Lsi04G003760 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G003760
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Heparanase, putative
Location	chr04: 3721948 .. 3722756 (+)
RNA-Seq Expression	Lsi04G003760
Synteny	Lsi04G003760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCATTAATTTAATTTAATTGTATTTATGTTTTTGATTGATTAAGGTATTTGGATCAATTGGGGATGACTGCCACATTCAATCATCAGGTTTATTGCAGACAAGCCTTGATTGGTGGAAACTATGCTTTGCTTAATACCACTACTTTCATCCCTAACCCTGATTATTATAGGTCAGTAATTCTAATTAATTTTTTTAAAAAAAAATTGAAATATCCCAATAATTATATTCAGTAACTAAATATTGTTTGGTTGGAAACAGCGCTCTGTTATGGCACAGATTAATGGGAAAGAAGGTCCTCTCAGCATCCCACGACAGCTCTCCATACCTTCGTGTTTATTCTCACTGCACCAAAAACAACGTAATTAACTCAAAAACATTTCTCTTATATTAATAATTAAAAAAAAAAACATGTTTTTTTTTATTGTATTTAATTTTATACTAATGTTTATTATTATTATTATTATTATTGAATTGTTTTCAGGAAGGCGTTACATTGCTTCTAATTAACATGTCAAATTCGACAACATTTGATGTAAATATTGTTAACGATAGAAATATTTATCCAAATTTCGTAAGCAGCAGCAAATTAAAAGCAAGAGAAGAATACCATTTAACTCCTAAAGACGGCAATATTCAAAGCGACGTTATGCTTTTAAATGGAACTCCTCTTCAACTTACTCCAACGTTGGACATTCCCGACATGTCGCCCAAGCTCGTCGATCCCACTTCCGGTGTGTCGGTTGCCCCTGATTCTTACGTCTTTGTCTCCATCAAAGACTTCAAAGCTTCTGCTTGCGCTTAA

mRNA sequence

ATGGAGTATTTGGATCAATTGGGGATGACTGCCACATTCAATCATCAGGTTTATTGCAGACAAGCCTTGATTGGTGGAAACTATGCTTTGCTTAATACCACTACTTTCATCCCTAACCCTGATTATTATAGCGCTCTGTTATGGCACAGATTAATGGGAAAGAAGGTCCTCTCAGCATCCCACGACAGCTCTCCATACCTTCGTGTTTATTCTCACTGCACCAAAAACAACGAAGGCGTTACATTGCTTCTAATTAACATGTCAAATTCGACAACATTTGATGTAAATATTGTTAACGATAGAAATATTTATCCAAATTTCGTAAGCAGCAGCAAATTAAAAGCAAGAGAAGAATACCATTTAACTCCTAAAGACGGCAATATTCAAAGCGACGTTATGCTTTTAAATGGAACTCCTCTTCAACTTACTCCAACGTTGGACATTCCCGACATGTCGCCCAAGCTCGTCGATCCCACTTCCGGTGTGTCGGTTGCCCCTGATTCTTACGTCTTTGTCTCCATCAAAGACTTCAAAGCTTCTGCTTGCGCTTAA

Coding sequence (CDS)

ATGGAGTATTTGGATCAATTGGGGATGACTGCCACATTCAATCATCAGGTTTATTGCAGACAAGCCTTGATTGGTGGAAACTATGCTTTGCTTAATACCACTACTTTCATCCCTAACCCTGATTATTATAGCGCTCTGTTATGGCACAGATTAATGGGAAAGAAGGTCCTCTCAGCATCCCACGACAGCTCTCCATACCTTCGTGTTTATTCTCACTGCACCAAAAACAACGAAGGCGTTACATTGCTTCTAATTAACATGTCAAATTCGACAACATTTGATGTAAATATTGTTAACGATAGAAATATTTATCCAAATTTCGTAAGCAGCAGCAAATTAAAAGCAAGAGAAGAATACCATTTAACTCCTAAAGACGGCAATATTCAAAGCGACGTTATGCTTTTAAATGGAACTCCTCTTCAACTTACTCCAACGTTGGACATTCCCGACATGTCGCCCAAGCTCGTCGATCCCACTTCCGGTGTGTCGGTTGCCCCTGATTCTTACGTCTTTGTCTCCATCAAAGACTTCAAAGCTTCTGCTTGCGCTTAA

Protein sequence

MEYLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHDSSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLTPKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASACA

Homology

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BLAST of Lsi04G003760 vs. ExPASy Swiss-Prot
Match: Q9FF10 (Heparanase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g07830 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-46
Identity = 101/202 (50.00%), Postives = 126/202 (62.38%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLDQLGM+A  N +VYCRQ L+GG Y LL   TF+PNPDYYSALLWHRLMGK VL+   D
Sbjct: 342 YLDQLGMSARHNTKVYCRQTLVGGFYGLLEKGTFVPNPDYYSALLWHRLMGKGVLAVQTD 401

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSK------LKA- 122
             P LRVY+HC+K   GVTLLLIN+SN + F V++ N  N+  N  S  K      LK  
Sbjct: 402 GPPQLRVYAHCSKGRAGVTLLLINLSNQSDFTVSVSNGINVVLNAESRKKKSLLDTLKRP 461

Query: 123 --------------REEYHLTPKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSG 182
                         REEYHLTP++G ++S  M+LNG  L+ T T DIP + P L    S 
Sbjct: 462 FSWIGSKASDGYLNREEYHLTPENGVLRSKTMVLNGKSLKPTATGDIPSLEPVLRSVNSP 521

Query: 183 VSVAPDSYVFVSIKDFKASACA 184
           ++V P S  F+ + +F ASAC+
Sbjct: 522 LNVLPLSMSFIVLPNFDASACS 543

[Close]

BLAST of Lsi04G003760 vs. ExPASy Swiss-Prot
Match: Q8L608 (Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-43
Identity = 95/202 (47.03%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLDQLG+++  N +VYCRQAL+GG Y LL   TF+PNPDYYSALLWHRLMGK +L     
Sbjct: 338 YLDQLGISSKHNTKVYCRQALVGGFYGLLEKETFVPNPDYYSALLWHRLMGKGILGVQTT 397

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIY--------PNFVSSSKLK 122
           +S YLR Y HC+K   G+T+LLIN+S  TTF V + N   +          +F+ + K K
Sbjct: 398 ASEYLRAYVHCSKRRAGITILLINLSKHTTFTVAVSNGVKVVLQAESMKRKSFLETIKSK 457

Query: 123 A-------------REEYHLTPKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSG 182
                         REEYHL+PKDG+++S +MLLNG PL  T T DIP + P      S 
Sbjct: 458 VSWVGNKASDGYLNREEYHLSPKDGDLRSKIMLLNGKPLVPTATGDIPKLEPVRHGVKSP 517

Query: 183 VSVAPDSYVFVSIKDFKASACA 184
           V + P S  F+ +  F A AC+
Sbjct: 518 VYINPLSISFIVLPTFDAPACS 539

[Close]

BLAST of Lsi04G003760 vs. ExPASy Swiss-Prot
Match: Q9FZP1 (Heparanase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g34940 PE=2 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 3.6e-41
Identity = 85/196 (43.37%), Postives = 120/196 (61.22%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLDQLGM + ++ + YCRQ+LIGGNY LLNTT F PNPDYYSAL+W +LMG+K L  +  
Sbjct: 341 YLDQLGMASLYDTKTYCRQSLIGGNYGLLNTTNFTPNPDYYSALIWRQLMGRKALFTTFS 400

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTT----------FDVNIVNDRNIYPN-----F 122
            +  +R Y+HC + ++G+T+LL+N+ N+TT          F +        Y       F
Sbjct: 401 GTKKIRSYTHCARQSKGITVLLMNLDNTTTVVAKVELNNSFSLRHTKHMKSYKRASSQLF 460

