Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTATAGGGCAATACCTTGAGCGTTTTGGCTGCTACAATTAGATTTTAGAGTCATAGTTTTCTAAGGACATGCATTTCATCATCTTTACTTTTGTAGGATCTCGCATTAAGATGAATCCTGGAGTTTGTCATTTGGCATTCATTTGATTTTAATGAAAATGAAAGTTTGTTTTTCTTTCTGTTCTCTAGCTTTCTCTCTCTCTCTTTGGCAAATTAAATTATTATTTTCTTCTCTTGCACAAGAGACAAAAAGTTTTAAGCTTATAAAATAGCTTGAGGTTCACCTCCTCGCCATCCTTACTGGACGAGAAGAAATGCTAGAATAATGGATGAGCAATCTAACGATCAAGTTCAGCAGCCCGTCAGGATGTGGATGAGCTAAAAGAACAGTTAACAAAGATCCTAGAATTACTCACCGCGGGAAAAGGAAAGAATGTTGCAGGAACTTCAACACAAGTGGAAACTAGTTTAAATCAGACATTAGACGACATGCCTGTATACCCTCATGGTTTTACTCTCTAAAGGATGTCTAGTCCACACTTGGTAGGTGTGACATACCCTACTTCATTTCCTGCACACGAGTCTAATCAAACCTCGCAGTAGACAACTCGCATCGGTGATTCGGTATACACCCTAGTTATGGAGGGTGAAAAAAAGGTTTTAGAGGATTAGGGTAGCAGAAGAAGACTAGAGTTTCTAGAAGAAAGATTACGGGCAATTGAAGGTGCAGATATGTACCAGAACGTTGACGCAACACAGTTATGTTTGATTTTGATCCCTCCCAAATTTAAGACTTCAGATTTTTAAAAGTATAGCTGAACCACGTGCCCAAAAAACCACTTGGTTATGTATTTTCAAAAGATGTCAGCTTATGCTCATGATGACAAGTTATTGATTCGTTGATTTCAAGATAGTTTAGTTGGTCCGACCTCTCGTTGGTACATGCATTTGGATGGTTCACAAGTACACAAATGGAATGATCTCGCCGATTCCTTCCTAAAGCAGTATAAATACAATATTGATATGGCACCAGATCGTTTGGATCTTCAGAGATTGAAGAAGAAAAGTGTTGAAAGTTTTAAGGAGCACGCGCAACATTAAAGAGAAATGGCCGCACAAGTGTAGCCTCCGCTGACAAACAAAGAATTGATAGCTATATTCATAAATACTCTTAGCGCCCCATACTATGATAGGATGATTAGGAGTGCTTCGACTAATTTCTTGGACATAATAACATTGGGGAAATGATCGAATTCAGAGTAAAGAATGGAATGATTACGGATTTTGCTTCAAAATCAAGGAAAATGATGACCCCAAAGAAAAAGGAGGGAGAAGTACACAAGTTGAGCTCGACTCAAAGAGTAGTTGCACATGTGCCCTCACCAATCATTGGGCAAGCAAATTACTATGTTAATAATCAGAATAGAGATCAAAATCCTTTCGATCAGTCAAATTAGAGAAATGTAAGGAATAATTGGAAACAAACCCATTTTGACCTCATACCCATGTCGTATACTGAACTCTTGCCTCAACTATTAAAGAATCATCAAGTAGCCATTGTACCTCAAGAGCCTCTACAGCCACCGTATCCCAAGTGGTACGACCCGAGCGCAAGATGTGAATATCATGTTGGGCAGTTGGGCACTCTACTGAGAATTGTTTTCCTCTGAAGGCTAAGGTGCAAAGTTTGGTCAAGGTTGGATGACTAAAATTCAAGAAAACAGAGGAAGAGTCGGATGTTAACCGAAACCCTCTCCCAAATCACGAAGAGCCTGTTGTAAGTGATGTTGATACATTAGTAGAACGTTGCAAGGATAAAGTACATCACTTGACTACTTCGATGAGAGTTCTTTTTCAAATTCTTTATGAGGCTGGGTATCTATCACCAAGAGTTGACAGTAATGGGGGAAATGGGATAGGATACACTGTTGAGAAAGGATGTTTATTCCACCCTGAGGTAGATGGCCATTCCATAGAAGATTGTGTTGAGTTTAAGAGGGAAGTACAAAATTGATGGAGGCAAAGATTCTAATGGTAAAGTTAGACAGACTCCCAGGAAATCAAGGTTGATATGATTTCCAATGCCTTGTCTAATGAAAAAACCTCAAAGGAGGAATCATCTATACGAGAACCATTAATTATTCATTATGAAGAAAAATCCAATGTCACTTCTTGTATCCAGATGCCGAAGACAATGATTGTGAAGATACCAGGTCCCTTTGCTTATAAGGATAATCAAGTTGTACCATGGAAATATGAATGTCAGTTCATCACAAAGAGTGTTGGTGAAGGGTGACTCGTAGTGGAAGATTTTAGACACCAGATAACTTAAAGAATGTTCCGAAAGAGGATGAAGTTCGACAACGTAAGGGTAAAGTTATGGAAATAACAAGTGGGGATGATCTAAATGATTTGAGCAAAGTCTTTGCTGAAAATGCCACTCTAGTAAGAAGGAAGACAGACAACGAGTTCGTTTTCGAGGAAGAAGCTCGTGAGTTTTTGAAGTTGATAAAGCAGAGTGAGTATTAAGTGATTGAGCAATTACATCATATCCCAACTCATATATCAATTTTGTCATTATTCTTGCATTTTGAACCACACCGCAAGGTTTTGCTGAACATCTTAAATCAAGCACATGTAGGTCAAGATATTTTAGTAAATGCCCTTAGCGAAATTGTGGAAAATAAAACTGCCACAAACTGCATCTCATTTACAGATAAAGAAACCCTTCTTGAAGGTATTGGGCATACAAAGGCATTACACATATTTGTGAAATGTAAAAACTACCATGTGGTTAGGGTTCTTGTTGATAATGGGTCATCTCTAAACGAGATCTACTTTGATGAAACTCCCTATAGATCTCTTCTACTTAAAGTCAAGTACCATGGTAGTCAGAGCTTTCGACGACGCTCGTAGGGAGGTAATTGGAGATATAAAGATTCCATTTAAAATTGGACCATCTACCTTCAACGTACCATTTCAAGTATTGGATGTAAACTCTTCGTATAGTTGTTTGTTTGGACGACCTTGGATTCATTCAGCTAGGTCAGTCTCGTCTTCACTACATGAGAGGGTAAAGTTTAATGTGGAAGATGATTAGGCCATTGTCTATGGGGAGGAGGACATGTCTATGGGGAGGAGCACTTCCTTATGTTGAAGCAGCCAAGGAAGCTTTTGAGTGCTCATACAGATCGTTTGAGGTCGCCAATGCTACTATCTTTCCAACTGAAGGTTTAGATCTAGATCGCTATATGTCAAGAACTTCTCTAATGATTGCAAAGACGATAATAAGAAGTGATTTTCAAATGAACATAGGATTGGGGAAGAATAATCAAGGAAACAAAGAGTTGATCTCTCTTTCTAAAGCTAAAAAGAGGTTAGAATTGGGATATAAGCCGATGGCTTTTGAGTAGGAGAAAGTCCAGGCTGAGAAGAAGGAAAAGAGAAGTGCAGGTCTCGAAGGACGTGAATTTGAGCAAAGAAAACTGAATATACCTCACCTATATGAAACTTTCAAGTCGGGAGAAATGCTTTTCAACAACAACCAGTCAAGGGAATGCAAGAAAAGTATTGAAGCCTCGATCACTGTTATCTTAGAGAGCACTCCTTTGGCCCGCCAATTGGTTTATCCTTGCCTACCAGAGTTTGTGTTGGGCAATTAGGAGATAAAAAAGATACCAAAAGTTATAAAAGGATTACCAAAGTAATGACACACCCTTTGGCTATGCCTAAGGCCACAGAGGTATCTTTGTAATAAGGGCATCCTTTAATGCTTTTGTCTTAAGAAATTATATTTCTCTTTTATCTTAAGAAATTGTATTTCTTTTAATATCTAGTAGCTACGTGTACCCTTTTTTTTTTTAGAAATGAAAAGAGATGATTAAAAATTTCTTTTTGTCCCAATCACTATGTCTATTCCTTTTGCTTCGAAGCATGATATTATATTTCGCTTCTTTTCGCCTCCTCTACCTCTTACTAATATAATTTAGGGTTCATAACAGGGATGTTGGAGACGAAAACATCAATTTAATTGTTGATCTTGAAGTTCTGATCTATAATCTCGAACAAAATGTGGAGGACAAATGCGATGTATCATCCGAGTTACTCAAGATGAGAGAGCAAGAGGAAAAGAAGACGGTACCATATCAAGAACCTTTAGAAGTTATTAATTTGGGGACACTAGAAGAGGTGAAAGAAGTGCAAATTGGCACTTTGGCCTCGAAGCAAGATCGTACAAATCTTATGGCTTTGCTTTAGGAATATAAAGAAATATTTGCATAGTCCTACCACGATATGCCTGGTTTAGATATAGAGATCGCGATGCATCGATTGCCATAAAGCTTGAATGTAGGCCCATACGACAAAAACTTCGCAAAATGAAGCCTGAAATGCTAATCAAGATTAAGGAGAAGTTTAAAAAACAATGCGATGCAAGATTCTTAGCAGCTAAATACCCAAAGTGGGTTGCAAATATTGTCCCGGTTCCAAAGAAAGATGAAAAGGTCAGAATGTGTGTTAACTACAAAGATCTAAATCGTGCCAGTCCAAAGGACAATTTTTCCCTTCCTCACATTGACGTGTTAGTAGATAATACTGCTGGATATTCTACATTCTCATTTATGAATGGATTCTCAGGATACAACCAAATCAAGATGGTCCTGAAAGATCAATAAAAGAAAACATTCATTACTTTATGGGGGATTTTTTGCTATAAAGTTATGCCTTTTGGTTTAAAAAATGCAGGAGCAACTTACTAGAGTGAGATATGAAGCCACCGAAGACCCGAAAGGAGGTTAGAAGTTTCTTGAGGAGGTTAAATTACATTGCATGATTTATTTCACACTTTACTCAAACCTGCAAGCCAATTCTAAGACTCCTTCGCATGAGTGAGATATGTCGCTGGAACGATGATTGCCAAAGGGCTTTTAATAAAATCAAAGATTATTTGCAAAGCCCCCGATACTTGTCCCACCAACTTCAAGACGACCATTAATCTTATACCTGATAGTAAAGGAAAGGTCAATGGGATGTGTGCTGGGCAACATGACTCTATAGGAAGGAAAGAGCGAGTTGTTTATTATTTGAGCAAGAAGTTCATAAGTTATGAGTCAAAGTACTCGTTGTTGGAAAAAACATGTGGTGCCTTAGCATGGAGAGCTCAAAGATGA
mRNA sequence
ATGGGATCTCGCATTAAGATGAATCCTGGAAGTAAAGAATGGAATGATTACGGATTTTGCTTCAAAATCAAGGAAAATGATGACCCCAAAGAAAAAGGAGGGAGAAGTACACAAGTTGAGCTCGACTCAAAGAAACGTTGCAAGGATAAAGTACATCACTTGACTACTTCGATGAGAGTTCTTTTTCAAATTCTTTATGAGGCTGGGTATCTATCACCAAGAGTTGACAGTAATGGGGGAAATGGGATAGGATACACTGTTGAGAAAGGATGTTTATTCCACCCTGAGGTAGATGGCCATTCCATAGAAGATTGTGTTGAGTTTAAGAGGGAAACAGACTCCCAGGAAATCAAGGTTGATATGATTTCCAATGCCTTGTCTAATGAAAAAACCTCAAAGGAGGAATCATCTATACGAGAACCATTAATTATTCATTATGAAGAAAAATCCAATGTCACTTCTTGTATCCAGATGCCGAAGACAATGATTGTGAAGATACCAGGTCCCTTTGCTTATAAGGATAATCAAGTTGTACCATGGAAATATGAATGTCAGTTCATCACAAAGAGTACACCAGATAACTTAAAGAATGTTCCGAAAGAGGATGAAGTTCGACAACGTAAGGGTAAAGTTATGGAAATAACAAGTGGGGATGATCTAAATGATTTGAGCAAAGTCTTTGCTGAAAATGCCACTCTAGTAAGAAGGAAGACAGACAACGAGTTCGTTTTCGAGGAAGAAGCTCGTGAGTTTTTGAAGTTGATAAAGCAGAATCTCTTCTACTTAAAGTCAAGTACCATGGTAGTCAGAGCTTTCGACGACGCTCGTAGGGAGGTAATTGGAGATATAAAGATTCCATTTAAAATTGGACCATCTACCTTCAACGTACCATTTCAAGTATTGGATGTAAACTCTTCGTATAGTTGTTTGTTTGGACGACCTTGGATTCATTCAGCTAGGTCAGTCTCGTCTTCACTACATGAGAGGATGATTAGGCCATTGTCTATGGGGAGGAGGACATGTCTATGGGGAGGAGCACTTCCTTATGTTGAAGCAGCCAAGGAAGCTTTTGAGTGCTCATACAGATCGTTTGAGGTCGCCAATGCTACTATCTTTCCAACTGAAGGTTTAGATCTAGATCGCTATATGTCAAGAACTTCTCTAATGATTGCAAAGACGATAATAAGAAGTGATTTTCAAATGAACATAGGATTGGGGAAGAATAATCAAGGAAACAAAGAGTTGATCTCTCTTTCTAAAGCTAAAAAGAGGTTAGAATTGGGATATAAGCCGATGGCTTTTGAGGATGTTGGAGACGAAAACATCAATTTAATTGTTGATCTTGAAGTTCTGATCTATAATCTCGAACAAAATGTGGAGGACAAATGCGATGTATCATCCGAGTTACTCAAGATGAGAGAGCAAGAGGAAAAGAAGACGATTATTTGCAAAGCCCCCGATACTTGTCCCACCAACTTCAAGACGACCATTAATCTTATACCTGATAGTAAAGGAAAGGTCAATGGGATGTGTGCTGGGCAACATGACTCTATAGGAAGGAAAGAGCGAGTTGTTTATTATTTGAGCAAGAAGTTCATAAGTTATGAGTCAAAGTACTCGTTGTTGGAAAAAACATGTGGTGCCTTAGCATGGAGAGCTCAAAGATGA
Coding sequence (CDS)
ATGGGATCTCGCATTAAGATGAATCCTGGAAGTAAAGAATGGAATGATTACGGATTTTGCTTCAAAATCAAGGAAAATGATGACCCCAAAGAAAAAGGAGGGAGAAGTACACAAGTTGAGCTCGACTCAAAGAAACGTTGCAAGGATAAAGTACATCACTTGACTACTTCGATGAGAGTTCTTTTTCAAATTCTTTATGAGGCTGGGTATCTATCACCAAGAGTTGACAGTAATGGGGGAAATGGGATAGGATACACTGTTGAGAAAGGATGTTTATTCCACCCTGAGGTAGATGGCCATTCCATAGAAGATTGTGTTGAGTTTAAGAGGGAAACAGACTCCCAGGAAATCAAGGTTGATATGATTTCCAATGCCTTGTCTAATGAAAAAACCTCAAAGGAGGAATCATCTATACGAGAACCATTAATTATTCATTATGAAGAAAAATCCAATGTCACTTCTTGTATCCAGATGCCGAAGACAATGATTGTGAAGATACCAGGTCCCTTTGCTTATAAGGATAATCAAGTTGTACCATGGAAATATGAATGTCAGTTCATCACAAAGAGTACACCAGATAACTTAAAGAATGTTCCGAAAGAGGATGAAGTTCGACAACGTAAGGGTAAAGTTATGGAAATAACAAGTGGGGATGATCTAAATGATTTGAGCAAAGTCTTTGCTGAAAATGCCACTCTAGTAAGAAGGAAGACAGACAACGAGTTCGTTTTCGAGGAAGAAGCTCGTGAGTTTTTGAAGTTGATAAAGCAGAATCTCTTCTACTTAAAGTCAAGTACCATGGTAGTCAGAGCTTTCGACGACGCTCGTAGGGAGGTAATTGGAGATATAAAGATTCCATTTAAAATTGGACCATCTACCTTCAACGTACCATTTCAAGTATTGGATGTAAACTCTTCGTATAGTTGTTTGTTTGGACGACCTTGGATTCATTCAGCTAGGTCAGTCTCGTCTTCACTACATGAGAGGATGATTAGGCCATTGTCTATGGGGAGGAGGACATGTCTATGGGGAGGAGCACTTCCTTATGTTGAAGCAGCCAAGGAAGCTTTTGAGTGCTCATACAGATCGTTTGAGGTCGCCAATGCTACTATCTTTCCAACTGAAGGTTTAGATCTAGATCGCTATATGTCAAGAACTTCTCTAATGATTGCAAAGACGATAATAAGAAGTGATTTTCAAATGAACATAGGATTGGGGAAGAATAATCAAGGAAACAAAGAGTTGATCTCTCTTTCTAAAGCTAAAAAGAGGTTAGAATTGGGATATAAGCCGATGGCTTTTGAGGATGTTGGAGACGAAAACATCAATTTAATTGTTGATCTTGAAGTTCTGATCTATAATCTCGAACAAAATGTGGAGGACAAATGCGATGTATCATCCGAGTTACTCAAGATGAGAGAGCAAGAGGAAAAGAAGACGATTATTTGCAAAGCCCCCGATACTTGTCCCACCAACTTCAAGACGACCATTAATCTTATACCTGATAGTAAAGGAAAGGTCAATGGGATGTGTGCTGGGCAACATGACTCTATAGGAAGGAAAGAGCGAGTTGTTTATTATTTGAGCAAGAAGTTCATAAGTTATGAGTCAAAGTACTCGTTGTTGGAAAAAACATGTGGTGCCTTAGCATGGAGAGCTCAAAGATGA
Protein sequence
MGSRIKMNPGSKEWNDYGFCFKIKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNGIGYTVEKGCLFHPEVDGHSIEDCVEFKRETDSQEIKVDMISNALSNEKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFITKSTPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENATLVRRKTDNEFVFEEEAREFLKLIKQNLFYLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNVPFQVLDVNSSYSCLFGRPWIHSARSVSSSLHERMIRPLSMGRRTCLWGGALPYVEAAKEAFECSYRSFEVANATIFPTEGLDLDRYMSRTSLMIAKTIIRSDFQMNIGLGKNNQGNKELISLSKAKKRLELGYKPMAFEDVGDENINLIVDLEVLIYNLEQNVEDKCDVSSELLKMREQEEKKTIICKAPDTCPTNFKTTINLIPDSKGKVNGMCAGQHDSIGRKERVVYYLSKKFISYESKYSLLEKTCGALAWRAQR
Homology
BLAST of Lsi03G006880 vs. ExPASy TrEMBL
Match:
A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)
HSP 1 Score: 435.6 bits (1119), Expect = 3.0e-118
Identity = 260/568 (45.77%), Postives = 319/568 (56.16%), Query Frame = 0
Query: 23 IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
+ +N P +G V+ +R K+KV + TSM+ LFQIL+ AGYLSPR +++
Sbjct: 476 VNQNPLPNHEGPSINAVD-TFIQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 535
Query: 83 IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
IG T + CLFHPE + HSIEDC EFK E QEI+V+MI+NA SN
Sbjct: 536 IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSN 595
Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
EKTS E + + +P +IHYEEK ++ S IQ PK M V+IPGPFAYKDN VPWKYECQFIT
Sbjct: 596 EKTSNETTFMWKPFVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 655
Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
+ TPDNLK+V KEDEVR+RKGK +E+ DDLNDLSKVF + T
Sbjct: 656 DNVVSATVGGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTKKNT 715
Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
LV ++TD+E V +EEA EFLKLIKQ+ +
Sbjct: 716 LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDI 775
Query: 323 ------------------------------------------------------------ 382
Sbjct: 776 LNRAHVGHDISVNALSEIVENIIATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 835
Query: 383 ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 436
YL+ STMVVRAFD ARREVIGDI IP KIGPSTFNV
Sbjct: 836 LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNV 895
BLAST of Lsi03G006880 vs. ExPASy TrEMBL
Match:
A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)
HSP 1 Score: 414.5 bits (1064), Expect = 7.2e-112
Identity = 253/559 (45.26%), Postives = 307/559 (54.92%), Query Frame = 0
Query: 23 IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
+ +N P +G V+ +R K+KV + TSM+ LFQIL+ AGYLSPR +++
Sbjct: 476 VNQNPLPNHEGPIINAVD-TFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 535
Query: 83 IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
IG T + CLFHPE + HSIEDC EFK E QEI+V+MI+NA SN
Sbjct: 536 IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSN 595
Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
EKTS E + + +PL+IHYEEK ++ S IQ PK M V+IPGPFAYKDN VPWKYECQFIT
Sbjct: 596 EKTSNETTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 655
Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
+ TPDNLK+V KEDEVR+RKGK +E+ DDLNDLSKVF E T
Sbjct: 656 DNVVFATVEGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNT 715
Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
LV ++TD+E V +EEA EFLKLIKQ+ +
Sbjct: 716 LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFTYSEPHRKVLLDI 775
Query: 323 ------------------------------------------------------------ 382
Sbjct: 776 LNRAHVGHDISVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 835
Query: 383 ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 436
YL+ STMVVRAFD ARREVIGDI IP KIGPSTFNV
Sbjct: 836 LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNV 895
BLAST of Lsi03G006880 vs. ExPASy TrEMBL
Match:
A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 3.5e-10
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 0
Query: 490 PTNFKTTINLIPDSKGKVNGMCAGQHDSIGRKERVVYYLSKKFISYESKYSLLEKTCGAL 549
PT + I + +G + G GQHDS G+KE+ VYYLSKKF +YESKYSLLEKTC AL
Sbjct: 1492 PTPGRPLIFCLTVKEGSM-GCVLGQHDSTGKKEQAVYYLSKKFTNYESKYSLLEKTCCAL 1551
Query: 550 AWRAQR 556
AW QR
Sbjct: 1552 AWTTQR 1556
HSP 2 Score: 410.2 bits (1053), Expect = 1.4e-110
Identity = 244/520 (46.92%), Postives = 307/520 (59.04%), Query Frame = 0
Query: 23 IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
+ +N P KG +++ +K K++V +TTSM LFQIL+ GYLSPR +++
Sbjct: 137 VNQNLLPIHKGPVINAIDIFIEKH-KNRVSDVTTSMNTLFQILHVVGYLSPRFNNDDEEK 196
Query: 83 IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
IG T ++ CLFHPE + H IEDC EFK E QEI+V+MI++A SN
Sbjct: 197 IGCTNKEQCLFHPETNDHFIEDCCEFKNEVQKLMDAKILLVGQMSMQEIEVNMITDASSN 256
Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
+KTS E +SI +PL+IHYEEK ++ S IQ PK M ++IPGPFAYKDN VVP KYE QFI
Sbjct: 257 KKTSNETTSIWKPLVIHYEEKPSIMSYIQKPKAMTIEIPGPFAYKDNHVVPCKYEYQFIP 316
Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
+ T DNLK+V KEDEVR+RKGK +E+ DDLNDLSKVF E T
Sbjct: 317 DNVVSTTIGGITRRRRCYTLDNLKDVLKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEQTT 376
Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
LV+++TD E V +EEA EFLKLIKQ+ +
Sbjct: 377 LVQKETDREVVSKEEACEFLKLIKQSEYKVIEQLRRTPACISIISLPYEEILPEGIGHTK 436
Query: 323 ----------------------------------------YLKSSTMVVRAFDDARREVI 382
YL+ STMVVRAFD A REVI
Sbjct: 437 TLHISVKCKDHYVARVLVDNGSSLNIMSRSTLTKLPIDPSYLRPSTMVVRAFDSAHREVI 496
Query: 383 GDIKIPFKIGPSTFNVPFQVLDVNSSYSCLFGRPWIHSARSVSSSLHERMIRPLSMGRRT 432
DI IP KIGPSTFN+ FQV+D NSSYSCL G+PWIHS +V SLH+R ++ G +
Sbjct: 497 EDIDIPLKIGPSTFNISFQVIDANSSYSCLLGQPWIHSVEAVPFSLHQR-VKFSVEGGQA 556
BLAST of Lsi03G006880 vs. ExPASy TrEMBL
Match:
A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)
HSP 1 Score: 396.4 bits (1017), Expect = 2.0e-106
Identity = 236/481 (49.06%), Postives = 295/481 (61.33%), Query Frame = 0
Query: 23 IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
+ +N P +G V+ +R K+KV + TSM+ LFQIL+ AGYLSPR +++
Sbjct: 1037 VNQNPLPNHEGPSINAVD-TFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 1096
Query: 83 IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
IG T + CL HPE + HSIEDC EFK E Q+I+V+MI+NA SN
Sbjct: 1097 IGCTNNEQCLLHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQKIEVNMITNASSN 1156
Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
EKTS E + + +PL+IHYEEK ++ S IQ PK M V+IP IT
Sbjct: 1157 EKTSNETTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIP----------------VGGIT 1216
Query: 203 KS----TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENATLVRRKTDNEFVF 262
+S TPDNLK+V KEDEVR+RKGK +E+ DDLNDLSKVF E TLV ++TD+E V
Sbjct: 1217 RSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNTLVEKETDHEVVS 1276
Query: 263 EEEA-----------------------------------------REFLKLIKQNLFYLK 322
+EEA R L + + YL+
Sbjct: 1277 KEEAYEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLR 1336
Query: 323 SSTMVVRAFDDARREVIGDIKIPFKIGPSTFNVPFQVLDVNSSYSCLFGRPWIHSARSVS 382
STMVVRAFD A REVIGDI IP KIGPSTFNV FQV+D+NS YSCL GRPWIHSA +V
Sbjct: 1337 PSTMVVRAFDSACREVIGDIDIPLKIGPSTFNVSFQVMDINSLYSCLLGRPWIHSAGAVP 1396
Query: 383 SSLHERMIRPLSMGRRTCLWG---------GALPYVEAAKEAFECSYRSFEVANATIFPT 436
SSLH+R+ + G + ++G LPYVEA +EA ECSYRSFE ANATIFPT
Sbjct: 1397 SSLHQRLKFSVE-GGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEFANATIFPT 1456
BLAST of Lsi03G006880 vs. ExPASy TrEMBL
Match:
A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)
HSP 1 Score: 73.6 bits (179), Expect = 3.0e-09
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 0
Query: 461 DKCDVSSELLKMREQEEKKTIICKAPD-TCPTNFKTTINLIPDSKGKVNGMCAGQHDSIG 520
DK +L + Q+E K + P PT + I + +G + G GQ DS G
Sbjct: 1931 DKIKAIVDLRSPKTQKEIKDYLQSPPILVSPTPGRPLILYLTVKEGSM-GCVLGQRDSTG 1990
Query: 521 RKERVVYYLSKKFISYESKYSLLEKTCGALAWRAQR 556
+KE+ VYYLSKKF +YESKYSLLEKTC LAW QR
Sbjct: 1991 KKEQAVYYLSKKFTNYESKYSLLEKTCCVLAWTTQR 2025
HSP 2 Score: 385.2 bits (988), Expect = 4.7e-103
Identity = 235/532 (44.17%), Postives = 289/532 (54.32%), Query Frame = 0
Query: 23 IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
+ +N P +G V+ +R K+KV + TSM+ LFQIL+ +GYLSPR +++
Sbjct: 230 VNQNPLPNHEGPSINAVD-TFMQRHKNKVSDVATSMKTLFQILHGSGYLSPRFNNDDRKK 289
Query: 83 IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
IG T + CLFHPE + HSIEDC EFK E QEI+V+MI+NA SN
Sbjct: 290 IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMNSKILLIGQMSMQEIEVNMITNASSN 349
Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
EKTS E + + +PL+IHYEEKS++ S IQ PK M V+IPGPFAYKDN VPWKYECQFIT
Sbjct: 350 EKTSNETTFMWKPLVIHYEEKSSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 409
Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
+ T DNLK+V KEDEVR+RKGK +E+ DDLNDLSKVF E T
Sbjct: 410 DNVVSATVGGITRSGRCYTLDNLKDVSKEDEVRRRKGKAIEMACEDDLNDLSKVFTEKNT 469
Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
LV ++TD+E V +EEA EFLKLIKQ+ +
Sbjct: 470 LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTSARISMLSLFMYSEPHRKVLLDI 529
Query: 323 ------------------------------------------------------------ 382
Sbjct: 530 LNRAHVGHDISVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 589
Query: 383 ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 400
YL+ STMVVRAFD ARREVI DI IP KIGPSTFN+
Sbjct: 590 LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIEDIDIPLKIGPSTFNI 649
BLAST of Lsi03G006880 vs. NCBI nr
Match:
KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])
HSP 1 Score: 435.6 bits (1119), Expect = 6.2e-118
Identity = 260/568 (45.77%), Postives = 319/568 (56.16%), Query Frame = 0
Query: 23 IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
+ +N P +G V+ +R K+KV + TSM+ LFQIL+ AGYLSPR +++
Sbjct: 476 VNQNPLPNHEGPSINAVD-TFIQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 535
Query: 83 IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
IG T + CLFHPE + HSIEDC EFK E QEI+V+MI+NA SN
Sbjct: 536 IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSN 595
Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
EKTS E + + +P +IHYEEK ++ S IQ PK M V+IPGPFAYKDN VPWKYECQFIT
Sbjct: 596 EKTSNETTFMWKPFVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 655
Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
+ TPDNLK+V KEDEVR+RKGK +E+ DDLNDLSKVF + T
Sbjct: 656 DNVVSATVGGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTKKNT 715
Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
LV ++TD+E V +EEA EFLKLIKQ+ +
Sbjct: 716 LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDI 775
Query: 323 ------------------------------------------------------------ 382
Sbjct: 776 LNRAHVGHDISVNALSEIVENIIATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 835
Query: 383 ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 436
YL+ STMVVRAFD ARREVIGDI IP KIGPSTFNV
Sbjct: 836 LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNV 895
BLAST of Lsi03G006880 vs. NCBI nr
Match:
KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 414.5 bits (1064), Expect = 1.5e-111
Identity = 253/559 (45.26%), Postives = 307/559 (54.92%), Query Frame = 0
Query: 23 IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
+ +N P +G V+ +R K+KV + TSM+ LFQIL+ AGYLSPR +++
Sbjct: 476 VNQNPLPNHEGPIINAVD-TFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 535
Query: 83 IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
IG T + CLFHPE + HSIEDC EFK E QEI+V+MI+NA SN
Sbjct: 536 IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSN 595
Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
EKTS E + + +PL+IHYEEK ++ S IQ PK M V+IPGPFAYKDN VPWKYECQFIT
Sbjct: 596 EKTSNETTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 655
Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
+ TPDNLK+V KEDEVR+RKGK +E+ DDLNDLSKVF E T
Sbjct: 656 DNVVFATVEGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNT 715
Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
LV ++TD+E V +EEA EFLKLIKQ+ +
Sbjct: 716 LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFTYSEPHRKVLLDI 775
Query: 323 ------------------------------------------------------------ 382
Sbjct: 776 LNRAHVGHDISVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 835
Query: 383 ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 436
YL+ STMVVRAFD ARREVIGDI IP KIGPSTFNV
Sbjct: 836 LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNV 895
BLAST of Lsi03G006880 vs. NCBI nr
Match:
KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 76.6 bits (187), Expect = 7.3e-10
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 0
Query: 490 PTNFKTTINLIPDSKGKVNGMCAGQHDSIGRKERVVYYLSKKFISYESKYSLLEKTCGAL 549
PT + I + +G + G GQHDS G+KE+ VYYLSKKF +YESKYSLLEKTC AL
Sbjct: 1492 PTPGRPLIFCLTVKEGSM-GCVLGQHDSTGKKEQAVYYLSKKFTNYESKYSLLEKTCCAL 1551
Query: 550 AWRAQR 556
AW QR
Sbjct: 1552 AWTTQR 1556
HSP 2 Score: 410.2 bits (1053), Expect = 2.8e-110
Identity = 244/520 (46.92%), Postives = 307/520 (59.04%), Query Frame = 0
Query: 23 IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
+ +N P KG +++ +K K++V +TTSM LFQIL+ GYLSPR +++
Sbjct: 137 VNQNLLPIHKGPVINAIDIFIEKH-KNRVSDVTTSMNTLFQILHVVGYLSPRFNNDDEEK 196
Query: 83 IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
IG T ++ CLFHPE + H IEDC EFK E QEI+V+MI++A SN
Sbjct: 197 IGCTNKEQCLFHPETNDHFIEDCCEFKNEVQKLMDAKILLVGQMSMQEIEVNMITDASSN 256
Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
+KTS E +SI +PL+IHYEEK ++ S IQ PK M ++IPGPFAYKDN VVP KYE QFI
Sbjct: 257 KKTSNETTSIWKPLVIHYEEKPSIMSYIQKPKAMTIEIPGPFAYKDNHVVPCKYEYQFIP 316
Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
+ T DNLK+V KEDEVR+RKGK +E+ DDLNDLSKVF E T
Sbjct: 317 DNVVSTTIGGITRRRRCYTLDNLKDVLKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEQTT 376
Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
LV+++TD E V +EEA EFLKLIKQ+ +
Sbjct: 377 LVQKETDREVVSKEEACEFLKLIKQSEYKVIEQLRRTPACISIISLPYEEILPEGIGHTK 436
Query: 323 ----------------------------------------YLKSSTMVVRAFDDARREVI 382
YL+ STMVVRAFD A REVI
Sbjct: 437 TLHISVKCKDHYVARVLVDNGSSLNIMSRSTLTKLPIDPSYLRPSTMVVRAFDSAHREVI 496
Query: 383 GDIKIPFKIGPSTFNVPFQVLDVNSSYSCLFGRPWIHSARSVSSSLHERMIRPLSMGRRT 432
DI IP KIGPSTFN+ FQV+D NSSYSCL G+PWIHS +V SLH+R ++ G +
Sbjct: 497 EDIDIPLKIGPSTFNISFQVIDANSSYSCLLGQPWIHSVEAVPFSLHQR-VKFSVEGGQA 556
BLAST of Lsi03G006880 vs. NCBI nr
Match:
KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])
HSP 1 Score: 396.4 bits (1017), Expect = 4.2e-106
Identity = 236/481 (49.06%), Postives = 295/481 (61.33%), Query Frame = 0
Query: 23 IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
+ +N P +G V+ +R K+KV + TSM+ LFQIL+ AGYLSPR +++
Sbjct: 1037 VNQNPLPNHEGPSINAVD-TFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREK 1096
Query: 83 IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
IG T + CL HPE + HSIEDC EFK E Q+I+V+MI+NA SN
Sbjct: 1097 IGCTNNEQCLLHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQKIEVNMITNASSN 1156
Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
EKTS E + + +PL+IHYEEK ++ S IQ PK M V+IP IT
Sbjct: 1157 EKTSNETTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIP----------------VGGIT 1216
Query: 203 KS----TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENATLVRRKTDNEFVF 262
+S TPDNLK+V KEDEVR+RKGK +E+ DDLNDLSKVF E TLV ++TD+E V
Sbjct: 1217 RSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNTLVEKETDHEVVS 1276
Query: 263 EEEA-----------------------------------------REFLKLIKQNLFYLK 322
+EEA R L + + YL+
Sbjct: 1277 KEEAYEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLR 1336
Query: 323 SSTMVVRAFDDARREVIGDIKIPFKIGPSTFNVPFQVLDVNSSYSCLFGRPWIHSARSVS 382
STMVVRAFD A REVIGDI IP KIGPSTFNV FQV+D+NS YSCL GRPWIHSA +V
Sbjct: 1337 PSTMVVRAFDSACREVIGDIDIPLKIGPSTFNVSFQVMDINSLYSCLLGRPWIHSAGAVP 1396
Query: 383 SSLHERMIRPLSMGRRTCLWG---------GALPYVEAAKEAFECSYRSFEVANATIFPT 436
SSLH+R+ + G + ++G LPYVEA +EA ECSYRSFE ANATIFPT
Sbjct: 1397 SSLHQRLKFSVE-GGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEFANATIFPT 1456
BLAST of Lsi03G006880 vs. NCBI nr
Match:
KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])
HSP 1 Score: 73.6 bits (179), Expect = 6.2e-09
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 0
Query: 461 DKCDVSSELLKMREQEEKKTIICKAPD-TCPTNFKTTINLIPDSKGKVNGMCAGQHDSIG 520
DK +L + Q+E K + P PT + I + +G + G GQ DS G
Sbjct: 1931 DKIKAIVDLRSPKTQKEIKDYLQSPPILVSPTPGRPLILYLTVKEGSM-GCVLGQRDSTG 1990
Query: 521 RKERVVYYLSKKFISYESKYSLLEKTCGALAWRAQR 556
+KE+ VYYLSKKF +YESKYSLLEKTC LAW QR
Sbjct: 1991 KKEQAVYYLSKKFTNYESKYSLLEKTCCVLAWTTQR 2025
HSP 2 Score: 385.2 bits (988), Expect = 9.6e-103
Identity = 235/532 (44.17%), Postives = 289/532 (54.32%), Query Frame = 0
Query: 23 IKENDDPKEKGGRSTQVELDSKKRCKDKVHHLTTSMRVLFQILYEAGYLSPRVDSNGGNG 82
+ +N P +G V+ +R K+KV + TSM+ LFQIL+ +GYLSPR +++
Sbjct: 230 VNQNPLPNHEGPSINAVD-TFMQRHKNKVSDVATSMKTLFQILHGSGYLSPRFNNDDRKK 289
Query: 83 IGYTVEKGCLFHPEVDGHSIEDCVEFKRETDS--------------QEIKVDMISNALSN 142
IG T + CLFHPE + HSIEDC EFK E QEI+V+MI+NA SN
Sbjct: 290 IGCTNNEQCLFHPETNDHSIEDCCEFKNEVQKLMNSKILLIGQMSMQEIEVNMITNASSN 349
Query: 143 EKTSKEESSIREPLIIHYEEKSNVTSCIQMPKTMIVKIPGPFAYKDNQVVPWKYECQFIT 202
EKTS E + + +PL+IHYEEKS++ S IQ PK M V+IPGPFAYKDN VPWKYECQFIT
Sbjct: 350 EKTSNETTFMWKPLVIHYEEKSSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFIT 409
Query: 203 KS----------------TPDNLKNVPKEDEVRQRKGKVMEITSGDDLNDLSKVFAENAT 262
+ T DNLK+V KEDEVR+RKGK +E+ DDLNDLSKVF E T
Sbjct: 410 DNVVSATVGGITRSGRCYTLDNLKDVSKEDEVRRRKGKAIEMACEDDLNDLSKVFTEKNT 469
Query: 263 LVRRKTDNEFVFEEEAREFLKLIKQNLF-------------------------------- 322
LV ++TD+E V +EEA EFLKLIKQ+ +
Sbjct: 470 LVEKETDHEVVSKEEACEFLKLIKQSEYKVIEQLHRTSARISMLSLFMYSEPHRKVLLDI 529
Query: 323 ------------------------------------------------------------ 382
Sbjct: 530 LNRAHVGHDISVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARV 589
Query: 383 ------------------------YLKSSTMVVRAFDDARREVIGDIKIPFKIGPSTFNV 400
YL+ STMVVRAFD ARREVI DI IP KIGPSTFN+
Sbjct: 590 LVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIEDIDIPLKIGPSTFNI 649
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V681 | 3.0e-118 | 45.77 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7VAU5 | 7.2e-112 | 45.26 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7VAU5 | 3.5e-10 | 59.09 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7SUT0 | 2.0e-106 | 49.06 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84... | [more] |
A0A5A7SUT0 | 3.0e-09 | 45.83 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84... | [more] |
Match Name | E-value | Identity | Description | |
KAA0061241.1 | 6.2e-118 | 45.77 | uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa] | [more] |
KAA0065293.1 | 1.5e-111 | 45.26 | uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa] | [more] |
KAA0065293.1 | 7.3e-10 | 59.09 | uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa] | [more] |
KAA0033221.1 | 4.2e-106 | 49.06 | uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa] | [more] |
KAA0033221.1 | 6.2e-09 | 45.83 | uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |