Homology
BLAST of Lsi03G020440 vs. ExPASy Swiss-Prot
Match:
Q9LFI1 (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)
HSP 1 Score: 896.0 bits (2314), Expect = 3.1e-259
Identity = 426/722 (59.00%), Postives = 552/722 (76.45%), Query Frame = 0
Query: 53 DDKLISLCKKNCHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHML 112
+D + SLCK N +REAL+AFD QK S+ ++ TY LI ACSS RSL GRKIH H+L
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 113 TFNYQPDMILQNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIA 172
N + D IL NHIL+MYGKCGSL++AR +FD MP +N+VS+TS+I+GYS GQ AI
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 173 LYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYT 232
LY++ML+ +PD F FGS++K+C+ D L +QLHA V+K E SHLIAQNALI+MY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 233 KLSQMADAKNVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFG 292
+ +QM+DA VF I +KDLISW S+IAGFSQLG+E EAL H +EMLS V+ PNE++FG
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 293 SAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKP 352
S+ ACS LL P+YG QIHGLCIK L + AGCSLCDMYA+CGFL SAR VF IE+P
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 353 DLVAWNSIIAGFASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVH 412
D +WN IIAG A+ G A E++S FS+MR +G +P+ +++ SLLCA ++P+ L+QGMQ+H
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 413 SYIVRMGFDLDIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQA 472
SYI++ GF D+ VCNSLL+MY+ CS+L +FE N AD VSWNT+LTACLQ Q
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 473 GEVLRLTKLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNAL 532
E+LRL KLML S +PDH+T+ N+L +I+S ++GSQVHC+ +K+GL + + N L
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 533 INMYTKCGSLGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNE 592
I+MY KCGSLG AR++FDS+DN D++SWS+LIVGYAQ+G GEEA LF+ M+ G++PN
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 593 ITFVGILTACSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIK 652
+TFVG+LTACSH+G+VEEGLKLY TMQ E+ ISPTKEHCSC+VDLLARAG L+ AE FI
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 653 HMPFDPDIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKD 712
M +PD+VVWKTLL+ACK GN+ + ++AAEN+LKIDP NS A V+LC++HASSG W++
Sbjct: 635 EMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEN 694
Query: 713 FAQYRSSMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGC 772
A RSSM++ +V K+PGQSWIEI+DK+H+F AED HPER IYT+L + Q+LD+ C
Sbjct: 695 AALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDE-C 754
Query: 773 DP 775
+P
Sbjct: 755 NP 755
BLAST of Lsi03G020440 vs. ExPASy Swiss-Prot
Match:
Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 471.9 bits (1213), Expect = 1.4e-131
Identity = 237/730 (32.47%), Postives = 401/730 (54.93%), Query Frame = 0
Query: 45 PVTDHYSHDDKLISLCKKNCHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHG 104
P + Y + + + K EAL+ + ++ SP K T+ +I AC+ L E G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDK-YTFPSVIKACAGLFDAEMG 126
Query: 105 RKIHRHMLTFNYQPDMILQNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHY 164
++ +L ++ D+ + N +++MY + G L AR +FD MP++++VSW S+ISGYS +
Sbjct: 127 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 186
Query: 165 GQEDNAIALYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQ 224
G + A+ +Y ++ S +PD FT SV+ + L + LH LKS S ++
Sbjct: 187 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 246
Query: 225 NALISMYTKLSQMADAKNVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVY 284
N L++MY K + DA+ VF + ++D +S+ +MI G+ +L E++ F E L Q +
Sbjct: 247 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--F 306
Query: 285 QPNEFVFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSART 344
+P+ S AC L + + + I+ +K G + L D+YAKCG + +AR
Sbjct: 307 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 366
Query: 345 VFYHIEKPDLVAWNSIIAGFASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVM 404
VF +E D V+WNSII+G+ GD E++ F M + +T L L+ +
Sbjct: 367 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 426
Query: 405 LNQGMQVHSYIVRMGFDLDIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLT 464
L G +HS ++ G +D+ V N+L+ MY+KC + D+L+IF +G D V+WNT+++
Sbjct: 427 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVIS 486
Query: 465 ACLQQNQAGEVLRLTKLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNL 524
AC++ L++T M S + PD T L +A+ +G ++HC +++ G
Sbjct: 487 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 546
Query: 525 DTSVSNALINMYTKCGSLGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMR 584
+ + NALI MY+KCG L + ++F+ + D+++W+ +I Y G GE+A E F M
Sbjct: 547 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 606
Query: 585 GLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCL 644
G+ P+ + F+ I+ ACSH G+V+EGL + M+ Y I P EH +C+VDLL+R+ +
Sbjct: 607 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 666
Query: 645 DGAEDFIKHMPFDPDIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIH 704
AE+FI+ MP PD +W ++L AC+ G++E +R + +++++P + ++ N +
Sbjct: 667 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 726
Query: 705 ASSGCWKDFAQYRSSMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELM 764
A+ W + R S++ +++K PG SWIE+ VHVF + D P+ IY LE L
Sbjct: 727 AALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 786
Query: 765 LQVLDDGCDP 775
+ +G P
Sbjct: 787 SLMAKEGYIP 792
BLAST of Lsi03G020440 vs. ExPASy Swiss-Prot
Match:
Q5G1T1 (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)
HSP 1 Score: 471.1 bits (1211), Expect = 2.5e-131
Identity = 248/719 (34.49%), Postives = 410/719 (57.02%), Query Frame = 0
Query: 66 REALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMILQNH 125
R A+ A D+ + P+ S+T++ L+ +C R G+ +H ++ F+ +PD +L N
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 126 ILNMYGKCGSLKEARNIFDAM---PLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSGY 185
++++Y K G +A ++F+ M ++VVSW++M++ Y + G+E +AI ++V+ L G
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 186 IPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKS-EFGSHLIAQNALISMYTK-LSQMADA 245
+P+ + + +V+++CS D + R ++K+ F S + +LI M+ K + +A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 246 KNVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSK 305
VF + ++++W MI Q+G+ EA+ F +M+ ++ ++F S FSAC++
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAE 282
Query: 306 LLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKC---GFLGSARTVFYHIEKPDLVAW 365
L + G+Q+H I+ GL D+ CSL DMYAKC G + R VF +E +++W
Sbjct: 283 LENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 342
Query: 366 NSIIAGF-ASVGDAKESLSFFSRMRHTGLV-PNDVTVLSLLCACSEPVMLNQGMQVHSYI 425
++I G+ + A E+++ FS M G V PN T S AC G QV
Sbjct: 343 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 402
Query: 426 VRMGFDLDIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEV 485
+ G + V NS++SM+ K + DA + FE + K ++VS+NT L + +
Sbjct: 403 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQA 462
Query: 486 LRLTKLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINM 545
+L + + T ++L + S G Q+H ++K GL+ + V NALI+M
Sbjct: 463 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 522
Query: 546 YTKCGSLGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITF 605
Y+KCGS+ A ++F+ ++N ++ISW+S+I G+A+ G E F M GVKPNE+T+
Sbjct: 523 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 582
Query: 606 VGILTACSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMP 665
V IL+ACSH+G+V EG + + +M E++ I P EH +CMVDLL RAG L A +FI MP
Sbjct: 583 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 642
Query: 666 FDPDIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQ 725
F D++VW+T L AC+VH N E+GK AA +L++DP+ AA + L NI+A +G W++ +
Sbjct: 643 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 702
Query: 726 YRSSMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDP 775
R M++ N+ K G SWIE+ DK+H F D+ HP +IY L+ L+ ++ G P
Sbjct: 703 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVP 757
BLAST of Lsi03G020440 vs. ExPASy Swiss-Prot
Match:
Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 469.2 bits (1206), Expect = 9.3e-131
Identity = 245/712 (34.41%), Postives = 390/712 (54.78%), Query Frame = 0
Query: 61 KKNCHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDM 120
K+ C A++ F +K S +S T +++A + +L+ G +H + ++
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRS-TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 363
Query: 121 ILQNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRS 180
+ + +++MY KC ++ A +F+A+ KN V W +MI GY+H G+ + L++ M S
Sbjct: 364 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 423
Query: 181 GYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADA 240
GY D FTF S++ +C+ D + Q H+ ++K + +L NAL+ MY K + DA
Sbjct: 424 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 483
Query: 241 KNVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSK 300
+ +F + +D ++W ++I + Q E EA F+ M + S AC+
Sbjct: 484 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA-CLASTLKACTH 543
Query: 301 LLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSI 360
+ G+Q+H L +K GL DL G SL DMY+KCG + AR VF + + +V+ N++
Sbjct: 544 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL 603
Query: 361 IAGFASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGF 420
IAG+ S + +E++ F M G+ P+++T +++ AC +P L G Q H I + GF
Sbjct: 604 IAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF 663
Query: 421 DLDIPVCN-SLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLT 480
+ SLL MY + +A +F + + IV W M++ Q E L+
Sbjct: 664 SSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFY 723
Query: 481 KLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKC 540
K M + PD T VL ++S G +H I +LD SN LI+MY KC
Sbjct: 724 KEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC 783
Query: 541 GSLGCARKMFDSI-DNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGI 600
G + + ++FD + +++SW+SLI GYA+ G E+A ++F +MR + P+EITF+G+
Sbjct: 784 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 843
Query: 601 LTACSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDP 660
LTACSH G V +G K++ M +Y I +H +CMVDLL R G L A+DFI+ P
Sbjct: 844 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP 903
Query: 661 DIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRS 720
D +W +LL AC++HG+ G+ +AE +++++P NS+A V+L NI+AS GCW+ R
Sbjct: 904 DARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRK 963
Query: 721 SMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDD 771
MR V KVPG SWI+++ + H+F A D H E GKI LE+L + DD
Sbjct: 964 VMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDD 1012
BLAST of Lsi03G020440 vs. ExPASy Swiss-Prot
Match:
Q9SVA5 (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)
HSP 1 Score: 465.7 bits (1197), Expect = 1.0e-129
Identity = 249/720 (34.58%), Postives = 408/720 (56.67%), Query Frame = 0
Query: 56 LISLCKKN-CHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGR----KIHRH 115
++S C + + E+L F F + + I ACS L GR ++
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSF 175
Query: 116 MLTFNYQPDMILQNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNA 175
++ + D+ + +++ Y K G++ AR +FDA+P K+ V+WT+MISG G+ +
Sbjct: 176 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 235
Query: 176 IALYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISM 235
+ L+ Q++ +PD + +V+ +CS L +Q+HAH+L+ N LI
Sbjct: 236 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 295
Query: 236 YTKLSQMADAKNVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFV 295
Y K ++ A +F+ + K++ISW ++++G+ Q EA+ F M S+ +P+ +
Sbjct: 296 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYA 355
Query: 296 FGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIE 355
S ++C+ L +G Q+H IK LG+D + SL DMYAKC L AR VF
Sbjct: 356 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 415
Query: 356 KPDLVAWNSIIAGFASVG---DAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQ 415
D+V +N++I G++ +G + E+L+ F MR + P+ +T +SLL A + L
Sbjct: 416 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 475
Query: 416 GMQVHSYIVRMGFDLDIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACL 475
Q+H + + G +LDI ++L+ +YS C L D+ +F+ + K D+V WN+M +
Sbjct: 476 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYV 535
Query: 476 QQNQAGEVLRLTKLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTS 535
QQ++ E L L + S +PD T N++ ++G +AS ++G + HC ++K GL +
Sbjct: 536 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 595
Query: 536 VSNALINMYTKCGSLGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLG 595
++NAL++MY KCGS A K FDS + D++ W+S+I YA G G++A ++ M G
Sbjct: 596 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 655
Query: 596 VKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGA 655
++PN ITFVG+L+ACSH G+VE+GLK + M + I P EH CMV LL RAG L+ A
Sbjct: 656 IEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKA 715
Query: 656 EDFIKHMPFDPDIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASS 715
+ I+ MP P +VW++LL+ C GN+E+ + AAE + DP +S + ML NI+AS
Sbjct: 716 RELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASK 775
Query: 716 GCWKDFAQYRSSMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQV 768
G W + + R M+ V K PG+SWI I +VH+FL++D H + +IY +L++L++Q+
Sbjct: 776 GMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
BLAST of Lsi03G020440 vs. ExPASy TrEMBL
Match:
A0A0A0LDF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736910 PE=4 SV=1)
HSP 1 Score: 1458.7 bits (3775), Expect = 0.0e+00
Identity = 707/774 (91.34%), Postives = 742/774 (95.87%), Query Frame = 0
Query: 4 SDAIVFFNPFSPTTSTKNFKPQLHLALSHIRLNTQLAFSPFPVTDHYSHDDKLISLCKKN 63
SDAIVFFNPFSPT+S KNFKPQLHLALSHIRLNTQLAFSP P+T HY HDDK+ISLCKKN
Sbjct: 17 SDAIVFFNPFSPTSSIKNFKPQLHLALSHIRLNTQLAFSPCPLTVHYPHDDKIISLCKKN 76
Query: 64 CHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMILQ 123
HREAL+AFDIFQKCS+SPLKS+TYTHLINACSSLRSLEHGRKIHRHMLT NYQPDMILQ
Sbjct: 77 LHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQ 136
Query: 124 NHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSGYI 183
NHIL+MYGKCGSLKEARN+FD+MPLKNVVSWTSMISGYS YG+EDNAI LYVQMLRSG+I
Sbjct: 137 NHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHI 196
Query: 184 PDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADAKNV 243
PDHFTFGS+VKSCSGLDDF LARQLHAHVLKSEFG+ LIAQNALISMYTK SQMADA NV
Sbjct: 197 PDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINV 256
Query: 244 FSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSKLLE 303
FS IIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQ VYQPNEFVFGSAFSACSKLLE
Sbjct: 257 FSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLE 316
Query: 304 PNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSIIAG 363
P+ GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFL SARTVFYHIEKPDLVAWN+IIAG
Sbjct: 317 PDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAG 376
Query: 364 FASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGFDLD 423
FASV +AKES SFFS+MRHTGLVPNDVTVLSLLCACSEPVMLN G+QVHSYIV+MGF+LD
Sbjct: 377 FASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLD 436
Query: 424 IPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLTKLML 483
IPVCNSLLSMYSKCSNLNDALQ+FE IGNKADIVSWNT+LTACLQQNQAGEVLRLTKLM
Sbjct: 437 IPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMF 496
Query: 484 ASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKCGSLG 543
AS IKPDHVTLTNVLVSSGQIASYEVGSQ+HCFIMKSGLNLD SVSNALINMYTKCGSL
Sbjct: 497 ASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLE 556
Query: 544 CARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGILTACS 603
CARKMFDSI NPDIISWSSLIVGYAQAGCG+EAFELFRTMRGLGVKPNEITFVGILTACS
Sbjct: 557 CARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACS 616
Query: 604 HIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDPDIVVW 663
HIGMVEEGLKLYRTMQE+Y ISPTKEHCSCMVDLLARAGCLD AEDFIK MPF PD+VVW
Sbjct: 617 HIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVW 676
Query: 664 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRSSMRQM 723
KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAA+VMLCNIHASSG WKDFA+ RSSMR+M
Sbjct: 677 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRM 736
Query: 724 NVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDPIKV 778
+V KVPGQSWIEIKDKVHVFLAED+LHPERGKIYTMLEELMLQ+LDDGCDP+++
Sbjct: 737 DVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILDDGCDPLQM 790
BLAST of Lsi03G020440 vs. ExPASy TrEMBL
Match:
A0A5A7TPL0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002390 PE=4 SV=1)
HSP 1 Score: 1451.4 bits (3756), Expect = 0.0e+00
Identity = 705/774 (91.09%), Postives = 736/774 (95.09%), Query Frame = 0
Query: 4 SDAIVFFNPFSPTTSTKNFKPQLHLALSHIRLNTQLAFSPFPVTDHYSHDDKLISLCKKN 63
SDAIVFFNPFSP+TSTKNFKPQLHLA SHIRL TQLAFSP PVT HY HDDK+ISLCKKN
Sbjct: 17 SDAIVFFNPFSPSTSTKNFKPQLHLAHSHIRLGTQLAFSPCPVTVHYPHDDKIISLCKKN 76
Query: 64 CHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMILQ 123
HREALQAFDIF+KCS+SPLKSITYTHLINACSSLRSLEHGRKIHRHMLT NYQPDMILQ
Sbjct: 77 LHREALQAFDIFRKCSSSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQ 136
Query: 124 NHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSGYI 183
NHIL+MYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYS YGQEDNAI LY+QMLRSGYI
Sbjct: 137 NHILSMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSRYGQEDNAITLYIQMLRSGYI 196
Query: 184 PDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADAKNV 243
PDHFTFGS+VKSCSGLDDFMLARQLHAHVLK EFG HLIAQNALISMYTK SQMADA NV
Sbjct: 197 PDHFTFGSIVKSCSGLDDFMLARQLHAHVLKFEFGGHLIAQNALISMYTKFSQMADAINV 256
Query: 244 FSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSKLLE 303
FS IIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQ VYQPNEFVFGSAFSACSKLLE
Sbjct: 257 FSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLE 316
Query: 304 PNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSIIAG 363
P+ GRQIHGLCIK GLGSD+FAGCSLCDMYAKCGFL SARTVFYHIEKPDLVAWN+IIAG
Sbjct: 317 PDCGRQIHGLCIKLGLGSDIFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAG 376
Query: 364 FASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGFDLD 423
FASV +AKESLSFFS+MRH G+VPNDVTVLSLLCACSEPVMLN GMQVHSYIV+MGF+LD
Sbjct: 377 FASVSNAKESLSFFSQMRHRGVVPNDVTVLSLLCACSEPVMLNNGMQVHSYIVKMGFNLD 436
Query: 424 IPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLTKLML 483
IPVCNSLLSMYSKCSNLNDALQ+FEGIGNKADIVSWNT+LTACLQQNQAGEVLRLTKLM
Sbjct: 437 IPVCNSLLSMYSKCSNLNDALQVFEGIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMF 496
Query: 484 ASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKCGSLG 543
AS I PDHVTLTNVLVSSGQIASYEVGSQ+HCFIMKSGLNLDTSVSNALINMYTKCGSL
Sbjct: 497 ASRIMPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDTSVSNALINMYTKCGSLE 556
Query: 544 CARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGILTACS 603
CARKMFDSI NPDIISWSSLIVGYAQAGCG+EAFELFRTMRGLGVKPNEITF+GILTACS
Sbjct: 557 CARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFLGILTACS 616
Query: 604 HIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDPDIVVW 663
HIGMVEEGLKLYRTMQE+ ISPTKEHCSC+VDLLARAGCLD AE+FIK MPF PD+VVW
Sbjct: 617 HIGMVEEGLKLYRTMQEDCRISPTKEHCSCIVDLLARAGCLDVAEEFIKQMPFVPDVVVW 676
Query: 664 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRSSMRQM 723
KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAA+VMLCNIHASSG WKD AQ R SMR+M
Sbjct: 677 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDLAQLRISMRRM 736
Query: 724 NVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDPIKV 778
+V KVPGQSWIEIKDKVHVFLAED+LHPERGKIYTMLEELMLQ LDD CDP+++
Sbjct: 737 DVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQTLDDSCDPLQM 790
BLAST of Lsi03G020440 vs. ExPASy TrEMBL
Match:
A0A1S3B684 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486463 PE=4 SV=1)
HSP 1 Score: 1451.4 bits (3756), Expect = 0.0e+00
Identity = 705/774 (91.09%), Postives = 736/774 (95.09%), Query Frame = 0
Query: 4 SDAIVFFNPFSPTTSTKNFKPQLHLALSHIRLNTQLAFSPFPVTDHYSHDDKLISLCKKN 63
SDAIVFFNPFSP+TSTKNFKPQLHLA SHIRL TQLAFSP PVT HY HDDK+ISLCKKN
Sbjct: 17 SDAIVFFNPFSPSTSTKNFKPQLHLAHSHIRLGTQLAFSPCPVTVHYPHDDKIISLCKKN 76
Query: 64 CHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMILQ 123
HREALQAFDIF+KCS+SPLKSITYTHLINACSSLRSLEHGRKIHRHMLT NYQPDMILQ
Sbjct: 77 LHREALQAFDIFRKCSSSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQ 136
Query: 124 NHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSGYI 183
NHIL+MYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYS YGQEDNAI LY+QMLRSGYI
Sbjct: 137 NHILSMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSRYGQEDNAITLYIQMLRSGYI 196
Query: 184 PDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADAKNV 243
PDHFTFGS+VKSCSGLDDFMLARQLHAHVLK EFG HLIAQNALISMYTK SQMADA NV
Sbjct: 197 PDHFTFGSIVKSCSGLDDFMLARQLHAHVLKFEFGGHLIAQNALISMYTKFSQMADAINV 256
Query: 244 FSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSKLLE 303
FS IIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQ VYQPNEFVFGSAFSACSKLLE
Sbjct: 257 FSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLE 316
Query: 304 PNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSIIAG 363
P+ GRQIHGLCIK GLGSD+FAGCSLCDMYAKCGFL SARTVFYHIEKPDLVAWN+IIAG
Sbjct: 317 PDCGRQIHGLCIKLGLGSDIFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAG 376
Query: 364 FASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGFDLD 423
FASV +AKESLSFFS+MRH G+VPNDVTVLSLLCACSEPVMLN GMQVHSYIV+MGF+LD
Sbjct: 377 FASVSNAKESLSFFSQMRHRGVVPNDVTVLSLLCACSEPVMLNNGMQVHSYIVKMGFNLD 436
Query: 424 IPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLTKLML 483
IPVCNSLLSMYSKCSNLNDALQ+FEGIGNKADIVSWNT+LTACLQQNQAGEVLRLTKLM
Sbjct: 437 IPVCNSLLSMYSKCSNLNDALQVFEGIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMF 496
Query: 484 ASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKCGSLG 543
AS I PDHVTLTNVLVSSGQIASYEVGSQ+HCFIMKSGLNLDTSVSNALINMYTKCGSL
Sbjct: 497 ASRIMPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDTSVSNALINMYTKCGSLE 556
Query: 544 CARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGILTACS 603
CARKMFDSI NPDIISWSSLIVGYAQAGCG+EAFELFRTMRGLGVKPNEITF+GILTACS
Sbjct: 557 CARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFLGILTACS 616
Query: 604 HIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDPDIVVW 663
HIGMVEEGLKLYRTMQE+ ISPTKEHCSC+VDLLARAGCLD AE+FIK MPF PD+VVW
Sbjct: 617 HIGMVEEGLKLYRTMQEDCRISPTKEHCSCIVDLLARAGCLDVAEEFIKQMPFVPDVVVW 676
Query: 664 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRSSMRQM 723
KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAA+VMLCNIHASSG WKD AQ R SMR+M
Sbjct: 677 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDLAQLRISMRRM 736
Query: 724 NVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDPIKV 778
+V KVPGQSWIEIKDKVHVFLAED+LHPERGKIYTMLEELMLQ LDD CDP+++
Sbjct: 737 DVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQTLDDSCDPLQM 790
BLAST of Lsi03G020440 vs. ExPASy TrEMBL
Match:
A0A6J1F1S7 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111441412 PE=4 SV=1)
HSP 1 Score: 1384.4 bits (3582), Expect = 0.0e+00
Identity = 674/776 (86.86%), Postives = 720/776 (92.78%), Query Frame = 0
Query: 3 TSDAIVFFNPFSPTTSTKNFKPQLHLALSHIRLNTQLAF-SPFPVTDHYSHDDKLISLCK 62
+S+AIVFFNP SP TS KNFKPQL LALSHIR ++ LA P PVT+H S+DD +ISLCK
Sbjct: 44 SSEAIVFFNPCSPATSIKNFKPQLRLALSHIRFSSLLASPPPSPVTEH-SYDDNIISLCK 103
Query: 63 KNCHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMI 122
K HREALQAFDIFQKCS+SPL SITYTHLI+ACSSLRSLEHGRKIH HM TFNYQPD+I
Sbjct: 104 KKLHREALQAFDIFQKCSSSPLNSITYTHLIHACSSLRSLEHGRKIHCHMSTFNYQPDLI 163
Query: 123 LQNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSG 182
LQNHILNMYGKCGSLKEARNIFDAMPLKN VSWTSMISGYSHYGQ+DNAI LYVQMLRSG
Sbjct: 164 LQNHILNMYGKCGSLKEARNIFDAMPLKNAVSWTSMISGYSHYGQDDNAITLYVQMLRSG 223
Query: 183 YIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADAK 242
+IPDHFTFGSVVKSCSGLDD MLARQLHAHVLKSEFG + IAQNALISMYTK SQ+ADA
Sbjct: 224 HIPDHFTFGSVVKSCSGLDDLMLARQLHAHVLKSEFGGNPIAQNALISMYTKFSQIADAT 283
Query: 243 NVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSKL 302
NVFSHIIIKDLISWGSMIAGFSQLGYE+EALCHFREMLSQ +YQPNEFVFGSAFSACS L
Sbjct: 284 NVFSHIIIKDLISWGSMIAGFSQLGYEIEALCHFREMLSQAIYQPNEFVFGSAFSACSSL 343
Query: 303 LEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSII 362
EPN GRQIHGLCIKFGLGSD FAGCSLCDMYAKCGFLGSARTVF IEKPDLVAWN+II
Sbjct: 344 SEPNCGRQIHGLCIKFGLGSDRFAGCSLCDMYAKCGFLGSARTVFCQIEKPDLVAWNAII 403
Query: 363 AGFASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGFD 422
AGFASVGDAKESLSFFS+MRHTGL NDVTVLSLLCACS+P+MLNQGMQVHSYIV+ GFD
Sbjct: 404 AGFASVGDAKESLSFFSQMRHTGLASNDVTVLSLLCACSDPMMLNQGMQVHSYIVKTGFD 463
Query: 423 LDIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLTKL 482
L++PVCN LLSMYSKCS LND+L+IFE IGNKADIVSWNTMLTAC QNQAGEVLRL KL
Sbjct: 464 LEVPVCNGLLSMYSKCSVLNDSLKIFEDIGNKADIVSWNTMLTACRLQNQAGEVLRLMKL 523
Query: 483 MLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKCGS 542
MLASHIK D VTLTNVLVSSGQIASYEVGSQVHCFIMKSG NLDTSVSNALINMY KCGS
Sbjct: 524 MLASHIKSDRVTLTNVLVSSGQIASYEVGSQVHCFIMKSGQNLDTSVSNALINMYMKCGS 583
Query: 543 LGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGILTA 602
LGCARKMFDSI++PD+ISWSSLIVGYAQAGCGEEAFELFRTMRGLG++PNEITF+GILTA
Sbjct: 584 LGCARKMFDSINDPDVISWSSLIVGYAQAGCGEEAFELFRTMRGLGIRPNEITFIGILTA 643
Query: 603 CSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDPDIV 662
C HIGMVEEGL+LYRTMQE+ ISPTKEHCSC+VDLLARAGCLD AEDFIK MPF+PDIV
Sbjct: 644 CCHIGMVEEGLRLYRTMQEQDGISPTKEHCSCIVDLLARAGCLDAAEDFIKKMPFEPDIV 703
Query: 663 VWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRSSMR 722
VW TLLAACK+HGNLEVGKRAAENVLK DPSNSAALVMLCNIHASSG WKDFA+ R SMR
Sbjct: 704 VWMTLLAACKLHGNLEVGKRAAENVLKNDPSNSAALVMLCNIHASSGHWKDFARLRRSMR 763
Query: 723 QMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDPIKV 778
+M+VSKVPGQSWIEIKD+VHVF AEDSLHPERG+IYTMLEELM+Q+LDD CDP+++
Sbjct: 764 RMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMVQILDDSCDPLQM 818
BLAST of Lsi03G020440 vs. ExPASy TrEMBL
Match:
A0A6J1J911 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482386 PE=4 SV=1)
HSP 1 Score: 1382.5 bits (3577), Expect = 0.0e+00
Identity = 670/775 (86.45%), Postives = 717/775 (92.52%), Query Frame = 0
Query: 3 TSDAIVFFNPFSPTTSTKNFKPQLHLALSHIRLNTQLAFSPFPVTDHYSHDDKLISLCKK 62
+S+AIVFFNP SP TS KNFKPQLHLALSHIR ++ LA P PVT+H SHDD +ISLCKK
Sbjct: 44 SSEAIVFFNPCSPATSIKNFKPQLHLALSHIRFSSLLASPPSPVTEH-SHDDNIISLCKK 103
Query: 63 NCHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMIL 122
HREALQAFDIF KCS+SPL SITYTHLI+ACSSLR LEHGRKIH HM TFNYQPD+IL
Sbjct: 104 KLHREALQAFDIFHKCSSSPLNSITYTHLIHACSSLRFLEHGRKIHCHMSTFNYQPDLIL 163
Query: 123 QNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSGY 182
QNHILNMYGKCGSLKEARNIFDAMPLKN VSWTSMISGYSHYG++DNAI LYVQMLRSG+
Sbjct: 164 QNHILNMYGKCGSLKEARNIFDAMPLKNAVSWTSMISGYSHYGEDDNAITLYVQMLRSGH 223
Query: 183 IPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADAKN 242
IPDHFTFGSVVKSCSGLDD MLARQLHAHVLKSEFG + IAQNALISMYTK SQ+ADA N
Sbjct: 224 IPDHFTFGSVVKSCSGLDDLMLARQLHAHVLKSEFGGNPIAQNALISMYTKFSQIADATN 283
Query: 243 VFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSKLL 302
VFSHII KDLISWGSMIAGFSQLG E+EALCHFREMLSQP+YQPNEFVFGSAFSACS L
Sbjct: 284 VFSHIITKDLISWGSMIAGFSQLGCEIEALCHFREMLSQPIYQPNEFVFGSAFSACSNLS 343
Query: 303 EPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSIIA 362
EPN GRQIHGLCIKFGLGSD FAGCSLCDMYAKCGFLGSARTVF IEKPDLVAWN+IIA
Sbjct: 344 EPNCGRQIHGLCIKFGLGSDRFAGCSLCDMYAKCGFLGSARTVFCQIEKPDLVAWNAIIA 403
Query: 363 GFASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGFDL 422
GFASVGDAKESLSFFS+MRHTGL NDVTVLSLLCACSEP+MLNQGMQVHSYIV+ GFDL
Sbjct: 404 GFASVGDAKESLSFFSQMRHTGLASNDVTVLSLLCACSEPMMLNQGMQVHSYIVKTGFDL 463
Query: 423 DIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLTKLM 482
++ VCN LLSMYSKCS+LND+L+IFE IGNKAD+VSWNTMLTAC +NQAGEVLRL KLM
Sbjct: 464 EVLVCNGLLSMYSKCSDLNDSLKIFEDIGNKADVVSWNTMLTACRLRNQAGEVLRLMKLM 523
Query: 483 LASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKCGSL 542
LASHIK D VTLTNVLVSSG IASYEVGSQVHCFIMKSG NLDTSVSNALINMY KCGSL
Sbjct: 524 LASHIKSDRVTLTNVLVSSGLIASYEVGSQVHCFIMKSGQNLDTSVSNALINMYMKCGSL 583
Query: 543 GCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGILTAC 602
GCARKMFDSID+PD+ISWSSLIVGYAQAGCGEEAFELFRTMRGLG++PNEITF+GILTAC
Sbjct: 584 GCARKMFDSIDDPDVISWSSLIVGYAQAGCGEEAFELFRTMRGLGIRPNEITFLGILTAC 643
Query: 603 SHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDPDIVV 662
H+GMVEEGL+LYRTMQE+ DISPTKEHCSC+VDLLARAGCLD AEDFIK MPF+PDIVV
Sbjct: 644 CHVGMVEEGLRLYRTMQEQDDISPTKEHCSCIVDLLARAGCLDAAEDFIKKMPFEPDIVV 703
Query: 663 WKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRSSMRQ 722
W TLLAACKVHGNLEVGKRAAENVL+ DPSNSAALVMLCNIHASSG WKDFA+ R SMR+
Sbjct: 704 WMTLLAACKVHGNLEVGKRAAENVLRNDPSNSAALVMLCNIHASSGHWKDFARLRRSMRR 763
Query: 723 MNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDPIKV 778
M+VSKVPGQSWIEIKD+VHVF AEDSLHPERG+IY MLEELMLQ+LDD CDP+++
Sbjct: 764 MDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYIMLEELMLQLLDDSCDPLQM 817
BLAST of Lsi03G020440 vs. NCBI nr
Match:
XP_038903429.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 [Benincasa hispida])
HSP 1 Score: 1494.6 bits (3868), Expect = 0.0e+00
Identity = 725/776 (93.43%), Postives = 749/776 (96.52%), Query Frame = 0
Query: 4 SDAIVFFNPFSPTTSTKNFKPQLHLALSHIRLNTQLAFSPFPVTDHYSHDDKLISLCKKN 63
SDA VFF PFSPT S KNFK +LHLALSHIRLNT LAFSP PVT+HYSHDDK+ISLCKKN
Sbjct: 17 SDASVFFTPFSPTASIKNFKSRLHLALSHIRLNTHLAFSPCPVTEHYSHDDKIISLCKKN 76
Query: 64 CHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMILQ 123
HREALQAFDIFQKCS+SPLKSITYTHLINACSSLRSLEHGR+IHRHMLTFN QPDMILQ
Sbjct: 77 LHREALQAFDIFQKCSSSPLKSITYTHLINACSSLRSLEHGREIHRHMLTFNCQPDMILQ 136
Query: 124 NHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSGYI 183
NHILNMYGKCGSLKEARNIF+AMPLKNVVSWTSMISGYSHYGQEDNAI +YVQMLRSGYI
Sbjct: 137 NHILNMYGKCGSLKEARNIFNAMPLKNVVSWTSMISGYSHYGQEDNAITMYVQMLRSGYI 196
Query: 184 PDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADAKNV 243
PDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFG HLIAQNALISMYTK S++ADA NV
Sbjct: 197 PDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNALISMYTKFSRIADATNV 256
Query: 244 FSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSKLLE 303
FSHI+IKDLISWGSMIAGFSQLGYELEALCHFREM+SQPVYQPNEFVFGSAFSACSKLLE
Sbjct: 257 FSHIVIKDLISWGSMIAGFSQLGYELEALCHFREMVSQPVYQPNEFVFGSAFSACSKLLE 316
Query: 304 PNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSIIAG 363
PN GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWN+IIAG
Sbjct: 317 PNCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNAIIAG 376
Query: 364 FASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGFDLD 423
FASVGDAKESLSFFS+MRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSY+V+MGFDLD
Sbjct: 377 FASVGDAKESLSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYVVKMGFDLD 436
Query: 424 IPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLTKLML 483
IPV N+LL MYSKCSNL DAL IFEGIG KADIVSWNT+LTACLQQNQAGEVLRLTKLML
Sbjct: 437 IPVSNTLLGMYSKCSNLTDALHIFEGIGTKADIVSWNTLLTACLQQNQAGEVLRLTKLML 496
Query: 484 ASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKCGSLG 543
ASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALIN YTKCGSLG
Sbjct: 497 ASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINTYTKCGSLG 556
Query: 544 CARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGILTACS 603
CARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAF LFRTMR LGVKPNEITFVGIL ACS
Sbjct: 557 CARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFVLFRTMRSLGVKPNEITFVGILIACS 616
Query: 604 HIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDPDIVVW 663
HIGMVEEGLKLY+TMQ+EY ISPTKEHCSCMVDLLARAGCLDGAE+FIK MPF+PDIVVW
Sbjct: 617 HIGMVEEGLKLYKTMQKEYGISPTKEHCSCMVDLLARAGCLDGAENFIKQMPFNPDIVVW 676
Query: 664 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRSSMRQM 723
KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSG WKDFAQ RSSMRQM
Sbjct: 677 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGHWKDFAQCRSSMRQM 736
Query: 724 NVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDPIKVTK 780
NVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYT+LEELMLQ+LDDGCDPI+VTK
Sbjct: 737 NVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTILEELMLQILDDGCDPIQVTK 792
BLAST of Lsi03G020440 vs. NCBI nr
Match:
XP_004137966.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucumis sativus])
HSP 1 Score: 1458.7 bits (3775), Expect = 0.0e+00
Identity = 707/774 (91.34%), Postives = 742/774 (95.87%), Query Frame = 0
Query: 4 SDAIVFFNPFSPTTSTKNFKPQLHLALSHIRLNTQLAFSPFPVTDHYSHDDKLISLCKKN 63
SDAIVFFNPFSPT+S KNFKPQLHLALSHIRLNTQLAFSP P+T HY HDDK+ISLCKKN
Sbjct: 17 SDAIVFFNPFSPTSSIKNFKPQLHLALSHIRLNTQLAFSPCPLTVHYPHDDKIISLCKKN 76
Query: 64 CHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMILQ 123
HREAL+AFDIFQKCS+SPLKS+TYTHLINACSSLRSLEHGRKIHRHMLT NYQPDMILQ
Sbjct: 77 LHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQ 136
Query: 124 NHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSGYI 183
NHIL+MYGKCGSLKEARN+FD+MPLKNVVSWTSMISGYS YG+EDNAI LYVQMLRSG+I
Sbjct: 137 NHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHI 196
Query: 184 PDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADAKNV 243
PDHFTFGS+VKSCSGLDDF LARQLHAHVLKSEFG+ LIAQNALISMYTK SQMADA NV
Sbjct: 197 PDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINV 256
Query: 244 FSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSKLLE 303
FS IIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQ VYQPNEFVFGSAFSACSKLLE
Sbjct: 257 FSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLE 316
Query: 304 PNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSIIAG 363
P+ GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFL SARTVFYHIEKPDLVAWN+IIAG
Sbjct: 317 PDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAG 376
Query: 364 FASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGFDLD 423
FASV +AKES SFFS+MRHTGLVPNDVTVLSLLCACSEPVMLN G+QVHSYIV+MGF+LD
Sbjct: 377 FASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLD 436
Query: 424 IPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLTKLML 483
IPVCNSLLSMYSKCSNLNDALQ+FE IGNKADIVSWNT+LTACLQQNQAGEVLRLTKLM
Sbjct: 437 IPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMF 496
Query: 484 ASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKCGSLG 543
AS IKPDHVTLTNVLVSSGQIASYEVGSQ+HCFIMKSGLNLD SVSNALINMYTKCGSL
Sbjct: 497 ASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLE 556
Query: 544 CARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGILTACS 603
CARKMFDSI NPDIISWSSLIVGYAQAGCG+EAFELFRTMRGLGVKPNEITFVGILTACS
Sbjct: 557 CARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACS 616
Query: 604 HIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDPDIVVW 663
HIGMVEEGLKLYRTMQE+Y ISPTKEHCSCMVDLLARAGCLD AEDFIK MPF PD+VVW
Sbjct: 617 HIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVW 676
Query: 664 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRSSMRQM 723
KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAA+VMLCNIHASSG WKDFA+ RSSMR+M
Sbjct: 677 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRM 736
Query: 724 NVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDPIKV 778
+V KVPGQSWIEIKDKVHVFLAED+LHPERGKIYTMLEELMLQ+LDDGCDP+++
Sbjct: 737 DVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILDDGCDPLQM 790
BLAST of Lsi03G020440 vs. NCBI nr
Match:
XP_008442662.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucumis melo] >KAA0044026.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25114.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1451.4 bits (3756), Expect = 0.0e+00
Identity = 705/774 (91.09%), Postives = 736/774 (95.09%), Query Frame = 0
Query: 4 SDAIVFFNPFSPTTSTKNFKPQLHLALSHIRLNTQLAFSPFPVTDHYSHDDKLISLCKKN 63
SDAIVFFNPFSP+TSTKNFKPQLHLA SHIRL TQLAFSP PVT HY HDDK+ISLCKKN
Sbjct: 17 SDAIVFFNPFSPSTSTKNFKPQLHLAHSHIRLGTQLAFSPCPVTVHYPHDDKIISLCKKN 76
Query: 64 CHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMILQ 123
HREALQAFDIF+KCS+SPLKSITYTHLINACSSLRSLEHGRKIHRHMLT NYQPDMILQ
Sbjct: 77 LHREALQAFDIFRKCSSSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQ 136
Query: 124 NHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSGYI 183
NHIL+MYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYS YGQEDNAI LY+QMLRSGYI
Sbjct: 137 NHILSMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSRYGQEDNAITLYIQMLRSGYI 196
Query: 184 PDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADAKNV 243
PDHFTFGS+VKSCSGLDDFMLARQLHAHVLK EFG HLIAQNALISMYTK SQMADA NV
Sbjct: 197 PDHFTFGSIVKSCSGLDDFMLARQLHAHVLKFEFGGHLIAQNALISMYTKFSQMADAINV 256
Query: 244 FSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSKLLE 303
FS IIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQ VYQPNEFVFGSAFSACSKLLE
Sbjct: 257 FSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLE 316
Query: 304 PNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSIIAG 363
P+ GRQIHGLCIK GLGSD+FAGCSLCDMYAKCGFL SARTVFYHIEKPDLVAWN+IIAG
Sbjct: 317 PDCGRQIHGLCIKLGLGSDIFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAG 376
Query: 364 FASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGFDLD 423
FASV +AKESLSFFS+MRH G+VPNDVTVLSLLCACSEPVMLN GMQVHSYIV+MGF+LD
Sbjct: 377 FASVSNAKESLSFFSQMRHRGVVPNDVTVLSLLCACSEPVMLNNGMQVHSYIVKMGFNLD 436
Query: 424 IPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLTKLML 483
IPVCNSLLSMYSKCSNLNDALQ+FEGIGNKADIVSWNT+LTACLQQNQAGEVLRLTKLM
Sbjct: 437 IPVCNSLLSMYSKCSNLNDALQVFEGIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMF 496
Query: 484 ASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKCGSLG 543
AS I PDHVTLTNVLVSSGQIASYEVGSQ+HCFIMKSGLNLDTSVSNALINMYTKCGSL
Sbjct: 497 ASRIMPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDTSVSNALINMYTKCGSLE 556
Query: 544 CARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGILTACS 603
CARKMFDSI NPDIISWSSLIVGYAQAGCG+EAFELFRTMRGLGVKPNEITF+GILTACS
Sbjct: 557 CARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFLGILTACS 616
Query: 604 HIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDPDIVVW 663
HIGMVEEGLKLYRTMQE+ ISPTKEHCSC+VDLLARAGCLD AE+FIK MPF PD+VVW
Sbjct: 617 HIGMVEEGLKLYRTMQEDCRISPTKEHCSCIVDLLARAGCLDVAEEFIKQMPFVPDVVVW 676
Query: 664 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRSSMRQM 723
KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAA+VMLCNIHASSG WKD AQ R SMR+M
Sbjct: 677 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDLAQLRISMRRM 736
Query: 724 NVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDPIKV 778
+V KVPGQSWIEIKDKVHVFLAED+LHPERGKIYTMLEELMLQ LDD CDP+++
Sbjct: 737 DVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQTLDDSCDPLQM 790
BLAST of Lsi03G020440 vs. NCBI nr
Match:
XP_023526527.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023526528.1 pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023526529.1 pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1390.9 bits (3599), Expect = 0.0e+00
Identity = 674/775 (86.97%), Postives = 720/775 (92.90%), Query Frame = 0
Query: 3 TSDAIVFFNPFSPTTSTKNFKPQLHLALSHIRLNTQLAFSPFPVTDHYSHDDKLISLCKK 62
+S+AIVFFNP SP S KNFKPQLHLALSHIRLN+Q+AFSP PV +H S+DD +ISLCKK
Sbjct: 44 SSEAIVFFNPCSPANSIKNFKPQLHLALSHIRLNSQIAFSPSPVAEH-SYDDNIISLCKK 103
Query: 63 NCHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMIL 122
HREALQAFDIFQKCSNSPL SITYTHLI+ACSSLRSLEHGRKIH HM TFNYQPD+IL
Sbjct: 104 KLHREALQAFDIFQKCSNSPLNSITYTHLIHACSSLRSLEHGRKIHCHMSTFNYQPDLIL 163
Query: 123 QNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSGY 182
QNHILNMYGKCGSLKEARNIFDAMPLKN VSWTSMISGYSHYGQ+DNAI LYVQMLRSG+
Sbjct: 164 QNHILNMYGKCGSLKEARNIFDAMPLKNAVSWTSMISGYSHYGQDDNAITLYVQMLRSGH 223
Query: 183 IPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADAKN 242
IPDHFTFGSVVKSCSGLDD MLARQLHAHVLKSEFG + IAQNALISMYTK SQ+ADA N
Sbjct: 224 IPDHFTFGSVVKSCSGLDDLMLARQLHAHVLKSEFGGNPIAQNALISMYTKFSQIADATN 283
Query: 243 VFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSKLL 302
VFSHII K+LISWGSMIAGFSQLGYE+EALCHFREMLSQP+YQPNEFVFGSAFSACS L
Sbjct: 284 VFSHIITKNLISWGSMIAGFSQLGYEIEALCHFREMLSQPIYQPNEFVFGSAFSACSNLS 343
Query: 303 EPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSIIA 362
EPN GRQIHGLCIKFGLG D FAGCSLCDMYAKCGFLGSARTVF IEKPDLVAWN+IIA
Sbjct: 344 EPNCGRQIHGLCIKFGLGRDRFAGCSLCDMYAKCGFLGSARTVFCQIEKPDLVAWNAIIA 403
Query: 363 GFASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGFDL 422
GFASVGDAKESLSFFS+MRHTGL NDVTVLSLLCACSEP+MLNQGMQVHSYIV+ GFDL
Sbjct: 404 GFASVGDAKESLSFFSQMRHTGLASNDVTVLSLLCACSEPMMLNQGMQVHSYIVKTGFDL 463
Query: 423 DIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLTKLM 482
++PVCN LLSMYSKCS+LND+L+IFE IGNKAD+VSWNTMLT C QNQAGEVLRL KLM
Sbjct: 464 EVPVCNGLLSMYSKCSDLNDSLKIFEDIGNKADVVSWNTMLTVCRLQNQAGEVLRLMKLM 523
Query: 483 LASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKCGSL 542
LAS IK D VTLTNVLVSSGQIASYEVGSQVHCFIMKSG NLDTSVSNALINMY KCGSL
Sbjct: 524 LASRIKSDRVTLTNVLVSSGQIASYEVGSQVHCFIMKSGQNLDTSVSNALINMYMKCGSL 583
Query: 543 GCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGILTAC 602
GCA+KMFDSID+PD+ISWSSLIVGYAQAGCGEEAF+LFRTMRGLG++PNEITF+GILTAC
Sbjct: 584 GCAQKMFDSIDDPDVISWSSLIVGYAQAGCGEEAFKLFRTMRGLGIRPNEITFLGILTAC 643
Query: 603 SHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDPDIVV 662
HIGMVEEGL+LYRTMQE+ ISPTKEH SC+VDLLARAGCLD AEDFIK MPF+PDIVV
Sbjct: 644 CHIGMVEEGLRLYRTMQEQDGISPTKEHYSCIVDLLARAGCLDAAEDFIKKMPFEPDIVV 703
Query: 663 WKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRSSMRQ 722
W TLLAACK+HGNLEVGKRAAENVLK DPSNSAALVMLCNIHASSG WKDFA+ R SMR+
Sbjct: 704 WMTLLAACKLHGNLEVGKRAAENVLKNDPSNSAALVMLCNIHASSGRWKDFARIRRSMRR 763
Query: 723 MNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDPIKV 778
M+VSKVPGQSWIEIKD+VHVF AEDSLHPERG+IYTMLEELMLQVLDD CDP+++
Sbjct: 764 MDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQVLDDSCDPLQM 817
BLAST of Lsi03G020440 vs. NCBI nr
Match:
XP_022934158.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like [Cucurbita moschata] >XP_022934159.1 pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like [Cucurbita moschata] >XP_022934160.1 pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 1384.4 bits (3582), Expect = 0.0e+00
Identity = 674/776 (86.86%), Postives = 720/776 (92.78%), Query Frame = 0
Query: 3 TSDAIVFFNPFSPTTSTKNFKPQLHLALSHIRLNTQLAF-SPFPVTDHYSHDDKLISLCK 62
+S+AIVFFNP SP TS KNFKPQL LALSHIR ++ LA P PVT+H S+DD +ISLCK
Sbjct: 44 SSEAIVFFNPCSPATSIKNFKPQLRLALSHIRFSSLLASPPPSPVTEH-SYDDNIISLCK 103
Query: 63 KNCHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMI 122
K HREALQAFDIFQKCS+SPL SITYTHLI+ACSSLRSLEHGRKIH HM TFNYQPD+I
Sbjct: 104 KKLHREALQAFDIFQKCSSSPLNSITYTHLIHACSSLRSLEHGRKIHCHMSTFNYQPDLI 163
Query: 123 LQNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSG 182
LQNHILNMYGKCGSLKEARNIFDAMPLKN VSWTSMISGYSHYGQ+DNAI LYVQMLRSG
Sbjct: 164 LQNHILNMYGKCGSLKEARNIFDAMPLKNAVSWTSMISGYSHYGQDDNAITLYVQMLRSG 223
Query: 183 YIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADAK 242
+IPDHFTFGSVVKSCSGLDD MLARQLHAHVLKSEFG + IAQNALISMYTK SQ+ADA
Sbjct: 224 HIPDHFTFGSVVKSCSGLDDLMLARQLHAHVLKSEFGGNPIAQNALISMYTKFSQIADAT 283
Query: 243 NVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSKL 302
NVFSHIIIKDLISWGSMIAGFSQLGYE+EALCHFREMLSQ +YQPNEFVFGSAFSACS L
Sbjct: 284 NVFSHIIIKDLISWGSMIAGFSQLGYEIEALCHFREMLSQAIYQPNEFVFGSAFSACSSL 343
Query: 303 LEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSII 362
EPN GRQIHGLCIKFGLGSD FAGCSLCDMYAKCGFLGSARTVF IEKPDLVAWN+II
Sbjct: 344 SEPNCGRQIHGLCIKFGLGSDRFAGCSLCDMYAKCGFLGSARTVFCQIEKPDLVAWNAII 403
Query: 363 AGFASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGFD 422
AGFASVGDAKESLSFFS+MRHTGL NDVTVLSLLCACS+P+MLNQGMQVHSYIV+ GFD
Sbjct: 404 AGFASVGDAKESLSFFSQMRHTGLASNDVTVLSLLCACSDPMMLNQGMQVHSYIVKTGFD 463
Query: 423 LDIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLTKL 482
L++PVCN LLSMYSKCS LND+L+IFE IGNKADIVSWNTMLTAC QNQAGEVLRL KL
Sbjct: 464 LEVPVCNGLLSMYSKCSVLNDSLKIFEDIGNKADIVSWNTMLTACRLQNQAGEVLRLMKL 523
Query: 483 MLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKCGS 542
MLASHIK D VTLTNVLVSSGQIASYEVGSQVHCFIMKSG NLDTSVSNALINMY KCGS
Sbjct: 524 MLASHIKSDRVTLTNVLVSSGQIASYEVGSQVHCFIMKSGQNLDTSVSNALINMYMKCGS 583
Query: 543 LGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGILTA 602
LGCARKMFDSI++PD+ISWSSLIVGYAQAGCGEEAFELFRTMRGLG++PNEITF+GILTA
Sbjct: 584 LGCARKMFDSINDPDVISWSSLIVGYAQAGCGEEAFELFRTMRGLGIRPNEITFIGILTA 643
Query: 603 CSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDPDIV 662
C HIGMVEEGL+LYRTMQE+ ISPTKEHCSC+VDLLARAGCLD AEDFIK MPF+PDIV
Sbjct: 644 CCHIGMVEEGLRLYRTMQEQDGISPTKEHCSCIVDLLARAGCLDAAEDFIKKMPFEPDIV 703
Query: 663 VWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRSSMR 722
VW TLLAACK+HGNLEVGKRAAENVLK DPSNSAALVMLCNIHASSG WKDFA+ R SMR
Sbjct: 704 VWMTLLAACKLHGNLEVGKRAAENVLKNDPSNSAALVMLCNIHASSGHWKDFARLRRSMR 763
Query: 723 QMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDPIKV 778
+M+VSKVPGQSWIEIKD+VHVF AEDSLHPERG+IYTMLEELM+Q+LDD CDP+++
Sbjct: 764 RMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMVQILDDSCDPLQM 818
BLAST of Lsi03G020440 vs. TAIR 10
Match:
AT3G53360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 896.0 bits (2314), Expect = 2.2e-260
Identity = 426/722 (59.00%), Postives = 552/722 (76.45%), Query Frame = 0
Query: 53 DDKLISLCKKNCHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHML 112
+D + SLCK N +REAL+AFD QK S+ ++ TY LI ACSS RSL GRKIH H+L
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 113 TFNYQPDMILQNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIA 172
N + D IL NHIL+MYGKCGSL++AR +FD MP +N+VS+TS+I+GYS GQ AI
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 173 LYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYT 232
LY++ML+ +PD F FGS++K+C+ D L +QLHA V+K E SHLIAQNALI+MY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 233 KLSQMADAKNVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFG 292
+ +QM+DA VF I +KDLISW S+IAGFSQLG+E EAL H +EMLS V+ PNE++FG
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 293 SAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKP 352
S+ ACS LL P+YG QIHGLCIK L + AGCSLCDMYA+CGFL SAR VF IE+P
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 353 DLVAWNSIIAGFASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVH 412
D +WN IIAG A+ G A E++S FS+MR +G +P+ +++ SLLCA ++P+ L+QGMQ+H
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 413 SYIVRMGFDLDIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQA 472
SYI++ GF D+ VCNSLL+MY+ CS+L +FE N AD VSWNT+LTACLQ Q
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 473 GEVLRLTKLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNAL 532
E+LRL KLML S +PDH+T+ N+L +I+S ++GSQVHC+ +K+GL + + N L
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 533 INMYTKCGSLGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNE 592
I+MY KCGSLG AR++FDS+DN D++SWS+LIVGYAQ+G GEEA LF+ M+ G++PN
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 593 ITFVGILTACSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIK 652
+TFVG+LTACSH+G+VEEGLKLY TMQ E+ ISPTKEHCSC+VDLLARAG L+ AE FI
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 653 HMPFDPDIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKD 712
M +PD+VVWKTLL+ACK GN+ + ++AAEN+LKIDP NS A V+LC++HASSG W++
Sbjct: 635 EMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEN 694
Query: 713 FAQYRSSMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGC 772
A RSSM++ +V K+PGQSWIEI+DK+H+F AED HPER IYT+L + Q+LD+ C
Sbjct: 695 AALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDE-C 754
Query: 773 DP 775
+P
Sbjct: 755 NP 755
BLAST of Lsi03G020440 vs. TAIR 10
Match:
AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 471.9 bits (1213), Expect = 1.0e-132
Identity = 237/730 (32.47%), Postives = 401/730 (54.93%), Query Frame = 0
Query: 45 PVTDHYSHDDKLISLCKKNCHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHG 104
P + Y + + + K EAL+ + ++ SP K T+ +I AC+ L E G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDK-YTFPSVIKACAGLFDAEMG 126
Query: 105 RKIHRHMLTFNYQPDMILQNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHY 164
++ +L ++ D+ + N +++MY + G L AR +FD MP++++VSW S+ISGYS +
Sbjct: 127 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 186
Query: 165 GQEDNAIALYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQ 224
G + A+ +Y ++ S +PD FT SV+ + L + LH LKS S ++
Sbjct: 187 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 246
Query: 225 NALISMYTKLSQMADAKNVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVY 284
N L++MY K + DA+ VF + ++D +S+ +MI G+ +L E++ F E L Q +
Sbjct: 247 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--F 306
Query: 285 QPNEFVFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSART 344
+P+ S AC L + + + I+ +K G + L D+YAKCG + +AR
Sbjct: 307 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 366
Query: 345 VFYHIEKPDLVAWNSIIAGFASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVM 404
VF +E D V+WNSII+G+ GD E++ F M + +T L L+ +
Sbjct: 367 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 426
Query: 405 LNQGMQVHSYIVRMGFDLDIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLT 464
L G +HS ++ G +D+ V N+L+ MY+KC + D+L+IF +G D V+WNT+++
Sbjct: 427 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVIS 486
Query: 465 ACLQQNQAGEVLRLTKLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNL 524
AC++ L++T M S + PD T L +A+ +G ++HC +++ G
Sbjct: 487 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 546
Query: 525 DTSVSNALINMYTKCGSLGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMR 584
+ + NALI MY+KCG L + ++F+ + D+++W+ +I Y G GE+A E F M
Sbjct: 547 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 606
Query: 585 GLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCL 644
G+ P+ + F+ I+ ACSH G+V+EGL + M+ Y I P EH +C+VDLL+R+ +
Sbjct: 607 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 666
Query: 645 DGAEDFIKHMPFDPDIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIH 704
AE+FI+ MP PD +W ++L AC+ G++E +R + +++++P + ++ N +
Sbjct: 667 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 726
Query: 705 ASSGCWKDFAQYRSSMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELM 764
A+ W + R S++ +++K PG SWIE+ VHVF + D P+ IY LE L
Sbjct: 727 AALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 786
Query: 765 LQVLDDGCDP 775
+ +G P
Sbjct: 787 SLMAKEGYIP 792
BLAST of Lsi03G020440 vs. TAIR 10
Match:
AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 471.1 bits (1211), Expect = 1.7e-132
Identity = 248/719 (34.49%), Postives = 410/719 (57.02%), Query Frame = 0
Query: 66 REALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDMILQNH 125
R A+ A D+ + P+ S+T++ L+ +C R G+ +H ++ F+ +PD +L N
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 126 ILNMYGKCGSLKEARNIFDAM---PLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRSGY 185
++++Y K G +A ++F+ M ++VVSW++M++ Y + G+E +AI ++V+ L G
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 186 IPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKS-EFGSHLIAQNALISMYTK-LSQMADA 245
+P+ + + +V+++CS D + R ++K+ F S + +LI M+ K + +A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 246 KNVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSK 305
VF + ++++W MI Q+G+ EA+ F +M+ ++ ++F S FSAC++
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAE 282
Query: 306 LLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKC---GFLGSARTVFYHIEKPDLVAW 365
L + G+Q+H I+ GL D+ CSL DMYAKC G + R VF +E +++W
Sbjct: 283 LENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 342
Query: 366 NSIIAGF-ASVGDAKESLSFFSRMRHTGLV-PNDVTVLSLLCACSEPVMLNQGMQVHSYI 425
++I G+ + A E+++ FS M G V PN T S AC G QV
Sbjct: 343 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 402
Query: 426 VRMGFDLDIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEV 485
+ G + V NS++SM+ K + DA + FE + K ++VS+NT L + +
Sbjct: 403 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQA 462
Query: 486 LRLTKLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINM 545
+L + + T ++L + S G Q+H ++K GL+ + V NALI+M
Sbjct: 463 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 522
Query: 546 YTKCGSLGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITF 605
Y+KCGS+ A ++F+ ++N ++ISW+S+I G+A+ G E F M GVKPNE+T+
Sbjct: 523 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 582
Query: 606 VGILTACSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMP 665
V IL+ACSH+G+V EG + + +M E++ I P EH +CMVDLL RAG L A +FI MP
Sbjct: 583 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 642
Query: 666 FDPDIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQ 725
F D++VW+T L AC+VH N E+GK AA +L++DP+ AA + L NI+A +G W++ +
Sbjct: 643 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 702
Query: 726 YRSSMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDDGCDP 775
R M++ N+ K G SWIE+ DK+H F D+ HP +IY L+ L+ ++ G P
Sbjct: 703 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVP 757
BLAST of Lsi03G020440 vs. TAIR 10
Match:
AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 469.2 bits (1206), Expect = 6.6e-132
Identity = 245/712 (34.41%), Postives = 390/712 (54.78%), Query Frame = 0
Query: 61 KKNCHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGRKIHRHMLTFNYQPDM 120
K+ C A++ F +K S +S T +++A + +L+ G +H + ++
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRS-TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 363
Query: 121 ILQNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNAIALYVQMLRS 180
+ + +++MY KC ++ A +F+A+ KN V W +MI GY+H G+ + L++ M S
Sbjct: 364 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 423
Query: 181 GYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISMYTKLSQMADA 240
GY D FTF S++ +C+ D + Q H+ ++K + +L NAL+ MY K + DA
Sbjct: 424 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 483
Query: 241 KNVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFVFGSAFSACSK 300
+ +F + +D ++W ++I + Q E EA F+ M + S AC+
Sbjct: 484 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA-CLASTLKACTH 543
Query: 301 LLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIEKPDLVAWNSI 360
+ G+Q+H L +K GL DL G SL DMY+KCG + AR VF + + +V+ N++
Sbjct: 544 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL 603
Query: 361 IAGFASVGDAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQGMQVHSYIVRMGF 420
IAG+ S + +E++ F M G+ P+++T +++ AC +P L G Q H I + GF
Sbjct: 604 IAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF 663
Query: 421 DLDIPVCN-SLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACLQQNQAGEVLRLT 480
+ SLL MY + +A +F + + IV W M++ Q E L+
Sbjct: 664 SSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFY 723
Query: 481 KLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTSVSNALINMYTKC 540
K M + PD T VL ++S G +H I +LD SN LI+MY KC
Sbjct: 724 KEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC 783
Query: 541 GSLGCARKMFDSI-DNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLGVKPNEITFVGI 600
G + + ++FD + +++SW+SLI GYA+ G E+A ++F +MR + P+EITF+G+
Sbjct: 784 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 843
Query: 601 LTACSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGAEDFIKHMPFDP 660
LTACSH G V +G K++ M +Y I +H +CMVDLL R G L A+DFI+ P
Sbjct: 844 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP 903
Query: 661 DIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASSGCWKDFAQYRS 720
D +W +LL AC++HG+ G+ +AE +++++P NS+A V+L NI+AS GCW+ R
Sbjct: 904 DARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRK 963
Query: 721 SMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQVLDD 771
MR V KVPG SWI+++ + H+F A D H E GKI LE+L + DD
Sbjct: 964 VMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDD 1012
BLAST of Lsi03G020440 vs. TAIR 10
Match:
AT4G39530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 465.7 bits (1197), Expect = 7.3e-131
Identity = 249/720 (34.58%), Postives = 408/720 (56.67%), Query Frame = 0
Query: 56 LISLCKKN-CHREALQAFDIFQKCSNSPLKSITYTHLINACSSLRSLEHGR----KIHRH 115
++S C + + E+L F F + + I ACS L GR ++
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSF 175
Query: 116 MLTFNYQPDMILQNHILNMYGKCGSLKEARNIFDAMPLKNVVSWTSMISGYSHYGQEDNA 175
++ + D+ + +++ Y K G++ AR +FDA+P K+ V+WT+MISG G+ +
Sbjct: 176 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 235
Query: 176 IALYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGSHLIAQNALISM 235
+ L+ Q++ +PD + +V+ +CS L +Q+HAH+L+ N LI
Sbjct: 236 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 295
Query: 236 YTKLSQMADAKNVFSHIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQPVYQPNEFV 295
Y K ++ A +F+ + K++ISW ++++G+ Q EA+ F M S+ +P+ +
Sbjct: 296 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYA 355
Query: 296 FGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYHIE 355
S ++C+ L +G Q+H IK LG+D + SL DMYAKC L AR VF
Sbjct: 356 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 415
Query: 356 KPDLVAWNSIIAGFASVG---DAKESLSFFSRMRHTGLVPNDVTVLSLLCACSEPVMLNQ 415
D+V +N++I G++ +G + E+L+ F MR + P+ +T +SLL A + L
Sbjct: 416 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 475
Query: 416 GMQVHSYIVRMGFDLDIPVCNSLLSMYSKCSNLNDALQIFEGIGNKADIVSWNTMLTACL 475
Q+H + + G +LDI ++L+ +YS C L D+ +F+ + K D+V WN+M +
Sbjct: 476 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYV 535
Query: 476 QQNQAGEVLRLTKLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLDTS 535
QQ++ E L L + S +PD T N++ ++G +AS ++G + HC ++K GL +
Sbjct: 536 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 595
Query: 536 VSNALINMYTKCGSLGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFELFRTMRGLG 595
++NAL++MY KCGS A K FDS + D++ W+S+I YA G G++A ++ M G
Sbjct: 596 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 655
Query: 596 VKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEYDISPTKEHCSCMVDLLARAGCLDGA 655
++PN ITFVG+L+ACSH G+VE+GLK + M + I P EH CMV LL RAG L+ A
Sbjct: 656 IEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKA 715
Query: 656 EDFIKHMPFDPDIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHASS 715
+ I+ MP P +VW++LL+ C GN+E+ + AAE + DP +S + ML NI+AS
Sbjct: 716 RELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASK 775
Query: 716 GCWKDFAQYRSSMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTMLEELMLQV 768
G W + + R M+ V K PG+SWI I +VH+FL++D H + +IY +L++L++Q+
Sbjct: 776 GMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9LFI1 | 3.1e-259 | 59.00 | Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... | [more] |
| Q9SS60 | 1.4e-131 | 32.47 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... | [more] |
| Q5G1T1 | 2.5e-131 | 34.49 | Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... | [more] |
| Q9SS83 | 9.3e-131 | 34.41 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
| Q9SVA5 | 1.0e-129 | 34.58 | Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LDF3 | 0.0e+00 | 91.34 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736910 PE=4 SV=1 | [more] |
| A0A5A7TPL0 | 0.0e+00 | 91.09 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3B684 | 0.0e+00 | 91.09 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Cucumis ... | [more] |
| A0A6J1F1S7 | 0.0e+00 | 86.86 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like OS=Cuc... | [more] |
| A0A6J1J911 | 0.0e+00 | 86.45 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like OS=Cuc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038903429.1 | 0.0e+00 | 93.43 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 ... | [more] |
| XP_004137966.1 | 0.0e+00 | 91.34 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucumis sa... | [more] |
| XP_008442662.1 | 0.0e+00 | 91.09 | PREDICTED: pentatricopeptide repeat-containing protein At3g53360, mitochondrial ... | [more] |
| XP_023526527.1 | 0.0e+00 | 86.97 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucurbita ... | [more] |
| XP_022934158.1 | 0.0e+00 | 86.86 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like [Cucur... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G53360.1 | 2.2e-260 | 59.00 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G03580.1 | 1.0e-132 | 32.47 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G49170.1 | 1.7e-132 | 34.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G09040.1 | 6.6e-132 | 34.41 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G39530.1 | 7.3e-131 | 34.58 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
