Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTAACACAGAACAAACTGGACATGGTCAATCAATTGGTGTACACCTTAATGAAGCATTTTGTAGGACGTACAACCGTATATTCCAATCAAGCCACAGAGGCTCTCTTGAAAATGAGATGTCGAAAGATGAACGACTTCAAGTGGTATAAAGACGTCTTTATGGCTTGTGTTTATAATCTCACTTCCTGTAGAGATGAAATCTGGAAGCGAAAGTTCATGGAAGGATTACCCCCTTACATTGCAGAGAAGTTTTATCAAAGAAGGTCCGAAAGTTTTGAAGAAGGACAGATCAATTGGAATGCCCTCGCCTACGGGGACATTACCAACAATATCCAGGCATTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATTATCAAAGATGCAGATTACTAGAAGGAACTAGTAACATTCTATAAGAAATATGGCGTTGAGCAAGGATTACCGCCATCAAAGAAAAAGAAAAAATCATCCAAAAGGCTTTTTAGCAGAAGCAAAAACAAGCAACAGAATGATGAAAAGCACCGAAAGAGGAAATATTATAACATAAGTAAGAAGTATTCTAAGAAAAAGGAAACTACTTGCTTCCGATGTAATAAACAGGGACATTATGCCAACAGATGCCCTTTGATGAAGAAGGTCAATAATCTAGAAATCGACAAAGACCTAAAACAACCTCTTCTCTTTGCTATTCGTGACAAAGAAGAAGATATGTCCATCTCGGGAGACTCTTCCACCGAAGAAGGATTTATCAATGAAGTAGTAGAAGATTCCTCCTCTGAAGCAGAATCTTTCGACTCCTCCCAATATTCAGACGATGCAATACCATGCACCGGTTGTATAAATGTTCTAACAAGAGATCAGGAACATATGCTTGATCTTATAGAAGAACTTCCAGACGAAGCCTCCCGAAGAACAGCCCTTCTTAAGCTTTGCAACTCTCTCGAAGAACAAAAGTCGAAAGCTCAAGAATTCGAGCCAATATAA
mRNA sequence
ATGGAGAACAAACTGGACATGGTCAATCAATTGGTGTACACCTTAATGAAGCATTTTGTAGGACGTACAACCGTATATTCCAATCAAGCCACAGAGGCTCTCTTGAAAATGAGATGTCGAAAGATGAACGACTTCAAGTGGTATAAAGACGTCTTTATGGCTTGTGTTTATAATCTCACTTCCTGTAGAGATGAAATCTGGAAGCGAAAGTTCATGGAAGGATTACCCCCTTACATTGCAGAGAAGTTTTATCAAAGAAGGTCCGAAAGTTTTGAAGAAGGACAGATCAATTGGAATGCCCTCGCCTACGGGGACATTACCAACAATATCCAGGCATTATGCTTAAAAGATTCCTCCTCTGAAGCAGAATCTTTCGACTCCTCCCAATATTCAGACGATGCAATACCATGCACCGGTTGTATAAATGTTCTAACAAGAGATCAGGAACATATGCTTGATCTTATAGAAGAACTTCCAGACGAAGCCTCCCGAAGAACAGCCCTTCTTAAGCTTTGCAACTCTCTCGAAGAACAAAAGTCGAAAGCTCAAGAATTCGAGCCAATATAA
Coding sequence (CDS)
ATGGAGAACAAACTGGACATGGTCAATCAATTGGTGTACACCTTAATGAAGCATTTTGTAGGACGTACAACCGTATATTCCAATCAAGCCACAGAGGCTCTCTTGAAAATGAGATGTCGAAAGATGAACGACTTCAAGTGGTATAAAGACGTCTTTATGGCTTGTGTTTATAATCTCACTTCCTGTAGAGATGAAATCTGGAAGCGAAAGTTCATGGAAGGATTACCCCCTTACATTGCAGAGAAGTTTTATCAAAGAAGGTCCGAAAGTTTTGAAGAAGGACAGATCAATTGGAATGCCCTCGCCTACGGGGACATTACCAACAATATCCAGGCATTATGCTTAAAAGATTCCTCCTCTGAAGCAGAATCTTTCGACTCCTCCCAATATTCAGACGATGCAATACCATGCACCGGTTGTATAAATGTTCTAACAAGAGATCAGGAACATATGCTTGATCTTATAGAAGAACTTCCAGACGAAGCCTCCCGAAGAACAGCCCTTCTTAAGCTTTGCAACTCTCTCGAAGAACAAAAGTCGAAAGCTCAAGAATTCGAGCCAATATAA
Protein sequence
MENKLDMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALCLKDSSSEAESFDSSQYSDDAIPCTGCINVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI
Homology
BLAST of Lsi04G010030 vs. ExPASy TrEMBL
Match:
A0A5D3DIF5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001850 PE=4 SV=1)
HSP 1 Score: 155.2 bits (391), Expect = 2.7e-34
Identity = 90/269 (33.46%), Postives = 125/269 (46.47%), Query Frame = 0
Query: 8 VNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIW 67
VN +VY +KHFVGRTT+YS+Q+ EALL M+C KM+DFKWYKD FM+ +YN T CRD +W
Sbjct: 170 VNTVVYAAIKHFVGRTTLYSDQSMEALLGMKCPKMSDFKWYKDTFMSRLYNRTICRDVVW 229
Query: 68 KRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALC------------- 127
K K++EGL Y+ EKFY + I+W ++YGDI + IQ +C
Sbjct: 230 KHKYVEGLHKYVREKFYSTMVTNSRGTDIDWGGISYGDINSTIQKVCLEIRQQQKHATKI 289
Query: 128 ------------------------------------------------------------ 185
Sbjct: 290 AKDLDYRREIGSFCKQYGIDNTPPSRKKSRSKKILGRSKTSESHGYSNRKSKYHGETEEL 349
BLAST of Lsi04G010030 vs. ExPASy TrEMBL
Match:
A0A5A7UTK4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00230 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 1.2e-31
Identity = 101/300 (33.67%), Postives = 134/300 (44.67%), Query Frame = 0
Query: 6 DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDE 65
DMVNQL+YT+ KHF+G ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C
Sbjct: 604 DMVNQLLYTMTKHFIGSIQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGAN 663
Query: 66 IWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALC----------- 125
IWK KF+EGLP YI++KFYQ + + QI+W L Y DI++ +Q +C
Sbjct: 664 IWKHKFVEGLPHYISQKFYQIMTANSVIQQIDWANLTYRDISSTVQMICVNLCTENKHTM 723
Query: 126 --LKD------------------------------------------------------- 185
+KD
Sbjct: 724 KVIKDSDYRKELGTFCKQYGLSPGPKEEKNKKKKYSSKKFFRRNKPKDQEPPRRRRHYYN 783
Query: 186 ---------------------------------------SSSEAESFDSSQYSDD--AIP 189
SSSE E + S+ SDD AIP
Sbjct: 784 KNEETKQSLLYAIKSDDDTSSQTESSSEEDYINILQEEGSSSEDEFYSQSESSDDEGAIP 843
BLAST of Lsi04G010030 vs. ExPASy TrEMBL
Match:
A0A5D3BA08 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold535G00180 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 1.2e-31
Identity = 101/300 (33.67%), Postives = 134/300 (44.67%), Query Frame = 0
Query: 6 DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDE 65
DMVNQL+YT+ KHF+G ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C
Sbjct: 441 DMVNQLLYTMTKHFIGSIQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGAN 500
Query: 66 IWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALC----------- 125
IWK KF+EGLP YI++KFYQ + + QI+W L Y DI++ +Q +C
Sbjct: 501 IWKHKFVEGLPHYISQKFYQIMTANSVIQQIDWANLTYRDISSTVQMICVNLCTENKHTM 560
Query: 126 --LKD------------------------------------------------------- 185
+KD
Sbjct: 561 KVIKDSDYRKELGTFCKQYGLSPGPKEEKNKKKKYSSKKFFRRNKPKDQEPPRRRRHYYN 620
Query: 186 ---------------------------------------SSSEAESFDSSQYSDD--AIP 189
SSSE E + S+ SDD AIP
Sbjct: 621 KNEETKQSLLYAIKSDDDTSSQTESSSEEDYINILQEEGSSSEDEFYSQSESSDDEGAIP 680
BLAST of Lsi04G010030 vs. ExPASy TrEMBL
Match:
A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 6.1e-31
Identity = 106/340 (31.18%), Postives = 138/340 (40.59%), Query Frame = 0
Query: 6 DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDE 65
DMVNQL+YT+ KHF+G T ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C +
Sbjct: 733 DMVNQLLYTMTKHFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGAD 792
Query: 66 IWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALC----------- 125
IWK+KF+EGLP YI++KFYQ + + QI+W L YGDI++ +Q +C
Sbjct: 793 IWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTT 852
Query: 126 ------------------------------------------------------------ 185
Sbjct: 853 KVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKTKDQESPQRRKRHY 912
Query: 186 -------------------------------LKD-------------------------- 189
LKD
Sbjct: 913 NKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTT 972
BLAST of Lsi04G010030 vs. ExPASy TrEMBL
Match:
A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 6.1e-31
Identity = 106/340 (31.18%), Postives = 138/340 (40.59%), Query Frame = 0
Query: 6 DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDE 65
DMVNQL+YT+ KHF+G T ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C +
Sbjct: 733 DMVNQLLYTMTKHFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGAD 792
Query: 66 IWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALC----------- 125
IWK+KF+EGLP YI++KFYQ + + QI+W L YGDI++ +Q +C
Sbjct: 793 IWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTT 852
Query: 126 ------------------------------------------------------------ 185
Sbjct: 853 KVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKAKDQESPRRRRRHY 912
Query: 186 -------------------------------LKD-------------------------- 189
LKD
Sbjct: 913 NKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTT 972
BLAST of Lsi04G010030 vs. NCBI nr
Match:
TYK23160.1 (hypothetical protein E5676_scaffold142G001850 [Cucumis melo var. makuwa])
HSP 1 Score: 155.2 bits (391), Expect = 5.5e-34
Identity = 90/269 (33.46%), Postives = 125/269 (46.47%), Query Frame = 0
Query: 8 VNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIW 67
VN +VY +KHFVGRTT+YS+Q+ EALL M+C KM+DFKWYKD FM+ +YN T CRD +W
Sbjct: 170 VNTVVYAAIKHFVGRTTLYSDQSMEALLGMKCPKMSDFKWYKDTFMSRLYNRTICRDVVW 229
Query: 68 KRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALC------------- 127
K K++EGL Y+ EKFY + I+W ++YGDI + IQ +C
Sbjct: 230 KHKYVEGLHKYVREKFYSTMVTNSRGTDIDWGGISYGDINSTIQKVCLEIRQQQKHATKI 289
Query: 128 ------------------------------------------------------------ 185
Sbjct: 290 AKDLDYRREIGSFCKQYGIDNTPPSRKKSRSKKILGRSKTSESHGYSNRKSKYHGETEEL 349
BLAST of Lsi04G010030 vs. NCBI nr
Match:
TYJ96702.1 (hypothetical protein E5676_scaffold535G00180 [Cucumis melo var. makuwa])
HSP 1 Score: 146.4 bits (368), Expect = 2.5e-31
Identity = 101/300 (33.67%), Postives = 134/300 (44.67%), Query Frame = 0
Query: 6 DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDE 65
DMVNQL+YT+ KHF+G ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C
Sbjct: 441 DMVNQLLYTMTKHFIGSIQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGAN 500
Query: 66 IWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALC----------- 125
IWK KF+EGLP YI++KFYQ + + QI+W L Y DI++ +Q +C
Sbjct: 501 IWKHKFVEGLPHYISQKFYQIMTANSVIQQIDWANLTYRDISSTVQMICVNLCTENKHTM 560
Query: 126 --LKD------------------------------------------------------- 185
+KD
Sbjct: 561 KVIKDSDYRKELGTFCKQYGLSPGPKEEKNKKKKYSSKKFFRRNKPKDQEPPRRRRHYYN 620
Query: 186 ---------------------------------------SSSEAESFDSSQYSDD--AIP 189
SSSE E + S+ SDD AIP
Sbjct: 621 KNEETKQSLLYAIKSDDDTSSQTESSSEEDYINILQEEGSSSEDEFYSQSESSDDEGAIP 680
BLAST of Lsi04G010030 vs. NCBI nr
Match:
KAA0058440.1 (hypothetical protein E6C27_scaffold132G00230 [Cucumis melo var. makuwa])
HSP 1 Score: 146.4 bits (368), Expect = 2.5e-31
Identity = 101/300 (33.67%), Postives = 134/300 (44.67%), Query Frame = 0
Query: 6 DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDE 65
DMVNQL+YT+ KHF+G ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C
Sbjct: 604 DMVNQLLYTMTKHFIGSIQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGAN 663
Query: 66 IWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALC----------- 125
IWK KF+EGLP YI++KFYQ + + QI+W L Y DI++ +Q +C
Sbjct: 664 IWKHKFVEGLPHYISQKFYQIMTANSVIQQIDWANLTYRDISSTVQMICVNLCTENKHTM 723
Query: 126 --LKD------------------------------------------------------- 185
+KD
Sbjct: 724 KVIKDSDYRKELGTFCKQYGLSPGPKEEKNKKKKYSSKKFFRRNKPKDQEPPRRRRHYYN 783
Query: 186 ---------------------------------------SSSEAESFDSSQYSDD--AIP 189
SSSE E + S+ SDD AIP
Sbjct: 784 KNEETKQSLLYAIKSDDDTSSQTESSSEEDYINILQEEGSSSEDEFYSQSESSDDEGAIP 843
BLAST of Lsi04G010030 vs. NCBI nr
Match:
TYJ97599.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 144.1 bits (362), Expect = 1.3e-30
Identity = 106/340 (31.18%), Postives = 138/340 (40.59%), Query Frame = 0
Query: 6 DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDE 65
DMVNQL+YT+ KHF+G T ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C +
Sbjct: 733 DMVNQLLYTMTKHFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGAD 792
Query: 66 IWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALC----------- 125
IWK+KF+EGLP YI++KFYQ + + QI+W L YGDI++ +Q +C
Sbjct: 793 IWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTT 852
Query: 126 ------------------------------------------------------------ 185
Sbjct: 853 KVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKTKDQESPQRRKRHY 912
Query: 186 -------------------------------LKD-------------------------- 189
LKD
Sbjct: 913 NKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTT 972
BLAST of Lsi04G010030 vs. NCBI nr
Match:
KAA0056776.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 144.1 bits (362), Expect = 1.3e-30
Identity = 106/340 (31.18%), Postives = 138/340 (40.59%), Query Frame = 0
Query: 6 DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDE 65
DMVNQL+YT+ KHF+G T ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C +
Sbjct: 733 DMVNQLLYTMTKHFIGSTQIHLNLATEALLGLKCHKMSRYKWYKDTFMARLYTLTTCGAD 792
Query: 66 IWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALC----------- 125
IWK+KF+EGLP YI++KFYQ + + QI+W L YGDI++ +Q +C
Sbjct: 793 IWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTT 852
Query: 126 ------------------------------------------------------------ 185
Sbjct: 853 KVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKAKDQESPRRRRRHY 912
Query: 186 -------------------------------LKD-------------------------- 189
LKD
Sbjct: 913 NKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTT 972
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3DIF5 | 2.7e-34 | 33.46 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7UTK4 | 1.2e-31 | 33.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BA08 | 1.2e-31 | 33.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3BEY3 | 6.1e-31 | 31.18 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69... | [more] |
A0A5A7UR29 | 6.1e-31 | 31.18 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48... | [more] |
Match Name | E-value | Identity | Description | |
TYK23160.1 | 5.5e-34 | 33.46 | hypothetical protein E5676_scaffold142G001850 [Cucumis melo var. makuwa] | [more] |
TYJ96702.1 | 2.5e-31 | 33.67 | hypothetical protein E5676_scaffold535G00180 [Cucumis melo var. makuwa] | [more] |
KAA0058440.1 | 2.5e-31 | 33.67 | hypothetical protein E6C27_scaffold132G00230 [Cucumis melo var. makuwa] | [more] |
TYJ97599.1 | 1.3e-30 | 31.18 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0056776.1 | 1.3e-30 | 31.18 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |