Lsi03G020700 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G020700
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSuppressor protein SRP40-like isoform X2
Locationchr03: 32008776 .. 32010007 (-)
RNA-Seq ExpressionLsi03G020700
SyntenyLsi03G020700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGCAATAAATGGATGTAATAAATGAGAAGGTTTAAACATGGAGGTAGATGAATCAGGTCAGAGTTACAAAACAGCTGCCACTTTTGCACAGTATCTCCAGCATCTGAAGAAGACAGATTTTCAAAAAAGTTCCTTCCCAAAAAAATAAAATTGTTAAAGAGTTCATCTTTCCACTTTTTCTGACTATTTGTATTCTAATCCAAGCAATTGTGCTCAGGCCAAGAAAATGGCACCCACTACCAAGGTGGACATCAAATGGAGGTCTCTCTCTCTCTCTTTCACTTTAAAATGTGAAGTGGGTTTGTTCTATCTATCTCTCTTTCTAAATTTTGATGCGGGTTTTGTATGGCAGTGGCAACAAGATGGAAGGTGGTGAAGTTTTGATAACAATGGAGTGCCTAAGAAGGAGATTACTAGCAGAGAGGCAAGCATCATTACTTGCCAAAGAAGAGGCAGAGCTCATGGGCAAAAGGGTATTACCAATGCCAAAACTCTCCTCATTTTTACCCTAATTTGAACTTGGTTCATTTTCCCTATTGTGTTCCTTTCAAGCATTTTATCGAACATGTTGCAGTCAACAGAATTAGAGAAGCAGATCACAAAGCAGATTCAAATGAAAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAAAGCTCGAATCACTTAACCTTTCTTCCACGATGGTGAACTCAGAGGCTTCAATTTCGTCGGAAATTCTCGACGAAGATGAACCGAAAACCCTAATCGAAGTTCCGCCTCTCAGAAGAAACTCGAAGGCCATTGGTGAAATTTCTCATTCGGAAGAAGAGAATCGAAATGCTTGTGGTTCTACAAGCTCGAACTCCTCTGCTTCTGAAATTTGCTCCGACGAACCTTTGAAAACAAAGATCGGAAATTGTGGAAAGGAGTTCGATTCCGTCGACGATTCACTTGCAATTGTTGCCGTGAACTGGCCGGAAAAATCAGAAACCGGCGATGAGTTGAATCCGGCGATCAGTGAAAGGATCATTGAAGTTCTTAATGATCTGAAGCACGCTCGAGAGAGAATTCAGAGATCAATGAAGATTTGTGAGCTTAACATGATTAAAGTCGGCCCAGTTTGAACTCAAATGTGTGTGAGAGAGAGATTGGATTTGGAAATGGGCCTGATTGAAAAGCCCATCAGACCCAGCCCACTTAAGACTTACAAAATGGATATTATTTCAAAATACCATTTTCGTCCCTA

mRNA sequence

AGAGCAATAAATGGATGTAATAAATGAGAAGGTTTAAACATGGAGGTAGATGAATCAGGTCAGAGTTACAAAACAGCTGCCACTTTTGCACAGTATCTCCAGCATCTGAAGAAGACAGATTTTCAAAAAAGTTCCTTCCCAAAAAAATAAAATTGTTAAAGAGTTCATCTTTCCACTTTTTCTGACTATTTGTATTCTAATCCAAGCAATTGTGCTCAGGCCAAGAAAATGGCACCCACTACCAAGGTGGACATCAAATGGAGTGGCAACAAGATGGAAGGTGGTGAAGTTTTGATAACAATGGAGTGCCTAAGAAGGAGATTACTAGCAGAGAGGCAAGCATCATTACTTGCCAAAGAAGAGGCAGAGCTCATGGGCAAAAGGTCAACAGAATTAGAGAAGCAGATCACAAAGCAGATTCAAATGAAAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAAAGCTCGAATCACTTAACCTTTCTTCCACGATGGTGAACTCAGAGGCTTCAATTTCGTCGGAAATTCTCGACGAAGATGAACCGAAAACCCTAATCGAAGTTCCGCCTCTCAGAAGAAACTCGAAGGCCATTGGTGAAATTTCTCATTCGGAAGAAGAGAATCGAAATGCTTGTGGTTCTACAAGCTCGAACTCCTCTGCTTCTGAAATTTGCTCCGACGAACCTTTGAAAACAAAGATCGGAAATTGTGGAAAGGAGTTCGATTCCGTCGACGATTCACTTGCAATTGTTGCCGTGAACTGGCCGGAAAAATCAGAAACCGGCGATGAGTTGAATCCGGCGATCAGTGAAAGGATCATTGAAGTTCTTAATGATCTGAAGCACGCTCGAGAGAGAATTCAGAGATCAATGAAGATTTGTGAGCTTAACATGATTAAAGTCGGCCCAGTTTGAACTCAAATGTGTGTGAGAGAGAGATTGGATTTGGAAATGGGCCTGATTGAAAAGCCCATCAGACCCAGCCCACTTAAGACTTACAAAATGGATATTATTTCAAAATACCATTTTCGTCCCTA

Coding sequence (CDS)

ATGGCACCCACTACCAAGGTGGACATCAAATGGAGTGGCAACAAGATGGAAGGTGGTGAAGTTTTGATAACAATGGAGTGCCTAAGAAGGAGATTACTAGCAGAGAGGCAAGCATCATTACTTGCCAAAGAAGAGGCAGAGCTCATGGGCAAAAGGTCAACAGAATTAGAGAAGCAGATCACAAAGCAGATTCAAATGAAAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAAAGCTCGAATCACTTAACCTTTCTTCCACGATGGTGAACTCAGAGGCTTCAATTTCGTCGGAAATTCTCGACGAAGATGAACCGAAAACCCTAATCGAAGTTCCGCCTCTCAGAAGAAACTCGAAGGCCATTGGTGAAATTTCTCATTCGGAAGAAGAGAATCGAAATGCTTGTGGTTCTACAAGCTCGAACTCCTCTGCTTCTGAAATTTGCTCCGACGAACCTTTGAAAACAAAGATCGGAAATTGTGGAAAGGAGTTCGATTCCGTCGACGATTCACTTGCAATTGTTGCCGTGAACTGGCCGGAAAAATCAGAAACCGGCGATGAGTTGAATCCGGCGATCAGTGAAAGGATCATTGAAGTTCTTAATGATCTGAAGCACGCTCGAGAGAGAATTCAGAGATCAATGAAGATTTGTGAGCTTAACATGATTAAAGTCGGCCCAGTTTGA

Protein sequence

MAPTTKVDIKWSGNKMEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNSKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNWPEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV
Homology
BLAST of Lsi03G020700 vs. ExPASy TrEMBL
Match: A0A1S3B6U8 (uncharacterized protein LOC103486426 OS=Cucumis melo OX=3656 GN=LOC103486426 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.0e-88
Identity = 191/230 (83.04%), Postives = 206/230 (89.57%), Query Frame = 0

Query: 1   MAPTTKVDIKWSGNKM-EGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQ 60
           M+P TK+DIKWSGNKM EGGEV  TMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQ
Sbjct: 67  MSPYTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQ 126

Query: 61  ITKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRN 120
           ITKQIQMK +AEKKLQLLKKKLESLNLSSTMVNSEASISSEI +EDEPKTLIEVPPL RN
Sbjct: 127 ITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRN 186

Query: 121 SKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVN 180
           SK I EISHSEEENRNA GST+SN SAS+I SDEP KTK G+CGKEFDSVDDSLAIVAV+
Sbjct: 187 SKGINEISHSEEENRNARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVD 246

Query: 181 WPEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
            PEKSETG++L P ISERIIEVLNDLK AR RIQ SM+ICE +MI+V PV
Sbjct: 247 SPEKSETGEQLKPVISERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 295

BLAST of Lsi03G020700 vs. ExPASy TrEMBL
Match: A0A0A0LDB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736620 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.8e-84
Identity = 183/230 (79.57%), Postives = 201/230 (87.39%), Query Frame = 0

Query: 1   MAPTTKVDIKWSGNKM-EGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQ 60
           MAP TK+DIKWSGNKM EGGEV  TMECLRRRLLAER ASLLAK+EAELM KRS+ELEKQ
Sbjct: 1   MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRSSELEKQ 60

Query: 61  ITKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRN 120
           ITKQIQMK +AEKKLQLLKKKLESLNLSSTMVNSEAS+SSEI +E+EPKT IEV PL  +
Sbjct: 61  ITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASVSSEICNENEPKTPIEVQPLPSH 120

Query: 121 SKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVN 180
           SK I EI HSEEENRNA GSTSSN SAS+I SD+P KTKIGNCGKE DSVDDSLAIVAV+
Sbjct: 121 SKGISEIFHSEEENRNARGSTSSNISASKIHSDKPSKTKIGNCGKEIDSVDDSLAIVAVD 180

Query: 181 WPEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
            P KSET ++L P ISERIIEVLNDLK ARERIQ SMK+C+ +MI+V P+
Sbjct: 181 SPAKSETFEQLKPVISERIIEVLNDLKRARERIQSSMKLCD-HMIEVSPI 229

BLAST of Lsi03G020700 vs. ExPASy TrEMBL
Match: A0A5A7TKN7 (Suppressor protein SRP40-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002050 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.7e-81
Identity = 178/214 (83.18%), Postives = 192/214 (89.72%), Query Frame = 0

Query: 16  MEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITKQIQMKTKAEKKLQ 75
           +EGGEV  TMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQITKQIQMK +AEKKLQ
Sbjct: 2   VEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQITKQIQMKARAEKKLQ 61

Query: 76  LLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNSKAIGEISHSEEENRN 135
           LLKKKLESLNLSSTMVNSEASISSEI +EDEPKTLIEVPPL RNSK I EISHSEEENRN
Sbjct: 62  LLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRNSKGINEISHSEEENRN 121

Query: 136 ACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNWPEKSETGDELNPAIS 195
           A GST+SN SAS+I SDEP KTK G+CGKEFDSVDDSLAIVAV+ PEKSETG++L P IS
Sbjct: 122 ARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVDSPEKSETGEQLKPVIS 181

Query: 196 ERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
           ERIIEVLNDLK AR RIQ SM+ICE +MI+V PV
Sbjct: 182 ERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 214

BLAST of Lsi03G020700 vs. ExPASy TrEMBL
Match: A0A6J1L305 (uncharacterized protein LOC111498645 OS=Cucurbita maxima OX=3661 GN=LOC111498645 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.3e-80
Identity = 178/229 (77.73%), Postives = 196/229 (85.59%), Query Frame = 0

Query: 1   MAPTTKVDIKWSGNKMEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60
           MA +TKVDIKWSGN MEG EVL TMECLRRRLLAERQASLLAKEEAELMGKRSTELEK+I
Sbjct: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60

Query: 61  TKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNS 120
           T+Q QM+TKAEKKLQLLKKKLESL+LS TM+NSE SISSEI DEDEPKTL     L  NS
Sbjct: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120

Query: 121 KAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNW 180
           + IGEISHS+EEN NA G+TSS+SS SEI S+E  K KI N G+EF+SVDDSLA VAVN 
Sbjct: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180

Query: 181 PEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
           PE++ETG E+   ISER+IEVLNDLK ARERIQRSMKICELNM+KV PV
Sbjct: 181 PEETETG-EMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of Lsi03G020700 vs. ExPASy TrEMBL
Match: A0A6J1CXG5 (uncharacterized protein LOC111015099 OS=Momordica charantia OX=3673 GN=LOC111015099 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.5e-71
Identity = 164/229 (71.62%), Postives = 181/229 (79.04%), Query Frame = 0