Query: 123 VSSSKLKAREEYHLTPKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPD 182
              + +  REEYHLT KDGN+ S  MLLNG  LQ+    D+P + P  ++ T  +++AP 
Sbjct: 461 GGPNGVIQREEYHLTAKDGNLHSQTMLLNGNALQVNSMGDLPPIEPIHINSTEPITIAPY 520

Query: 183 SYVFVSIKDFKASACA 184
           S VFV +++    ACA
Sbjct: 521 SIVFVHMRNVVVPACA 536

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BLAST of Lsi04G003760 vs. ExPASy Swiss-Prot
Match: Q9LRC8 (Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis OX=65409 GN=SGUS PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33
Identity = 74/172 (43.02%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YL+ LG +A  + + +CRQ L GGNY LL T T+IPNPDYYSALLWHRLMG KVL     
Sbjct: 351 YLNMLGYSALLDTKTFCRQTLTGGNYGLLQTGTYIPNPDYYSALLWHRLMGSKVLKTEIV 410

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
            +  + +Y+HC K + G+T+L++N    ++  +++  D + Y +         REEYHLT
Sbjct: 411 GTKNVYIYAHCAKKSNGITMLVLNHDGESSVKISL--DPSKYGS--------KREEYHLT 470

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSI 175
           P + N+QS ++ LNG  L L P+  IP ++P   D +  + VAP S++FV +
Sbjct: 471 PVNNNLQSRLVKLNGELLHLDPSGVIPALNPVEKDNSKQLEVAPYSFMFVHL 512

[Close]

BLAST of Lsi04G003760 vs. ExPASy Swiss-Prot
Match: Q9MYY0 (Heparanase OS=Bos taurus OX=9913 GN=HPSE PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 65/192 (33.85%), Postives = 102/192 (53.12%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIG-GNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSAS- 62
           +LD+LG++A    +V  RQ L G GNY L++   F P PDY+ +LL+ +L+G KVL AS 
Sbjct: 367 WLDKLGLSARMGIEVVMRQVLFGAGNYHLVD-GNFEPLPDYWLSLLFKKLVGNKVLMASV 426

Query: 63  --HDSSPYLRVYSHCT-----KNNEG-VTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSK 122
              D S + RVY HCT     +  EG +TL  +N+ N        V      P+ + + +
Sbjct: 427 KGPDRSKF-RVYLHCTNTKHPRYKEGDLTLYALNLHN--------VTKHLELPHHLFNKQ 486

Query: 123 LKAREEYHLTPK--DGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYV 182
           +   ++Y + P   DG +   V  LNG  L++     +P ++ K + P S + + P SY 
Sbjct: 487 V---DKYLIKPSGTDGLLSKSVQ-LNGQILKMVDEQTLPALTEKPLHPGSSLGMPPFSYG 544

[Close]

BLAST of Lsi04G003760 vs. ExPASy TrEMBL
Match: A0A5A7SZC5 (Heparanase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G004670 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.3e-88
Identity = 165/181 (91.16%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLD LGMTA+F+HQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVL+ASHD
Sbjct: 398 YLDNLGMTASFDHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLAASHD 457

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
           SSPYLRVYSHCTKN EGVT+LLIN+SNSTT DV IVNDRNIYPNFV  SKLKAREEYHLT
Sbjct: 458 SSPYLRVYSHCTKNEEGVTVLLINLSNSTTHDVKIVNDRNIYPNFV-GSKLKAREEYHLT 517

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASAC 182
           PKDG+IQSDVMLLNGTPLQLTPTLDIP MSPKLVDPTS V+VAP SYVFVSIKDFKASAC
Sbjct: 518 PKDGDIQSDVMLLNGTPLQLTPTLDIPKMSPKLVDPTSVVTVAPSSYVFVSIKDFKASAC 577

Query: 183 A 184
           A
Sbjct: 578 A 577

[Close]

BLAST of Lsi04G003760 vs. ExPASy TrEMBL
Match: A0A5D3CBY1 (Heparanase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00010 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.3e-88
Identity = 165/181 (91.16%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLD LGMTA+F+HQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVL+ASHD
Sbjct: 209 YLDNLGMTASFDHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLAASHD 268

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
           SSPYLRVYSHCTKN EGVT+LLIN+SNSTT DV IVNDRNIYPNFV  SKLKAREEYHLT
Sbjct: 269 SSPYLRVYSHCTKNEEGVTVLLINLSNSTTHDVKIVNDRNIYPNFV-GSKLKAREEYHLT 328

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASAC 182
           PKDG+IQSDVMLLNGTPLQLTPTLDIP MSPKLVDPTS V+VAP SYVFVSIKDFKASAC
Sbjct: 329 PKDGDIQSDVMLLNGTPLQLTPTLDIPKMSPKLVDPTSVVTVAPSSYVFVSIKDFKASAC 388

Query: 183 A 184
           A
Sbjct: 389 A 388

[Close]

BLAST of Lsi04G003760 vs. ExPASy TrEMBL
Match: A0A1S3BEI8 (heparanase-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103489169 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.3e-88
Identity = 165/181 (91.16%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLD LGMTA+F+HQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVL+ASHD
Sbjct: 338 YLDNLGMTASFDHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLAASHD 397

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
           SSPYLRVYSHCTKN EGVT+LLIN+SNSTT DV IVNDRNIYPNFV  SKLKAREEYHLT
Sbjct: 398 SSPYLRVYSHCTKNEEGVTVLLINLSNSTTHDVKIVNDRNIYPNFV-GSKLKAREEYHLT 457

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASAC 182
           PKDG+IQSDVMLLNGTPLQLTPTLDIP MSPKLVDPTS V+VAP SYVFVSIKDFKASAC
Sbjct: 458 PKDGDIQSDVMLLNGTPLQLTPTLDIPKMSPKLVDPTSVVTVAPSSYVFVSIKDFKASAC 517

Query: 183 A 184
           A
Sbjct: 518 A 517

[Close]

BLAST of Lsi04G003760 vs. ExPASy TrEMBL
Match: A0A0A0KQS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606560 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.9e-86
Identity = 161/181 (88.95%), Postives = 170/181 (93.92%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLD LGMTA+F+HQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVL+ASHD
Sbjct: 338 YLDNLGMTASFDHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLAASHD 397

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
           SSPYLRVYSHCT+N+EGVT+LLIN+SNSTT DV IVNDRNIYPNFV   KLKAREEYHLT
Sbjct: 398 SSPYLRVYSHCTRNDEGVTVLLINLSNSTTHDVKIVNDRNIYPNFV-GKKLKAREEYHLT 457

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASAC 182
           PKDG+IQSDVMLLNGTPLQLTP L+IP M PKLVDPTS VSVAP SYVFVSIKDFKASAC
Sbjct: 458 PKDGDIQSDVMLLNGTPLQLTPMLEIPKMKPKLVDPTSAVSVAPHSYVFVSIKDFKASAC 517

Query: 183 A 184
           A
Sbjct: 518 A 517

[Close]

BLAST of Lsi04G003760 vs. ExPASy TrEMBL
Match: A0A6J1DCI6 (heparanase-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019094 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.1e-84
Identity = 153/181 (84.53%), Postives = 168/181 (92.82%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLDQLGMTAT+NH  YCRQALIGGNYALLNTTTFIPNPDYY ALLWHRLMGKKVLS SHD
Sbjct: 339 YLDQLGMTATYNHHAYCRQALIGGNYALLNTTTFIPNPDYYGALLWHRLMGKKVLSVSHD 398

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
            SPYLRVYSHC+KN  G+T+LLINMSNSTTFDVNIVNDR +YP+  +  +LKAREEYHL+
Sbjct: 399 GSPYLRVYSHCSKNRSGITVLLINMSNSTTFDVNIVNDRKLYPS-CNGGRLKAREEYHLS 458

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASAC 182
           PKDG+IQSDV+LLNGTPL+LTPTLDIPDMSPKLVDPTS VSV+PDSYVFV+IKDF+ASAC
Sbjct: 459 PKDGDIQSDVVLLNGTPLRLTPTLDIPDMSPKLVDPTSDVSVSPDSYVFVTIKDFRASAC 518

Query: 183 A 184
           A
Sbjct: 519 A 518

[Close]

BLAST of Lsi04G003760 vs. NCBI nr
Match: XP_038893314.1 (heparanase-like protein 1 [Benincasa hispida])

HSP 1 Score: 350.5 bits (898), Expect = 8.7e-93
Identity = 171/181 (94.48%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLDQLGMTATFNHQVYCRQALIGGNYALLNTT+FIPNPDYYSALLWHRLMGKKVL ASHD
Sbjct: 341 YLDQLGMTATFNHQVYCRQALIGGNYALLNTTSFIPNPDYYSALLWHRLMGKKVLLASHD 400

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
           SSPYLRVYSHCTKNNEGVT++LINMSNSTTFDVNIVNDRN+YPNF+  SKLKAREEYHLT
Sbjct: 401 SSPYLRVYSHCTKNNEGVTVVLINMSNSTTFDVNIVNDRNVYPNFI-GSKLKAREEYHLT 460

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASAC 182
           PKDGNIQSDVMLLNG+PLQLTPTLDIPDMSPKLVDPTS VSVAPDSYVFVSIKDFKASAC
Sbjct: 461 PKDGNIQSDVMLLNGSPLQLTPTLDIPDMSPKLVDPTSAVSVAPDSYVFVSIKDFKASAC 520

Query: 183 A 184
           A
Sbjct: 521 A 520

[Close]

BLAST of Lsi04G003760 vs. NCBI nr
Match: TYK09015.1 (heparanase-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 165/181 (91.16%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLD LGMTA+F+HQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVL+ASHD
Sbjct: 209 YLDNLGMTASFDHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLAASHD 268

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
           SSPYLRVYSHCTKN EGVT+LLIN+SNSTT DV IVNDRNIYPNFV  SKLKAREEYHLT
Sbjct: 269 SSPYLRVYSHCTKNEEGVTVLLINLSNSTTHDVKIVNDRNIYPNFV-GSKLKAREEYHLT 328

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASAC 182
           PKDG+IQSDVMLLNGTPLQLTPTLDIP MSPKLVDPTS V+VAP SYVFVSIKDFKASAC
Sbjct: 329 PKDGDIQSDVMLLNGTPLQLTPTLDIPKMSPKLVDPTSVVTVAPSSYVFVSIKDFKASAC 388

Query: 183 A 184
           A
Sbjct: 389 A 388

[Close]

BLAST of Lsi04G003760 vs. NCBI nr
Match: KAA0034459.1 (heparanase-like protein 1 [Cucumis melo var. makuwa] >KAA0034460.1 heparanase-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 165/181 (91.16%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLD LGMTA+F+HQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVL+ASHD
Sbjct: 398 YLDNLGMTASFDHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLAASHD 457

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
           SSPYLRVYSHCTKN EGVT+LLIN+SNSTT DV IVNDRNIYPNFV  SKLKAREEYHLT
Sbjct: 458 SSPYLRVYSHCTKNEEGVTVLLINLSNSTTHDVKIVNDRNIYPNFV-GSKLKAREEYHLT 517

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASAC 182
           PKDG+IQSDVMLLNGTPLQLTPTLDIP MSPKLVDPTS V+VAP SYVFVSIKDFKASAC
Sbjct: 518 PKDGDIQSDVMLLNGTPLQLTPTLDIPKMSPKLVDPTSVVTVAPSSYVFVSIKDFKASAC 577

Query: 183 A 184
           A
Sbjct: 578 A 577

[Close]

