Lsi04G009310 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G009310
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	17.8 kDa class I heat shock protein-like
Location	chr04: 9625274 .. 9625753 (+)
RNA-Seq Expression	Lsi04G009310
Synteny	Lsi04G009310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTGATTCCAAGCATTTTCGGTGGTCGCCGGACCAATATCTTCGATCCCTTTTCCTTGGATGTTTGGGATCCATTCGATGGATTTTCATTCTCAAACTCATTGGCTAATGTTCCTTCCTCTACTCGTGAAACCTCTGCTTTTGTCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTCCCTGGAATCAACAAGCAAGAAGTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGATAAATGGCATAGAGTTGAACGAAGTAGTGGTAAGTTCATAAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGAAGAAGTGAAAGCCAGTATGGAGAATGGAGTTCTGACTGTGACAGTACCAAAAGTGGAAGAGAAGAAGCCTGAAATCAAGTCCATTGAAATCTCTGGTTAA

mRNA sequence

ATGTCACTGATTCCAAGCATTTTCGGTGGTCGCCGGACCAATATCTTCGATCCCTTTTCCTTGGATGTTTGGGATCCATTCGATGGATTTTCATTCTCAAACTCATTGGCTAATGTTCCTTCCTCTACTCGTGAAACCTCTGCTTTTGTCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTCCCTGGAATCAACAAGCAAGAAGTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGATAAATGGCATAGAGTTGAACGAAGTAGTGGTAAGTTCATAAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGAAGAAGTGAAAGCCAGTATGGAGAATGGAGTTCTGACTGTGACAGTACCAAAAGTGGAAGAGAAGAAGCCTGAAATCAAGTCCATTGAAATCTCTGGTTAA

Coding sequence (CDS)

ATGTCACTGATTCCAAGCATTTTCGGTGGTCGCCGGACCAATATCTTCGATCCCTTTTCCTTGGATGTTTGGGATCCATTCGATGGATTTTCATTCTCAAACTCATTGGCTAATGTTCCTTCCTCTACTCGTGAAACCTCTGCTTTTGTCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTCCCTGGAATCAACAAGCAAGAAGTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGATAAATGGCATAGAGTTGAACGAAGTAGTGGTAAGTTCATAAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGAAGAAGTGAAAGCCAGTATGGAGAATGGAGTTCTGACTGTGACAGTACCAAAAGTGGAAGAGAAGAAGCCTGAAATCAAGTCCATTGAAATCTCTGGTTAA

Protein sequence

MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETPQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRLPENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG

Homology

[Close]

