Lsi03G006880 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G006880
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr03: 8833200 .. 8838371 (+)
RNA-Seq ExpressionLsi03G006880
SyntenyLsi03G006880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTATAGGGCAATACCTTGAGCGTTTTGGCTGCTACAATTAGATTTTAGAGTCATAGTTTTCTAAGGACATGCATTTCATCATCTTTACTTTTGTAGGATCTCGCATTAAGATGAATCCTGGAGTTTGTCATTTGGCATTCATTTGATTTTAATGAAAATGAAAGTTTGTTTTTCTTTCTGTTCTCTAGCTTTCTCTCTCTCTCTTTGGCAAATTAAATTATTATTTTCTTCTCTTGCACAAGAGACAAAAAGTTTTAAGCTTATAAAATAGCTTGAGGTTCACCTCCTCGCCATCCTTACTGGACGAGAAGAAATGCTAGAATAATGGATGAGCAATCTAACGATCAAGTTCAGCAGCCCGTCAGGATGTGGATGAGCTAAAAGAACAGTTAACAAAGATCCTAGAATTACTCACCGCGGGAAAAGGAAAGAATGTTGCAGGAACTTCAACACAAGTGGAAACTAGTTTAAATCAGACATTAGACGACATGCCTGTATACCCTCATGGTTTTACTCTCTAAAGGATGTCTAGTCCACACTTGGTAGGTGTGACATACCCTACTTCATTTCCTGCACACGAGTCTAATCAAACCTCGCAGTAGACAACTCGCATCGGTGATTCGGTATACACCCTAGTTATGGAGGGTGAAAAAAAGGTTTTAGAGGATTAGGGTAGCAGAAGAAGACTAGAGTTTCTAGAAGAAAGATTACGGGCAATTGAAGGTGCAGATATGTACCAGAACGTTGACGCAACACAGTTATGTTTGATTTTGATCCCTCCCAAATTTAAGACTTCAGATTTTTAAAAGTATAGCTGAACCACGTGCCCAAAAAACCACTTGGTTATGTATTTTCAAAAGATGTCAGCTTATGCTCATGATGACAAGTTATTGATTCGTTGATTTCAAGATAGTTTAGTTGGTCCGACCTCTCGTTGGTACATGCATTTGGATGGTTCACAAGTACACAAATGGAATGATCTCGCCGATTCCTTCCTAAAGCAGTATAAATACAATATTGATATGGCACCAGATCGTTTGGATCTTCAGAGATTGAAGAAGAAAAGTGTTGAAAGTTTTAAGGAGCACGCGCAACATTAAAGAGAAATGGCCGCACAAGTGTAGCCTCCGCTGACAAACAAAGAATTGATAGCTATATTCATAAATACTCTTAGCGCCCCATACTATGATAGGATGATTAGGAGTGCTTCGACTAATTTCTTGGACATAATAACATTGGGGAAATGATCGAATTCAGAGTAAAGAATGGAATGATTACGGATTTTGCTTCAAAATCAAGGAAAATGATGACCCCAAAGAAAAAGGAGGGAGAAGTACACAAGTTGAGCTCGACTCAAAGAGTAGTTGCACATGTGCCCTCACCAATCATTGGGCAAGCAAATTACTATGTTAATAATCAGAATAGAGATCAAAATCCTTTCGATCAGTCAAATTAGAGAAATGTAAGGAATAATTGGAAACAAACCCATTTTGACCTCATACCCATGTCGTATACTGAACTCTTGCCTCAACTATTAAAGAATCATCAAGTAGCCATTGTACCTCAAGAGCCTCTACAGCCACCGTATCCCAAGTGGTACGACCCGAGCGCAAGATGTGAATATCATGTTGGGCAGTTGGGCACTCTACTGAGAATTGTTTTCCTCTGAAGGCTAAGGTGCAAAGTTTGGTCAAGGTTGGATGACTAAAATTCAAGAAAACAGAGGAAGAGTCGGATGTTAACCGAAACCCTCTCCCAAATCACGAAGAGCCTGTTGTAAGTGATGTTGATACATTAGTAGAACGTTGCAAGGATAAAGTACATCACTTGACTACTTCGATGAGAGTTCTTTTTCAAATTCTTTATGAGGCTGGGTATCTATCACCAAGAGTTGACAGTAATGGGGGAAATGGGATAGGATACACTGTTGAGAAAGGATGTTTATTCCACCCTGAGGTAGATGGCCATTCCATAGAAGATTGTGTTGAGTTTAAGAGGGAAGTACAAAATTGATGGAGGCAAAGATTCTAATGGTAAAGTTAGACAGACTCCCAGGAAATCAAGGTTGATATGATTTCCAATGCCTTGTCTAATGAAAAAACCTCAAAGGAGGAATCATCTATACGAGAACCATTAATTATTCATTATGAAGAAAAATCCAATGTCACTTCTTGTATCCAGATGCCGAAGACAATGATTGTGAAGATACCAGGTCCCTTTGCTTATAAGGATAATCAAGTTGTACCATGGAAATATGAATGTCAGTTCATCACAAAGAGTGTTGGTGAAGGGTGACTCGTAGTGGAAGATTTTAGACACCAGATAACTTAAAGAATGTTCCGAAAGAGGATGAAGTTCGACAACGTAAGGGTAAAGTTATGGAAATAACAAGTGGGGATGATCTAAATGATTTGAGCAAAGTCTTTGCTGAAAATGCCACTCTAGTAAGAAGGAAGACAGACAACGAGTTCGTTTTCGAGGAAGAAGCTCGTGAGTTTTTGAAGTTGATAAAGCAGAGTGAGTATTAAGTGATTGAGCAATTACATCATATCCCAACTCATATATCAATTTTGTCATTATTCTTGCATTTTGAACCACACCGCAAGGTTTTGCTGAACATCTTAAATCAAGCACATGTAGGTCAAGATATTTTAGTAAATGCCCTTAGCGAAATTGTGGAAAATAAAACTGCCACAAACTGCATCTCATTTACAGATAAAGAAACCCTTCTTGAAGGTATTGGGCATACAAAGGCATTACACATATTTGTGAAATGTAAAAACTACCATGTGGTTAGGGTTCTTGTTGATAATGGGTCATCTCTAAACGAGATCTACTTTGATGAAACTCCCTATAGATCTCTTCTACTTAAAGTCAAGTACCATGGTAGTCAGAGCTTTCGACGACGCTCGTAGGGAGGTAATTGGAGATATAAAGATTCCATTTAAAATTGGACCATCTACCTTCAACGTACCATTTCAAGTATTGGATGTAAACTCTTCGTATAGTTGTTTGTTTGGACGACCTTGGATTCATTCAGCTAGGTCAGTCTCGTCTTCACTACATGAGAGGGTAAAGTTTAATGTGGAAGATGATTAGGCCATTGTCTATGGGGAGGAGGACATGTCTATGGGGAGGAGCACTTCCTTATGTTGAAGCAGCCAAGGAAGCTTTTGAGTGCTCATACAGATCGTTTGAGGTCGCCAATGCTACTATCTTTCCAACTGAAGGTTTAGATCTAGATCGCTATATGTCAAGAACTTCTCTAATGATTGCAAAGACGATAATAAGAAGTGATTTTCAAATGAACATAGGATTGGGGAAGAATAATCAAGGAAACAAAGAGTTGATCTCTCTTTCTAAAGCTAAAAAGAGGTTAGAATTGGGATATAAGCCGATGGCTTTTGAGTAGGAGAAAGTCCAGGCTGAGAAGAAGGAAAAGAGAAGTGCAGGTCTCGAAGGACGTGAATTTGAGCAAAGAAAACTGAATATACCTCACCTATATGAAACTTTCAAGTCGGGAGAAATGCTTTTCAACAACAACCAGTCAAGGGAATGCAAGAAAAGTATTGAAGCCTCGATCACTGTTATCTTAGAGAGCACTCCTTTGGCCCGCCAATTGGTTTATCCTTGCCTACCAGAGTTTGTGTTGGGCAATTAGGAGATAAAAAAGATACCAAAAGTTATAAAAGGATTACCAAAGTAATGACACACCCTTTGGCTATGCCTAAGGCCACAGAGGTATCTTTGTAATAAGGGCATCCTTTAATGCTTTTGTCTTAAGAAATTATATTTCTCTTTTATCTTAAGAAATTGTATTTCTTTTAATATCTAGTAGCTACGTGTACCCTTTTTTTTTTTAGAAATGAAAAGAGATGATTAAAAATTTCTTTTTGTCCCAATCACTATGTCTATTCCTTTTGCTTCGAAGCATGATATTATATTTCGCTTCTTTTCGCCTCCTCTACCTCTTACTAATATAATTTAGGGTTCATAACAGGGATGTTGGAGACGAAAACATCAATTTAATTGTTGATCTTGAAGTTCTGATCTATAATCTCGAACAAAATGTGGAGGACAAATGCGATGTATCATCCGAGTTACTCAAGATGAGAGAGCAAGAGGAAAAGAAGACGGTACCATATCAAGAACCTTTAGAAGTTATTAATTTGGGGACACTAGAAGAGGTGAAAGAAGTGCAAATTGGCACTTTGGCCTCGAAGCAAGATCGTACAAATCTTATGGCTTTGCTTTAGGAATATAAAGAAATATTTGCATAGTCCTACCACGATATGCCTGGTTTAGATATAGAGATCGCGATGCATCGATTGCCATAAAGCTTGAATGTAGGCCCATACGACAAAAACTTCGCAAAATGAAGCCTGAAATGCTAATCAAGATTAAGGAGAAGTTTAAAAAACAATGCGATGCAAGATTCTTAGCAGCTAAATACCCAAAGTGGGTTGCAAATATTGTCCCGGTTCCAAAGAAAGATGAAAAGGTCAGAATGTGTGTTAACTACAAAGATCTAAATCGTGCCAGTCCAAAGGACAATTTTTCCCTTCCTCACATTGACGTGTTAGTAGATAATACTGCTGGATATTCTACATTCTCATTTATGAATGGATTCTCAGGATACAACCAAATCAAGATGGTCCTGAAAGATCAATAAAAGAAAACATTCATTACTTTATGGGGGATTTTTTGCTATAAAGTTATGCCTTTTGGTTTAAAAAATGCAGGAGCAACTTACTAGAGTGAGATATGAAGCCACCGAAGACCCGAAAGGAGGTTAGAAGTTTCTTGAGGAGGTTAAATTACATTGCATGATTTATTTCACACTTTACTCAAACCTGCAAGCCAATTCTAAGACTCCTTCGCATGAGTGAGATATGTCGCTGGAACGATGATTGCCAAAGGGCTTTTAATAAAATCAAAGATTATTTGCAAAGCCCCCGATACTTGTCCCACCAACTTCAAGACGACCATTAATCTTATACCTGATAGTAAAGGAAAGGTCAATGGGATGTGTGCTGGGCAACATGACTCTATAGGAAGGAAAGAGCGAGTTGTTTATTATTTGAGCAAGAAGTTCATAAGTTATGAGTCAAAGTACTCGTTGTTGGAAAAAACATGTGGTGCCTTAGCATGGAGAGCTCAAAGATGA

mRNA sequence

ATGGGATCTCGCATTAAGATGAATCCTGGAAGTAAAGAATGGAATGATTACGGATTTTGCTTCAAAATCAAGGAAAATGATGACCCCAAAGAAAAAGGAGGGAGAAGTACACAAGTTGAGCTCGACTCAAAGAAACGTTGCAAGGATAAAGTACATCACTTGACTACTTCGATGAGAGTTCTTTTTCAAATTCTTTATGAGGCTGGGTATCTATCACCAAGAGTTGACAGTAATGGGGGAAATGGGATAGGATACACTGTTGAGAAAGGATGTTTATTCCACCCTGAGGTAGATGGCCATTCCATAGAAGATTGTGTTGAGTTTAAGAGGGAAACAGACTCCCAGGAAATCAAGGTTGATATGATTTCCAATGCCTTGTCTAATGAAAAAACCTCAAAGGAGGAATCATCTATACGAGAACCATTAATTATTCATTATGAAGAAAAATCCAATGTCACTTCTTGTATCCAGATGCCGAAGACAATGATTGTGAAGATACCAGGTCCCTTTGCTTATAAGGATAATCAAGTTGTACCATGGAAATATGAATGTCAGTTCATCACAAAGAGTACACCAGATAACTTAAAGAATGTTCCGAAAGAGGATGAAGTTCGACAACGTAAGGGTAAAGTTATGGAAATAACAAGTGGGGATGATCTAAATGATTTGAGCAAAGTCTTTGCTGAAAATGCCACTCTAGTAAGAAGGAAGACAGACAACGAGTTCGTTTTCGAGGAAGAAGCTCGTGAGTTTTTGAAGTTGATAAAGCAGAATCTCTTCTACTTAAAGTCAAGTACCATGGTAGTCAGAGCTTTCGACGACGCTCGTAGGGAGGTAATTGGAGATATAAAGATTCCATTTAAAATTGGACCATCTACCTTCAACGTACCATTTCAAGTATTGGATGTAAACTCTTCGTATAGTTGTTTGTTTGGACGACCTTGGATTCATTCAGCTAGGTCAGTCTCGTCTTCACTACATGAGAGGATGATTAGGCCATTGTCTATGGGGAGGAGGACATGTCTATGGGGAGGAGCACTTCCTTATGTTGAAGCAGCCAAGGAAGCTTTTGAGTGCTCATACAGATCGTTTGAGGTCGCCAATGCTACTATCTTTCCAACTGAAGGTTTAGATCTAGATCGCTATATGTCAAGAACTTCTCTAATGATTGCAAAGACGATAATAAGAAGTGATTTTCAAATGAACATAGGATTGGGGAAGAATAATCAAGGAAACAAAGAGTTGATCTCTCTTTCTAAAGCTAAAAAGAGGTTAGAATTGGGATATAAGCCGATGGCTTTTGAGGATGTTGGAGACGAAAACATCAATTTAATTGTTGATCTTGAAGTTCTGATCTATAATCTCGAACAAAATGTGGAGGACAAATGCGATGTATCATCCGAGTTACTCAAGATGAGAGAGCAAGAGGAAAAGAAGACGATTATTTGCAAAGCCCCCGATACTTGTCCCACCAACTTCAAGACGACCATTAATCTTATACCTGATAGTAAAGGAAAGGTCAATGGGATGTGTGCTGGGCAACATGACTCTATAGGAAGGAAAGAGCGAGTTGTTTATTATTTGAGCAAGAAGTTCATAAGTTATGAGTCAAAGTACTCGTTGTTGGAAAAAACATGTGGTGCCTTAGCATGGAGAGCTCAAAGATGA

Coding sequence (CDS)

ATGGGATCTCGCATTAAGATGAATCCTGGAAGTAAAGAATGGAATGATTACGGATTTTGCTTCAAAATCAAGGAAAATGATGACCCCAAAGAAAAAGGAGGGAGAAGTACACAAGTTGAGCTCGACTCAAAGAAACGTTGCAAGGATAAAGTACATCACTTGACTACTTCGATGAGAGTTCTTTTTCAAATTCTTTATGAGGCTGGGTATCTATCACCAAGAGTTGACAGTAATGGGGGAAATGGGATAGGATACACTGTTGAGAAAGGATGTTTATTCCACCCTGAGGTAGATGGCCATTCCATAGAAGATTGTGTTGAGTTTAAGAGGGAAACAGACTCCCAGGAAATCAAGGTTGATATGATTTCCAATGCCTTGTCTAATGAAAAAACCTCAAAGGAGGAATCATCTATACGAGAACCATTAATTATTCATTATGAAGAAAAATCCAATGTCACTTCTTGTATCCAGATGCCGAAGACAATGATTGTGAAGATACCAGGTCCCTTTGCTTATAAGGATAATCAAGTTGTACCATGGAAATATGAATGTCAGTTCATCACAAAGAGTACACCAGATAACTTAAAGAATGTTCCGAAAGAGGATGAAGTTCGACAACGTAAGGGTAAAGTTATGGAAATAACAAGTGGGGATGATCTAAATGATTTGAGCAAAGTCTTTGCTGAAAATGCCACTCTAGTAAGAAGGAAGACAGACAACGAGTTCGTTTTCGAGGAAGAAGCTCGTGAGTTTTTGAAGTTGATAAAGCAGAATCTCTTCTACTTAAAGTCAAGTACCATGGTAGTCAGAGCTTTCGACGACGCTCGTAGGGAGGTAATTGGAGATATAAAGATTCCATTTAAAATTGGACCATCTACCTTCAACGTACCATTTCAAGTATTGGATGTAAACTCTTCGTATAGTTGTTTGTTTGGACGACCTTGGATTCATTCAGCTAGGTCAGTCTCGTCTTCACTACATGAGAGGATGATTAGGCCATTGTCTATGGGGAGGAGGACATGTCTATGGGGAGGAGCACTTCCTTATGTTGAAGCAGCCAAGGAAGCTTTTGAGTGCTCATACAGATCGTTTGAGGTCGCCAATGCTACTATCTTTCCAACTGAAGGTTTAGATCTAGATCGCTATATGTCAAGAACTTCTCTAATGATTGCAAAGACGATAATAAGAAGTGATTTTCAAATGAACATAGGATTGGGGAAGAATAATCAAGGAAACAAAGAGTTGATCTCTCTTTCTAAAGCTAAAAAGAGGTTAGAATTGGGATATAAGCCGATGGCTTTTGAGGATGTTGGAGACGAAAACATCAATTTAATTGTTGATCTTGAAGTTCTGATCTATAATCTCGAACAAAATGTGGAGGACAAATGCGATGTATCATCCGAGTTACTCAAGATGAGAGAGCAAGAGGAAAAGAAGACGATTATTTGCAAAGCCCCCGATACTTGTCCCACCAACTTCAAGACGACCATTAATCTTATACCTGATAGTAAAGGAAAGGTCAATGGGATGTGTGCTGGGCAACATGACTCTATAGGAAGGAAAGAGCGAGTTGTTTATTATTTGAGCAAGAAGTTCATAAGTTATGAGTCAAAGTACTCGTTGTTGGAAAAAACATGTGGTGCCTTAGCATGGAGAGCTCAAAGATGA

Protein sequence

MGSRIKMNPGSKEWNDYGFCFKIKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNGIGYTVEKGCLFHPEVDGHSIEDCVEFKRETDSQEIKVDMISNALSNEKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFITKSTPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENATLVRRKTDNEFVFEEEAREFLKLIKQNLFYLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNVPFQVLDVNSSYSCLFGRPWIHSARSVSSSLHERMIRPLSMGRRTCLWGGALPYVEAAKEAFECSYRSFEVANATIFPTEGLDLDRYMSRTSLMIAKTIIRSDFQMNIGLGKNNQGNKELISLSKAKKRLELGYKPMAFEDVGDENINLIVDLEVLIYNLEQNVEDKCDVSSELLKMREQEEKKTIICKAPDTCPTNFKTTINLIPDSKGKVNGMCAGQHDSIGRKERVVYYLSKKFISYESKYSLLEKTCGALAWRAQR
Homology
BLAST of Lsi03G006880 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 3.0e-118
Identity = 260/568 (45.77%), Postives = 319/568 (56.16%), Query Frame = 0

Query: 23   IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
            + +N  P  +G     V+    +R K+KV  + TSM+ LFQIL+ AGYLSPR +++    
Sbjct: 476  VNQNPLPNHEGPSINAVD-TFIQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 535

Query: 83   IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
            IG T  + CLFHPE + HSIEDC EFK E                 QEI+V+MI+NA SN
Sbjct: 536  IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSN 595

Query: 143  EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
            EKTS E + + +P +IHYEEK ++ S IQ PK M V+IPGPFAYKDN  VPWKYECQFIT
Sbjct: 596  EKTSNETTFMWKPFVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 655

Query: 203  KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
             +                TPDNLK+V KEDEVR+RKGK +E+   DDLNDLSKVF +  T
Sbjct: 656  DNVVSATVGGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTKKNT 715

Query: 263  LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
            LV ++TD+E V +EEA EFLKLIKQ+ +                                
Sbjct: 716  LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDI 775

Query: 323  ------------------------------------------------------------ 382
                                                                        
Sbjct: 776  LNRAHVGHDISVNALSEIVENIIATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 835

Query: 383  ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 436
                                    YL+ STMVVRAFD ARREVIGDI IP KIGPSTFNV
Sbjct: 836  LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNV 895

BLAST of Lsi03G006880 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 7.2e-112
Identity = 253/559 (45.26%), Postives = 307/559 (54.92%), Query Frame = 0

Query: 23   IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
            + +N  P  +G     V+    +R K+KV  + TSM+ LFQIL+ AGYLSPR +++    
Sbjct: 476  VNQNPLPNHEGPIINAVD-TFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 535

Query: 83   IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
            IG T  + CLFHPE + HSIEDC EFK E                 QEI+V+MI+NA SN
Sbjct: 536  IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSN 595

Query: 143  EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
            EKTS E + + +PL+IHYEEK ++ S IQ PK M V+IPGPFAYKDN  VPWKYECQFIT
Sbjct: 596  EKTSNETTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 655

Query: 203  KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
             +                TPDNLK+V KEDEVR+RKGK +E+   DDLNDLSKVF E  T
Sbjct: 656  DNVVFATVEGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNT 715

Query: 263  LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
            LV ++TD+E V +EEA EFLKLIKQ+ +                                
Sbjct: 716  LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFTYSEPHRKVLLDI 775

Query: 323  ------------------------------------------------------------ 382
                                                                        
Sbjct: 776  LNRAHVGHDISVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 835

Query: 383  ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 436
                                    YL+ STMVVRAFD ARREVIGDI IP KIGPSTFNV
Sbjct: 836  LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNV 895

BLAST of Lsi03G006880 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-10
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 0

Query: 490  PTNFKTTINLIPDSKGKVNGMCAGQHDSIGRKERVVYYLSKKFISYESKYSLLEKTCGAL 549
            PT  +  I  +   +G + G   GQHDS G+KE+ VYYLSKKF +YESKYSLLEKTC AL
Sbjct: 1492 PTPGRPLIFCLTVKEGSM-GCVLGQHDSTGKKEQAVYYLSKKFTNYESKYSLLEKTCCAL 1551

Query: 550  AWRAQR 556
            AW  QR
Sbjct: 1552 AWTTQR 1556


HSP 2 Score: 410.2 bits (1053), Expect = 1.4e-110
Identity = 244/520 (46.92%), Postives = 307/520 (59.04%), Query Frame = 0

Query: 23  IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
           + +N  P  KG     +++  +K  K++V  +TTSM  LFQIL+  GYLSPR +++    
Sbjct: 137 VNQNLLPIHKGPVINAIDIFIEKH-KNRVSDVTTSMNTLFQILHVVGYLSPRFNNDDEEK 196

Query: 83  IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
           IG T ++ CLFHPE + H IEDC EFK E                 QEI+V+MI++A SN
Sbjct: 197 IGCTNKEQCLFHPETNDHFIEDCCEFKNEVQKLMDAKILLVGQMSMQEIEVNMITDASSN 256

Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
           +KTS E +SI +PL+IHYEEK ++ S IQ PK M ++IPGPFAYKDN VVP KYE QFI 
Sbjct: 257 KKTSNETTSIWKPLVIHYEEKPSIMSYIQKPKAMTIEIPGPFAYKDNHVVPCKYEYQFIP 316

Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
            +                T DNLK+V KEDEVR+RKGK +E+   DDLNDLSKVF E  T
Sbjct: 317 DNVVSTTIGGITRRRRCYTLDNLKDVLKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEQTT 376

Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
           LV+++TD E V +EEA EFLKLIKQ+ +                                
Sbjct: 377 LVQKETDREVVSKEEACEFLKLIKQSEYKVIEQLRRTPACISIISLPYEEILPEGIGHTK 436

Query: 323 ----------------------------------------YLKSSTMVVRAFDDARREVI 382
                                                   YL+ STMVVRAFD A REVI
Sbjct: 437 TLHISVKCKDHYVARVLVDNGSSLNIMSRSTLTKLPIDPSYLRPSTMVVRAFDSAHREVI 496

Query: 383 GDIKIPFKIGPSTFNVPFQVLDVNSSYSCLFGRPWIHSARSVSSSLHERMIRPLSMGRRT 432
            DI IP KIGPSTFN+ FQV+D NSSYSCL G+PWIHS  +V  SLH+R ++    G + 
Sbjct: 497 EDIDIPLKIGPSTFNISFQVIDANSSYSCLLGQPWIHSVEAVPFSLHQR-VKFSVEGGQA 556

BLAST of Lsi03G006880 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.0e-106
Identity = 236/481 (49.06%), Postives = 295/481 (61.33%), Query Frame = 0

Query: 23   IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
            + +N  P  +G     V+    +R K+KV  + TSM+ LFQIL+ AGYLSPR +++    
Sbjct: 1037 VNQNPLPNHEGPSINAVD-TFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 1096

Query: 83   IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
            IG T  + CL HPE + HSIEDC EFK E                 Q+I+V+MI+NA SN
Sbjct: 1097 IGCTNNEQCLLHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQKIEVNMITNASSN 1156

Query: 143  EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
            EKTS E + + +PL+IHYEEK ++ S IQ PK M V+IP                   IT
Sbjct: 1157 EKTSNETTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIP----------------VGGIT 1216

Query: 203  KS----TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENATLVRRKTDNEFVF 262
            +S    TPDNLK+V KEDEVR+RKGK +E+   DDLNDLSKVF E  TLV ++TD+E V 
Sbjct: 1217 RSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNTLVEKETDHEVVS 1276

Query: 263  EEEA-----------------------------------------REFLKLIKQNLFYLK 322
            +EEA                                         R  L  +  +  YL+
Sbjct: 1277 KEEAYEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLR 1336

Query: 323  SSTMVVRAFDDARREVIGDIKIPFKIGPSTFNVPFQVLDVNSSYSCLFGRPWIHSARSVS 382
             STMVVRAFD A REVIGDI IP KIGPSTFNV FQV+D+NS YSCL GRPWIHSA +V 
Sbjct: 1337 PSTMVVRAFDSACREVIGDIDIPLKIGPSTFNVSFQVMDINSLYSCLLGRPWIHSAGAVP 1396

Query: 383  SSLHERMIRPLSMGRRTCLWG---------GALPYVEAAKEAFECSYRSFEVANATIFPT 436
            SSLH+R+   +  G +  ++G           LPYVEA +EA ECSYRSFE ANATIFPT
Sbjct: 1397 SSLHQRLKFSVE-GGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEFANATIFPT 1456

BLAST of Lsi03G006880 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-09
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 0

Query: 461  DKCDVSSELLKMREQEEKKTIICKAPD-TCPTNFKTTINLIPDSKGKVNGMCAGQHDSIG 520
            DK     +L   + Q+E K  +   P    PT  +  I  +   +G + G   GQ DS G
Sbjct: 1931 DKIKAIVDLRSPKTQKEIKDYLQSPPILVSPTPGRPLILYLTVKEGSM-GCVLGQRDSTG 1990

Query: 521  RKERVVYYLSKKFISYESKYSLLEKTCGALAWRAQR 556
            +KE+ VYYLSKKF +YESKYSLLEKTC  LAW  QR
Sbjct: 1991 KKEQAVYYLSKKFTNYESKYSLLEKTCCVLAWTTQR 2025


HSP 2 Score: 385.2 bits (988), Expect = 4.7e-103
Identity = 235/532 (44.17%), Postives = 289/532 (54.32%), Query Frame = 0

Query: 23  IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
           + +N  P  +G     V+    +R K+KV  + TSM+ LFQIL+ +GYLSPR +++    
Sbjct: 230 VNQNPLPNHEGPSINAVD-TFMQRHKNKVSDVATSMKTLFQILHGSGYLSPRFNNDDRKK 289

Query: 83  IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
           IG T  + CLFHPE + HSIEDC EFK E                 QEI+V+MI+NA SN
Sbjct: 290 IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMNSKILLIGQMSMQEIEVNMITNASSN 349

Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
           EKTS E + + +PL+IHYEEKS++ S IQ PK M V+IPGPFAYKDN  VPWKYECQFIT
Sbjct: 350 EKTSNETTFMWKPLVIHYEEKSSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 409

Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
            +                T DNLK+V KEDEVR+RKGK +E+   DDLNDLSKVF E  T
Sbjct: 410 DNVVSATVGGITRSGRCYTLDNLKDVSKEDEVRRRKGKAIEMACEDDLNDLSKVFTEKNT 469

Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
           LV ++TD+E V +EEA EFLKLIKQ+ +                                
Sbjct: 470 LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTSARISMLSLFMYSEPHRKVLLDI 529

Query: 323 ------------------------------------------------------------ 382
                                                                       
Sbjct: 530 LNRAHVGHDISVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 589

Query: 383 ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 400
                                   YL+ STMVVRAFD ARREVI DI IP KIGPSTFN+
Sbjct: 590 LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIEDIDIPLKIGPSTFNI 649

BLAST of Lsi03G006880 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 435.6 bits (1119), Expect = 6.2e-118
Identity = 260/568 (45.77%), Postives = 319/568 (56.16%), Query Frame = 0

Query: 23   IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
            + +N  P  +G     V+    +R K+KV  + TSM+ LFQIL+ AGYLSPR +++    
Sbjct: 476  VNQNPLPNHEGPSINAVD-TFIQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 535

Query: 83   IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
            IG T  + CLFHPE + HSIEDC EFK E                 QEI+V+MI+NA SN
Sbjct: 536  IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSN 595

Query: 143  EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
            EKTS E + + +P +IHYEEK ++ S IQ PK M V+IPGPFAYKDN  VPWKYECQFIT
Sbjct: 596  EKTSNETTFMWKPFVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 655

Query: 203  KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
             +                TPDNLK+V KEDEVR+RKGK +E+   DDLNDLSKVF +  T
Sbjct: 656  DNVVSATVGGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTKKNT 715

Query: 263  LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
            LV ++TD+E V +EEA EFLKLIKQ+ +                                
Sbjct: 716  LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDI 775

Query: 323  ------------------------------------------------------------ 382
                                                                        
Sbjct: 776  LNRAHVGHDISVNALSEIVENIIATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 835

Query: 383  ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 436
                                    YL+ STMVVRAFD ARREVIGDI IP KIGPSTFNV
Sbjct: 836  LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNV 895

BLAST of Lsi03G006880 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 414.5 bits (1064), Expect = 1.5e-111
Identity = 253/559 (45.26%), Postives = 307/559 (54.92%), Query Frame = 0

Query: 23   IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
            + +N  P  +G     V+    +R K+KV  + TSM+ LFQIL+ AGYLSPR +++    
Sbjct: 476  VNQNPLPNHEGPIINAVD-TFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 535

Query: 83   IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
            IG T  + CLFHPE + HSIEDC EFK E                 QEI+V+MI+NA SN
Sbjct: 536  IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSN 595

Query: 143  EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
            EKTS E + + +PL+IHYEEK ++ S IQ PK M V+IPGPFAYKDN  VPWKYECQFIT
Sbjct: 596  EKTSNETTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 655

Query: 203  KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
             +                TPDNLK+V KEDEVR+RKGK +E+   DDLNDLSKVF E  T
Sbjct: 656  DNVVFATVEGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNT 715

Query: 263  LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
            LV ++TD+E V +EEA EFLKLIKQ+ +                                
Sbjct: 716  LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFTYSEPHRKVLLDI 775

Query: 323  ------------------------------------------------------------ 382
                                                                        
Sbjct: 776  LNRAHVGHDISVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 835

Query: 383  ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 436
                                    YL+ STMVVRAFD ARREVIGDI IP KIGPSTFNV
Sbjct: 836  LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNV 895

BLAST of Lsi03G006880 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 7.3e-10
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 0

Query: 490  PTNFKTTINLIPDSKGKVNGMCAGQHDSIGRKERVVYYLSKKFISYESKYSLLEKTCGAL 549
            PT  +  I  +   +G + G   GQHDS G+KE+ VYYLSKKF +YESKYSLLEKTC AL
Sbjct: 1492 PTPGRPLIFCLTVKEGSM-GCVLGQHDSTGKKEQAVYYLSKKFTNYESKYSLLEKTCCAL 1551

Query: 550  AWRAQR 556
            AW  QR
Sbjct: 1552 AWTTQR 1556


HSP 2 Score: 410.2 bits (1053), Expect = 2.8e-110
Identity = 244/520 (46.92%), Postives = 307/520 (59.04%), Query Frame = 0

Query: 23  IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
           + +N  P  KG     +++  +K  K++V  +TTSM  LFQIL+  GYLSPR +++    
Sbjct: 137 VNQNLLPIHKGPVINAIDIFIEKH-KNRVSDVTTSMNTLFQILHVVGYLSPRFNNDDEEK 196

Query: 83  IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
           IG T ++ CLFHPE + H IEDC EFK E                 QEI+V+MI++A SN
Sbjct: 197 IGCTNKEQCLFHPETNDHFIEDCCEFKNEVQKLMDAKILLVGQMSMQEIEVNMITDASSN 256

Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
           +KTS E +SI +PL+IHYEEK ++ S IQ PK M ++IPGPFAYKDN VVP KYE QFI 
Sbjct: 257 KKTSNETTSIWKPLVIHYEEKPSIMSYIQKPKAMTIEIPGPFAYKDNHVVPCKYEYQFIP 316

Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
            +                T DNLK+V KEDEVR+RKGK +E+   DDLNDLSKVF E  T
Sbjct: 317 DNVVSTTIGGITRRRRCYTLDNLKDVLKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEQTT 376

Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
           LV+++TD E V +EEA EFLKLIKQ+ +                                
Sbjct: 377 LVQKETDREVVSKEEACEFLKLIKQSEYKVIEQLRRTPACISIISLPYEEILPEGIGHTK 436

Query: 323 ----------------------------------------YLKSSTMVVRAFDDARREVI 382
                                                   YL+ STMVVRAFD A REVI
Sbjct: 437 TLHISVKCKDHYVARVLVDNGSSLNIMSRSTLTKLPIDPSYLRPSTMVVRAFDSAHREVI 496

Query: 383 GDIKIPFKIGPSTFNVPFQVLDVNSSYSCLFGRPWIHSARSVSSSLHERMIRPLSMGRRT 432
            DI IP KIGPSTFN+ FQV+D NSSYSCL G+PWIHS  +V  SLH+R ++    G + 
Sbjct: 497 EDIDIPLKIGPSTFNISFQVIDANSSYSCLLGQPWIHSVEAVPFSLHQR-VKFSVEGGQA 556

BLAST of Lsi03G006880 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 4.2e-106
Identity = 236/481 (49.06%), Postives = 295/481 (61.33%), Query Frame = 0

Query: 23   IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
            + +N  P  +G     V+    +R K+KV  + TSM+ LFQIL+ AGYLSPR +++    
Sbjct: 1037 VNQNPLPNHEGPSINAVD-TFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 1096

Query: 83   IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
            IG T  + CL HPE + HSIEDC EFK E                 Q+I+V+MI+NA SN
Sbjct: 1097 IGCTNNEQCLLHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQKIEVNMITNASSN 1156

Query: 143  EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
            EKTS E + + +PL+IHYEEK ++ S IQ PK M V+IP                   IT
Sbjct: 1157 EKTSNETTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIP----------------VGGIT 1216

Query: 203  KS----TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENATLVRRKTDNEFVF 262
            +S    TPDNLK+V KEDEVR+RKGK +E+   DDLNDLSKVF E  TLV ++TD+E V 
Sbjct: 1217 RSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNTLVEKETDHEVVS 1276

Query: 263  EEEA-----------------------------------------REFLKLIKQNLFYLK 322
            +EEA                                         R  L  +  +  YL+
Sbjct: 1277 KEEAYEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLR 1336

Query: 323  SSTMVVRAFDDARREVIGDIKIPFKIGPSTFNVPFQVLDVNSSYSCLFGRPWIHSARSVS 382
             STMVVRAFD A REVIGDI IP KIGPSTFNV FQV+D+NS YSCL GRPWIHSA +V 
Sbjct: 1337 PSTMVVRAFDSACREVIGDIDIPLKIGPSTFNVSFQVMDINSLYSCLLGRPWIHSAGAVP 1396

Query: 383  SSLHERMIRPLSMGRRTCLWG---------GALPYVEAAKEAFECSYRSFEVANATIFPT 436
            SSLH+R+   +  G +  ++G           LPYVEA +EA ECSYRSFE ANATIFPT
Sbjct: 1397 SSLHQRLKFSVE-GGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEFANATIFPT 1456

BLAST of Lsi03G006880 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 6.2e-09
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 0

Query: 461  DKCDVSSELLKMREQEEKKTIICKAPD-TCPTNFKTTINLIPDSKGKVNGMCAGQHDSIG 520
            DK     +L   + Q+E K  +   P    PT  +  I  +   +G + G   GQ DS G
Sbjct: 1931 DKIKAIVDLRSPKTQKEIKDYLQSPPILVSPTPGRPLILYLTVKEGSM-GCVLGQRDSTG 1990

Query: 521  RKERVVYYLSKKFISYESKYSLLEKTCGALAWRAQR 556
            +KE+ VYYLSKKF +YESKYSLLEKTC  LAW  QR
Sbjct: 1991 KKEQAVYYLSKKFTNYESKYSLLEKTCCVLAWTTQR 2025


HSP 2 Score: 385.2 bits (988), Expect = 9.6e-103
Identity = 235/532 (44.17%), Postives = 289/532 (54.32%), Query Frame = 0

Query: 23  IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
           + +N  P  +G     V+    +R K+KV  + TSM+ LFQIL+ +GYLSPR +++    
Sbjct: 230 VNQNPLPNHEGPSINAVD-TFMQRHKNKVSDVATSMKTLFQILHGSGYLSPRFNNDDRKK 289

Query: 83  IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
           IG T  + CLFHPE + HSIEDC EFK E                 QEI+V+MI+NA SN
Sbjct: 290 IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMNSKILLIGQMSMQEIEVNMITNASSN 349

Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
           EKTS E + + +PL+IHYEEKS++ S IQ PK M V+IPGPFAYKDN  VPWKYECQFIT
Sbjct: 350 EKTSNETTFMWKPLVIHYEEKSSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 409

Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
            +                T DNLK+V KEDEVR+RKGK +E+   DDLNDLSKVF E  T
Sbjct: 410 DNVVSATVGGITRSGRCYTLDNLKDVSKEDEVRRRKGKAIEMACEDDLNDLSKVFTEKNT 469

Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
           LV ++TD+E V +EEA EFLKLIKQ+ +                                
Sbjct: 470 LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTSARISMLSLFMYSEPHRKVLLDI 529

Query: 323 ------------------------------------------------------------ 382
                                                                       
Sbjct: 530 LNRAHVGHDISVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 589

Query: 383 ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 400
                                   YL+ STMVVRAFD ARREVI DI IP KIGPSTFN+
Sbjct: 590 LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIEDIDIPLKIGPSTFNI 649

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V6813.0e-11845.77Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7VAU57.2e-11245.26Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VAU53.5e-1059.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SUT02.0e-10649.06Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84... [more]
A0A5A7SUT03.0e-0945.83Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84... [more]
Match NameE-valueIdentityDescription
KAA0061241.16.2e-11845.77uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa][more]
KAA0065293.11.5e-11145.26uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa][more]
KAA0065293.17.3e-1059.09uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa][more]
KAA0033221.14.2e-10649.06uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa][more]
KAA0033221.16.2e-0945.83uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 249..333
e-value: 4.5E-5
score: 25.1
NoneNo IPR availablePANTHERPTHR33240OS08G0508500 PROTEINcoord: 262..370
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 25..256
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 262..370
NoneNo IPR availablePANTHERPTHR33240OS08G0508500 PROTEINcoord: 25..256
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 249..317
e-value: 2.24834E-6
score: 44.2496

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G006880.1Lsi03G006880.1mRNA