BLAST of Lsi04G003760 vs. NCBI nr
Match: XP_008446419.1 (PREDICTED: heparanase-like protein 1 [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 165/181 (91.16%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLD LGMTA+F+HQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVL+ASHD
Sbjct: 338 YLDNLGMTASFDHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLAASHD 397

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
           SSPYLRVYSHCTKN EGVT+LLIN+SNSTT DV IVNDRNIYPNFV  SKLKAREEYHLT
Sbjct: 398 SSPYLRVYSHCTKNEEGVTVLLINLSNSTTHDVKIVNDRNIYPNFV-GSKLKAREEYHLT 457

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASAC 182
           PKDG+IQSDVMLLNGTPLQLTPTLDIP MSPKLVDPTS V+VAP SYVFVSIKDFKASAC
Sbjct: 458 PKDGDIQSDVMLLNGTPLQLTPTLDIPKMSPKLVDPTSVVTVAPSSYVFVSIKDFKASAC 517

Query: 183 A 184
           A
Sbjct: 518 A 517

[Close]

BLAST of Lsi04G003760 vs. NCBI nr
Match: XP_011656257.2 (heparanase-like protein 1 [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 6.0e-86
Identity = 161/181 (88.95%), Postives = 170/181 (93.92%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLD LGMTA+F+HQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVL+ASHD
Sbjct: 338 YLDNLGMTASFDHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLAASHD 397

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSKLKAREEYHLT 122
           SSPYLRVYSHCT+N+EGVT+LLIN+SNSTT DV IVNDRNIYPNFV   KLKAREEYHLT
Sbjct: 398 SSPYLRVYSHCTRNDEGVTVLLINLSNSTTHDVKIVNDRNIYPNFV-GKKLKAREEYHLT 457

Query: 123 PKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPDSYVFVSIKDFKASAC 182
           PKDG+IQSDVMLLNGTPLQLTP L+IP M PKLVDPTS VSVAP SYVFVSIKDFKASAC
Sbjct: 458 PKDGDIQSDVMLLNGTPLQLTPMLEIPKMKPKLVDPTSAVSVAPHSYVFVSIKDFKASAC 517

Query: 183 A 184
           A
Sbjct: 518 A 517

[Close]

BLAST of Lsi04G003760 vs. TAIR 10
Match: AT5G07830.1 (glucuronidase 2 )

HSP 1 Score: 184.9 bits (468), Expect = 5.9e-47
Identity = 101/202 (50.00%), Postives = 126/202 (62.38%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLDQLGM+A  N +VYCRQ L+GG Y LL   TF+PNPDYYSALLWHRLMGK VL+   D
Sbjct: 342 YLDQLGMSARHNTKVYCRQTLVGGFYGLLEKGTFVPNPDYYSALLWHRLMGKGVLAVQTD 401

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIYPNFVSSSK------LKA- 122
             P LRVY+HC+K   GVTLLLIN+SN + F V++ N  N+  N  S  K      LK  
Sbjct: 402 GPPQLRVYAHCSKGRAGVTLLLINLSNQSDFTVSVSNGINVVLNAESRKKKSLLDTLKRP 461

Query: 123 --------------REEYHLTPKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSG 182
                         REEYHLTP++G ++S  M+LNG  L+ T T DIP + P L    S 
Sbjct: 462 FSWIGSKASDGYLNREEYHLTPENGVLRSKTMVLNGKSLKPTATGDIPSLEPVLRSVNSP 521

Query: 183 VSVAPDSYVFVSIKDFKASACA 184
           ++V P S  F+ + +F ASAC+
Sbjct: 522 LNVLPLSMSFIVLPNFDASACS 543

[Close]

BLAST of Lsi04G003760 vs. TAIR 10
Match: AT5G61250.2 (glucuronidase 1 )

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-44
Identity = 95/202 (47.03%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLDQLG+++  N +VYCRQAL+GG Y LL   TF+PNPDYYSALLWHRLMGK +L     
Sbjct: 338 YLDQLGISSKHNTKVYCRQALVGGFYGLLEKETFVPNPDYYSALLWHRLMGKGILGVQTT 397

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIY--------PNFVSSSKLK 122
           +S YLR Y HC+K   G+T+LLIN+S  TTF V + N   +          +F+ + K K
Sbjct: 398 ASEYLRAYVHCSKRRAGITILLINLSKHTTFTVAVSNGVKVVLQAESMKRKSFLETIKSK 457

Query: 123 A-------------REEYHLTPKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSG 182
                         REEYHL+PKDG+++S +MLLNG PL  T T DIP + P      S 
Sbjct: 458 VSWVGNKASDGYLNREEYHLSPKDGDLRSKIMLLNGKPLVPTATGDIPKLEPVRHGVKSP 517

Query: 183 VSVAPDSYVFVSIKDFKASACA 184
           V + P S  F+ +  F A AC+
Sbjct: 518 VYINPLSISFIVLPTFDAPACS 539

[Close]

BLAST of Lsi04G003760 vs. TAIR 10
Match: AT5G61250.1 (glucuronidase 1 )

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-44
Identity = 95/202 (47.03%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLDQLG+++  N +VYCRQAL+GG Y LL   TF+PNPDYYSALLWHRLMGK +L     
Sbjct: 338 YLDQLGISSKHNTKVYCRQALVGGFYGLLEKETFVPNPDYYSALLWHRLMGKGILGVQTT 397

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTTFDVNIVNDRNIY--------PNFVSSSKLK 122
           +S YLR Y HC+K   G+T+LLIN+S  TTF V + N   +          +F+ + K K
Sbjct: 398 ASEYLRAYVHCSKRRAGITILLINLSKHTTFTVAVSNGVKVVLQAESMKRKSFLETIKSK 457

Query: 123 A-------------REEYHLTPKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSG 182
                         REEYHL+PKDG+++S +MLLNG PL  T T DIP + P      S 
Sbjct: 458 VSWVGNKASDGYLNREEYHLSPKDGDLRSKIMLLNGKPLVPTATGDIPKLEPVRHGVKSP 517

Query: 183 VSVAPDSYVFVSIKDFKASACA 184
           V + P S  F+ +  F A AC+
Sbjct: 518 VYINPLSISFIVLPTFDAPACS 539

[Close]

BLAST of Lsi04G003760 vs. TAIR 10
Match: AT5G34940.1 (glucuronidase 3 )

HSP 1 Score: 169.5 bits (428), Expect = 2.6e-42
Identity = 85/196 (43.37%), Postives = 120/196 (61.22%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLDQLGM + ++ + YCRQ+LIGGNY LLNTT F PNPDYYSAL+W +LMG+K L  +  
Sbjct: 206 YLDQLGMASLYDTKTYCRQSLIGGNYGLLNTTNFTPNPDYYSALIWRQLMGRKALFTTFS 265

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTT----------FDVNIVNDRNIYPN-----F 122
            +  +R Y+HC + ++G+T+LL+N+ N+TT          F +        Y       F
Sbjct: 266 GTKKIRSYTHCARQSKGITVLLMNLDNTTTVVAKVELNNSFSLRHTKHMKSYKRASSQLF 325

Query: 123 VSSSKLKAREEYHLTPKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPD 182
              + +  REEYHLT KDGN+ S  MLLNG  LQ+    D+P + P  ++ T  +++AP 
Sbjct: 326 GGPNGVIQREEYHLTAKDGNLHSQTMLLNGNALQVNSMGDLPPIEPIHINSTEPITIAPY 385

Query: 183 SYVFVSIKDFKASACA 184
           S VFV +++    ACA
Sbjct: 386 SIVFVHMRNVVVPACA 401

[Close]

BLAST of Lsi04G003760 vs. TAIR 10
Match: AT5G34940.2 (glucuronidase 3 )

HSP 1 Score: 169.5 bits (428), Expect = 2.6e-42
Identity = 85/196 (43.37%), Postives = 120/196 (61.22%), Query Frame = 0


Query: 3   YLDQLGMTATFNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLSASHD 62
           YLDQLGM + ++ + YCRQ+LIGGNY LLNTT F PNPDYYSAL+W +LMG+K L  +  
Sbjct: 341 YLDQLGMASLYDTKTYCRQSLIGGNYGLLNTTNFTPNPDYYSALIWRQLMGRKALFTTFS 400

Query: 63  SSPYLRVYSHCTKNNEGVTLLLINMSNSTT----------FDVNIVNDRNIYPN-----F 122
            +  +R Y+HC + ++G+T+LL+N+ N+TT          F +        Y       F
Sbjct: 401 GTKKIRSYTHCARQSKGITVLLMNLDNTTTVVAKVELNNSFSLRHTKHMKSYKRASSQLF 460

Query: 123 VSSSKLKAREEYHLTPKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSGVSVAPD 182
              + +  REEYHLT KDGN+ S  MLLNG  LQ+    D+P + P  ++ T  +++AP 
Sbjct: 461 GGPNGVIQREEYHLTAKDGNLHSQTMLLNGNALQVNSMGDLPPIEPIHINSTEPITIAPY 520

Query: 183 SYVFVSIKDFKASACA 184
           S VFV +++    ACA
Sbjct: 521 SIVFVHMRNVVVPACA 536

The following BLAST results are available for this feature:

BLAST of Lsi04G003760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FF10	8.3e-46	50.00	Heparanase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g07830 PE=2 SV=1	[more]
Q8L608	1.7e-43	47.03	Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1	[more]
Q9FZP1	3.6e-41	43.37	Heparanase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g34940 PE=2 SV=2	[more]
Q9LRC8	1.2e-33	43.02	Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis OX=65409 GN=SGUS PE=1 S...	[more]
Q9MYY0	1.4e-13	33.85	Heparanase OS=Bos taurus OX=9913 GN=HPSE PE=2 SV=2	[more]

BLAST of Lsi04G003760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZC5	5.3e-88	91.16	Heparanase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3CBY1	5.3e-88	91.16	Heparanase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BEI8	5.3e-88	91.16	heparanase-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103489169 PE=3 SV=1	[more]
A0A0A0KQS3	2.9e-86	88.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606560 PE=3 SV=1	[more]
A0A6J1DCI6	6.1e-84	84.53	heparanase-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019094 PE=3 SV...	[more]

BLAST of Lsi04G003760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893314.1	8.7e-93	94.48	heparanase-like protein 1 [Benincasa hispida]	[more]
TYK09015.1	1.1e-87	91.16	heparanase-like protein 1 [Cucumis melo var. makuwa]	[more]
KAA0034459.1	1.1e-87	91.16	heparanase-like protein 1 [Cucumis melo var. makuwa] >KAA0034460.1 heparanase-li...	[more]
XP_008446419.1	1.1e-87	91.16	PREDICTED: heparanase-like protein 1 [Cucumis melo]	[more]
XP_011656257.2	6.0e-86	88.95	heparanase-like protein 1 [Cucumis sativus]	[more]

BLAST of Lsi04G003760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07830.1	5.9e-47	50.00	glucuronidase 2	[more]
AT5G61250.2	1.2e-44	47.03	glucuronidase 1	[more]
AT5G61250.1	1.2e-44	47.03	glucuronidase 1	[more]
AT5G34940.1	2.6e-42	43.37	glucuronidase 3	[more]
AT5G34940.2	2.6e-42	43.37	glucuronidase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 1..50 e-value: 3.3E-7 score: 32.0
None	No IPR available	PANTHER	PTHR14363:SF13	OS07G0598400 PROTEIN	coord: 2..183
None	No IPR available	PANTHER	PTHR14363	HEPARANASE-RELATED	coord: 2..183
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 3..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G003760.1	Lsi04G003760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004566	beta-glucuronidase activity