Lsi03G021280 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G021280
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr03: 32460184 .. 32460868 (-)
RNA-Seq Expression	Lsi03G021280
Synteny	Lsi03G021280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTATGAATGATTTAAGGATAAAATTCACTTGGATTTTAAAGGATTAAAAGGTGGTTTTTTTTCTTCTTATTTTCATCGATCATGAAGAATTGTTCAAGGGTGAGAACTATATCTAATATGAATGTCTGGACATTATTAAAATGAAAAATCTGTGGACTACGCAGAAAAAAGAAACAAGTATTAGAATTGAATGCTGCTTGTTCCCATGTTTAACCTCAACCTCTGTTTCTTTTCTTCCTTAGCCATTTTCTTCTTCACTGTCCCCGCCGCATCTCAGAAGTTCTACTACGCCGGATTTCTCGCCGCCACCAACTTAACCCCTACCGGATATCGCGAAGATCGAGGAGAACGGGCTGTTAAAGCTCACAGACGACACCAAATGGATACAGGGCCACGTGTTGTACGAATCCCCTGTTCGTTCGATTCAAAAACTCCTCCAACGGCAAAGCTTTTTCGTTCTCCACAACTTTTGTCTTCGCCATCGTCTCCGAATACCCTAACCTTGCCAGCCATGGGCTCGCCTTCACTATTGCGCCCTCCAAAAACCTCCATGGACTTCCCTCTCGGTATTTAGGCCTTCTCAATGAGACGAATGACGGAAACCCCTCAAACCATTTATTTGCAATCTGGAGTTCGAGGACATCGACGACAACCACGTTGGAATCAATCTCGATAGTATGA

mRNA sequence

ATGCCCATTTTCTTCTTCACTGTCCCCGCCGCATCTCAGAAGTTCTACTACGCCGGATTTCTCGCCGCCACCAACTTAACCCCTACCGGATATCGCGAAGATCGAGGAGAACGGGCTGTTAAAGCTCACAGACGACACCAAATGGATACAGGGCCACGTGTTGTACGAATCCCCTGTTCGTTCGATTCAAAAACTCCTCCAACGGCAAAGCTTTTTCGTTCTCCACAACTTTTGTCTTCGCCATCGTCTCCGAATACCCTAACCTTGCCAGCCATGGGCTCGCCTTCACTATTGCGCCCTCCAAAAACCTCCATGGACTTCCCTCTCGGCCTTCTCAATGAGACGAATGACGGAAACCCCTCAAACCATTTATTTGCAATCTGGAGTTCGAGGACATCGACGACAACCACGTTGGAATCAATCTCGATAGTATGA

Coding sequence (CDS)

ATGCCCATTTTCTTCTTCACTGTCCCCGCCGCATCTCAGAAGTTCTACTACGCCGGATTTCTCGCCGCCACCAACTTAACCCCTACCGGATATCGCGAAGATCGAGGAGAACGGGCTGTTAAAGCTCACAGACGACACCAAATGGATACAGGGCCACGTGTTGTACGAATCCCCTGTTCGTTCGATTCAAAAACTCCTCCAACGGCAAAGCTTTTTCGTTCTCCACAACTTTTGTCTTCGCCATCGTCTCCGAATACCCTAACCTTGCCAGCCATGGGCTCGCCTTCACTATTGCGCCCTCCAAAAACCTCCATGGACTTCCCTCTCGGCCTTCTCAATGAGACGAATGACGGAAACCCCTCAAACCATTTATTTGCAATCTGGAGTTCGAGGACATCGACGACAACCACGTTGGAATCAATCTCGATAGTATGA

Protein sequence

MPIFFFTVPAASQKFYYAGFLAATNLTPTGYREDRGERAVKAHRRHQMDTGPRVVRIPCSFDSKTPPTAKLFRSPQLLSSPSSPNTLTLPAMGSPSLLRPPKTSMDFPLGLLNETNDGNPSNHLFAIWSSRTSTTTTLESISIV

Homology

The following BLAST results are available for this feature:

BLAST of Lsi03G021280 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G021280 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G021280 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G021280 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G021280.1	Lsi03G021280.1	mRNA