Lsi03G003490 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G003490
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein YIP
Location	chr03: 4153438 .. 4158113 (+)
RNA-Seq Expression	Lsi03G003490
Synteny	Lsi03G003490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGGCACGTGGGTCATGCATGATGTCCTCCAGTGTGTAAACTCAGCTTCAACGTCGTCACTGTCCTCCGTGACCGTGTCTCCGTTAGCTGTCCCTTCCATGCGAAGAAAATGATCAACATTAGGGCTCAAACCCAGAGGATTCCATCTCAGTCAATCTCTCATCGATTCGTACCTTCGATGAATTTCTGAGCTCAGCTGACAGTTTCACTTTTCCTCTTCCTTTCGGTGTTTCGCCCTTTTCTCCTTTTGGTGCTTGATTGTTTTCTCCATGGATGAAACCTACACAAATCTTCCTACTAGCCATTTGCTTGGCTCAGTCCCTGTACGCTTTTTTTTTCAGACGCCCTTGCTTGCTTCTTTTATTTTATCTACTTTTTAAGTTGACCTCTGATTGATGCTATTTGTGTTTGGAATTTGGAATATCGGCGTCATTCTTCGCGATGATTGATCTGCTTTATAATGTCATCGGTTGCGATTTCGTCATTACATTTTTTTGTGTTTATTTTCTTTTTAAAGATGATTAATAAGGTGGAAATTGCTTTGTTGGTGGCTTCTTGCGTGTATGTTATGGTGTTTTTGAAATTTTGAGAATTCATCGTAATAAAAGGACAAGGGAGTACTATTCTTTTGAAGCCACCGAGATATTTCTTTGCTAATTAGTGTGGAGTTTAAATCAGGAAATTATTGCTGATTTTGAGATTTTCTTTTTCTTCTCTTCTTGATTTTTTCTTTGGTGGCACCTATAAAACAAACATCCGTGAATGATTGATGAATATGAGAGCAGTATCTGTGCTCTTTAACAGGGAAATAAGTTTGATACTTCCAGTTGGTCTTCTGAATATTGCTTTTGCAATATATTGGCAGTTGGCGTGTTTGTTTGTAGTTGTTTTTGGCTTTTGAGAGGCCAGGTTCCGACCCCATCTAGTTTTGCTGGGCTGAATTTCTGGAGAGCTTGAAATATAAAGGGCTGGCTAGTTTTTTTTCCCTCCTTGAGAAGGTTAAAAATGCATTTTGGTGGGAAGGGAGATTCAATGTTATTATATCATTGAGGGGATCTGGTATTTTAGCACGTATGTATTGAATCTCATCCTTAGGCCTTATTATGCTTTATAACCAACGATAGTACTGTAATACAAAAATGCAAGTTTTAACTGCTGTTTTTTTTTTTTTTTTTTTTTTATTTTATATTTTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATTTTATATTTTATATTTATTTATTTCTTGGTTGCACCTTGAATCCTTGTGTGTTTAAATGTTATTGTGTTCTGGTAACTTTAGTTTTAAAATTTATGGCCTTCTTTAATCCTCTCTTCGTTTTCCAAGCTCCTTTGTCTCCATATTTTTATATTATCCTTTTTTTGGTGGATCAATAGGCTGTAATCAATGAAGAGATTGAGAAAAGTGGCACAGACCATGAAAGTAAGAACAAATTTCAGTATCTTCTTCTTAGTAGTCTTATTTCATTTTGTATTCAATAATTAGTCGCACCTAAAAAATTATTCTAATTTTACTATTTAATTTCACATAAACTCATCTCTAAGGAATGACCTCTTAATTATATGCAGCACCAGAAGCAAGTATGCAGACATTCCCCCCAACTAATGGAGGAGACAGAGGGAGAGGTTATCAAACTCTTGAAAGTCCAAGTGGTATGCCGATCATCTACTCCCACTAGGCTATAGTCTATAGAATAGTCTGTTATGATAGTAGTGCAATTGGTGAAAATGAGATTATTCGTTTAATTTTCTTTTGCTTTTCTCAACTAGGGGTTATTACTTTACTTTTATAGATCTTTTAACAATTTAATATTCAATTTTCCCGTGTTCATGTGGTTTTTTTTATAATATATAAATAAGTTTTTTTTAATCTAATTATTTCATTTCTTCTAATAGCTAGTTTTGGACATACTAAAAACAAACCATGAACTTATATGGGATTGAGATGTGTTTGTTTCAAGTTCAACTAATTAAGCATTGCCTTTGTGTCTGAGATTCTCCTTTGTTGCAACCATCATAAGTAGGCTTGTGGCCAATATGGGCAATAGGTATAATAAAGGACTTAGAGAGAATGAGTTCAATCCACGGTGGCCATCTGCTTAGGATTTAATATCCTACAAATTTTCTTGGCACCGAAATATTATAGGGTCGTTTGAGTTGTCCTGTGAGATTAGTTGAGGTGCACGTAGCGGACACAAACACTCTTTTGGAAGTCAAAAGAAAAAAAAAAAGGGATTTTCCTTTCTTGGTATCTTTTGACTATGAAGGTTGAAAATGTTGTGTATCATGGCTACCAGATGTCTTTACACTTATTTAGTATTGTGGTACAAGGCTCTTGAATCTAACCCAAGCAGTCTGTAGAATCCTTGGATATGGAAGGTTGAAGCAACCTTTCTAGTTTCAAAGCCCTAGACACAGAAAAGATTGCAGGTTTTTGGATATTAGAAAGTAGAACCTGTTACAAAAAACAGACTGCCACATTATAAGGCTCCTGAAGATCCGATTTCTGTCAAGCATGCATTTTCATATGTCGTTGATTCTTTTCTAATGGTGAACCATACAATTGACTCCATTTAATTATGGCAGATTCTCAGCAGCAACCATCAAATAACTGGAAGGGGGTGTTTAGTGTATCATCTTACACTCAATATTTCAATGTGGATACCGACATTGTCATGAATAGATTGATTAGTTCCTTGTATCCAATTGGTGGAGACTTTTCTAGCAAGATCGATGCAAATCCTGATCTGTGAGTTTTTTTGTTTCCTCTCTTAACCTTAATAATTTTAATCTCTGATGGCATTGGGATTATCTGTGAGCTTTTCAATGCCTACCTTTTGGTGTCTTTTTTCTTTTCTAAATTTATGTGCCTCCCTGCCTGATCATTCAAGAATTCATATGGATGTTGTTCTTGTTTTTGAAACTAATGGATTATCAAACTCCTTTTGTTGGATTTTGCTACGACTTAGATATGGGCTCGTGTGGATCACCACTACATTGGTATTTGTCCTTGCGGCACTTGGAAACTGTGCGACCTTCCTCATGCAAAAGCGAAGTGATCACGGTGCTGCATGGAGTTTTGATGTCAGCTATATGAATGTGGCTGCCGGGTCTGTTTATGGCTATGCGATTGTGGTGCCCATGGCATTTTACTTTTCACTTCAGTACATGGGGTCAAACTCTAGCCTCATAAGATTTTGGTGCTTGTGGGGATACTCTCTGTTCATTTTTATTCTGGCATCTGTAAGCTTCTGGAATCTCTACTGCAATTTTGTTCTCTTCTTTTATCCATTAGACATAATTCCATACATGACTTTGCCGAATTTGACCTTTTTTTTAATATCTTTGCCATTTCCTTGTTTTGGTACTTCAGTTTCTTTTTTACTTCATATATTTTGAATTTCTGGCTTTCGTAGCTTAGTGGATATTGCAATGAGCATATAAATAAAGAAATGACTACAAAAGAATACTCTGTTCCCCAGACAAGATGTTTTCAATTTTCATTTTCAGAGGACCTGCATGACTTTTTACCAGCAAAGATCCATTTTGATGGGCAATATAACTGCATGATTTTTACATCTCTTTTTCTTTTCTAGTTTCTGTTGCTCATCCCGGTTGAAATTCTGCGATGGTTCATTATACTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTAGCTTTGAACCTGAGGTCCTATATTGAGGGAAATGATCTTTCGGTTCTGATAGTTGCTGCATTTTTCTTGCAAATGGCTTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGAGCAAGCTCACTCCATTTTCTGCTGTCATCGGACCATATCTTAGTTTTGTTTCTGAGTGCTGACCTCTTAACTAAAGAATGGTTTCCCCTTGGTTGGTGTTGGAAGCTCTCGGTCCCTGTAACTTGTGTGATGAATCACGAAGGATCAACAGAAAAGAACATGGACAGTCAATAGTTTTTATGATTGGAAGTGATCATTTTATCATAACAACAATCTCTAACTAGCCCATGGTATTGTTTGCAAAGCTCTCAGATGGCCTTCCCCTCTTTATGAATATCGTTTGAGGAGAGTGAAATCTGTTTATTTCTCGTTTGATTATAAATTTTCATCGTAGTATTCCACTCAAACACGGATGTCACTGTAAATAGATGTTAAAGAATGTACTTTGATCATTGATATGATGTGATTGAATTTGAATACAACTCGAAAAAGCATGCCTCTTTCTTAA

mRNA sequence

AGAAGGCACGTGGGTCATGCATGATGTCCTCCAGTGTGTAAACTCAGCTTCAACGTCGTCACTGTCCTCCGTGACCGTGTCTCCGTTAGCTGTCCCTTCCATGCGAAGAAAATGATCAACATTAGGGCTCAAACCCAGAGGATTCCATCTCAGTCAATCTCTCATCGATTCGTACCTTCGATGAATTTCTGAGCTCAGCTGACAGTTTCACTTTTCCTCTTCCTTTCGGTGTTTCGCCCTTTTCTCCTTTTGGTGCTTGATTGTTTTCTCCATGGATGAAACCTACACAAATCTTCCTACTAGCCATTTGCTTGGCTCAGTCCCTGCTGTAATCAATGAAGAGATTGAGAAAAGTGGCACAGACCATGAAACACCAGAAGCAAGTATGCAGACATTCCCCCCAACTAATGGAGGAGACAGAGGGAGAGGTTATCAAACTCTTGAAAGTCCAAGTGATTCTCAGCAGCAACCATCAAATAACTGGAAGGGGGTGTTTAGTGTATCATCTTACACTCAATATTTCAATGTGGATACCGACATTGTCATGAATAGATTGATTAGTTCCTTGTATCCAATTGGTGGAGACTTTTCTAGCAAGATCGATGCAAATCCTGATCTGTGAGTTTTTTTGTTTCCTCTCTTAACCTTAATAATTTTAATCTCTGATGGCATTGGGATTATCTGTGAGCTTTTCAATGCCTACCTTTTGGTGTCTTTTTTCTTTTCTAAATTTATGTGCCTCCCTGCCTGATCATTCAAGAATTCATATGGATGTTGTTCTTGTTTTTGAAACTAATGGATTATCAAACTCCTTTTGTTGGATTTTGCTACGACTTAGATATGGGCTCGTGTGGATCACCACTACATTGGTATTTGTCCTTGCGGCACTTGGAAACTGTGCGACCTTCCTCATGCAAAAGCGAAGTGATCACGGTGCTGCATGGAGTTTTGATGTCAGCTATATGAATGTGGCTGCCGGGTCTGTTTATGGCTATGCGATTGTGGTGCCCATGGCATTTTACTTTTCACTTCAGTACATGGGGTCAAACTCTAGCCTCATAAGATTTTGGTGCTTGTGGGGATACTCTCTGTTCATTTTTATTCTGGCATCTTTTCTGTTGCTCATCCCGGTTGAAATTCTGCGATGGTTCATTATACTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTAGCTTTGAACCTGAGGTCCTATATTGAGGGAAATGATCTTTCGGTTCTGATAGTTGCTGCATTTTTCTTGCAAATGGCTTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGAGCAAGCTCACTCCATTTTCTGCTGTCATCGGACCATATCTTAGTTTTGTTTCTGAGTGCTGACCTCTTAACTAAAGAATGGTTTCCCCTTGGTTGGTGTTGGAAGCTCTCGGTCCCTGTAACTTGTGTGATGAATCACGAAGGATCAACAGAAAAGAACATGGACAGTCAATAGTTTTTATGATTGGAAGTGATCATTTTATCATAACAACAATCTCTAACTAGCCCATGGTATTGTTTGCAAAGCTCTCAGATGGCCTTCCCCTCTTTATGAATATCGTTTGAGGAGAGTGAAATCTGTTTATTTCTCGTTTGATTATAAATTTTCATCGTAGTATTCCACTCAAACACGGATGTCACTGTAAATAGATGTTAAAGAATGTACTTTGATCATTGATATGATGTGATTGAATTTGAATACAACTCGAAAAAGCATGCCTCTTTCTTAA

Coding sequence (CDS)

ATGGCATTGGGATTATCTGTGAGCTTTTCAATGCCTACCTTTTGGTGTCTTTTTTCTTTTCTAAATTTATGTGCCTCCCTGCCTGATCATTCAAGAATTCATATGGATGTTGTTCTTGTTTTTGAAACTAATGGATTATCAAACTCCTTTTGTTGGATTTTGCTACGACTTAGATATGGGCTCGTGTGGATCACCACTACATTGGTATTTGTCCTTGCGGCACTTGGAAACTGTGCGACCTTCCTCATGCAAAAGCGAAGTGATCACGGTGCTGCATGGAGTTTTGATGTCAGCTATATGAATGTGGCTGCCGGGTCTGTTTATGGCTATGCGATTGTGGTGCCCATGGCATTTTACTTTTCACTTCAGTACATGGGGTCAAACTCTAGCCTCATAAGATTTTGGTGCTTGTGGGGATACTCTCTGTTCATTTTTATTCTGGCATCTTTTCTGTTGCTCATCCCGGTTGAAATTCTGCGATGGTTCATTATACTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTAGCTTTGAACCTGAGGTCCTATATTGAGGGAAATGATCTTTCGGTTCTGATAGTTGCTGCATTTTTCTTGCAAATGGCTTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGA

Protein sequence

MALGLSVSFSMPTFWCLFSFLNLCASLPDHSRIHMDVVLVFETNGLSNSFCWILLRLRYGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALNLRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP

Homology

[Close]

BLAST of Lsi03G003490 vs. ExPASy Swiss-Prot
Match: Q54TS4 (Protein YIPF1 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf1 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.3e-13
Identity = 49/156 (31.41%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YG  W+ T+LVF++A   N   +     SDH  +W  D+  +  +A ++YGY+ V+P+  
Sbjct: 168 YGPFWVLTSLVFIVAVTSNLNEYF--HSSDH-KSWEVDIQKIVYSAITIYGYSFVIPLIL 227

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           +   ++M     L+   C++GY+LFIF+ AS L +IP+++++W I+ ++   S  F+  N
Sbjct: 228 WGIFKWMNLGLRLLDMLCIYGYTLFIFVPASILCVIPLQLVQWIIVAIASIVSGLFLVTN 287

Query: 179 LRSYI-EGNDLSVLIVAAFF--LQMALAIFIKVWFF 212
           + + + E      LI+ A    L + LA+ +K++FF
Sbjct: 288 IFTPLKEDFTKRGLIICAVIGALHIGLALVLKLYFF 320

[Close]

BLAST of Lsi03G003490 vs. ExPASy Swiss-Prot
Match: Q9Y548 (Protein YIPF1 OS=Homo sapiens OX=9606 GN=YIPF1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 49/164 (29.88%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQ--KRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPM 118
           YG  WI  TLVF +A  GN + FL+   +++ H   +  +   +++AA  +Y YA +VP+
Sbjct: 121 YGPFWICATLVFAIAISGNLSNFLIHLGEKTYH---YVPEFRKVSIAATIIYAYAWLVPL 180

Query: 119 AFYFSLQYMGS------NSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAA 178
           A +  L +  S      + S +   C++GYSLFI+I  + L +IP + +RW +++++   
Sbjct: 181 ALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGI 240

Query: 179 SASFVALNLRSYIEGNDLSV---LIVAAFFLQMALAIFIKVWFF 212
           S S +A+     +  ++  V    IV    L M L++    +FF
Sbjct: 241 SGSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFF 281

[Close]

BLAST of Lsi03G003490 vs. ExPASy Swiss-Prot
Match: Q5RBL0 (Protein YIPF1 OS=Pongo abelii OX=9601 GN=YIPF1 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 48/162 (29.63%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YG  WI  TLVF +A  GN + FL+    +    +  +   +++AA ++Y YA +VP+A 
Sbjct: 121 YGPFWICATLVFAIAISGNLSNFLIH-LGEKTYRYVPEFRKVSIAATTIYAYAWLVPLAL 180

Query: 119 YFSLQYMGS------NSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASA 178
           +  L +  S      + S +   C++GYSLFI+I  + L +IP + +RW +++++   S 
Sbjct: 181 WGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISG 240

Query: 179 SFVALNLRSYIEGNDLSV---LIVAAFFLQMALAIFIKVWFF 212
           S +A+     +  ++  V    IV    L M L++    +FF
Sbjct: 241 SVLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFF 281

[Close]

BLAST of Lsi03G003490 vs. ExPASy Swiss-Prot
Match: Q6P6G5 (Protein YIPF1 OS=Rattus norvegicus OX=10116 GN=Yipf1 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.9e-08
Identity = 48/164 (29.27%), Postives = 86/164 (52.44%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQ--KRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPM 118
           YG  WI  TLVF +A  GN + FL+   +++ H   +  +   +++AA  +Y YA +VP+
Sbjct: 121 YGPFWICATLVFAIAISGNLSNFLIHLGEKTYH---YVPEFQKVSIAATVIYAYAWLVPL 180

Query: 119 AFYFSLQYMGS------NSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAA 178
           A +  L +  S      + S +   C++GYSLFI+I  + L +IP  ++RW ++ ++   
Sbjct: 181 ALWGFLLWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAVLWIIPQRVIRWVLVTIALGI 240

Query: 179 SASFVALNLRSYIEGNDLSV---LIVAAFFLQMALAIFIKVWFF 212
           S S +A+     +  ++  V    IV    L + L++    +FF
Sbjct: 241 SGSVLAMTFWPAVREDNRRVALATIVTIMLLHVLLSVGCLAYFF 281

[Close]

BLAST of Lsi03G003490 vs. ExPASy Swiss-Prot
Match: Q91VU1 (Protein YIPF1 OS=Mus musculus OX=10090 GN=Yipf1 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 47/164 (28.66%), Postives = 86/164 (52.44%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQ--KRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPM 118
           YG  WI  TLVF +A  GN + FL+   +++ H   +  +   +++AA  +Y YA +VP+
Sbjct: 121 YGPFWICATLVFAIAISGNLSNFLIHLGEKTYH---YVPEFQKVSIAATVIYAYAWLVPL 180

Query: 119 AFYFSLQYMGS------NSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAA 178
           A +  L +  S      + S +   C++GYSLFI+I  + L +IP  ++RW +++++   
Sbjct: 181 ALWGFLLWRNSKVMSMVSYSFLEIVCVYGYSLFIYIPTAVLWIIPQRVVRWVLVMIALGV 240

Query: 179 SASFVALNLRSYIEGNDLSV---LIVAAFFLQMALAIFIKVWFF 212
           S S + +     +  ++  V    IV    L + L++    +FF
Sbjct: 241 SGSVLVMTFWPAVREDNRRVALATIVTIVLLHVLLSVGCLAYFF 281

[Close]

BLAST of Lsi03G003490 vs. ExPASy TrEMBL
Match: A0A0A0K8E4 (Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_6G008790 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 9.5e-73
Identity = 147/154 (95.45%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWITTTLVFVLAALGNCAT+LMQKRSD GAAWSFDVSYMNVAAGSVYGYAIVVPMAF
Sbjct: 117 YGLVWITTTLVFVLAALGNCATYLMQKRSDQGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 176

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YFSLQY+GSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFV+LN
Sbjct: 177 YFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVSLN 236

Query: 179 LRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LR+YI+GNDLSVLI+AAFFLQMALAIFIKVWFFP
Sbjct: 237 LRAYIDGNDLSVLIIAAFFLQMALAIFIKVWFFP 270

[Close]

BLAST of Lsi03G003490 vs. ExPASy TrEMBL
Match: A0A6J1H983 (Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111461208 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.7e-72
Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWITTTLVFVLAALGNCATFLMQKRSDHG AWSFDVSY+NVAAGSVYGYAI+VPMAF
Sbjct: 79  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGTAWSFDVSYVNVAAGSVYGYAILVPMAF 138

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YFSLQY+GSNSSLIRFWCLWGYSLFIFILASFLLLIPVE LRWFIILLSGAASASFV LN
Sbjct: 139 YFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEFLRWFIILLSGAASASFVTLN 198

Query: 179 LRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LRSYIEGN+LSV++VAAFFLQMALAIFIKVWFFP
Sbjct: 199 LRSYIEGNNLSVMVVAAFFLQMALAIFIKVWFFP 232

[Close]

BLAST of Lsi03G003490 vs. ExPASy TrEMBL
Match: A0A6J1H7J3 (Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111461208 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.7e-72
Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWITTTLVFVLAALGNCATFLMQKRSDHG AWSFDVSY+NVAAGSVYGYAI+VPMAF
Sbjct: 115 YGLVWITTTLVFVLAALGNCATFLMQKRSDHGTAWSFDVSYVNVAAGSVYGYAILVPMAF 174

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YFSLQY+GSNSSLIRFWCLWGYSLFIFILASFLLLIPVE LRWFIILLSGAASASFV LN
Sbjct: 175 YFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEFLRWFIILLSGAASASFVTLN 234

Query: 179 LRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LRSYIEGN+LSV++VAAFFLQMALAIFIKVWFFP
Sbjct: 235 LRSYIEGNNLSVMVVAAFFLQMALAIFIKVWFFP 268

[Close]

BLAST of Lsi03G003490 vs. ExPASy TrEMBL
Match: A0A1S4DTR4 (Protein YIP OS=Cucumis melo OX=3656 GN=LOC103485530 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.4e-71
Identity = 147/154 (95.45%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWITTTLVFVLAALGNCATFLMQKRS  GAAWSFDVSYMNVAAGSVYGYAIVVPMAF
Sbjct: 79  YGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 138

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YFSLQY+GSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFV+LN
Sbjct: 139 YFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVSLN 198

Query: 179 LRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LRSYI+ NDLSVLI+AAFFLQMALAIFIKVWFFP
Sbjct: 199 LRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 232

[Close]

BLAST of Lsi03G003490 vs. ExPASy TrEMBL
Match: A0A1S3B3D6 (Protein YIP OS=Cucumis melo OX=3656 GN=LOC103485530 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.4e-71
Identity = 147/154 (95.45%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWITTTLVFVLAALGNCATFLMQKRS  GAAWSFDVSYMNVAAGSVYGYAIVVPMAF
Sbjct: 117 YGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 176

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YFSLQY+GSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFV+LN
Sbjct: 177 YFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVSLN 236

Query: 179 LRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LRSYI+ NDLSVLI+AAFFLQMALAIFIKVWFFP
Sbjct: 237 LRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 270

[Close]

BLAST of Lsi03G003490 vs. NCBI nr
Match: XP_004138449.1 (protein YIPF1 homolog [Cucumis sativus] >KGN45748.1 hypothetical protein Csa_005560 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 2.0e-72
Identity = 147/154 (95.45%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWITTTLVFVLAALGNCAT+LMQKRSD GAAWSFDVSYMNVAAGSVYGYAIVVPMAF
Sbjct: 117 YGLVWITTTLVFVLAALGNCATYLMQKRSDQGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 176

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YFSLQY+GSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFV+LN
Sbjct: 177 YFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVSLN 236

Query: 179 LRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LR+YI+GNDLSVLI+AAFFLQMALAIFIKVWFFP
Sbjct: 237 LRAYIDGNDLSVLIIAAFFLQMALAIFIKVWFFP 270

[Close]

BLAST of Lsi03G003490 vs. NCBI nr
Match: KAG7033330.1 (Protein YIPF1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.0 bits (720), Expect = 4.4e-72
Identity = 146/154 (94.81%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWITTTLVFVLAALGNCATFLMQKRSDHG AWSFDVSY+NVAAGSVYGYAIVVPMAF
Sbjct: 115 YGLVWITTTLVFVLAALGNCATFLMQKRSDHGTAWSFDVSYVNVAAGSVYGYAIVVPMAF 174

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YFSLQY+GSNSSLIRFWCLWGYSLFIFILASFLLLIPVE LRWFIILLSGAASASFV LN
Sbjct: 175 YFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEFLRWFIILLSGAASASFVTLN 234

Query: 179 LRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LRSYIEGN+LSV++VAAFFLQMALAIFIKVWFFP
Sbjct: 235 LRSYIEGNNLSVMVVAAFFLQMALAIFIKVWFFP 268

[Close]

BLAST of Lsi03G003490 vs. NCBI nr
Match: XP_023537048.1 (protein YIPF1 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.8 bits (717), Expect = 9.8e-72
Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWITTTLVFVLAALGNCATFLMQKRSDHG AWSFDVSY+NVAAGSVYGYAI+VPMAF
Sbjct: 115 YGLVWITTTLVFVLAALGNCATFLMQKRSDHGTAWSFDVSYVNVAAGSVYGYAILVPMAF 174

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YFSLQY+GSNSSLIRFWCLWGYSLFIFILASFLLLIPVE LRWFIILLSGAASASFV LN
Sbjct: 175 YFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEFLRWFIILLSGAASASFVTLN 234

Query: 179 LRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LRSYIEGN+LSV++VAAFFLQMALAIFIKVWFFP
Sbjct: 235 LRSYIEGNNLSVMVVAAFFLQMALAIFIKVWFFP 268

[Close]

BLAST of Lsi03G003490 vs. NCBI nr
Match: XP_023537056.1 (protein YIPF1 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.8 bits (717), Expect = 9.8e-72
Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWITTTLVFVLAALGNCATFLMQKRSDHG AWSFDVSY+NVAAGSVYGYAI+VPMAF
Sbjct: 79  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGTAWSFDVSYVNVAAGSVYGYAILVPMAF 138

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YFSLQY+GSNSSLIRFWCLWGYSLFIFILASFLLLIPVE LRWFIILLSGAASASFV LN
Sbjct: 139 YFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEFLRWFIILLSGAASASFVTLN 198

Query: 179 LRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LRSYIEGN+LSV++VAAFFLQMALAIFIKVWFFP
Sbjct: 199 LRSYIEGNNLSVMVVAAFFLQMALAIFIKVWFFP 232

[Close]

BLAST of Lsi03G003490 vs. NCBI nr
Match: XP_022960495.1 (protein YIPF1 homolog isoform X2 [Cucurbita moschata])

HSP 1 Score: 280.8 bits (717), Expect = 9.8e-72
Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWITTTLVFVLAALGNCATFLMQKRSDHG AWSFDVSY+NVAAGSVYGYAI+VPMAF
Sbjct: 79  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGTAWSFDVSYVNVAAGSVYGYAILVPMAF 138

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YFSLQY+GSNSSLIRFWCLWGYSLFIFILASFLLLIPVE LRWFIILLSGAASASFV LN
Sbjct: 139 YFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEFLRWFIILLSGAASASFVTLN 198

Query: 179 LRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LRSYIEGN+LSV++VAAFFLQMALAIFIKVWFFP
Sbjct: 199 LRSYIEGNNLSVMVVAAFFLQMALAIFIKVWFFP 232

[Close]

BLAST of Lsi03G003490 vs. TAIR 10
Match: AT2G39805.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 215.7 bits (548), Expect = 3.6e-56
Identity = 109/155 (70.32%), Postives = 133/155 (85.81%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWI TTLVFVLA+LGNCAT+L++KR+D  A W FDV+YMN+AA  +YGYAI+VP+ F
Sbjct: 121 YGLVWICTTLVFVLASLGNCATYLVKKRTDSNAPWIFDVNYMNLAASIIYGYAIIVPLGF 180

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YF+L+YMGS + L+RFWCLWGYSLFIF+  S  LLIPVE LRW IILL+G+AS+ FVALN
Sbjct: 181 YFALRYMGSKADLLRFWCLWGYSLFIFVPTSLPLLIPVEFLRWVIILLAGSASSCFVALN 240

Query: 179 LRSYIE-GNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LRSY+E  ND++V++ AAF LQM L+IFIKVWFFP
Sbjct: 241 LRSYLETNNDITVVMAAAFGLQMVLSIFIKVWFFP 275

[Close]

BLAST of Lsi03G003490 vs. TAIR 10
Match: AT2G39805.2 (Integral membrane Yip1 family protein )

HSP 1 Score: 215.7 bits (548), Expect = 3.6e-56
Identity = 109/155 (70.32%), Postives = 133/155 (85.81%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YGLVWI TTLVFVLA+LGNCAT+L++KR+D  A W FDV+YMN+AA  +YGYAI+VP+ F
Sbjct: 122 YGLVWICTTLVFVLASLGNCATYLVKKRTDSNAPWIFDVNYMNLAASIIYGYAIIVPLGF 181

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           YF+L+YMGS + L+RFWCLWGYSLFIF+  S  LLIPVE LRW IILL+G+AS+ FVALN
Sbjct: 182 YFALRYMGSKADLLRFWCLWGYSLFIFVPTSLPLLIPVEFLRWVIILLAGSASSCFVALN 241

Query: 179 LRSYIE-GNDLSVLIVAAFFLQMALAIFIKVWFFP 213
           LRSY+E  ND++V++ AAF LQM L+IFIKVWFFP
Sbjct: 242 LRSYLETNNDITVVMAAAFGLQMVLSIFIKVWFFP 276

[Close]

BLAST of Lsi03G003490 vs. TAIR 10
Match: AT3G05280.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 119.4 bits (298), Expect = 3.5e-27
Identity = 68/155 (43.87%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YG  WI TTL+FV A++G   T++  K       W++D++ +  +AG  YGY  +VP+A 
Sbjct: 125 YGPFWICTTLIFVAASIGTFVTYIAHKWKKQ--EWNYDINLVTWSAGVFYGYVTIVPLAL 184

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           Y  L+Y  + S L++ +CL+GYSLF+FI A  L ++PVEI RW I  ++G  SA+FVALN
Sbjct: 185 YVVLKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPVEIFRWVIAGVAGFMSATFVALN 244

Query: 179 LRSYI-EGNDLSVLIVAA-FFLQMALAIFIKVWFF 212
           L+++I    + S+LI+A+ F LQ+ALA+ +K++ F
Sbjct: 245 LKAHINSAGERSILIIASIFLLQLALAVVLKLYIF 277

[Close]

BLAST of Lsi03G003490 vs. TAIR 10
Match: AT5G27490.1 (Integral membrane Yip1 family protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-26
Identity = 65/155 (41.94%), Postives = 103/155 (66.45%), Query Frame = 0


Query: 59  YGLVWITTTLVFVLAALGNCATFLMQKRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAF 118
           YG  WI TTL+FV A++G   T++  K       W++D++ +  +AG  YGY  +VP+A 
Sbjct: 126 YGPFWICTTLIFVAASIGTFVTYIAHKLKKQ--EWNYDINLVTWSAGVFYGYVTIVPLAL 185

Query: 119 YFSLQYMGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALN 178
           Y  L+Y  + S L++ +CL+GYSLF+FI A  L ++P+EI RW I  L+G  SA+FVALN
Sbjct: 186 YVVLKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGLAGFMSATFVALN 245

Query: 179 LRSYIE--GNDLSVLIVAAFFLQMALAIFIKVWFF 212
           L+++I   G    +++V+ F LQ+AL++ +K++ F
Sbjct: 246 LKAHINSAGERWFLIVVSIFLLQLALSVVLKLYLF 278

The following BLAST results are available for this feature:

BLAST of Lsi03G003490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54TS4	6.3e-13	31.41	Protein YIPF1 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf1 PE=3 SV=1	[more]
Q9Y548	1.6e-08	29.88	Protein YIPF1 OS=Homo sapiens OX=9606 GN=YIPF1 PE=1 SV=1	[more]
Q5RBL0	1.6e-08	29.63	Protein YIPF1 OS=Pongo abelii OX=9601 GN=YIPF1 PE=2 SV=1	[more]
Q6P6G5	7.9e-08	29.27	Protein YIPF1 OS=Rattus norvegicus OX=10116 GN=Yipf1 PE=2 SV=1	[more]
Q91VU1	1.4e-07	28.66	Protein YIPF1 OS=Mus musculus OX=10090 GN=Yipf1 PE=2 SV=1	[more]

BLAST of Lsi03G003490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8E4	9.5e-73	95.45	Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_6G008790 PE=3 SV=1	[more]
A0A6J1H983	4.7e-72	94.16	Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111461208 PE=3 SV=1	[more]
A0A6J1H7J3	4.7e-72	94.16	Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111461208 PE=3 SV=1	[more]
A0A1S4DTR4	1.4e-71	95.45	Protein YIP OS=Cucumis melo OX=3656 GN=LOC103485530 PE=3 SV=1	[more]
A0A1S3B3D6	1.4e-71	95.45	Protein YIP OS=Cucumis melo OX=3656 GN=LOC103485530 PE=3 SV=1	[more]

BLAST of Lsi03G003490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138449.1	2.0e-72	95.45	protein YIPF1 homolog [Cucumis sativus] >KGN45748.1 hypothetical protein Csa_005...	[more]
KAG7033330.1	4.4e-72	94.81	Protein YIPF1-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023537048.1	9.8e-72	94.16	protein YIPF1 homolog isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023537056.1	9.8e-72	94.16	protein YIPF1 homolog isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022960495.1	9.8e-72	94.16	protein YIPF1 homolog isoform X2 [Cucurbita moschata]	[more]

BLAST of Lsi03G003490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39805.1	3.6e-56	70.32	Integral membrane Yip1 family protein	[more]
AT2G39805.2	3.6e-56	70.32	Integral membrane Yip1 family protein	[more]
AT3G05280.1	3.5e-27	43.87	Integral membrane Yip1 family protein	[more]
AT5G27490.1	1.0e-26	41.94	Integral membrane Yip1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006977	Yip1 domain	PFAM	PF04893	Yip1	coord: 59..205 e-value: 8.9E-7 score: 29.0
IPR039765	Protein Yip5/YIPF1/YIPF2	PANTHER	PTHR12822	UNCHARACTERIZED	coord: 59..212
None	No IPR available	PANTHER	PTHR12822:SF5	PROTEIN YIPF	coord: 59..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G003490.1	Lsi03G003490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0031267	small GTPase binding