Lsi03G019570 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G019570
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	cactin
Location	chr03: 30985417 .. 30997834 (-)
RNA-Seq Expression	Lsi03G019570
Synteny	Lsi03G019570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGTAGCAAAGTTTTTCTTTTCTGACTTCCAGTAAGGGCTATTTGGAAATGGAAATTTCTTGTCATAAAGTGTGCTATTTAATTCTCATTTCATTTTGTTTTTTGAGAGGGAGATTCCTTTCCCCCTGCCCCAGTTTGTTCCCTTTTTTGGTTTCAATATACTTCACATGTTACTTACATGAATGTTCTCAAGTAACTGATGAATTCCTATTTATGGATCAGATTTGTTCTCTATTTTCGTTGTTTGTGGTTTATGTGTGGTGATTTGGTTCTATATGTTGTTTTCACTGACCAGGTGTATATGATATGCATTCAATTAGCTCCTCGTATTGTTACTGACATGTGTGAAGCAGGGCTTGACTGTGAAAGAAATGGAAGAGCTTCGTGATGACATCAAAATGCATCTTGATCTGGACAGGGCCACACCTACACATATCGAGTATTGGGAGGTGAGAATATTTATTGATTTTCCTGTTTACATTTTGAAAAGCTTCTATGTTGAACTACATGCCTCAATGGAGTGTTAACTGTTAACAACTAGTTCTTAACCCCTTCCTTTGAAAGAGTAACACCTACACATTGAGACTTGAGAGTGTGTTCTCTGTGTCATTTGATTCGTTATTTTGAAATATTCCTCTGAACCTTTACAAATATTTCCAGATATAATGCAACCTTTGATATGTTTTACTCAATATTAGTGTAACTGATATAGATTCAGTTTCAGTGCTCACTTTCCTGGTCTTTCCTATCAGAGTAAGGTGTAGCATCTGTCTGCTAAGCTAAGCAATATCTTTGCTGTGTGCAATTTAACAGGCACTTCTTGTGGTTTGTGATTGGGAACTAGCTGAAGCTCGGAAGAAGGATGCTCTGGATAGAGCCAGAGTTCGTGGTGAGGAGCCTCCTGCTGAGTTGCTTGCAGAAGAAAGGGGTCTGCATTCTAGCATTGAAACAGATGTCAAAAATCTGCTGGAAGGAAAGACTTATGGTGAATTGGAGGCATTACAATCTCAAATTGAGTCACAGATGCGATCTGGAACAGCAAAGGTGGTTGAGTACTGGGAGGCTGTCCTAAAGCGCCTTCATATATACAAGGCCAAGGTAATCATCGTTAGATGTTCCTTTTGTATGTCATCTATTCTACTTTTAAAGCTAATGAATTAGACTCATTATTGTTTTTCATATGCAGGCTTGCTTGAAGGAAATTCATACGAAAAAACTACATGAGCATCTTGTACGTCTTGAGCAACCTTTCGAGGATGATGAAGAACAGATGGAGCAAGAAGTCAAGATGGAAACTGACCATTCTTTACAAGTGAAAGCTGATGATGATGAGCATGATATTGAAGGTATGGTCCAGCGTCTTTATTTTGCAACCTTGAATTTTTTGCCCAGAGTCTAATATATATTTTTCTGCTCTCTAGAACCCCAAACATATTCGCCTGATCTCCTTGAGGAAGAAGATAATCAAGAGGCAGGATCATTTTCACCAGAACTTATGCATGGTGATGAAGATGAAGAGGCAGTTGATCCTGAGGAGGATAGGGCCATACTGGTATCTCTGCAGATATTATATTCACTATCTATATATTGTAATGGATGCCAAAAGTTAGATTGTTATGACTTGGTAAATTCTGCAGGAACGTAAGCGTATTGCTGTCTTAGAAGAACAGCAGAGACGGATTCAAGAAGCAATGGCTACAAAACCTGCTCCAGTAGAGGATAATTTTGAACTGAAAGCCTCAAAAGCCATGGGAATCATGGAGGAAGGCGATGCAGTTTTTGGATCTGGTGCTGAAGTGAACCTAGATTCACAGGTGCCCTGTCATTTTTCATTTTCTGTCTGCTTCCTACCTAGATTGTTTATGCTCCTACATTTTTTGACAGTGTTCTTAATTTGTGCCTCTAAAAAATATGCAGGTTTATTGGTGGCATGATAAATATCGTCCGAGAAAACCAAAATACTTCAATCGGGTTCATACGGGATATGAGTGGAACAAGTACAACCAGACTCACTACGATCATGACAATCCACCTCCAAAGATTGTGCAAGGATATAAATTTAACATCTTCTACCCAGACCTTGTTGACAAGACAAAAGCTCCAACTTACACCATTGAAAAGGATGGAAACAGCAGTGAGACATGTATCATACGGTTCCATGCGGGGCCACCGTATGAGGATATCGTAAGTCTGCTTTGGATCTGCAATTGAGTTTTTTGACATCTAGTTTTATTTTATTTATCCATACTTTAACTACATCATTTCCTTTAATTTTATTACAGGCATTCCGAATTGTAAACAAAGAATGGGAGTATTCTCATAAGAAGGGGTTCAAGTGCACATTTGAGCGTGGAATTTTGCACGTATACTTCAACTTTAAACGATATCGTTATCGCAGGTAACACAAGGCTAGTCATGGCAGTTGTCACTTACGATGGTGCACGTTGCTCTGTTACGATCTCCTTCAAGTGCTCGGTTGTAACTTCACCAACTAAATTAAAAGCAATGATTGCAAAATTTTCCTTGTAAGTTGATGATATGAGTAAAATATTTACTATTCCAAAACATCAAGCTGTAAATACTCAATAGTAGGTCCTGAAAATTTTGAAATAATTGCTTCAGCCTTCACTTTCAGGCATTTTTCCTCTCAGCTGCCAAGGTTTGATGCTCCAACCTTCCTAATCTTTTGTTTTTTTCTACTACTGTTTTAGTTTTTCTTATTCATATATTTCATGAAATGGTAATTGGGTTGGCTAGTTTATGCCCACTTGACCTCCATAAATGGACTAGTGGAAAAAATTACTAAAAGCATCCATTTTACCATTCACAATTCTTTAACCCCACTTCCAGAAAGCACTTGATTATTTTTTATTTTGTTATATATATATTTTGAGTTAGATATTTAGTTATTGTTGAGGCTATCAAATTTTTAGGTTATCATATTGCTCTTGACTAATCCCATCTTAAAAAAGTGCCTTTTATCTCTATTCATATGGCCATAAAAGACAAACATCTCCGTCTCTATAAATAGTAGGTTGCCTAACACATTCTTGAAATAAAATTTTATTATTATTATTAGTAAATACTTGTTTGACAAAGATTGATAAAAAGAATATGATATTCTAGTGGAAGACGGACGATTCTTTCTTTATTTTATTTTTAGAATATTACTAATGTGGGGAATTAAATTTAAGCTTACTATTAATGATCAATAATGAACTATGTTTAGATCAGTAAAATAAATTAAACGATGTTCCTGCCTGTAGTACAAATATTAAATTTATGCAAAGAAAAATATGATTTGCAAAATTTCAACAAATTTCGCCTCATTGAATTAAAGTGGTAATGCCAACTCAATCGTCAAATGTTTTTAGATGATTGGAAATCACTTTCATGAACATGTTTTTTAACCATTCAACATCAATTTAATGTGGAGTTTTATATTCTTTAAATGTAATTTTTATGCCATTAAAATTAGTTTTAAATTATTAAATTTTTTTTACAAGTGATTTTGAACTTGACAAAAAGGTTCAACATGTAAAATGTGTTGGGTTAAAATATTATTTTGGGCTATCTTCTTTGAGATTTCTTATCTATTTTAATTTTTCTATTTTTAAGTGTCTAAAATAAATTTAGTATTTGTACTTTTAATGAGTATTAAAAATAGTTATGGTTATTATAAAATAAGAGGATAAAGAACAAAGTAGGGAGAAGAGAAAGTAGAGACTGAATGTATTCTCTATTCAATCGTGTTTTTCAAAGGTCCCAATGACCACTATTTATAGAGTTTACAAGATCTGGAAAAGCTAAATACAAGGAAAAGATAAAGGGAAATATATTGGAAATAATATCTATGGACATCTATATCTAATTCAAATATTTATAACACTCCCCCTTATTCGTATACTTTAGCAACGGCCTCATTAAAAACCTTGCTAGGAAAACCCGGTGGGACAAAACCATAGTCAAGGGAAAAAGAGTGCAGCAATTCTACTCCCCCTCATGAATATATCACTTGAGTTCTCTGAGTCGTCGCATTCCAATGTTGTGCACCAACTTTTCAAATGTCGGTGTGGGTAATGCCTTTGTAAATAAGTCTGCCAAGTTGTCTTTTGAGGAAATTTGTTGAACACTAATGTCACCATTTTCTTCGAGGTCATGCGTGTAGAAGAGTTTTGGTGAGATATGTTTTGTTCTATCTCCTTTTATATACCCTCCTTTGATTTGGGTTATACATGCTGTATTGTCTTCATATAATATTGTTGGTAAAAGTTTTCCAGAAGACAAGCCACATGTTTCTCGAATGTGATGAGTCATTGACCTCAACCATACACATTCTCTACTAGCTTCATGAATTGCAAGAATTTCTGCATGATTTGAGGAAGTGGCTGTAATGGTCTGTTTTACAGACCGCCAAGATATAGCAGTTCCTCCACATGTAAACAGATAACCTGTTTGAGATCTAGCTTTGTGTGGATCAGATAAATATCCAGCATATGCATAACCAACTAGATCAAAATTTGATTTGTTTGAATAAAACAAACCCATATCAACCGTTCCTTGAAGATAACGGAGTACATGCTTAATTCCGTTCCAATGTCTTTTTGTTGGAGAAGAACTGTATCTTGCTAATAAATTCACTGAGAATGCTATATCTGGTCTTGTGTTGTTAGCAAGATACATTAGTGCACCTATTGCACTAAGATATGGTACTTCAGGACCAAGTAGTTCTTCATTATCTTCTCGAAGTCGAAAGATGTCCTTTTTCACGTCTAGTGATCGAACTACTATTGGAATGTTCAATGGATGTGCTTTGTCCATGTAAAATCTTTTTAAAATCTTTTTTGTATATGTCGATTGATGAATAAAAATTTCATCACCTAAATGTTCAATTTGCAAGCCAAGGCAAAATTTTGTTTTGCCAAGATCTTTCATCTCAAATTCTTTTTGAGATAGTTTATTGCCTTTGAAAGTTCTTCAGGAGTTCCAATTATATTTAAATCATCAACATATACATCTATAATAGCAAATCCTGATTGTGATTTCTTAATAAACACACATGGACAAATTGGATTATTTTGATAACCTTCTTTCAATAAATATTCACTTAGACGATTGTACCACATTCGTCCTGATCATTTTAATCCATATAATGATCTCTGTAGTTTGATTGAATATAATTCTTTAGATTTTGAATTATATGATTCGGGTATCTTAAATCCTTCAAGGATTTTCATATAGATTTCATTTTCTAGAGATCCATATAGATATGCTGTGACTACATCCATAAGATGCATGTTAAGTTTTTCATATACAGGCTAATTAAATATCTTAATGTAATAGCGTCCACCACAGGTGAATATGTTTCCTCATAATCAATGCCTAGTTTTTGAGAAAATCCTTGTGCAACCAATCGTGCTTTGTATCTCGTGACCTCATTATTTTTATTTCTTTTACGTACAAATACCCATTTGTATCCCACAGGTTTTACACCTTTAGGTGTATGGACTACAGGTCCAAAAACTTCACGTTTTGAAAGTGAGTTTAATTCTGCTTAGATGGCTTCTTTCCACTTAAGCCAATCCTTTCTATGGCGACATTCTTCAACAGATCAAGGTTCATAATTCTCATTTTCATGTATAATATCATGAGCAACAGTATAAGCGAAAGTGTTGTCTATGACTACATCAGTTCTATTCCATCTTTTTCCTGTCATTACATAATTTATCGAGATCTCACTGTTATCTTCATATAATTGAGTCTCTTCAACATTTTTAGCAATAGTCATGTCTGGAGATCCTTTTTTTAATCTTCTCATTTTTAATTGAGTCATTTTGACTATTGATTACTTTTCTTTTTCGAGGATTTTTATCTTTTGAACCTATTGGTCTACCACGCTTCTGGCATACCGTTGACTCATTAGTTGTAACAACTTGCTGAGTTGGAAATTCAATTCTAGATGGAGCATTTGCAGCTGGAATATATGACTTGGTCACTTTCTTAACATCTATAAAAGCATCTGACATTTTGTTTGCTATGTTTTGTAAATGAATTATTTTTCGAACTTCCAGTTCGCATTGATCTGTACGAAGGTCTAAATGAGACAATAACGATGCGTTCCAGGCAATTTCATTTTCCAACTTCTTGATTCCTCCCCCTAATGTTGGAAAAGTTGTCTCATTAAAATGACAATCAGCAAATCGTGCAGTAAATACATCACCCGTCAGGGGTTCAAGATATCTAATAATTGATGGGGAATCAAATCCAACATATATTCCTAATCTCCTTTGAGGTCCCATTTTAGTACGTTGTGGTGTGGCAATTGGAATATATACTGCACAACAAAAAATTCGCAAATGTGAAATATTTGACTCTTGACCATAAGCTAATTGCACTGGGGAGTACTTATGATAAGATGTCGGTCTTATGCGTACAAGTGACGCTGCATGCAAAATAGCATGACCCCATACATATATTGGAAGTTTTGCTCTCATAAGTAATGGTCTAGCAATTAATTGTAAACGTTTGATGAATGATTCTGCTAATCCATTTTGTGTATGAACATACGCTACAGGATGTTCAATACTTATCCCAATTGACATACAATAATTATTAAATGCTTGGGATATAAACTCACCAGCATTATCAAGTCGAATGCTTTTGATTGTATAATCAGGCAACTGTGCCCTTAATTTGATTATTTGAGCAAGTAATCTTGCAAATGCAAGGTTTCGACTTGATAATAAACACACATGTGACCATCTACTGGATGCGTCAATTAAAACCATGAAATATCTAAATGGTCCACTTGGTGGATTAATAGGTCCACATATGTCACCATGAATTCGTTCTAAAAATGTAGGTGACTCAATTCCCACTTTAGTTGGTGATGGCCTAATTATTAATTTTCCTTGAGAGCAAGCAACACATGATAATTCATTAGATTGAAGAATCTTCTGGTTCTTTAATGGATGTCCATGTGAATTCTCAATAATTCTTCTCATCATTATTGATCCAGGATGACCCAATCGATCATGTCAAACGATGAATATATCTGGATTCATGAACTTCAGGTTCATTGTTGCGTATGTTTCAATTACTCGTATATGTGTATAATATAATCCAGAAGAAAAAGCAGGCAGTGTTTCCAATATACGTTTTCCATGTGAAACAATAGATGTAATATAGAGATATTCTATATTATTTTTATTGTTAGTTTCAACATGATAACCATTTTGACGTATATCTTTGAAACCCAATAGATTTCTTTTCGATTTATTAGAGAACAAAGTATTACTAATTGTGAATTTTGTTCCTCTAGGTAAAATAAGGTTTGCTTTTCCAAAACCTTCAATCAAGTTTGCAGAACCTAATATTGTAGACATTTGCTTCAAGCATTGTCAATTTAGAAAAATATTTTCTATTTTTAAGTATTGTATGCGTAGTTGCACTATCTGTCAAGCATAGGTCTTCATTAATCTTTGAGTCAGCCAAAATATGAGAAAATGTCCATGATTCTTCATTAAAAAAAAAAACGATTACAATAATTCTCAAAATTAAAGACAAAACTACTATAAATATTCAAAAATTAGCTTGCAAATGTAAAAGAAAGAGAAAACTAGAACAAAACTACTTTGGGACATTATCATAATTAAATGAAGTATTTGCTACTCCTTCAATAGCATCAATTTTCTCTTCAGGAGACTAAAAAAAATCAGCAACATCCAAATGCGTCATGTTGGAAGGGTCAAATACATCACTTGATATGCAAAATTTGCTTCCACATTTTTTCCTTTCTCCTTTAATGAGGCTTGATAGAGATCAACTAAGTGTTTGGACGTACGACAGGTACGAGACCAATGCCCCTTCATACCATATCGGAAGCATTGATTTTCAACACTTTTAAAGCTCTTATTTTGTGGAGTTTTTCTTCTTTGATTATCAGTATTTGTGATTTTCTTGAAATTTGAATAATTATTGCCACGAAAAGAATAGTTATTTCTTCCTCTACTGCGGTCACGACCTCGACCTCGACCTCGACCACGACCACAACCACGACCTCGACCATGATTATTTGAAATTATAACATTCACTTCAGGGAATGGTGTTGCTCCAGTTGGTCGAGACTCATGGTTTTTCATTAATAGCTCATTATTTTGTTCAGCAACAAGAAGACATGATATAAGTTTAGAATACTTTTTAAAACCTCTTTCTCGATATTGCTGCTGCAGGAGCATATTCGAGGCATGAAATATAGAAAATGTCTTCTCTAACATATCTTCATCAGTAATTTTTTCTCCGCATAACAACAATTTTGAACTAATTTTAAATAGTGCAGAATTATAATCACTTACTGATTTAAAATCTTGCAACCTTAGGTGCATCCAATCATAACGAGCTTTAGGAAGAATTACTCTTTTTTGATGATCATACCTTTCCTTTAAATTTTTCCATAGAACATATGGATCTTTTACTATAAGATATTAAATGAATCTAAGTGAATTATTTATCTTATTGAAACAAATCCACTCTAAGAAATAATCTTTAATATTTTAAATCTTTCAAAATAAAATTAAAGATAATCTTGGATATTTATTTTTATATTTGAAAGATAGAATATAATATTTATCAAAAGACAATCTTAACAAATAAGAGATAATATTAATAGGAGAAAATCGTATCTTTATTTAAAAGAAATTCAAATCTTAAGAACAAATATGCAATCCAATTAAAGAAACAAATATCCTAATTTAATTTTTACATATATAACAATTATATACAAAGATATAGAAATATAAACTAATTAGGAAAATATCTCAATCAAATCTTTCAAAGATAAAGATTAAAACTTAAAAATAAGATGCATGATGGCTAACAATTTTAAACATGCATAACATAGTCATAAGAGATTGAGGACAATTTAAATTATCATAATTAAAATTCTAAACCTTCAAAACGACTAAACCTCAAGATTTGATTCAACTATGTTTAGTGGATCACCACACCTAATGGACATCCACAGAAATTGAAGACAATTTAAATTACAACGATTTAAATTCAAGATATTATATCTTTCATCTATTTCAAATATTAAAAAAAAAAAACAGGTTTCTAAAAACTCTAGATTTTAAAAGTGCTTTGAAAAGTTGGCCGCCAAAACTCTTTTACTTACTCAACACCAATATATGCATATACTTCAAATAAACTTCAAGTTGACAATATATACTTATCCAACATAAATATGCATGTTAGGTTGAACCCAAAATTTTAACAATGAATGTCATTAATAATAACACAATTTGATATCAAAAGATTTCTTCTTAGTTAACTTCAAACTAAATTCGGTTGCAAATTTGCAATTCAATGAATTTCATGTGTTAATCAAATTGCAAATCCAATACATTTTAATCAAAAATAAAACTTAAATGTACCATAGCAATCAATTTGCAAACACTTAAATCACATATATGATATTAAAACAAAGTACTCATCTTATTAGTTTTAAATACCTCGATAATATGTAGGCTTTAGCGTTCTTGGTAGAGTCTCAATCTTTGAAGTGGTAGAGTCTCGTGCTGATAACGTATTATAAAACAAGATGATAAAGAACAAAGTAGGGAGAAGAGAAAGTAGAGACTGAATGTATTCTCTATTTAATCGTGTTTTTCAAAGGTCCCAATGACCACTATTTATAGAGTTTACAAGATATGGAAAAGCTAAATACAAAGAAAAGATAAAGGGAAATATATTGGAAATAATATCTATGGACATATATATCTAATTCAAATATTTATAACAATGGTTAATTTTTTAAAAAAAGAGTAATTTAGTCCATATTTGCTCACACGTCATATTTTGTAGTATCTGTGAGAATTTTGCTTTGATATCTTAAAATGGTATTTTACTTCATACAATCTTTTAATAATATGTCGTCATAAATATCTAAACAAGGGAATATTCATAAATCCTAAAATAGAGGCAACATGTTACATTGGTGTCTTCATTTTTTTACAACTCAATACCAAGGAAGAAAAAAAAATTAAGAGCAAACATGCCCCAAAAGTATCCCAAGTTATATAATATGATTATTAGAAGGGAAAAAAAAAGATATATGATTTTAGTTAAAAAGTCACTTTTGGTCTCTGAACATTCGTAGAAGTAATGATTCAATCTCTATCGTGAAAAGTAATATTAAGATTTATTGAAATTTCTTGTCCATGTAGATTGATAAACTTATAAGGGATTAATTTGTGCATAAATTATAAAGACCAAGTTGTTACATGATAAAGCTGACAATTAATTTTGATGATATTTCTTACTACAGGATTAGATTATTACAAATTTGAAAGTAGAAAGACTAGATTGTTACATGATAAAATTTGAGGACTAATGGTTACAAATTTGAAACTACAAAATCTAAGGCTCCGTTTGGTAACCATTTCGTTTTTTGTTTTTGCTTTTGAAAATTAAGCCTATAGACACTACTTCTACTTCCAAATTTCTTCCTTTGTTGTCTAGCTTTTACCAATGGTTTAAAAACCAAGCTATATTTTGAAAACTAAAAAAAATAGCTTTTAAAAACTTGTTTTTATTTTTAAAATTTGGCTAAGAATTCAATCATTGTACTTAAGAAAGATGCAAGTCATGGTAAGAAATGTGGAAGAAATAGACTTAATTTTAAAAAATCAAAAATAAAAACGAAATGCTCTGGGACTAAATTGTTAGACCAAAAGTGAGGGGGCATAACAAAGCTGAAAGATTTTATGCTACTGAATGAATATTTGAGTCTATTCAAAGTGGAAAGGGTCCATTCACATGGCAAGAGAGAAGGGAAGGAAAATGCAAGTGGACCAATTTTGATGTTGATTTGCAAGAAAATACTTTCTCCACAAAGTAAGCATCTGATCCCAATTGTCTATTCCTTACCATCCTAGAATCCATCATTGGCATCTGTCATTCTATTGAGTGTTTCATGGAATCATTCCCATCTCCTTCCCAACCCTTTTCTTAATAATGAATATTCAAAGAGTAAAGGAGGTTAACACACCAAATCTAGTAGTCAAAAACCTTTTTTTAAGACATACCTTCTTCAGCAACTGTTTCTGGATTGTCCAATATCTGAGTTATGTATTCAAGTTCTTGGAGTACATCCTTCATGAAAGGCCTTTCCACTTTCTTCTCCCTCAAACAGGCGAGTGCGAGCTCCATGAAATGCTTCACACTTATCAGAATATTGCTGGACTGATCATCACTGATAAGCTGTTTATCAATGGCATCAATGAATGCGCCATTTTGCACTTGTTGGATCACATAGATTGCCAGATTGACACAATTTTCATCTCTTGCGAAATCTATGGCCTTCTGAGAGGTTAAAAGCTCGAGCAAGACAACTCCAAAACTATACACATCACTTTTATCCGTTAATTGGTAATTTCGATAGTATTCTGGGTCTAGGTAACCTAACGTACCCTGTGCACAAGTTGAAACATGGCTTATTCCTGGCAAAGCCAATCTAGAAAGTCCAAAATCTGAGACTTTAGCATTGAAGTTATCATCTAAAAGAATATTTGTTGACTTGACATCTCTATGATAGATGGGTGGATATGCAGCTGAATGCAGATAAGCTAATGCTTCAGCAGTTTGTGAAGCAATTTTCAGCCTTTTTCTCCAGTCCAAGAAAGTAGGAATCTTACCATGTAAATGGTCATGGAGGGTGCCATTGGAAATGTATTCATATATCATCAATGGTTGCTCAGTTTCTACACAGCAACCTATAAGTTTCACAAGATTCCTGTGATTTACTTGAGATAGTATTCCGACTTCGTTGAGTATCTGTTCGGTGCTCTTTAGATTACCCACTTTAGCCGACTTCACGGCTACGACAGTCCCGTCTTGAAGTTCACCTTTGTAAACCTCTCCAAAGCCACCGCTGCCTAGGACTCTGTCTTTTGAAAATTCATTTGTTGCTTTCTTCATTTCTTTCAGATGAAACATCCTAGCTGGTCTAACGCCATGGCTTAGATTCAACATATCTTCTCTTTCTTTACATAGCTTTTCCTGTTTACTGAAAGTTCTGGACTTCCTGACTGTAATTAGAGCTATAACCGCAGCTAGAATGAAAAAGGAAGCCAGACATACCGAGAGCTTTATGCTGAGTCTAACCATGCTCTTCCTATTCGTTCTCAGGCATGTTCCAAGAATATGATCCCAATAGTAGCTACTTCTGCAAAGGCAACGAGAACGGCTATTGGAACCACCGGTAGGAAGACAATCCGACGCTCCAGTGCAATCAGATTGAGCTCTACAGATTGGTTCAGGTGGAGGAGCCCATTGCATTTCCAAACCTTCCTCCCACTGATTTGCAGGCTTTTCTACATCCAGATGGAGGATACTCCTGAGTGCTCTACAGCCTGA

mRNA sequence

ATGTCGGGCTTGACTGTGAAAGAAATGGAAGAGCTTCGTGATGACATCAAAATGCATCTTGATCTGGACAGGGCCACACCTACACATATCGAGTATTGGGAGGCACTTCTTGTGGTTTGTGATTGGGAACTAGCTGAAGCTCGGAAGAAGGATGCTCTGGATAGAGCCAGAGTTCGTGGTGAGGAGCCTCCTGCTGAGTTGCTTGCAGAAGAAAGGGGTCTGCATTCTAGCATTGAAACAGATGTCAAAAATCTGCTGGAAGGAAAGACTTATGGTGAATTGGAGGCATTACAATCTCAAATTGAGTCACAGATGCGATCTGGAACAGCAAAGGTGGTTGAGTACTGGGAGGCTGTCCTAAAGCGCCTTCATATATACAAGGCCAAGGCTTGCTTGAAGGAAATTCATACGAAAAAACTACATGAGCATCTTGTACGTCTTGAGCAACCTTTCGAGGATGATGAAGAACAGATGGAGCAAGAAGTCAAGATGGAAACTGACCATTCTTTACAAGTGAAAGCTGATGATGATGAGCATGATATTGAAGAACCCCAAACATATTCGCCTGATCTCCTTGAGGAAGAAGATAATCAAGAGGCAGGATCATTTTCACCAGAACTTATGCATGGTGATGAAGATGAAGAGGCAGTTGATCCTGAGGAGGATAGGGCCATACTGGAACGTAAGCGTATTGCTGTCTTAGAAGAACAGCAGAGACGGATTCAAGAAGCAATGGCTACAAAACCTGCTCCAGTAGAGGATAATTTTGAACTGAAAGCCTCAAAAGCCATGGGAATCATGGAGGAAGGCGATGCAGTTTTTGGATCTGGTGCTGAAGTGAACCTAGATTCACAGGTTTATTGGTGGCATGATAAATATCGTCCGAGAAAACCAAAATACTTCAATCGGGTTCATACGGGATATGAGTGGAACAAGTACAACCAGACTCACTACGATCATGACAATCCACCTCCAAAGATTGTGCAAGGATATAAATTTAACATCTTCTACCCAGACCTTGTTGACAAGACAAAAGCTCCAACTTACACCATTGAAAAGGATGGAAACAGCAGTGAGACATGTATCATACGGTTCCATGCGGGGCCACCGTATGAGGATATCGCATTCCGAATTGTAAACAAAGAATGGGAGTATTCTCATAAGAAGGGGTTCAAGTGCACATTTGAGCGTGGAATTTTGCACGTATACTTCAACTTTAAACGATATCGTTATCGCAGCAACTGTTTCTGGATTGTCCAATATCTGAGTTATGTATTCAAGTTCTTGGAGTACATCCTTCATGAAAGGCCTTTCCACTTTCTTCTCCCTCAAACAGGCGAGTGCGAGCTCCATGAAATGCTTCACACTTATCAGAATATTGCTGGACTGATCATCACTGATAAGCTGTTTATCAATGGCATCAATGAATGCGCCATTTTGCACTTGTTGGATCACATAGATTGCCAGATTGACACAATTTTCATCTCTTGCGAAATCTATGGCCTTCTGAGAGGAAGCCAGACATACCGAGAGCTTTATGCTGAGTCTAACCATGCTCTTCCTATTCGTTCTCAGGCATGTTCCAAGAATATGATCCCAATAGTAGCTACTTCTGCAAAGGCAACGAGAACGGCTATTGGAACCACCGGTAGGAAGACAATCCGACGCTCCAGTGCAATCAGATTGAGCTCTACAGATTGGTTCAGGTGGAGGAGCCCATTGCATTTCCAAACCTTCCTCCCACTGATTTGCAGGCTTTTCTACATCCAGATGGAGGATACTCCTGAGTGCTCTACAGCCTGA

Coding sequence (CDS)

ATGTCGGGCTTGACTGTGAAAGAAATGGAAGAGCTTCGTGATGACATCAAAATGCATCTTGATCTGGACAGGGCCACACCTACACATATCGAGTATTGGGAGGCACTTCTTGTGGTTTGTGATTGGGAACTAGCTGAAGCTCGGAAGAAGGATGCTCTGGATAGAGCCAGAGTTCGTGGTGAGGAGCCTCCTGCTGAGTTGCTTGCAGAAGAAAGGGGTCTGCATTCTAGCATTGAAACAGATGTCAAAAATCTGCTGGAAGGAAAGACTTATGGTGAATTGGAGGCATTACAATCTCAAATTGAGTCACAGATGCGATCTGGAACAGCAAAGGTGGTTGAGTACTGGGAGGCTGTCCTAAAGCGCCTTCATATATACAAGGCCAAGGCTTGCTTGAAGGAAATTCATACGAAAAAACTACATGAGCATCTTGTACGTCTTGAGCAACCTTTCGAGGATGATGAAGAACAGATGGAGCAAGAAGTCAAGATGGAAACTGACCATTCTTTACAAGTGAAAGCTGATGATGATGAGCATGATATTGAAGAACCCCAAACATATTCGCCTGATCTCCTTGAGGAAGAAGATAATCAAGAGGCAGGATCATTTTCACCAGAACTTATGCATGGTGATGAAGATGAAGAGGCAGTTGATCCTGAGGAGGATAGGGCCATACTGGAACGTAAGCGTATTGCTGTCTTAGAAGAACAGCAGAGACGGATTCAAGAAGCAATGGCTACAAAACCTGCTCCAGTAGAGGATAATTTTGAACTGAAAGCCTCAAAAGCCATGGGAATCATGGAGGAAGGCGATGCAGTTTTTGGATCTGGTGCTGAAGTGAACCTAGATTCACAGGTTTATTGGTGGCATGATAAATATCGTCCGAGAAAACCAAAATACTTCAATCGGGTTCATACGGGATATGAGTGGAACAAGTACAACCAGACTCACTACGATCATGACAATCCACCTCCAAAGATTGTGCAAGGATATAAATTTAACATCTTCTACCCAGACCTTGTTGACAAGACAAAAGCTCCAACTTACACCATTGAAAAGGATGGAAACAGCAGTGAGACATGTATCATACGGTTCCATGCGGGGCCACCGTATGAGGATATCGCATTCCGAATTGTAAACAAAGAATGGGAGTATTCTCATAAGAAGGGGTTCAAGTGCACATTTGAGCGTGGAATTTTGCACGTATACTTCAACTTTAAACGATATCGTTATCGCAGCAACTGTTTCTGGATTGTCCAATATCTGAGTTATGTATTCAAGTTCTTGGAGTACATCCTTCATGAAAGGCCTTTCCACTTTCTTCTCCCTCAAACAGGCGAGTGCGAGCTCCATGAAATGCTTCACACTTATCAGAATATTGCTGGACTGATCATCACTGATAAGCTGTTTATCAATGGCATCAATGAATGCGCCATTTTGCACTTGTTGGATCACATAGATTGCCAGATTGACACAATTTTCATCTCTTGCGAAATCTATGGCCTTCTGAGAGGAAGCCAGACATACCGAGAGCTTTATGCTGAGTCTAACCATGCTCTTCCTATTCGTTCTCAGGCATGTTCCAAGAATATGATCCCAATAGTAGCTACTTCTGCAAAGGCAACGAGAACGGCTATTGGAACCACCGGTAGGAAGACAATCCGACGCTCCAGTGCAATCAGATTGAGCTCTACAGATTGGTTCAGGTGGAGGAGCCCATTGCATTTCCAAACCTTCCTCCCACTGATTTGCAGGCTTTTCTACATCCAGATGGAGGATACTCCTGAGTGCTCTACAGCCTGA

Protein sequence

MSGLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEEPPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKRLHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIEEPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQEAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRSNCFWIVQYLSYVFKFLEYILHERPFHFLLPQTGECELHEMLHTYQNIAGLIITDKLFINGINECAILHLLDHIDCQIDTIFISCEIYGLLRGSQTYRELYAESNHALPIRSQACSKNMIPIVATSAKATRTAIGTTGRKTIRRSSAIRLSSTDWFRWRSPLHFQTFLPLICRLFYIQMEDTPECSTA

Homology

[Close]

BLAST of Lsi03G019570 vs. ExPASy Swiss-Prot
Match: F4I2J8 (Cactin OS=Arabidopsis thaliana OX=3702 GN=CTN PE=1 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 3.9e-177
Identity = 309/421 (73.40%), Postives = 358/421 (85.04%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVK+MEELRDDIKM+LDLDRATPT ++YWEAL+VVCDWELAEARK+DALDRARVRGEE
Sbjct: 302 GLTVKDMEELRDDIKMYLDLDRATPTRVQYWEALIVVCDWELAEARKRDALDRARVRGEE 361

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PPAELLA+ERGLH+ +E DV+ LL+GKT+ EL  LQ  IESQ+RSG+AKVVEYWEAVLKR
Sbjct: 362 PPAELLAQERGLHAGVEADVRKLLDGKTHAELVELQLDIESQLRSGSAKVVEYWEAVLKR 421

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           L IYKAKACLKEIH + L  HL RLEQ  E +++       +E +  L    +++E +I 
Sbjct: 422 LEIYKAKACLKEIHAEMLRRHLHRLEQLSEGEDD-------VEVNPGLTRVVEENEEEIN 481

Query: 183 E------PQTYSPDLLEEEDN-----QEAGSFSPELMHGDEDEEAVDPEEDRAILERKRI 242
           +       + +SP+ + EE+      + AGSFSPELMHGD+ EEA+DPEED+ +L+ KR+
Sbjct: 482 DTNLSDAEEAFSPEPVAEEEEADEAAEAAGSFSPELMHGDDREEAIDPEEDKKLLQMKRM 541

Query: 243 AVLEEQQRRIQEAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHD 302
            VLE+Q++R++EAM +KPAPVEDN ELKA KAMG MEEGDA+FGS AEVNLDS+VYWWHD
Sbjct: 542 IVLEKQKKRLKEAMDSKPAPVEDNLELKAMKAMGAMEEGDAIFGSNAEVNLDSEVYWWHD 601

Query: 303 KYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTI 362
           KYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDK KAP YTI
Sbjct: 602 KYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPIYTI 661

Query: 363 EKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRY 413
           EKDG S+ETC+IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILH+YFNFKR+RY
Sbjct: 662 EKDGTSAETCMIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHLYFNFKRHRY 715

[Close]

BLAST of Lsi03G019570 vs. ExPASy Swiss-Prot
Match: F1Q8W0 (Cactin OS=Danio rerio OX=7955 GN=cactin PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.6e-75
Identity = 178/468 (38.03%), Postives = 266/468 (56.84%), Query Frame = 0


Query: 1   MSGLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRG 60
           ++GLTV +ME+L +DIK++++L+     ++++W  +  + + E+++ RK +A  +     
Sbjct: 393 LNGLTVTDMEDLLEDIKVYMELE--CGKNVDFWRDMTTITEDEISKLRKLEASGKG---- 452

Query: 61  EEPPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKV-VEYWEAV 120
              P +      G+++S+ TDV+++ +GKTY +L+AL   IES++++G + + + YWE++
Sbjct: 453 ---PGD---RREGINTSVSTDVQSVFKGKTYSQLQALYMNIESKIQAGGSNLDIGYWESL 512

Query: 121 LKRLHIYKAKACLKEIHTKKLHEHLVRLEQ----------PFEDDEEQMEQEVKMET--- 180
           L+++ +Y A+A L+E H   L + L +L+Q          P   +E + EQ +  E    
Sbjct: 513 LQQVRVYMARARLRERHQDVLRQKLYKLKQEQGVESEPLFPIIKEEPEKEQPISREAGSG 572

Query: 181 -----DHSLQVKADDDE---------HDIEEPQTYSPD------------------LLEE 240
                  S Q   ++DE          + E     SP+                  +L E
Sbjct: 573 EEEAGSSSQQADREEDEDRRSRRTGGEEAERSGRSSPEEEKKGEEEEGEKDEAPEAVLTE 632

Query: 241 ED-------NQEAGSFSPELMHGDE---DEEAVDPEEDRAILERKRIAVLEEQQRRIQEA 300
           ED         ++G +SP L+   E   D   +  EED   L+R  +A      RR  + 
Sbjct: 633 EDLIQQSQAEYDSGRYSPTLLQNSELPLDTHIIAEEED---LQRLLLA------RRQMQV 692

Query: 301 MATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRV 360
                   ED F  +A + MG    GD    S  E+ L  ++Y W DKYRPRKP++FNRV
Sbjct: 693 TGDASESAEDLFVRRAKEGMG----GDEAQFS-VEMPLTGKMYLWADKYRPRKPRFFNRV 752

Query: 361 HTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCIIR 413
           HTG+EWNKYNQTHYD DNPPPKIVQGYKFNIFYPDL+DK   P Y +E   ++ +  I+R
Sbjct: 753 HTGFEWNKYNQTHYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPQYFLEPCPDNKDFGILR 812

[Close]

BLAST of Lsi03G019570 vs. ExPASy Swiss-Prot
Match: Q8WUQ7 (Cactin OS=Homo sapiens OX=9606 GN=CACTIN PE=1 SV=3)

HSP 1 Score: 276.6 bits (706), Expect = 6.8e-73
Identity = 172/451 (38.14%), Postives = 265/451 (58.76%), Query Frame = 0


Query: 1   MSGLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRG 60
           ++GLTV +ME+L +DI+++++L++    + ++W  +  + + E+++ RK +A  +     
Sbjct: 333 LNGLTVADMEDLLEDIQVYMELEQG--KNADFWRDMTTITEDEISKLRKLEASGKG---- 392

Query: 61  EEPPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKV-VEYWEAV 120
              P E      G+++S+ +DV+++ +GKTY +L+ +   IE ++R+G   + + YWE++
Sbjct: 393 ---PGE---RREGVNASVSSDVQSVFKGKTYNQLQVIFQGIEGKIRAGGPNLDMGYWESL 452

Query: 121 LKRLHIYKAKACLKEIHTKKLHEHLVRLEQ----------PFEDDEEQ-----MEQE--- 180
           L++L  + A+A L+E H   L + L +L+Q          P    E Q     +E E   
Sbjct: 453 LQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEPLFPILKQEPQSPSRSLEPEDAA 512

Query: 181 ------------VKMETDHSLQVKAD---DDEHDIE-EPQTYSPDLLEEE-DNQEAGSFS 240
                        + E D +   + D   D E + E E      DL+++  D+ +AG +S
Sbjct: 513 PTPPGPSSEGGPAEAEVDGATPTEGDGDGDGEGEGEGEAVLMEEDLIQQSLDDYDAGRYS 572

Query: 241 PELMHGDE---DEEAVDPEEDRAILERKRIAVLEEQQRRIQEAMATKPAPVEDNFELKAS 300
           P L+   E   D   ++P+ED   L+R +++      R+  +         ED F  +A 
Sbjct: 573 PRLLTAHELPLDAHVLEPDED---LQRLQLS------RQQLQVTGDASESAEDIFFRRAK 632

Query: 301 KAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHD 360
           + MG   + +A F    E+ L  + Y W DKYRPRKP++FNRVHTG+EWNKYNQTHYD D
Sbjct: 633 EGMG---QDEAQF--SVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFD 692

Query: 361 NPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNK 413
           NPPPKIVQGYKFNIFYPDL+DK   P Y +E   ++ +  I+RFHAGPPYEDIAF+IVN+
Sbjct: 693 NPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFAILRFHAGPPYEDIAFKIVNR 752

[Close]

BLAST of Lsi03G019570 vs. ExPASy Swiss-Prot
Match: Q9CS00 (Cactin OS=Mus musculus OX=10090 GN=Cactin PE=1 SV=2)

HSP 1 Score: 275.0 bits (702), Expect = 2.0e-72
Identity = 169/443 (38.15%), Postives = 264/443 (59.59%), Query Frame = 0


Query: 1   MSGLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRG 60
           ++GLTV +ME+L +DI+++++L++    ++++W  +  + + E+A+ RK +A  +     
Sbjct: 355 LNGLTVADMEDLLEDIQVYMELEQG--KNVDFWRDMTTITEDEIAKLRKLEASGKG---- 414

Query: 61  EEPPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKV-VEYWEAV 120
              P E      G+++S+ +DV+++ +GKTY +L+ +   IE ++R+G   + + YWE++
Sbjct: 415 ---PGE---RREGVNASVSSDVQSVFKGKTYNQLQVIFQGIEGKIRAGGPNLDMGYWESL 474

Query: 121 LKRLHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETD--HSLQVK---- 180
           L++L  + A+A L+E H   L + L +L+Q    + E +   +K E    HS + +    
Sbjct: 475 LQQLRAHMARARLRERHQDVLRQKLFKLKQEQGVESEPLFPILKSEPSAAHSPEPEERPP 534

Query: 181 ----ADDDEHDIEEPQTYSPD----------LLEEED-------NQEAGSFSPELMHGDE 240
               + D    +E  +  +P           +L EED       + +AG +SP L+   E
Sbjct: 535 SPGTSVDPVEPVEPEEATAPGEAEGEAEGEAVLMEEDLIQQSLADYDAGRYSPRLLTAHE 594

Query: 241 ---DEEAVDPEEDRAILERKRIAVLEEQQRRIQEAMATKPAPVEDNFELKASKAMGIMEE 300
              D   ++P ED   L+R +++      R+  +A        ED F  +A + MG   +
Sbjct: 595 LPLDAHVLEPHED---LQRLQLS------RQQLQATGDASESAEDIFFRRAREGMG---Q 654

Query: 301 GDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQ 360
            +A F    E+ L  + Y W DKYRPRKP++FNRVHTG+EWNKYNQTHYD DNPPPKIVQ
Sbjct: 655 DEAQF--SVEMPLGGRAYLWADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFDNPPPKIVQ 714

Query: 361 GYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKK 413
           GYKFNIFYPDL+ K   P Y +E   ++ +  I+RFHAGPPYEDIAF+IV++EWEYSH+ 
Sbjct: 715 GYKFNIFYPDLIRKRATPEYFLEACADNRDFAILRFHAGPPYEDIAFKIVSREWEYSHRH 771

[Close]

BLAST of Lsi03G019570 vs. ExPASy Swiss-Prot
Match: Q9VR99 (Cactin OS=Drosophila melanogaster OX=7227 GN=cactin PE=1 SV=3)

HSP 1 Score: 261.2 bits (666), Expect = 3.0e-68
Identity = 165/437 (37.76%), Postives = 262/437 (59.95%), Query Frame = 0


Query: 1   MSGLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRG 60
           ++GL V+E+E+L  DIK++ +L++    HI++W  ++ +   EL   +K +A +      
Sbjct: 310 LNGLPVEELEDLLVDIKVYEELEQG--KHIDFWNDMITIVQDELQRQQKLEAEN------ 369

Query: 61  EEPPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVE--YWEA 120
               + L     G+H ++  DV ++  GK   +LE ++ +IE+++ SG A  V+  YWE+
Sbjct: 370 ----SSLNQRRDGIHQAVVKDVADIFRGKNAQQLEEMRHRIEAKI-SGRADGVDISYWES 429

Query: 121 VLKRLHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDE 180
           +L +L  + A+A L++ H   L E L  L++  E+D E ++++V      + QVK ++ E
Sbjct: 430 LLSQLKAHMARARLRDRHQALLREKLSLLKR--ENDNETLQEKV------APQVKEEEME 489

Query: 181 -HDIEEPQTYSPDLLEEEDN----------QEAGSFSPELMHGD-------EDEEAVDPE 240
             D E+P+       +EED            +AG++SP  +  +       ++E+  +PE
Sbjct: 490 TQDAEDPEVEEGSPEDEEDPLNELRKTVRLYQAGNYSPRYIREEDFTGRRAQNEDVDEPE 549

Query: 241 EDRAILERKRIAVLEEQQRRIQEAMATKPAPVEDN----FELK-ASKAMGIMEEGDAVFG 300
            +  + E +     +E++ + Q  +   P  V++N     EL+  ++A   M+  +A F 
Sbjct: 550 AEGLLYEEED----DERRTQRQRLLILHPERVDNNQLTPQELRMRNEAKQGMQGDEAEF- 609

Query: 301 SGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNI 360
              E  LD+      DKYRPRKP+YFNRVHTG+EWNKYNQTHYD DNPPPKIVQGYKFNI
Sbjct: 610 -SVETTLDAVPQLATDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNI 669

Query: 361 FYPDLVDKTKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTF 413
           FYPDL+DK++ P Y +    ++ +  ++RFH GPPYEDIAF+IVN+EWE+S+K+GF+C F
Sbjct: 670 FYPDLMDKSQTPQYFLTPCADNGDFAVLRFHTGPPYEDIAFKIVNREWEFSYKRGFRCQF 719

[Close]

BLAST of Lsi03G019570 vs. ExPASy TrEMBL
Match: A0A0A0LAP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G748150 PE=4 SV=1)

HSP 1 Score: 805.1 bits (2078), Expect = 2.0e-229
Identity = 398/410 (97.07%), Postives = 406/410 (99.02%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVKEMEELRDDIKMHLD+DRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE
Sbjct: 271 GLTVKEMEELRDDIKMHLDMDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 330

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PP ELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMR+GTAKVVEYWEAVLKR
Sbjct: 331 PPPELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRTGTAKVVEYWEAVLKR 390

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           LHIYKAKACLKEIHTKKLHEHLVRLE+P ED+EEQM+ EVKMETD+SLQVKADDDEHDIE
Sbjct: 391 LHIYKAKACLKEIHTKKLHEHLVRLEEPLEDNEEQMDPEVKMETDYSLQVKADDDEHDIE 450

Query: 183 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 242
           EPQTYSPDLL EEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRR+Q
Sbjct: 451 EPQTYSPDLLVEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRVQ 510

Query: 243 EAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 302
           EAMATKPAPVEDNFELKASKAMG+MEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
Sbjct: 511 EAMATKPAPVEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 570

Query: 303 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 362
           RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI
Sbjct: 571 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 630

Query: 363 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 413
           IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR
Sbjct: 631 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 680

[Close]

BLAST of Lsi03G019570 vs. ExPASy TrEMBL
Match: A0A5A7TKV0 (Cactin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003270 PE=4 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 1.5e-227
Identity = 395/410 (96.34%), Postives = 403/410 (98.29%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVKEMEELRDDIKMHLD+DRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE
Sbjct: 272 GLTVKEMEELRDDIKMHLDMDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 331

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PP ELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR
Sbjct: 332 PPPELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 391

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           LHIYKAKACLKEIHTKKLHEHLVRLE+P EDDEE +EQEVKM TD+S+QVKADDDEHDIE
Sbjct: 392 LHIYKAKACLKEIHTKKLHEHLVRLEEPLEDDEEHLEQEVKMGTDYSIQVKADDDEHDIE 451

Query: 183 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 242
           EPQTYSPDLL EE N+EAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRR+Q
Sbjct: 452 EPQTYSPDLLVEEYNEEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRVQ 511

Query: 243 EAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 302
           EAMATKP PVEDNFELKASKAMG+MEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
Sbjct: 512 EAMATKPVPVEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 571

Query: 303 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 362
           RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI
Sbjct: 572 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 631

Query: 363 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 413
           IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR
Sbjct: 632 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 681

[Close]

BLAST of Lsi03G019570 vs. ExPASy TrEMBL
Match: A0A1S3B792 (cactin OS=Cucumis melo OX=3656 GN=LOC103486550 PE=4 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 1.5e-227
Identity = 395/410 (96.34%), Postives = 403/410 (98.29%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVKEMEELRDDIKMHLD+DRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE
Sbjct: 273 GLTVKEMEELRDDIKMHLDMDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 332

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PP ELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR
Sbjct: 333 PPPELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 392

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           LHIYKAKACLKEIHTKKLHEHLVRLE+P EDDEE +EQEVKM TD+S+QVKADDDEHDIE
Sbjct: 393 LHIYKAKACLKEIHTKKLHEHLVRLEEPLEDDEEHLEQEVKMGTDYSIQVKADDDEHDIE 452

Query: 183 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 242
           EPQTYSPDLL EE N+EAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRR+Q
Sbjct: 453 EPQTYSPDLLVEEYNEEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRVQ 512

Query: 243 EAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 302
           EAMATKP PVEDNFELKASKAMG+MEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
Sbjct: 513 EAMATKPVPVEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 572

Query: 303 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 362
           RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI
Sbjct: 573 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 632

Query: 363 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 413
           IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR
Sbjct: 633 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 682

[Close]

BLAST of Lsi03G019570 vs. ExPASy TrEMBL
Match: A0A345BTA5 (Actin OS=Cucurbita pepo subsp. pepo OX=3664 PE=2 SV=1)

HSP 1 Score: 786.2 bits (2029), Expect = 9.8e-224
Identity = 387/410 (94.39%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE
Sbjct: 272 GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 331

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAV+KR
Sbjct: 332 PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVIKR 391

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEE+++QE++MET+ SLQVKA+++E DI 
Sbjct: 392 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEKVDQEIEMETERSLQVKAEEEELDIR 451

Query: 183 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 242
             +TYSPDLLEEE+N+EAGSFSPEL+HGDEDE+A+DPEEDRAILERKRIAVLEEQQRRIQ
Sbjct: 452 AAETYSPDLLEEEENEEAGSFSPELIHGDEDEQAIDPEEDRAILERKRIAVLEEQQRRIQ 511

Query: 243 EAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 302
           EAMATKPAP EDNFELKASKAMG+MEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
Sbjct: 512 EAMATKPAPPEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 571

Query: 303 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 362
           RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI
Sbjct: 572 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 631

Query: 363 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 413
           IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR
Sbjct: 632 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 681

[Close]

BLAST of Lsi03G019570 vs. ExPASy TrEMBL
Match: A0A6J1G4S4 (cactin isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450769 PE=4 SV=1)

HSP 1 Score: 786.2 bits (2029), Expect = 9.8e-224
Identity = 387/410 (94.39%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE
Sbjct: 272 GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 331

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAV+KR
Sbjct: 332 PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVIKR 391

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEE+++QE++MET+ SLQVKA+++E DI 
Sbjct: 392 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEKVDQEIEMETERSLQVKAEEEELDIR 451

Query: 183 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 242
             +TYSPDLLEEE+N+EAGSFSPEL+HGDEDE+A+DPEEDRAILERKRIAVLEEQQRRIQ
Sbjct: 452 AAETYSPDLLEEEENEEAGSFSPELIHGDEDEQAIDPEEDRAILERKRIAVLEEQQRRIQ 511

Query: 243 EAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 302
           EAMATKPAP EDNFELKASKAMG+MEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
Sbjct: 512 EAMATKPAPPEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 571

Query: 303 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 362
           RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI
Sbjct: 572 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 631

Query: 363 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 413
           IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR
Sbjct: 632 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 681

[Close]

BLAST of Lsi03G019570 vs. NCBI nr
Match: XP_038905004.1 (cactin [Benincasa hispida])

HSP 1 Score: 816.6 bits (2108), Expect = 1.4e-232
Identity = 406/410 (99.02%), Postives = 408/410 (99.51%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE
Sbjct: 272 GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 331

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR
Sbjct: 332 PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 391

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVK+ETDHSLQVKADD EHDIE
Sbjct: 392 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKVETDHSLQVKADDYEHDIE 451

Query: 183 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 242
           EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ
Sbjct: 452 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 511

Query: 243 EAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 302
           EAMATKP PVEDNFELKASKAMG+MEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
Sbjct: 512 EAMATKPGPVEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 571

Query: 303 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 362
           RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI
Sbjct: 572 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 631

Query: 363 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 413
           IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR
Sbjct: 632 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 681

[Close]

BLAST of Lsi03G019570 vs. NCBI nr
Match: XP_004137859.1 (cactin [Cucumis sativus] >KGN59035.1 hypothetical protein Csa_001577 [Cucumis sativus])

HSP 1 Score: 805.1 bits (2078), Expect = 4.2e-229
Identity = 398/410 (97.07%), Postives = 406/410 (99.02%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVKEMEELRDDIKMHLD+DRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE
Sbjct: 271 GLTVKEMEELRDDIKMHLDMDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 330

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PP ELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMR+GTAKVVEYWEAVLKR
Sbjct: 331 PPPELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRTGTAKVVEYWEAVLKR 390

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           LHIYKAKACLKEIHTKKLHEHLVRLE+P ED+EEQM+ EVKMETD+SLQVKADDDEHDIE
Sbjct: 391 LHIYKAKACLKEIHTKKLHEHLVRLEEPLEDNEEQMDPEVKMETDYSLQVKADDDEHDIE 450

Query: 183 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 242
           EPQTYSPDLL EEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRR+Q
Sbjct: 451 EPQTYSPDLLVEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRVQ 510

Query: 243 EAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 302
           EAMATKPAPVEDNFELKASKAMG+MEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
Sbjct: 511 EAMATKPAPVEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 570

Query: 303 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 362
           RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI
Sbjct: 571 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 630

Query: 363 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 413
           IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR
Sbjct: 631 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 680

[Close]

BLAST of Lsi03G019570 vs. NCBI nr
Match: XP_008442772.1 (PREDICTED: cactin [Cucumis melo])

HSP 1 Score: 798.9 bits (2062), Expect = 3.0e-227
Identity = 395/410 (96.34%), Postives = 403/410 (98.29%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVKEMEELRDDIKMHLD+DRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE
Sbjct: 273 GLTVKEMEELRDDIKMHLDMDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 332

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PP ELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR
Sbjct: 333 PPPELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 392

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           LHIYKAKACLKEIHTKKLHEHLVRLE+P EDDEE +EQEVKM TD+S+QVKADDDEHDIE
Sbjct: 393 LHIYKAKACLKEIHTKKLHEHLVRLEEPLEDDEEHLEQEVKMGTDYSIQVKADDDEHDIE 452

Query: 183 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 242
           EPQTYSPDLL EE N+EAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRR+Q
Sbjct: 453 EPQTYSPDLLVEEYNEEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRVQ 512

Query: 243 EAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 302
           EAMATKP PVEDNFELKASKAMG+MEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
Sbjct: 513 EAMATKPVPVEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 572

Query: 303 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 362
           RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI
Sbjct: 573 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 632

Query: 363 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 413
           IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR
Sbjct: 633 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 682

[Close]

BLAST of Lsi03G019570 vs. NCBI nr
Match: KAA0043942.1 (cactin [Cucumis melo var. makuwa] >TYK25198.1 cactin [Cucumis melo var. makuwa])

HSP 1 Score: 798.9 bits (2062), Expect = 3.0e-227
Identity = 395/410 (96.34%), Postives = 403/410 (98.29%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVKEMEELRDDIKMHLD+DRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE
Sbjct: 272 GLTVKEMEELRDDIKMHLDMDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 331

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PP ELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR
Sbjct: 332 PPPELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 391

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           LHIYKAKACLKEIHTKKLHEHLVRLE+P EDDEE +EQEVKM TD+S+QVKADDDEHDIE
Sbjct: 392 LHIYKAKACLKEIHTKKLHEHLVRLEEPLEDDEEHLEQEVKMGTDYSIQVKADDDEHDIE 451

Query: 183 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 242
           EPQTYSPDLL EE N+EAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRR+Q
Sbjct: 452 EPQTYSPDLLVEEYNEEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRVQ 511

Query: 243 EAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 302
           EAMATKP PVEDNFELKASKAMG+MEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
Sbjct: 512 EAMATKPVPVEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 571

Query: 303 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 362
           RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI
Sbjct: 572 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 631

Query: 363 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 413
           IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR
Sbjct: 632 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 681

[Close]

BLAST of Lsi03G019570 vs. NCBI nr
Match: AXF54162.1 (actin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 786.2 bits (2029), Expect = 2.0e-223
Identity = 387/410 (94.39%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE
Sbjct: 272 GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 331

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAV+KR
Sbjct: 332 PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVIKR 391

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEE+++QE++MET+ SLQVKA+++E DI 
Sbjct: 392 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEKVDQEIEMETERSLQVKAEEEELDIR 451

Query: 183 EPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQ 242
             +TYSPDLLEEE+N+EAGSFSPEL+HGDEDE+A+DPEEDRAILERKRIAVLEEQQRRIQ
Sbjct: 452 AAETYSPDLLEEEENEEAGSFSPELIHGDEDEQAIDPEEDRAILERKRIAVLEEQQRRIQ 511

Query: 243 EAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 302
           EAMATKPAP EDNFELKASKAMG+MEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
Sbjct: 512 EAMATKPAPPEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN 571

Query: 303 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 362
           RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI
Sbjct: 572 RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCI 631

Query: 363 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 413
           IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR
Sbjct: 632 IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYR 681

[Close]

BLAST of Lsi03G019570 vs. TAIR 10
Match: AT1G03910.1 (EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2); Has 11711 Blast hits to 7382 proteins in 452 species: Archae - 31; Bacteria - 352; Metazoa - 6006; Fungi - 1138; Plants - 599; Viruses - 33; Other Eukaryotes - 3552 (source: NCBI BLink). )

HSP 1 Score: 622.9 bits (1605), Expect = 2.8e-178
Identity = 309/421 (73.40%), Postives = 358/421 (85.04%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVK+MEELRDDIKM+LDLDRATPT ++YWEAL+VVCDWELAEARK+DALDRARVRGEE
Sbjct: 258 GLTVKDMEELRDDIKMYLDLDRATPTRVQYWEALIVVCDWELAEARKRDALDRARVRGEE 317

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PPAELLA+ERGLH+ +E DV+ LL+GKT+ EL  LQ  IESQ+RSG+AKVVEYWEAVLKR
Sbjct: 318 PPAELLAQERGLHAGVEADVRKLLDGKTHAELVELQLDIESQLRSGSAKVVEYWEAVLKR 377

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           L IYKAKACLKEIH + L  HL RLEQ  E +++       +E +  L    +++E +I 
Sbjct: 378 LEIYKAKACLKEIHAEMLRRHLHRLEQLSEGEDD-------VEVNPGLTRVVEENEEEIN 437

Query: 183 E------PQTYSPDLLEEEDN-----QEAGSFSPELMHGDEDEEAVDPEEDRAILERKRI 242
           +       + +SP+ + EE+      + AGSFSPELMHGD+ EEA+DPEED+ +L+ KR+
Sbjct: 438 DTNLSDAEEAFSPEPVAEEEEADEAAEAAGSFSPELMHGDDREEAIDPEEDKKLLQMKRM 497

Query: 243 AVLEEQQRRIQEAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHD 302
            VLE+Q++R++EAM +KPAPVEDN ELKA KAMG MEEGDA+FGS AEVNLDS+VYWWHD
Sbjct: 498 IVLEKQKKRLKEAMDSKPAPVEDNLELKAMKAMGAMEEGDAIFGSNAEVNLDSEVYWWHD 557

Query: 303 KYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTI 362
           KYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDK KAP YTI
Sbjct: 558 KYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPIYTI 617

Query: 363 EKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRY 413
           EKDG S+ETC+IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILH+YFNFKR+RY
Sbjct: 618 EKDGTSAETCMIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHLYFNFKRHRY 671

[Close]

BLAST of Lsi03G019570 vs. TAIR 10
Match: AT1G03910.2 (EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2). )

HSP 1 Score: 622.9 bits (1605), Expect = 2.8e-178
Identity = 309/421 (73.40%), Postives = 358/421 (85.04%), Query Frame = 0


Query: 3   GLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEE 62
           GLTVK+MEELRDDIKM+LDLDRATPT ++YWEAL+VVCDWELAEARK+DALDRARVRGEE
Sbjct: 302 GLTVKDMEELRDDIKMYLDLDRATPTRVQYWEALIVVCDWELAEARKRDALDRARVRGEE 361

Query: 63  PPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKR 122
           PPAELLA+ERGLH+ +E DV+ LL+GKT+ EL  LQ  IESQ+RSG+AKVVEYWEAVLKR
Sbjct: 362 PPAELLAQERGLHAGVEADVRKLLDGKTHAELVELQLDIESQLRSGSAKVVEYWEAVLKR 421

Query: 123 LHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEQMEQEVKMETDHSLQVKADDDEHDIE 182
           L IYKAKACLKEIH + L  HL RLEQ  E +++       +E +  L    +++E +I 
Sbjct: 422 LEIYKAKACLKEIHAEMLRRHLHRLEQLSEGEDD-------VEVNPGLTRVVEENEEEIN 481

Query: 183 E------PQTYSPDLLEEEDN-----QEAGSFSPELMHGDEDEEAVDPEEDRAILERKRI 242
           +       + +SP+ + EE+      + AGSFSPELMHGD+ EEA+DPEED+ +L+ KR+
Sbjct: 482 DTNLSDAEEAFSPEPVAEEEEADEAAEAAGSFSPELMHGDDREEAIDPEEDKKLLQMKRM 541

Query: 243 AVLEEQQRRIQEAMATKPAPVEDNFELKASKAMGIMEEGDAVFGSGAEVNLDSQVYWWHD 302
            VLE+Q++R++EAM +KPAPVEDN ELKA KAMG MEEGDA+FGS AEVNLDS+VYWWHD
Sbjct: 542 IVLEKQKKRLKEAMDSKPAPVEDNLELKAMKAMGAMEEGDAIFGSNAEVNLDSEVYWWHD 601

Query: 303 KYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTI 362
           KYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDK KAP YTI
Sbjct: 602 KYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPIYTI 661

Query: 363 EKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRY 413
           EKDG S+ETC+IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILH+YFNFKR+RY
Sbjct: 662 EKDGTSAETCMIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHLYFNFKRHRY 715

[Close]

BLAST of Lsi03G019570 vs. TAIR 10
Match: AT2G36815.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03910.1); Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 4.5e-19
Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 38  VVCDWELAEARKKDALDRARVRGEEPPAELLA-EERGLHSSIETDVKNLLEGKTYGELEA 97
           V+ +WEL +AR++D              ELLA +ER LH+ +E  V+ LL+GKT+ EL  
Sbjct: 17  VIGEWELTKARRRD-------------EELLASQERALHAGVEAGVRELLDGKTHAELVQ 76

Query: 98  LQSQIESQMRSGTAKVVEYWEAVLKRLHIYKAKACLKE 135
           LQ  IESQ+RSG AKVVEY EAVLKRL+ YKAKACLK+
Sbjct: 77  LQFDIESQLRSGAAKVVEYREAVLKRLNRYKAKACLKK 101

[Close]

BLAST of Lsi03G019570 vs. TAIR 10
Match: AT2G36815.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03910.2); Has 53 Blast hits to 53 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 12; Plants - 32; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 1.7e-18
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 41  DWELAEARKKDALDRARVRGEEPPAELLA-EERGLHSSIETDVKNLLEGKTYGELEALQS 100
           +WEL +AR++D              ELLA +ER LH+ +E  V+ LL+GKT+ EL  LQ 
Sbjct: 26  EWELTKARRRD-------------EELLASQERALHAGVEAGVRELLDGKTHAELVQLQF 85

Query: 101 QIESQMRSGTAKVVEYWEAVLKRLHIYKAKACLKE 135
            IESQ+RSG AKVVEY EAVLKRL+ YKAKACLK+
Sbjct: 86  DIESQLRSGAAKVVEYREAVLKRLNRYKAKACLKK 107

The following BLAST results are available for this feature:

BLAST of Lsi03G019570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I2J8	3.9e-177	73.40	Cactin OS=Arabidopsis thaliana OX=3702 GN=CTN PE=1 SV=1	[more]
F1Q8W0	5.6e-75	38.03	Cactin OS=Danio rerio OX=7955 GN=cactin PE=2 SV=1	[more]
Q8WUQ7	6.8e-73	38.14	Cactin OS=Homo sapiens OX=9606 GN=CACTIN PE=1 SV=3	[more]
Q9CS00	2.0e-72	38.15	Cactin OS=Mus musculus OX=10090 GN=Cactin PE=1 SV=2	[more]
Q9VR99	3.0e-68	37.76	Cactin OS=Drosophila melanogaster OX=7227 GN=cactin PE=1 SV=3	[more]

BLAST of Lsi03G019570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAP8	2.0e-229	97.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G748150 PE=4 SV=1	[more]
A0A5A7TKV0	1.5e-227	96.34	Cactin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003270 PE=4 S...	[more]
A0A1S3B792	1.5e-227	96.34	cactin OS=Cucumis melo OX=3656 GN=LOC103486550 PE=4 SV=1	[more]
A0A345BTA5	9.8e-224	94.39	Actin OS=Cucurbita pepo subsp. pepo OX=3664 PE=2 SV=1	[more]
A0A6J1G4S4	9.8e-224	94.39	cactin isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450769 PE=4 SV=1	[more]

BLAST of Lsi03G019570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905004.1	1.4e-232	99.02	cactin [Benincasa hispida]	[more]
XP_004137859.1	4.2e-229	97.07	cactin [Cucumis sativus] >KGN59035.1 hypothetical protein Csa_001577 [Cucumis sa...	[more]
XP_008442772.1	3.0e-227	96.34	PREDICTED: cactin [Cucumis melo]	[more]
KAA0043942.1	3.0e-227	96.34	cactin [Cucumis melo var. makuwa] >TYK25198.1 cactin [Cucumis melo var. makuwa]	[more]
AXF54162.1	2.0e-223	94.39	actin [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi03G019570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03910.1	2.8e-178	73.40	EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS ...	[more]
AT1G03910.2	2.8e-178	73.40	EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS ...	[more]
AT2G36815.2	4.5e-19	55.10	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G36815.1	1.7e-18	55.79	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01050	CactinC_cactus_3	coord: 289..413 e-value: 4.4E-84 score: 295.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..222
None	No IPR available	PANTHER	PTHR21737	POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3	coord: 2..412
None	No IPR available	PANTHER	PTHR21737:SF19	BNAC05G02180D PROTEIN	coord: 2..412
IPR018816	Cactin, central domain	PFAM	PF10312	Cactin_mid	coord: 2..136 e-value: 1.2E-34 score: 119.7
IPR019134	Cactin, C-terminal	PFAM	PF09732	CactinC_cactus	coord: 289..412 e-value: 1.1E-61 score: 206.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G019570.1	Lsi03G019570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0005515	protein binding