Query: 1   MAPTTKVDIKWSGNKMEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60
           MAP  K DIKWSGNKMEG EVL TMECLRRRLLAERQAS LAKE+AELM KRS ELEKQI
Sbjct: 1   MAPNAKEDIKWSGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQI 60

Query: 61  TKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNS 120
           T+QI M+TKAEKKL+LL+KKLESLNL ST V SE S+SSEI D ++PKTLI    L  N+
Sbjct: 61  TEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLITASSLPSNA 120

Query: 121 KAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNW 180
           +A GEISHSEE N NA G  + +SSASEIC D+  K KI N G EF S  DS A+VAVN 
Sbjct: 121 QATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGDSPAVVAVNS 180

Query: 181 PEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
           PE S+TG E  PAI+E IIEVLNDLKHARERIQ SM+I ELNMIKV PV
Sbjct: 181 PENSKTG-EWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 228

BLAST of Lsi03G020700 vs. NCBI nr
Match: XP_038906280.1 (uncharacterized protein LOC120092141 [Benincasa hispida])

HSP 1 Score: 354.8 bits (909), Expect = 5.8e-94
Identity = 200/229 (87.34%), Postives = 206/229 (89.96%), Query Frame = 0

Query: 1   MAPTTKVDIKWSGNKMEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60
           MAP    +IKWSGNKMEGGEV  TMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI
Sbjct: 15  MAP----NIKWSGNKMEGGEVSKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 74

Query: 61  TKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNS 120
           TKQIQMKTKAEKKLQLLKKKL SLNLS+TMVNSEAS+SSEI DEDEPKTLIEVP L  NS
Sbjct: 75  TKQIQMKTKAEKKLQLLKKKLGSLNLSTTMVNSEASVSSEICDEDEPKTLIEVPSLLSNS 134

Query: 121 KAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNW 180
           KAIGEISH EEENRNA GSTSSNSSASEICSDEP KTKIG C KEFDSVDDSLAIVAVN 
Sbjct: 135 KAIGEISHLEEENRNARGSTSSNSSASEICSDEPSKTKIGKCEKEFDSVDDSLAIVAVNS 194

Query: 181 PEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
           P KSETGDEL P ISERIIEVLNDLKHARE I+ SMKICE+NMI+V PV
Sbjct: 195 PGKSETGDELKPLISERIIEVLNDLKHARETIRSSMKICEVNMIEVSPV 239

BLAST of Lsi03G020700 vs. NCBI nr
Match: XP_008442604.2 (PREDICTED: uncharacterized protein LOC103486426 [Cucumis melo])

HSP 1 Score: 336.3 bits (861), Expect = 2.1e-88
Identity = 191/230 (83.04%), Postives = 206/230 (89.57%), Query Frame = 0

Query: 1   MAPTTKVDIKWSGNKM-EGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQ 60
           M+P TK+DIKWSGNKM EGGEV  TMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQ
Sbjct: 67  MSPYTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQ 126

Query: 61  ITKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRN 120
           ITKQIQMK +AEKKLQLLKKKLESLNLSSTMVNSEASISSEI +EDEPKTLIEVPPL RN
Sbjct: 127 ITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRN 186

Query: 121 SKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVN 180
           SK I EISHSEEENRNA GST+SN SAS+I SDEP KTK G+CGKEFDSVDDSLAIVAV+
Sbjct: 187 SKGINEISHSEEENRNARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVD 246

Query: 181 WPEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
            PEKSETG++L P ISERIIEVLNDLK AR RIQ SM+ICE +MI+V PV
Sbjct: 247 SPEKSETGEQLKPVISERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 295

BLAST of Lsi03G020700 vs. NCBI nr
Match: XP_011651920.1 (uncharacterized protein LOC105434957 [Cucumis sativus] >KGN58914.1 hypothetical protein Csa_001220 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 1.2e-83
Identity = 183/230 (79.57%), Postives = 201/230 (87.39%), Query Frame = 0

Query: 1   MAPTTKVDIKWSGNKM-EGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQ 60
           MAP TK+DIKWSGNKM EGGEV  TMECLRRRLLAER ASLLAK+EAELM KRS+ELEKQ
Sbjct: 1   MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRSSELEKQ 60