BLAST of Lsi04G009310 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 247.7 bits (631), Expect = 9.0e-65
Identity = 120/159 (75.47%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           MSLIPSIFGGRRTN+FDPFSLDV+DPF+GF   + LAN P+   + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPA--MDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           +AH+F ADLPG+ K+EVKVEVE+G +LQISGERS E EEKNDKWHRVERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAK+EE+KASMENGVL+VTVPKV EKKPE+KSI+ISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Lsi04G009310 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.8e-64
Identity = 121/159 (76.10%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           MS+IPS FGGRR+N+FDPFSLDVWDPF  F    S A+     +ET+AFVNT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           QAH+F ADLPG+ K+EVKVE+EEG+VLQISGER+KE+EEKNDKWHRVERSSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKV+EVKA+M NGV+TVTVPKVE KKPE+K+I+ISG
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of Lsi04G009310 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-63
Identity = 118/161 (73.29%), Postives = 142/161 (88.20%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSL--ANVPSSTRETSAFVNTRIDWKE 60
           MSLIP+ FGGRR N+FDPFSLDVWDPF  F F N+L  A+ P  +RE SAFV+TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRF 120
           TP+AH+F AD+PG+ K+EVKV++E+ +VLQISGER+ E+E+KND WHRVERSSGKF+RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           RLPENAKVE+VKASMENGVLTVTVPK E KKP++K+IEISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of Lsi04G009310 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-63
Identity = 120/160 (75.00%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDG-FSFSNSLANVPSSTRETSAFVNTRIDWKET 60
           MSLIPSIFGGRR+N+FDPFS D+WDPF+G F+ S++LAN  S+ R+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 61  PQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFR 120
           P+AH+F ADLPG+ K+EVKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKF+RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           LPENAK+EEVKA+MENGVLTV VPK  EKKP++KSI+ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Lsi04G009310 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.9e-63
Identity = 118/159 (74.21%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           MSLIPS FGGRR+N+FDPFSLDVWDPF  F F+NS  +  S  RE SAFV+TR+DWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSA-SFPRENSAFVSTRVDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           +AH+F ADLPG+ K+EVKVE+E+ RVLQISGERS E+E+KND+WHR+ERSSGKF+RRFRL
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAK+++VKA+MENGVLTVTVPK E KKPE+K+I+ISG
Sbjct: 121 PENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of Lsi04G009310 vs. ExPASy TrEMBL
Match: A0A5A7UAZ9 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00300 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 143/159 (89.94%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           M+LIP+IFGGRR+N+FDPFSLD+WDPF+GF FSNSLAN+PSS R+TSAF NTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           QAHIF ADLPGINK+EVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENGVLTVTVPK+EEKKPEIKSI+ISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009310 vs. ExPASy TrEMBL
Match: A0A5A7T3F7 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00190 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.6e-75
Identity = 144/159 (90.57%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           M+LIPSIF GRR+N+FDPFSLD+WDPF+GF FSNSLAN+PSS RETSAF NTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           QAHIF ADLPGINK+EVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENGVLTVTVPK+EEKKPEIKSI+ISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009310 vs. ExPASy TrEMBL
Match: A0A5D3BEM2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G001020 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.4e-75
Identity = 142/159 (89.31%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           M+LIPSIFGGRR+N+FDPFSLD+WDPF+GFSFSNSLAN+PSS RETSAF NTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           QAHIF ADLPGI K+EVKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKA+MENGVLTVTVPK+EEKKPEIKSI+I+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lsi04G009310 vs. ExPASy TrEMBL
Match: A0A1S3CIN2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.4e-75
Identity = 142/159 (89.31%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           M+LIPSIFGGRR+N+FDPFSLD+WDPF+GFSFSNSLAN+PSS RETSAF NTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           QAHIF ADLPGI K+EVKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKA+MENGVLTVTVPK+EEKKPEIKSI+I+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lsi04G009310 vs. ExPASy TrEMBL
Match: A0A5D3DH18 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75208G00010 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.8e-75
Identity = 145/159 (91.19%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           MSLIPSIFGGRR+N+FDPFSLD+WDPF+GF FSNSLANVPSS  ETSAF NTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           QAHIF ADLPGI K+EVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKA+MENGVLTVTVPKVEEKKPEIKSI+ISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009310 vs. NCBI nr
Match: XP_038892388.1 (17.8 kDa class I heat shock protein-like [Benincasa hispida] >XP_038892768.1 17.8 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 297.7 bits (761), Expect = 5.8e-77
Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           MSLIPS FGGR++NIFDPFSLDVWDPFDGFSFSNSLANVPSS RETSAF NTRIDWKETP
Sbjct: 1   MSLIPSFFGGRKSNIFDPFSLDVWDPFDGFSFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
            AHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  HAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENG+LTVTVPKVE+KKP+IKSIEISG
Sbjct: 121 PENAKVEEVKASMENGLLTVTVPKVEQKKPDIKSIEISG 159

[Close]

BLAST of Lsi04G009310 vs. NCBI nr
Match: XP_038891783.1 (17.8 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 296.2 bits (757), Expect = 1.7e-76
Identity = 147/159 (92.45%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           MSLIPS FGGR++NIFDPFSLDVWDPFDGFSFSNSLANVPSS RETSAF NTRIDWKETP
Sbjct: 1   MSLIPSFFGGRKSNIFDPFSLDVWDPFDGFSFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
            AHIFTADLPGINK+EVKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  HAHIFTADLPGINKREVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENG+LTVTVPKVE+KKP+IKSIEISG
Sbjct: 121 PENAKVEEVKASMENGLLTVTVPKVEQKKPDIKSIEISG 159

[Close]

BLAST of Lsi04G009310 vs. NCBI nr
Match: KAA0051547.1 (17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 143/159 (89.94%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           M+LIP+IFGGRR+N+FDPFSLD+WDPF+GF FSNSLAN+PSS R+TSAF NTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           QAHIF ADLPGINK+EVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENGVLTVTVPK+EEKKPEIKSI+ISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009310 vs. NCBI nr
Match: KAA0037328.1 (18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 5.4e-75
Identity = 144/159 (90.57%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           M+LIPSIF GRR+N+FDPFSLD+WDPF+GF FSNSLAN+PSS RETSAF NTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           QAHIF ADLPGINK+EVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENGVLTVTVPK+EEKKPEIKSI+ISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009310 vs. NCBI nr
Match: XP_008463198.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0037330.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97577.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 290.8 bits (743), Expect = 7.1e-75
Identity = 142/159 (89.31%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           M+LIPSIFGGRR+N+FDPFSLD+WDPF+GFSFSNSLAN+PSS RETSAF NTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           QAHIF ADLPGI K+EVKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKA+MENGVLTVTVPK+EEKKPEIKSI+I+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lsi04G009310 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 247.7 bits (631), Expect = 6.4e-66
Identity = 120/159 (75.47%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           MSLIPSIFGGRRTN+FDPFSLDV+DPF+GF   + LAN P+   + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPA--MDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           +AH+F ADLPG+ K+EVKVEVE+G +LQISGERS E EEKNDKWHRVERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAK+EE+KASMENGVL+VTVPKV EKKPE+KSI+ISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Lsi04G009310 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-64
Identity = 120/160 (75.00%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDG-FSFSNSLANVPSSTRETSAFVNTRIDWKET 60
           MSLIPSIFGGRR+N+FDPFS D+WDPF+G F+ S++LAN  S+ R+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 61  PQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFR 120
           P+AH+F ADLPG+ K+EVKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKF+RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           LPENAK+EEVKA+MENGVLTV VPK  EKKP++KSI+ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Lsi04G009310 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 241.5 bits (615), Expect = 4.6e-64
Identity = 115/159 (72.33%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MSLIPSIFGGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKETP 60
           MSL+PS FGGRRTN+FDPFSLDVWDPF+GF  +  L N P+  ++ +AF N ++DW+ETP
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAPA--KDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFRL 120
           +AH+F AD+PG+ K+EVKVEVE+G +LQISGERS E EEK+D WHRVERSSGKF+RRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENGVL+VTVPKV+E KPE+KS++ISG
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Lsi04G009310 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 210.7 bits (535), Expect = 8.7e-55
Identity = 107/160 (66.88%), Postives = 129/160 (80.62%), Query Frame = 0


Query: 1   MSLIPSIF-GGRRTNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKET 60
           MS+IPS F   RR+NIFDPFSLDVWDPF   + S       S +RE SA VN R+DW+ET
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSS-------SLSRENSAIVNARVDWRET 60

Query: 61  PQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRFR 120
           P+AH+F ADLPG+ K+EVKVE+EE  VL+ISGER  E+E+KND WHRVERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 121 LPENAKVEEVKASMENGVLTVTVPKVEEKKPEIKSIEISG 160
           LPEN K+++VKA+MENGVLTVTVPK E KK ++KSI+ISG
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of Lsi04G009310 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 6.2e-53
Identity = 107/163 (65.64%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 1   MSLIPSIFGGRR--TNIFDPFSLDVWDPFDGFSFSNSLANVPSSTRETSAFVNTRIDWKE 60
           MSLIPS FG  R   +IFDPFSLDVWDPF    F +SL+       ETSA  N R+DWKE
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG------ETSAITNARVDWKE 60

Query: 61  TPQAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFIRRF 120
           T +AH+F ADLPG+ K+EVKVE+E+  VL+ISGER  E+EEK D WHRVERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKVEE--KKPEIKSIEISG 160
           +LPEN K+++VKASMENGVLTVTVPKVEE  KK ++KSI+ISG
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of Lsi04G009310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13853	9.0e-65	75.47	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P27396	5.8e-64	76.10	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P05478	1.0e-63	73.29	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P19037	1.7e-63	75.00	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27880	2.9e-63	74.21	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]

BLAST of Lsi04G009310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UAZ9	2.0e-75	89.94	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T3F7	2.6e-75	90.57	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BEM2	3.4e-75	89.31	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CIN2	3.4e-75	89.31	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408...	[more]
A0A5D3DH18	5.8e-75	91.19	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Lsi04G009310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892388.1	5.8e-77	93.08	17.8 kDa class I heat shock protein-like [Benincasa hispida] >XP_038892768.1 17....	[more]
XP_038891783.1	1.7e-76	92.45	17.8 kDa class I heat shock protein-like [Benincasa hispida]	[more]
KAA0051547.1	4.2e-75	89.94	17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 ...	[more]
KAA0037328.1	5.4e-75	90.57	18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa]	[more]
XP_008463198.1	7.1e-75	89.31	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0037330.1...	[more]

BLAST of Lsi04G009310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53540.1	6.4e-66	75.47	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	1.2e-64	75.00	heat shock protein 18.2	[more]
AT3G46230.1	4.6e-64	72.33	heat shock protein 17.4	[more]
AT2G29500.1	8.7e-55	66.88	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	6.2e-53	65.64	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..159 e-value: 1.5E-52 score: 179.3
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 27..159
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 55..158 e-value: 5.0E-30 score: 103.7
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 45..159 score: 31.454849
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..159
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 53..144 e-value: 6.03453E-56 score: 168.637
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..159
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 49..156 score: 8.560278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G009310.1	Lsi04G009310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding