATTTCTTGATAAATATTTGAATCAGCAATGGCAAACAACAATAAAGAAGAGCCGAAGACCGCGCCCCAGCCCGATCGGTGGTATAACCTATCTCTTGGTCCTTCATTCAAGGATGAATCCTCCAACAAATTTTGCACTCTTCGATGTGAGTCAGTCAAATTGATCCCAAATTGAAAAACAAAACCTAATTGGTGTAAATTCTTTTGCCGCGAAACTGCGGGATGTGAGAAATTAGTTTTTTTTTTTTTTTGCCTTTGTTTATTTCTTCTGTCAAATCGTTTGAATTGTTTTTGCATTGTGGTTTTAGATGAATTTAAGCCGGCGTCAATTGATAAAACGAAGTCGGGATCGCTGAAAAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAATCAATTTGGGAAACCCAATGTGGCGTTTGTTGGTAGTAGTGAGGATTATAAGGAGAATGATGCTGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAGCAGCTTCGTCACCTTCGACAGCCAGGTGAATCTGCTGCTGCGGCTGCTGCCACTGCCACTGCCACTACCGCTGGCGTGGCTGCCCCCGCTGCCACATCTACCACTGCTTCTGTCCTTCATTCTTTGACGCCACCGGAGCCTCGGTTATCTCCGCCAGTGGCTAAAGTTTCCAAACCTATGCATATGGGTCGGGGCAGTTTTCCAACGATGCCGGTGAGAGCTCTTTATGAATTATTTCCTAATTGTATAAACTTATATGAAATAGAACAAGCATTTGAAATTTTGTTATTTACATGCTGAAAAAGTTTCATATTAGCCATGATACCATCTTAAATCACCAATTGACCCAAAAGCTTAAGCTGGCATGTGAGACAAATTTTAATATAATATCTAATACTCTCTCTCACTTGCGGGCTTGAAATATGAAGAATAGCCAAGCAAATGGAAATGGATATTAATTGGGGAGGAAACAACAATGCAGGGGTTTGAACTGAAGCAACCTGCTCTGGTACCATCTTAGATCACCAATTGACCCAAAAGCTTTGTTTCCTCTCCAATTAATATCCATTTCCATTTGCTTGGCTATTCTTCATATTTCAAGTCCGCAAGTGAGTGGGAGTGTTAGATATAATATTAAATTTGCCTTCACCTATAAACTTAAGTTTTTGGGTGAATCGGCGATTTAAGATGCGCTCTTGCTTCTGTAAGGCAAGAATCCCATAATTTATTTAAAGTGTTTTTGAACAAGATATTTTCTATGGATTGTATAACTTTGGCCTTTGAGTTCTAATACGTGCTGCATTTACAGGTAGAGGTGGAAAGAATAGATATTGGAGAGCCAGGAAATACAGGTCAATATGCTAATCTGGTTCTACTATAATTTTTCTGGATTTGTATGTAGTTTGTGGTAATCAGTTGGCTGTCCACTCCATGGTATTTGCTGATTGTGAAACGATTTCAGAGCAAACACTACCTCTGATTTCAAAATTGGATCCCTTACCTACTATGTAGTATATCCATTGTGGTTGTTTCTGCCCCATTGGTGTCTTAATTTACAACATGCAGTTTTTTCTTTTAAATAAGAAACCAAGCTTGAGAAAAATGAAAGGAACAAAAGGCAATGCAAAAATAATGAAAGAGAGCCCATGGAAAAAGGAGCCGTTGGTCACATAAAGTTGTAAAAAGGGGCTTTGTTGAGGAAATGAGAGGAAGAATAATGACAAAAGACCTTTGCTACAGAAATTTAAAGAAATTTGCTGTGCAGTTAGTCTGCATCTGTGTACTTATAGATGATGTGAGAGCAGTTTTATGCCTCGTAGGGATGGATCTTAGATTCTTAAGTTTCTAAGTGAGATATGTTAGTGTGTTGCAACTTTTGTTCTTCATCTTTAACCTTATTTTGGGAAGTTATCTTTTCTTAAGATGATAACTATTCATGAAGTCAGGATGTAATGTCGTCTGCAAGTTTCAGTCCTTACGGGCCTCTTGCATCATTCCTAACAGGATAAACGTTGAAAAGAAATGCATTTTGTTGATTATTTGTTTGAAGATTTTGAAGCATCGTCTAAACAGATTTTTCTTCTGGACTCTAATTTTTGTTTAATTTTTATGGGCAATAATTTGATAGTATCGCCCAGCATATTGAACAACCTGTTTTACTCAAAGAGTCAAGGCCAAACGACATTTATCTTTAGTAGAATTTATTGCTTCAATGTGTTCAGCGGATGTTGAAATCTTGTTCGCTGGATGTCTTTCGCTTTATTTGTAAGAACGCCATTCCTCCCAGAAATAAGTACACATTTTTCGGATATTCAGATTGTCTTTGGTTCCATTTGTCACTGTGGTGTTCTCCAATAGATGAAACAGGAGAATCTCTCTTCAGAATGTGGTTATTGCTTAGCTAAACAGTTCATGTCTTCTTATGTTCTTTGATGTTTCTTCTAGTGTTCAACTCTATAAGGGCTGCTGTTTTGATTATTTCATTGAACTTGAGCAAGTAAACATTCAAGTGATGTATGTTTTAATTATCACCATTCTTTCCTCTTATCTAAAATATGTTTATGCTCATGGCAGGTGCAAAATCTGGTGTTGCTAGTAAAGGGATTACGGATTACTCATCAGATCCACCAAATGTATCTGCTTCCTCTCCTGGCGTGAAGTATGATGATGAGCATCAAGATATACATATTGATGATATTTTTGGGTCTCTTTCATCTGATGATGGAAATAATGCTGAAGAAGAAAGAGTTGAGACTGGATTCGATATAAATATACCACATCAAAATGATACCGACGATGAGATTGCTGATGTGGATGATAGTGGCGACGAAGCTGAGAAAGGGCCTAATGCTGCAGAAGCCCTCAGAGCTCAGGTTAATGCTGAGGGTAGGGAGGGACCTACTGCAGCAGCTGCCCTCAGAGCTCAGGTTAATGCAGAGGGTAGGGACGACCAGAGCTCGAGTTCTAGTAGTAGCGGATCGGGCAGTGGCAGCAGCAGTGGAAGTAGCAGTGGCAGCAGTGACAGTGAAGGTAGTGATGAGGATTCGGTTACCTCAATCTGATGGAAATGAAGCTGAAGAAATCTTGAGGTTTGAGAAGCCGTCTACTGATGAGATCTTGAGCTTTGAGTAAGACTGTCAAAGTTCACACTTCATTGTGGTTCATACATAATTTTTCTAATGGAAGTTGAGTTTTTATTTCCGTATAAAAATTGTCGTGATGGAAATCAAACCACCGATCAAGAAGGGGGTGCATGCCAATTCTCGCTGAGCTAAGCTTATTTTGGCATTGAGGGTTGATTTGAATGCTAATAATTTAATTGTAACATAATTTTCAAATATAGTGATTTTGGTTCATGAGGTTCAATTCTACTGATGCAGGGTTTTATCTTTTGATTCAAATTTAGGACTTCTTAGCAGTAAAGAATAAATTTTGGGTAAAATTATACTTTTG

mRNA sequence

CAAAAACCCTAATCTTTTTCCAAGGATAATACGTTTTTCTTTCTCATTCTCTTCATCTCCTTCTTCGTCTATCGTCAGCATCCACAGCTGACGGGTTCTCTCTCTCGCTCTCCTAGTCGCAGGTCACCGCCGTCCAGTCGACGCCGTCGTGGGTTAGGCAAAATCCGCGCGCAACATCAGTCCGGCTGCCCTGTCTTTTCTCTGTTTCGGCGTTCGTTTGTGTAACCCACGACCTATTGGACCTTGAATCGACTTACCGTTCGATCTCTCAATTTTTGCGCAATTTGGAACACTGTACAGCAACGGATTGAGTTCTCTTTGTGAATTTTCATGGTTTCAGCTTGAAAAGATTCGTTAGTTCCGGACTGTCCATTCGAGGTCGAAAGGCGACTTCGAATCAGAAATTTCTTGATAAATATTTGAATCAGCAATGGCAAACAACAATAAAGAAGAGCCGAAGACCGCGCCCCAGCCCGATCGGTGGTATAACCTATCTCTTGGTCCTTCATTCAAGGATGAATCCTCCAACAAATTTTGCACTCTTCGATATGAATTTAAGCCGGCGTCAATTGATAAAACGAAGTCGGGATCGCTGAAAAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAATCAATTTGGGAAACCCAATGTGGCGTTTGTTGGTAGTAGTGAGGATTATAAGGAGAATGATGCTGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAGCAGCTTCGTCACCTTCGACAGCCAGGTGAATCTGCTGCTGCGGCTGCTGCCACTGCCACTGCCACTACCGCTGGCGTGGCTGCCCCCGCTGCCACATCTACCACTGCTTCTGTCCTTCATTCTTTGACGCCACCGGAGCCTCGGTTATCTCCGCCAGTGGCTAAAGTTTCCAAACCTATGCATATGGGTCGGGGCAGTTTTCCAACGATGCCGGTAGAGGTGGAAAGAATAGATATTGGAGAGCCAGGAAATACAGGTCAATATGCTAATCTGTTAGTCTGCATCTGTGTACTTATAGATGATGTGAGAGCAGTTTTATGCCTCGTAGGGATGGATCTTAGATTCTTAAGATGTAATGTCGTCTGCAAGTTTCAGTCCTTACGGGCCTCTTGCATCATTCCTAACAGGATAAACCGGATGTTGAAATCTTGTTCGCTGGATGTCTTTCGCTTTATTTGTAAGAACGCCATTCCTCCCAGAAATAAGTACACATTTTTCGGATATTCAGATTGTGCAAAATCTGGTGTTGCTAGTAAAGGGATTACGGATTACTCATCAGATCCACCAAATGTATCTGCTTCCTCTCCTGGCGTGAAGTATGATGATGAGCATCAAGATATACATATTGATGATATTTTTGGGTCTCTTTCATCTGATGATGGAAATAATGCTGAAGAAGAAAGAGTTGAGACTGGATTCGATATAAATATACCACATCAAAATGATACCGACGATGAGATTGCTGATGTGGATGATAGTGGCGACGAAGCTGAGAAAGGGCCTAATGCTGCAGAAGCCCTCAGAGCTCAGGTTAATGCTGAGGGTAGGGAGGGACCTACTGCAGCAGCTGCCCTCAGAGCTCAGGTTAATGCAGAGGGTAGGGACGACCAGAGCTCGAGTTCTAGTAGTAGCGGATCGGGCAGTGGCAGCAGCAGTGGAAGTAGCAGTGGCAGCAGTGACAGTGAAGGTAGTGATGAGGATTCGGTTACCTCAATCTGATGGAAATGAAGCTGAAGAAATCTTGAGGTTTGAGAAGCCGTCTACTGATGAGATCTTGAGCTTTGAGTAAGACTGTCAAAGTTCACACTTCATTGTGGTTCATACATAATTTTTCTAATGGAAGTTGAGTTTTTATTTCCGTATAAAAATTGTCGTGATGGAAATCAAACCACCGATCAAGAAGGGGGTGCATGCCAATTCTCGCTGAGCTAAGCTTATTTTGGCATTGAGGGTTGATTTGAATGCTAATAATTTAATTGTAACATAATTTTCAAATATAGTGATTTTGGTTCATGAGGTTCAATTCTACTGATGCAGGGTTTTATCTTTTGATTCAAATTTAGGACTTCTTAGCAGTAAAGAATAAATTTTGGGTAAAATTATACTTTTG

Coding sequence (CDS)

ATGGCAAACAACAATAAAGAAGAGCCGAAGACCGCGCCCCAGCCCGATCGGTGGTATAACCTATCTCTTGGTCCTTCATTCAAGGATGAATCCTCCAACAAATTTTGCACTCTTCGATATGAATTTAAGCCGGCGTCAATTGATAAAACGAAGTCGGGATCGCTGAAAAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAATCAATTTGGGAAACCCAATGTGGCGTTTGTTGGTAGTAGTGAGGATTATAAGGAGAATGATGCTGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAGCAGCTTCGTCACCTTCGACAGCCAGGTGAATCTGCTGCTGCGGCTGCTGCCACTGCCACTGCCACTACCGCTGGCGTGGCTGCCCCCGCTGCCACATCTACCACTGCTTCTGTCCTTCATTCTTTGACGCCACCGGAGCCTCGGTTATCTCCGCCAGTGGCTAAAGTTTCCAAACCTATGCATATGGGTCGGGGCAGTTTTCCAACGATGCCGGTAGAGGTGGAAAGAATAGATATTGGAGAGCCAGGAAATACAGGTCAATATGCTAATCTGTTAGTCTGCATCTGTGTACTTATAGATGATGTGAGAGCAGTTTTATGCCTCGTAGGGATGGATCTTAGATTCTTAAGATGTAATGTCGTCTGCAAGTTTCAGTCCTTACGGGCCTCTTGCATCATTCCTAACAGGATAAACCGGATGTTGAAATCTTGTTCGCTGGATGTCTTTCGCTTTATTTGTAAGAACGCCATTCCTCCCAGAAATAAGTACACATTTTTCGGATATTCAGATTGTGCAAAATCTGGTGTTGCTAGTAAAGGGATTACGGATTACTCATCAGATCCACCAAATGTATCTGCTTCCTCTCCTGGCGTGAAGTATGATGATGAGCATCAAGATATACATATTGATGATATTTTTGGGTCTCTTTCATCTGATGATGGAAATAATGCTGAAGAAGAAAGAGTTGAGACTGGATTCGATATAAATATACCACATCAAAATGATACCGACGATGAGATTGCTGATGTGGATGATAGTGGCGACGAAGCTGAGAAAGGGCCTAATGCTGCAGAAGCCCTCAGAGCTCAGGTTAATGCTGAGGGTAGGGAGGGACCTACTGCAGCAGCTGCCCTCAGAGCTCAGGTTAATGCAGAGGGTAGGGACGACCAGAGCTCGAGTTCTAGTAGTAGCGGATCGGGCAGTGGCAGCAGCAGTGGAAGTAGCAGTGGCAGCAGTGACAGTGAAGGTAGTGATGAGGATTCGGTTACCTCAATCTGA

Protein sequence

MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

Homology

[Close]

BLAST of Lsi04G010810 vs. ExPASy Swiss-Prot
Match: Q91ZD6 (ELL-associated factor 2 OS=Mus musculus OX=10090 GN=Eaf2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.6e-05
Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 0


Query: 21  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AF 80
           L LG SF+ +    F T+RY+FKPASID +  G+L+  K  +VT+   N +   P V  F
Sbjct: 17  LKLGESFEKQPRCAFHTVRYDFKPASIDTSCEGNLEVGKGEQVTITLPNIEGSTPPVTVF 76

Query: 81  VGSSEDY-KENDAVLFFDGETFRLERL 106
            GS   Y KE   ++  D    RLE+L
Sbjct: 77  KGSKRPYLKECILIINHDTGECRLEKL 103

[Close]

BLAST of Lsi04G010810 vs. ExPASy Swiss-Prot
Match: Q5ZHP7 (ELL-associated factor 2 OS=Gallus gallus OX=9031 GN=EAF2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.9e-05
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 21  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AF 80
           L LG +F+ +    F T+RY+FKPASID    G L+  K  +VT+   N +   P V  F
Sbjct: 16  LQLGETFEKQPRCAFHTVRYDFKPASIDTACEGDLEVGKGEQVTITLPNIEGSTPPVTVF 75

Query: 81  VGSSEDY-KENDAVLFFDGETFRLERLHRAVKQLRHLRQPGES 122
            GS + Y KE   ++  D    RLE+L   +  ++ +R  G S
Sbjct: 76  KGSKKPYLKECILIINHDTGECRLEKLSSNI-TVKKIRAEGSS 117

[Close]

BLAST of Lsi04G010810 vs. ExPASy Swiss-Prot
Match: Q96CJ1 (ELL-associated factor 2 OS=Homo sapiens OX=9606 GN=EAF2 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.9e-05
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 0


Query: 21  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AF 80
           L LG SF+ +    F T+RY+FKPASID +  G L+  +  +VT+   N +   P V  F
Sbjct: 17  LKLGESFEKQPRCAFHTVRYDFKPASIDTSSEGYLEVGEGEQVTITLPNIEGSTPPVTVF 76

Query: 81  VGSSEDY-KENDAVLFFDGETFRLERL 106
            GS + Y KE   ++  D    RLE+L
Sbjct: 77  KGSKKPYLKECILIINHDTGECRLEKL 103

[Close]

BLAST of Lsi04G010810 vs. ExPASy Swiss-Prot
Match: B4HQT6 (Ell-associated factor Eaf OS=Drosophila sechellia OX=7238 GN=Eaf PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.0e-04
Identity = 29/94 (30.85%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 21  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVA 80
           L LG +F  + +S  F T++Y+FKPAS+D ++  S+     N+VTV   N++  G P+  
Sbjct: 23  LKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVTVPNSESSGVPHTV 82

Query: 81  FVGSSEDYKENDAVLFFDGET--FRLERLHRAVK 111
           + G+  +Y + + ++ +D ET    +E+L+  ++
Sbjct: 83  YKGNQREYAK-ECLMIYDKETGAITIEKLNHNIQ 115

[Close]

BLAST of Lsi04G010810 vs. ExPASy Swiss-Prot
Match: Q9D4C5 (ELL-associated factor 1 OS=Mus musculus OX=10090 GN=Eaf1 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 5.0e-04
Identity = 37/108 (34.26%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 21  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AF 80
           L LG SF+      F T+RY+FKPASID +  G L+  K + VT+   +     P +  F
Sbjct: 16  LRLGESFEKRPRASFHTIRYDFKPASIDTSCEGELQVGKGDEVTITLPHIPGSTPPMTVF 75

Query: 81  VGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLRQPGESAAAA 126
            G+   Y + D VL  + +T  + LE+L  ++ Q++  R  G S   A
Sbjct: 76  KGNKRPY-QKDCVLIINHDTGEYVLEKLSSSI-QVKKTRAEGSSKIQA 121

[Close]

BLAST of Lsi04G010810 vs. ExPASy TrEMBL
Match: A0A6J1JWD6 (ELL-associated factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111489464 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 2.5e-144
Identity = 309/442 (69.91%), Postives = 325/442 (73.53%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTM 180
           S+AA  A            AA+ST+AS LHSLTPPEPRLSPP AKV KPMHMGRGSFP++
Sbjct: 121 SSAAGVA------------AASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSV 180

Query: 181 PVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRAS 240
            VEVE+IDIGEPGNTG                                            
Sbjct: 181 LVEVEKIDIGEPGNTG-------------------------------------------- 240

Query: 241 CIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN 300
                                                    AKS VASKG  DYSSDPPN
Sbjct: 241 -----------------------------------------AKSVVASKGPADYSSDPPN 300

Query: 301 VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADV 360
           VSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADV
Sbjct: 301 VSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEEDKVDAGFDINVPHHNDTDDEIADV 345

Query: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGSGS 420
           DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRD+QSSSSSSS SGSGS
Sbjct: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDEQSSSSSSSESGSGS 345

Query: 421 SSGSSSGSSDSEGSDEDSVTSI 443
           SSGSSSGSSDSEG+DEDSVTSI
Sbjct: 421 SSGSSSGSSDSEGTDEDSVTSI 345

[Close]

BLAST of Lsi04G010810 vs. ExPASy TrEMBL
Match: A0A6J1FGX9 (ELL-associated factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111445589 PE=3 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 3.3e-144
Identity = 309/442 (69.91%), Postives = 325/442 (73.53%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTM 180
           S+AAA A            AA+ST+AS LHSLTPPEPRLSPP AKV KPMHMGRGSFP++
Sbjct: 121 SSAAAVA------------AASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSV 180

Query: 181 PVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRAS 240
            VEVE+IDIGEPGNTG                                            
Sbjct: 181 LVEVEKIDIGEPGNTG-------------------------------------------- 240

Query: 241 CIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN 300
                                                    AK  VASKG  DYSSDPPN
Sbjct: 241 -----------------------------------------AKPVVASKGPADYSSDPPN 300

Query: 301 VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADV 360
           VSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADV
Sbjct: 301 VSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEEDKVDAGFDINVPHHNDTDDEIADV 345

Query: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGSGS 420
           DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRD+QSSSSSSS SGSGS
Sbjct: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDEQSSSSSSSESGSGS 345

Query: 421 SSGSSSGSSDSEGSDEDSVTSI 443
           SSGSSSGSSDSEG+DEDSVTSI
Sbjct: 421 SSGSSSGSSDSEGTDEDSVTSI 345

[Close]

BLAST of Lsi04G010810 vs. ExPASy TrEMBL
Match: A0A1S3C0N3 (ELL-associated factor 2 OS=Cucumis melo OX=3656 GN=LOC103495125 PE=3 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 5.0e-140
Identity = 307/443 (69.30%), Postives = 319/443 (72.01%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTK G LKKTKE
Sbjct: 1   MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKE 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETFRLERLHRAV QLRHLRQPGE
Sbjct: 61  NRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETFRLERLHRAVNQLRHLRQPGE 120

Query: 121 SAAAAA-ATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPT 180
           SAAAAA ATAT TTAGVAAPAAT ++ASVLHSLTPPEPRLSPPV KV+KPMHMGR SFPT
Sbjct: 121 SAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPT 180

Query: 181 MPVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRA 240
           MPVEVERIDIGEPGN G                                           
Sbjct: 181 MPVEVERIDIGEPGNAG------------------------------------------- 240

Query: 241 SCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPP 300
                                                     AK  VASKG+TDYSSDPP
Sbjct: 241 ------------------------------------------AKPVVASKGLTDYSSDPP 300

Query: 301 NVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIAD 360
           N S SSPG+K DDEHQDI IDDIFGS+SSDDGNNAEEERVETGFDINIPHQNDTDDEIAD
Sbjct: 301 NASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIAD 340

Query: 361 VDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGSG 420
           VDDSGDEAEKGPNAAEALRAQVNAEGR                   +QSSSSSSSGSGSG
Sbjct: 361 VDDSGDEAEKGPNAAEALRAQVNAEGRA------------------EQSSSSSSSGSGSG 340

Query: 421 SSSGSSSGSSDSEGSDEDSVTSI 443
           SSSGSSS SSDSEGSDEDSVTSI
Sbjct: 421 SSSGSSSASSDSEGSDEDSVTSI 340

[Close]

BLAST of Lsi04G010810 vs. ExPASy TrEMBL
Match: A0A0A0KM56 (EAF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G210030 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 2.3e-137
Identity = 306/442 (69.23%), Postives = 315/442 (71.27%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTK G LKKTKE
Sbjct: 1   MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKE 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVTVEFQN+Q GKPN++FVGSSEDYKENDAVLFFDGETFRLERLHRAV QLRHLRQPGE
Sbjct: 61  NRVTVEFQNSQPGKPNLSFVGSSEDYKENDAVLFFDGETFRLERLHRAVNQLRHLRQPGE 120

Query: 121 SAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTM 180
           SAAA A  A ATTAGVAAPAA  TTASVLHSLTPPEPRLSPPV KVSKPMHMGR SFPTM
Sbjct: 121 SAAAVA--APATTAGVAAPAAAPTTASVLHSLTPPEPRLSPPVTKVSKPMHMGRSSFPTM 180

Query: 181 PVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRAS 240
           PVEVERIDIGEPGN G                                            
Sbjct: 181 PVEVERIDIGEPGNAG-------------------------------------------- 240

Query: 241 CIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN 300
                                                    AK+ VASKG+T+YSSDPPN
Sbjct: 241 -----------------------------------------AKT-VASKGLTNYSSDPPN 300

Query: 301 VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADV 360
           VS SSPG+K DDEHQDI IDDIFGS+SSDDGNNAEEERVE GFDINIPHQNDTDDEIADV
Sbjct: 301 VSVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEPGFDINIPHQNDTDDEIADV 336

Query: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGSGS 420
           DDSGDEAEKGPNAAEALRAQVNAEGR                   +QSSSSSSSGSGSGS
Sbjct: 361 DDSGDEAEKGPNAAEALRAQVNAEGRA------------------EQSSSSSSSGSGSGS 336

Query: 421 SSGSSSGSSDSEGSDEDSVTSI 443
           SSGSSS SSDSE SDEDSVTSI
Sbjct: 421 SSGSSSASSDSEASDEDSVTSI 336

[Close]

BLAST of Lsi04G010810 vs. ExPASy TrEMBL
Match: A0A6J1DE82 (ELL-associated factor 1 OS=Momordica charantia OX=3673 GN=LOC111019621 PE=3 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 9.7e-120
Identity = 273/444 (61.49%), Postives = 291/444 (65.54%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           MAN+NKEEPKTAPQ +RWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTK GSLKKTK+
Sbjct: 1   MANDNKEEPKTAPQSERWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKD 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVTVEFQNNQ G+PNVAFVGSSED KENDAVLFFDGETFRLERLHRAV  LRH+RQ  E
Sbjct: 61  NRVTVEFQNNQLGRPNVAFVGSSEDCKENDAVLFFDGETFRLERLHRAVTHLRHVRQADE 120

Query: 121 SAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTM 180
           S                  A TS T SV HSLT PEPRLSPPVAKV+KPMHMGR SFP +
Sbjct: 121 S------------------ATTSITTSVPHSLTVPEPRLSPPVAKVTKPMHMGRSSFPVV 180

Query: 181 PVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRAS 240
           PVEVERIDIGEPGNTG                                            
Sbjct: 181 PVEVERIDIGEPGNTG-------------------------------------------- 240

Query: 241 CIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN 300
                                                    A S  ASK + DY+SDPPN
Sbjct: 241 -----------------------------------------ASSVAASKEVADYTSDPPN 300

Query: 301 VSA--SSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIA 360
           VSA   SPG+  DDEHQDI ID+IFGS+SSDDGNN EEE+++ GFDIN+PH NDTDDEIA
Sbjct: 301 VSAPSPSPGMDNDDEHQDIDIDEIFGSVSSDDGNNVEEEKIDVGFDINVPHHNDTDDEIA 323

Query: 361 DVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGS 420
           DVDDSGDEA+KGPNAAE                  ALRAQVNAEGRD Q+SSSSSS SGS
Sbjct: 361 DVDDSGDEAQKGPNAAE------------------ALRAQVNAEGRDKQTSSSSSSESGS 323

Query: 421 GSSSGSSSGSSDSEGSDEDSVTSI 443
           GSSSGSSSGSSDSE SDEDSVTSI
Sbjct: 421 GSSSGSSSGSSDSEHSDEDSVTSI 323

[Close]

BLAST of Lsi04G010810 vs. NCBI nr
Match: XP_038893321.1 (ELL-associated factor 2-like [Benincasa hispida])

HSP 1 Score: 570.5 bits (1469), Expect = 1.3e-158
Identity = 338/444 (76.13%), Postives = 345/444 (77.70%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTK GSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAAAAAATATATTAGVAAPAATSTT--ASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFP 180
           SAAAAAA A  TT GVAAPA TST+  AS LHSLTPPEPRLSPPVAKV+KPMHMGRGSFP
Sbjct: 121 SAAAAAA-APPTTTGVAAPATTSTSGVASALHSLTPPEPRLSPPVAKVAKPMHMGRGSFP 180

Query: 181 TMPVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLR 240
           TMPVEVERIDIGEPGNTG                                          
Sbjct: 181 TMPVEVERIDIGEPGNTG------------------------------------------ 240

Query: 241 ASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDP 300
                                                      AKS VASKG+ DYSSDP
Sbjct: 241 -------------------------------------------AKSVVASKGLADYSSDP 300

Query: 301 PNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIA 360
           PNVSASSPG+K DDEHQDI IDD+FGS+ SDDGNNAEEERVETGFDINIPHQNDTDDEIA
Sbjct: 301 PNVSASSPGLKNDDEHQDIDIDDLFGSVLSDDGNNAEEERVETGFDINIPHQNDTDDEIA 358

Query: 361 DVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGS 420
           DVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQV+AEGRDDQSSSSSSSGSGS
Sbjct: 361 DVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVDAEGRDDQSSSSSSSGSGS 358

Query: 421 GSSSGSSSGSSDSEGSDEDSVTSI 443
           GSSSGSSSGSSDSEGSDEDSVTSI
Sbjct: 421 GSSSGSSSGSSDSEGSDEDSVTSI 358

[Close]

BLAST of Lsi04G010810 vs. NCBI nr
Match: XP_022993461.1 (ELL-associated factor 1 [Cucurbita maxima] >XP_023551438.1 ELL-associated factor 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521.9 bits (1343), Expect = 5.2e-144
Identity = 309/442 (69.91%), Postives = 325/442 (73.53%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTM 180
           S+AA  A            AA+ST+AS LHSLTPPEPRLSPP AKV KPMHMGRGSFP++
Sbjct: 121 SSAAGVA------------AASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSV 180

Query: 181 PVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRAS 240
            VEVE+IDIGEPGNTG                                            
Sbjct: 181 LVEVEKIDIGEPGNTG-------------------------------------------- 240

Query: 241 CIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN 300
                                                    AKS VASKG  DYSSDPPN
Sbjct: 241 -----------------------------------------AKSVVASKGPADYSSDPPN 300

Query: 301 VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADV 360
           VSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADV
Sbjct: 301 VSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEEDKVDAGFDINVPHHNDTDDEIADV 345

Query: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGSGS 420
           DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRD+QSSSSSSS SGSGS
Sbjct: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDEQSSSSSSSESGSGS 345

Query: 421 SSGSSSGSSDSEGSDEDSVTSI 443
           SSGSSSGSSDSEG+DEDSVTSI
Sbjct: 421 SSGSSSGSSDSEGTDEDSVTSI 345

[Close]

BLAST of Lsi04G010810 vs. NCBI nr
Match: XP_022939831.1 (ELL-associated factor 1 [Cucurbita moschata] >KAG7016756.1 Ell-associated factor Eaf [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 521.5 bits (1342), Expect = 6.9e-144
Identity = 309/442 (69.91%), Postives = 325/442 (73.53%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTM 180
           S+AAA A            AA+ST+AS LHSLTPPEPRLSPP AKV KPMHMGRGSFP++
Sbjct: 121 SSAAAVA------------AASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSV 180

Query: 181 PVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRAS 240
            VEVE+IDIGEPGNTG                                            
Sbjct: 181 LVEVEKIDIGEPGNTG-------------------------------------------- 240

Query: 241 CIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN 300
                                                    AK  VASKG  DYSSDPPN
Sbjct: 241 -----------------------------------------AKPVVASKGPADYSSDPPN 300

Query: 301 VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADV 360
           VSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADV
Sbjct: 301 VSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEEDKVDAGFDINVPHHNDTDDEIADV 345

Query: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGSGS 420
           DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRD+QSSSSSSS SGSGS
Sbjct: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDEQSSSSSSSESGSGS 345

Query: 421 SSGSSSGSSDSEGSDEDSVTSI 443
           SSGSSSGSSDSEG+DEDSVTSI
Sbjct: 421 SSGSSSGSSDSEGTDEDSVTSI 345

[Close]

BLAST of Lsi04G010810 vs. NCBI nr
Match: KAG6579241.1 (Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 519.2 bits (1336), Expect = 3.4e-143
Identity = 307/442 (69.46%), Postives = 324/442 (73.30%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTM 180
           S+AAA A             A+ST+AS +HSLTPPEPRLSPP AKV KPMHMGRGSFP++
Sbjct: 121 SSAAAVA------------VASSTSASAIHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSV 180

Query: 181 PVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRAS 240
            VEVE+IDIGEPGNTG                                            
Sbjct: 181 LVEVEKIDIGEPGNTG-------------------------------------------- 240

Query: 241 CIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN 300
                                                    AK  VASKG  DYSSDPPN
Sbjct: 241 -----------------------------------------AKPVVASKGPADYSSDPPN 300

Query: 301 VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADV 360
           VSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADV
Sbjct: 301 VSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEEDKVDAGFDINVPHHNDTDDEIADV 345

Query: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGSGS 420
           DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRD+QSSSSSSS SGSGS
Sbjct: 361 DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDEQSSSSSSSESGSGS 345

Query: 421 SSGSSSGSSDSEGSDEDSVTSI 443
           SSGSSSGSSDSEG+DEDSVTSI
Sbjct: 421 SSGSSSGSSDSEGTDEDSVTSI 345

[Close]

BLAST of Lsi04G010810 vs. NCBI nr
Match: XP_008454810.1 (PREDICTED: ELL-associated factor 2 [Cucumis melo] >XP_008454811.1 PREDICTED: ELL-associated factor 2 [Cucumis melo])

HSP 1 Score: 507.7 bits (1306), Expect = 1.0e-139
Identity = 307/443 (69.30%), Postives = 319/443 (72.01%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTK G LKKTKE
Sbjct: 1   MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKE 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETFRLERLHRAV QLRHLRQPGE
Sbjct: 61  NRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETFRLERLHRAVNQLRHLRQPGE 120

Query: 121 SAAAAA-ATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPT 180
           SAAAAA ATAT TTAGVAAPAAT ++ASVLHSLTPPEPRLSPPV KV+KPMHMGR SFPT
Sbjct: 121 SAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPT 180

Query: 181 MPVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRA 240
           MPVEVERIDIGEPGN G                                           
Sbjct: 181 MPVEVERIDIGEPGNAG------------------------------------------- 240

Query: 241 SCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPP 300
                                                     AK  VASKG+TDYSSDPP
Sbjct: 241 ------------------------------------------AKPVVASKGLTDYSSDPP 300

Query: 301 NVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIAD 360
           N S SSPG+K DDEHQDI IDDIFGS+SSDDGNNAEEERVETGFDINIPHQNDTDDEIAD
Sbjct: 301 NASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIAD 340

Query: 361 VDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGSG 420
           VDDSGDEAEKGPNAAEALRAQVNAEGR                   +QSSSSSSSGSGSG
Sbjct: 361 VDDSGDEAEKGPNAAEALRAQVNAEGRA------------------EQSSSSSSSGSGSG 340

Query: 421 SSSGSSSGSSDSEGSDEDSVTSI 443
           SSSGSSS SSDSEGSDEDSVTSI
Sbjct: 421 SSSGSSSASSDSEGSDEDSVTSI 340

[Close]

BLAST of Lsi04G010810 vs. TAIR 10
Match: AT1G71080.1 (RNA polymerase II transcription elongation factor )

HSP 1 Score: 235.0 bits (598), Expect = 1.2e-61
Identity = 185/446 (41.48%), Postives = 239/446 (53.59%), Query Frame = 0


Query: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKE 60
           M+N++++EP TAP+ D+WY+L LG S KD+SS+KFCTLRYEFKPASIDK +SGS+ K K+
Sbjct: 1   MSNHSRDEPSTAPKTDQWYDLVLGSSAKDDSSHKFCTLRYEFKPASIDKNRSGSMHKKKD 60

Query: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRV+VEFQNNQ GKP V F GSSEDYKE+DAVLFFDGE FRLERLHRAV QLRH+R PGE
Sbjct: 61  NRVSVEFQNNQPGKPKVTFEGSSEDYKESDAVLFFDGEKFRLERLHRAVTQLRHVRTPGE 120

Query: 121 SAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTM 180
           SAAA+                         S  P E RLS PV + +K   + R   P +
Sbjct: 121 SAAAS------------------------QSAVPVEHRLS-PVGRAAKSPQVNRSLLPDV 180

Query: 181 PVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRAS 240
           PVEVERI+IG+P N+ + AN                                        
Sbjct: 181 PVEVERIEIGKPENSAEPAN---------------------------------------- 240

Query: 241 CIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN 300
                                     +P                  A+  + D + D   
Sbjct: 241 -----------------------TGNVP------------------ATSPVEDKNDD--- 300

Query: 301 VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQ--NDTDDEIA 360
                      DEHQ+I + +IFGS + ++ +NAE+E  + G  +   ++  + T++EIA
Sbjct: 301 ----------GDEHQEIDLVEIFGSFTPEN-DNAEKENADGGEYVESLNKQLSMTEEEIA 326

Query: 361 DV-DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSG 420
           DV DDSG E EKG NAAEALRAQVNAE ++  T++++  +  ++    D  S S SSGSG
Sbjct: 361 DVDDDSGGEGEKGLNAAEALRAQVNAEVQKSQTSSSSSSSGSSSGSDSDGRSKSVSSGSG 326

Query: 421 SGSSSGSSSGSSDSEGS-DEDSVTSI 443
           SG  S S S S  S GS DED V S+
Sbjct: 421 SGGQSSSGSSSRGSGGSDDEDEVNSV 326

[Close]

BLAST of Lsi04G010810 vs. TAIR 10
Match: AT5G38050.1 (RNA polymerase II transcription elongation factor )

HSP 1 Score: 146.4 bits (368), Expect = 5.6e-35
Identity = 145/440 (32.95%), Postives = 189/440 (42.95%), Query Frame = 0


Query: 3   NNNKEEPKTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKTKSGSLKKTK 62
           +N+ EEPK AP+P+RWYN++LGP+  + +   S KFCTLRYEFKPASID TK G L K+K
Sbjct: 2   DNHNEEPKIAPEPNRWYNITLGPTLLNNNHSYSPKFCTLRYEFKPASIDSTKPGLLHKSK 61

Query: 63  ENRVTVEFQNNQFGKPNVAFVGSSEDY--KENDAVLFFDGETFRLERLHRAVKQLRHLRQ 122
           +N+VT+EFQNNQ  KP V F G SEDY  ++ DA+LFFDGE FRLE+LHR+VK+L+ LR 
Sbjct: 62  DNKVTLEFQNNQLNKPKVRFDGVSEDYNDRDKDAILFFDGENFRLEKLHRSVKRLKCLRV 121

Query: 123 PGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSF 182
           P ESA+A+                                ++ PPV K            
Sbjct: 122 PDESASASRVVT----------------------------KIVPPVEK------------ 181

Query: 183 PTMPVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSL 242
              PV++  IDI  P                                             
Sbjct: 182 ---PVKMAHIDINNP--------------------------------------------- 241

Query: 243 RASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSD 302
                                                                       
Sbjct: 242 ------------------------------------------------------------ 269

Query: 303 PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETG---FDINIPHQND-T 362
                         D  +D++I+D       ++      +  +TG    DIN+PH  +  
Sbjct: 302 -------------VDFEEDVNIED------DNEEETLSRKEFQTGGLDIDINLPHPAEME 269

Query: 363 DDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSS 422
           DDEIA VD + DE+ KG NAAEALRAQVNAE RE      + ++  +  GR+ +SS S  
Sbjct: 362 DDEIAVVDINDDESYKGLNAAEALRAQVNAEARE-----ESRKSSSSGSGRESESSESGV 269

Query: 423 SGSGSGSSSGSSSGSSDSEG 434
             SGSGSSS S S  S SEG
Sbjct: 422 ESSGSGSSSTSESRKSGSEG 269

The following BLAST results are available for this feature:

BLAST of Lsi04G010810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91ZD6	2.6e-05	40.23	ELL-associated factor 2 OS=Mus musculus OX=10090 GN=Eaf2 PE=1 SV=1	[more]
Q5ZHP7	5.9e-05	35.92	ELL-associated factor 2 OS=Gallus gallus OX=9031 GN=EAF2 PE=2 SV=1	[more]
Q96CJ1	5.9e-05	39.08	ELL-associated factor 2 OS=Homo sapiens OX=9606 GN=EAF2 PE=1 SV=1	[more]
B4HQT6	1.0e-04	30.85	Ell-associated factor Eaf OS=Drosophila sechellia OX=7238 GN=Eaf PE=3 SV=1	[more]
Q9D4C5	5.0e-04	34.26	ELL-associated factor 1 OS=Mus musculus OX=10090 GN=Eaf1 PE=1 SV=2	[more]

BLAST of Lsi04G010810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWD6	2.5e-144	69.91	ELL-associated factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111489464 PE=3 SV=1	[more]
A0A6J1FGX9	3.3e-144	69.91	ELL-associated factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111445589 PE=3 SV=1	[more]
A0A1S3C0N3	5.0e-140	69.30	ELL-associated factor 2 OS=Cucumis melo OX=3656 GN=LOC103495125 PE=3 SV=1	[more]
A0A0A0KM56	2.3e-137	69.23	EAF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G210030 PE=3 SV...	[more]
A0A6J1DE82	9.7e-120	61.49	ELL-associated factor 1 OS=Momordica charantia OX=3673 GN=LOC111019621 PE=3 SV=1	[more]

BLAST of Lsi04G010810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893321.1	1.3e-158	76.13	ELL-associated factor 2-like [Benincasa hispida]	[more]
XP_022993461.1	5.2e-144	69.91	ELL-associated factor 1 [Cucurbita maxima] >XP_023551438.1 ELL-associated factor...	[more]
XP_022939831.1	6.9e-144	69.91	ELL-associated factor 1 [Cucurbita moschata] >KAG7016756.1 Ell-associated factor...	[more]
KAG6579241.1	3.4e-143	69.46	Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008454810.1	1.0e-139	69.30	PREDICTED: ELL-associated factor 2 [Cucumis melo] >XP_008454811.1 PREDICTED: ELL...	[more]

BLAST of Lsi04G010810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71080.1	1.2e-61	41.48	RNA polymerase II transcription elongation factor	[more]
AT5G38050.1	5.6e-35	32.95	RNA polymerase II transcription elongation factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019194	Transcription elongation factor Eaf, N-terminal	PFAM	PF09816	EAF	coord: 19..117 e-value: 2.1E-20 score: 73.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 402..442
None	No IPR available	PANTHER	PTHR15970:SF13	TRANSCRIPTION ELOGNATION FACTOR EAF-RELATED	coord: 386..442
None	No IPR available	PANTHER	PTHR15970:SF13	TRANSCRIPTION ELOGNATION FACTOR EAF-RELATED	coord: 1..197
None	No IPR available	PANTHER	PTHR15970:SF13	TRANSCRIPTION ELOGNATION FACTOR EAF-RELATED	coord: 283..388
IPR027093	EAF family	PANTHER	PTHR15970	ELL-ASSOCIATED FACTOR EAF	coord: 386..442
IPR027093	EAF family	PANTHER	PTHR15970	ELL-ASSOCIATED FACTOR EAF	coord: 1..197
IPR027093	EAF family	PANTHER	PTHR15970	ELL-ASSOCIATED FACTOR EAF	coord: 283..388

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G010810.1	Lsi04G010810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0034243	regulation of transcription elongation from RNA polymerase II promoter
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0032783	super elongation complex
molecular_function	GO:0003711	transcription elongation regulator activity