Query: 61  ITKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRN 120
           ITKQIQMK +AEKKLQLLKKKLESLNLSSTMVNSEAS+SSEI +E+EPKT IEV PL  +
Sbjct: 61  ITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASVSSEICNENEPKTPIEVQPLPSH 120

Query: 121 SKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVN 180
           SK I EI HSEEENRNA GSTSSN SAS+I SD+P KTKIGNCGKE DSVDDSLAIVAV+
Sbjct: 121 SKGISEIFHSEEENRNARGSTSSNISASKIHSDKPSKTKIGNCGKEIDSVDDSLAIVAVD 180

Query: 181 WPEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
            P KSET ++L P ISERIIEVLNDLK ARERIQ SMK+C+ +MI+V P+
Sbjct: 181 SPAKSETFEQLKPVISERIIEVLNDLKRARERIQSSMKLCD-HMIEVSPI 229

BLAST of Lsi03G020700 vs. NCBI nr
Match: XP_023538931.1 (uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.9 bits (803), Expect = 1.1e-81
Identity = 179/229 (78.17%), Postives = 197/229 (86.03%), Query Frame = 0

Query: 1   MAPTTKVDIKWSGNKMEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60
           MA +TK+DIKWSGN MEG EVL TMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI
Sbjct: 1   MAHSTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60

Query: 61  TKQIQMKTKAEKKLQLLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNS 120
           T+Q QM+TKAEKKLQLLKKKLESLNLS TM+NSE SISSEI D+DEPKTL     L  NS
Sbjct: 61  TEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDDDEPKTLTTATSLPSNS 120

Query: 121 KAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNW 180
           + IGEISHS+EEN NA GSTSS+SS SEICS+E  K KI N G EF+SV+DSLA+VAVN 
Sbjct: 121 QTIGEISHSDEENPNARGSTSSSSSGSEICSNESSKEKIENSGDEFNSVNDSLALVAVNS 180

Query: 181 PEKSETGDELNPAISERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
           PE++ETG E+   ISER+IEVLNDLK ARERIQRSMKICELNM+KV PV
Sbjct: 181 PEEAETG-EMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of Lsi03G020700 vs. NCBI nr
Match: KAA0044053.1 (suppressor protein SRP40-like isoform X2 [Cucumis melo var. makuwa] >TYK25082.1 suppressor protein SRP40-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 311.6 bits (797), Expect = 5.6e-81
Identity = 178/214 (83.18%), Postives = 192/214 (89.72%), Query Frame = 0

Query: 16  MEGGEVLITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITKQIQMKTKAEKKLQ 75
           +EGGEV  TMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQITKQIQMK +AEKKLQ
Sbjct: 2   VEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQITKQIQMKARAEKKLQ 61

Query: 76  LLKKKLESLNLSSTMVNSEASISSEILDEDEPKTLIEVPPLRRNSKAIGEISHSEEENRN 135
           LLKKKLESLNLSSTMVNSEASISSEI +EDEPKTLIEVPPL RNSK I EISHSEEENRN
Sbjct: 62  LLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRNSKGINEISHSEEENRN 121

Query: 136 ACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDSLAIVAVNWPEKSETGDELNPAIS 195
           A GST+SN SAS+I SDEP KTK G+CGKEFDSVDDSLAIVAV+ PEKSETG++L P IS
Sbjct: 122 ARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVDSPEKSETGEQLKPVIS 181

Query: 196 ERIIEVLNDLKHARERIQRSMKICELNMIKVGPV 230
           ERIIEVLNDLK AR RIQ SM+ICE +MI+V PV
Sbjct: 182 ERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 214

BLAST of Lsi03G020700 vs. TAIR 10
Match: AT2G37300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages. )

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-09
Identity = 61/180 (33.89%), Postives = 94/180 (52.22%), Query Frame = 0

Query: 5   TKVDIKWSGNKMEGGEV----LITMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 64
           TK    ++  KME  E       T+ECLR RLLAERQ S  AKEEAEL+ ++  ELE+ +
Sbjct: 69  TKCRTNFASKKMEEEEEKEEGQRTVECLRGRLLAERQVSRSAKEEAELITRKMEELERNL 128

Query: 65  TKQIQMKTKAEKKLQLLKKKLE-------SLNLSSTMVNSEASISSEILDEDEPKTLIE- 124
            ++I+++ KAEK+L+LL KKLE       S   SS+ V+  +S+ +    E+E +T    
Sbjct: 129 KEEIRLREKAEKRLKLLMKKLEFIKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSG 188

Query: 125 VPPLRRNSKAIGEISHSEEENRNACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDS 173
                +   A   ++ +EE + ++     S+  AS + S    K +    G EF    D+
Sbjct: 189 AVDEGKTDHATENVASTEEADSSSKLKDVSSGEASVVASTSSHKEE-SQFGNEFSWYSDA 247

BLAST of Lsi03G020700 vs. TAIR 10
Match: AT2G37300.1 (unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 19; Plants - 25; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-08
Identity = 55/157 (35.03%), Postives = 86/157 (54.78%), Query Frame = 0

Query: 24  TMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITKQIQMKTKAEKKLQLLKKKLE- 83
           T+ECLR RLLAERQ S  AKEEAEL+ ++  ELE+ + ++I+++ KAEK+L+LL KKLE 
Sbjct: 13  TVECLRGRLLAERQVSRSAKEEAELITRKMEELERNLKEEIRLREKAEKRLKLLMKKLEF 72

Query: 84  ------SLNLSSTMVNSEASISSEILDEDEPKTLIE-VPPLRRNSKAIGEISHSEEENRN 143
                 S   SS+ V+  +S+ +    E+E +T         +   A   ++ +EE + +
Sbjct: 73  IKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSGAVDEGKTDHATENVASTEEADSS 132

Query: 144 ACGSTSSNSSASEICSDEPLKTKIGNCGKEFDSVDDS 173
           +     S+  AS + S    K +    G EF    D+
Sbjct: 133 SKLKDVSSGEASVVASTSSHKEE-SQFGNEFSWYSDA 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3B6U81.0e-8883.04uncharacterized protein LOC103486426 OS=Cucumis melo OX=3656 GN=LOC103486426 PE=... [more]
A0A0A0LDB55.8e-8479.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736620 PE=4 SV=1[more]
A0A5A7TKN72.7e-8183.18Suppressor protein SRP40-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A6J1L3052.3e-8077.73uncharacterized protein LOC111498645 OS=Cucurbita maxima OX=3661 GN=LOC111498645... [more]
A0A6J1CXG52.5e-7171.62uncharacterized protein LOC111015099 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
Match NameE-valueIdentityDescription
XP_038906280.15.8e-9487.34uncharacterized protein LOC120092141 [Benincasa hispida][more]
XP_008442604.22.1e-8883.04PREDICTED: uncharacterized protein LOC103486426 [Cucumis melo][more]
XP_011651920.11.2e-8379.57uncharacterized protein LOC105434957 [Cucumis sativus] >KGN58914.1 hypothetical ... [more]
XP_023538931.11.1e-8178.17uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo][more]
KAA0044053.15.6e-8183.18suppressor protein SRP40-like isoform X2 [Cucumis melo var. makuwa] >TYK25082.1 ... [more]
Match NameE-valueIdentityDescription
AT2G37300.23.6e-0933.89unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G37300.11.0e-0835.03unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..149
NoneNo IPR availablePANTHERPTHR33701TRANSMEMBRANE PROTEINcoord: 1..150
NoneNo IPR availablePANTHERPTHR33701TRANSMEMBRANE PROTEINcoord: 133..217
NoneNo IPR availablePANTHERPTHR33701:SF2TRANSMEMBRANE PROTEINcoord: 1..150
coord: 133..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G020700.1Lsi03G020700.1mRNA