Lsi02G022150 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G022150
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ethylene-responsive transcription factor 1B-like
Location	chr02: 28581082 .. 28581774 (-)
RNA-Seq Expression	Lsi02G022150
Synteny	Lsi02G022150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATTGTTACTGATTTGTTTGGTAATAATTACCAAGAAAATTTCTTGTGGAACAATAATCACAACCAGAGTTTCATTTCCGGGGAAGACAATTCTCACCAACTCTCATTTGATCACTTCAAGTACTTGAAACAGATATTGTTTGATGATATGTTTGTGGACACGGTGGAAGGAACGACGTCGTCGGATTCGAGTTCTTGCTCATCTCCGGTGGTGATGCAAGTTAAGGAGGAGATGGAGGAAGGGAGTTTTAGCGACGGCGTCGTTGTGCAGGAAGATCATAAGGAGGAGAGAGTTTATCGAGGGGTGCGGAGGAGGCCGTGGGGGAAATACGCAGCCGAGATTAGGGATTCGACGCGACAAGGGGTGAGAGTGTGGTTGGGGACGTTTGATAGTGCCGAGGCGGCTGCGTTGGCATATGACCAAGCTGCATTTTGCATGAGAGGAGGGCTAGCCACACTTAACTTTCCGGTCGAGGTTGTTAGAGAATCGCTTCGAGAGATGAAGTACCGGTGGGAGGCTGGGTGCTCGCCGGTCTTGGCGCTTAAGCGGCGGCACTCGATACGGAGGAAGAAGATGGCTGAGGTGGAGAAGATGGAGAAGAAGATGAAGAAGAAGAAGCAAAGTGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA

mRNA sequence

ATGTCAATTGTTACTGATTTGTTTGGTAATAATTACCAAGAAAATTTCTTGTGGAACAATAATCACAACCAGAGTTTCATTTCCGGGGAAGACAATTCTCACCAACTCTCATTTGATCACTTCAAGTACTTGAAACAGATATTGTTTGATGATATGTTTGTGGACACGGTGGAAGGAACGACGTCGTCGGATTCGAGTTCTTGCTCATCTCCGGTGGTGATGCAAGTTAAGGAGGAGATGGAGGAAGGGAGTTTTAGCGACGGCGTCGTTGTGCAGGAAGATCATAAGGAGGAGAGAGTTTATCGAGGGGTGCGGAGGAGGCCGTGGGGGAAATACGCAGCCGAGATTAGGGATTCGACGCGACAAGGGGTGAGAGTGTGGTTGGGGACGTTTGATAGTGCCGAGGCGGCTGCGTTGGCATATGACCAAGCTGCATTTTGCATGAGAGGAGGGCTAGCCACACTTAACTTTCCGGTCGAGGTTGTTAGAGAATCGCTTCGAGAGATGAAGTACCGGTGGGAGGCTGGGTGCTCGCCGGTCTTGGCGCTTAAGCGGCGGCACTCGATACGGAGGAAGAAGATGGCTGAGGTGGAGAAGATGGAGAAGAAGATGAAGAAGAAGAAGCAAAGTGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA

Coding sequence (CDS)

ATGTCAATTGTTACTGATTTGTTTGGTAATAATTACCAAGAAAATTTCTTGTGGAACAATAATCACAACCAGAGTTTCATTTCCGGGGAAGACAATTCTCACCAACTCTCATTTGATCACTTCAAGTACTTGAAACAGATATTGTTTGATGATATGTTTGTGGACACGGTGGAAGGAACGACGTCGTCGGATTCGAGTTCTTGCTCATCTCCGGTGGTGATGCAAGTTAAGGAGGAGATGGAGGAAGGGAGTTTTAGCGACGGCGTCGTTGTGCAGGAAGATCATAAGGAGGAGAGAGTTTATCGAGGGGTGCGGAGGAGGCCGTGGGGGAAATACGCAGCCGAGATTAGGGATTCGACGCGACAAGGGGTGAGAGTGTGGTTGGGGACGTTTGATAGTGCCGAGGCGGCTGCGTTGGCATATGACCAAGCTGCATTTTGCATGAGAGGAGGGCTAGCCACACTTAACTTTCCGGTCGAGGTTGTTAGAGAATCGCTTCGAGAGATGAAGTACCGGTGGGAGGCTGGGTGCTCGCCGGTCTTGGCGCTTAAGCGGCGGCACTCGATACGGAGGAAGAAGATGGCTGAGGTGGAGAAGATGGAGAAGAAGATGAAGAAGAAGAAGCAAAGTGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA

Protein sequence

MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGTTSSDSSSCSSPVVMQVKEEMEEGSFSDGVVVQEDHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGCSPVLALKRRHSIRRKKMAEVEKMEKKMKKKKQSVVVFEDLGVEYLEELLSLTS

Homology

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BLAST of Lsi02G022150 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.8e-42
Identity = 90/151 (59.60%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 76  VKEEMEEGSFSDGVVVQEDHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAE 135
           V      G   + V   E+ ++++ YRGVR+RPWGKYAAEIRDSTR GVRVWLGTFD+AE
Sbjct: 41  VNSSSSYGIKEEEVTSYEEERKDKNYRGVRKRPWGKYAAEIRDSTRNGVRVWLGTFDNAE 100

Query: 136 AAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGCSPVLALKRRHSIRRKKMA 195
            AALAYDQAAF MRG +A LNFPVE+V+ESL EMK R++  CSPV+ LK+R+S+RRK ++
Sbjct: 101 EAALAYDQAAFAMRGSMAILNFPVEIVKESLNEMKCRFDGNCSPVIELKKRYSMRRKSVS 160

Query: 196 EVEKMEKKMKKKKQSVVVFEDLGVEYLEELL 227
                  +  + ++ VVVFEDLG EYLEELL
Sbjct: 161 -------RKNRARKDVVVFEDLGAEYLEELL 184

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BLAST of Lsi02G022150 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-38
Identity = 98/192 (51.04%), Postives = 119/192 (61.98%), Query Frame = 0


Query: 56  TVEGTTSSDSSSCSSPVVMQVKEEMEEGSFSDGVVVQ-------------------EDHK 115
           ++  +  S SSS S+   +   E   E  F  G++ Q                      K
Sbjct: 18  SIGSSPDSFSSSSSNNYSLPFNENDSEEMFLYGLIEQSTQQTYIDSDSQDLPIKSVSSRK 77

Query: 116 EERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLN 175
            E+ YRGVRRRPWGK+AAEIRDSTR G+RVWLGTF+SAE AALAYDQAAF MRG  A LN
Sbjct: 78  SEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILN 137

Query: 176 FPVEVVRESLREMKYRWEAGCSPVLALKRRHSIRRKKMAEVEKME--KKMKKKKQSVVVF 227
           F  E V+ESL E+KY +E GCSPV+ALKR+HS+RR+   +  K         K  +VVVF
Sbjct: 138 FSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDHRSVKLDNVVVF 197

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BLAST of Lsi02G022150 vs. ExPASy Swiss-Prot
Match: Q8VYM0 (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.0e-37
Identity = 98/197 (49.75%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 62  SSDSSSCSSPVVMQVKEEMEEGSFSDGVVVQEDHK----EERVYRGVRRRPWGKYAAEIR 121
           S D  S  SP +M +KEE++ G  S+    +E+ K    EER YRGVR+RPWGK+AAEIR
Sbjct: 47  SDDFFSFESPEMM-IKEEIQNGDVSNS---EEEEKVGIDEERSYRGVRKRPWGKFAAEIR 106

Query: 122 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMK-YRWEAG 181
           DSTR G+RVWLGTFD AE AALAYDQAAF  +G LATLNFPVEVVRESL++M+      G
Sbjct: 107 DSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDG 166

Query: 182 CSPVLALKRRHSIRRK---------------------------KMAEVEKMEKKMKKKKQ 227
            SPV+ALKR+HS+R +                             +     +  +K++  
Sbjct: 167 GSPVMALKRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESG 226

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BLAST of Lsi02G022150 vs. ExPASy Swiss-Prot
Match: Q9LND1 (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.5e-33
Identity = 101/242 (41.74%), Postives = 136/242 (56.20%), Query Frame = 0


Query: 22  HNQSFISGEDNSHQLSFDHFKYLKQILFDDMFV----DTVEGTTSSDSSSCSSPVVMQVK 81
           +  +F+SGE +    S   +   +  L+++ F+    D     +S   + C      +  
Sbjct: 3   YQTNFLSGEFSPENSSSSSWSSQESFLWEESFLHQSFDQSFLLSSPTDNYCDDFFAFESS 62

Query: 82  EEMEEGSFSDGVVVQEDHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAA 141
              EEG   +  V  E+  EE+ YRGVR+RPWGK+AAEIRDSTR+G+RVWLGTFD+AEAA
Sbjct: 63  IIKEEG--KEATVAAEE--EEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAA 122

Query: 142 ALAYDQAAFCMRGGLATLNFPVEVVRESLREMK-YRWEAGCSPVLALKRRHSIR-----R 201
           ALAYDQAAF ++G LA LNFP +VV ESLR+M+      G SPV+ALKR+HS+R     +
Sbjct: 123 ALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMRNRPRGK 182

Query: 202 KKMAEVEKMEK-----------------KMKKKKQSV----------VVFEDLGVEYLEE 227
           KK +    +                     + +KQSV          VV EDLG EYLEE
Sbjct: 183 KKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDLGAEYLEE 240

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BLAST of Lsi02G022150 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.1e-22
Identity = 50/66 (75.76%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 101 YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVE 160
           YRGVRRRPWGKYAAEIRDS R G RVWLGTF++AE AALAYD+AAF MRG  A LNFP E
Sbjct: 59  YRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSE 118

Query: 161 VVRESL 167
           +V  S+
Sbjct: 119 IVNASV 124

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BLAST of Lsi02G022150 vs. ExPASy TrEMBL
Match: A0A0A0K4U4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G375820 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.4e-90
Identity = 193/238 (81.09%), Postives = 207/238 (86.97%), Query Frame = 0


Query: 1   MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGT 60
           MSI++D FG NYQENFLWNN+HNQSFISGE+     SFD F YL  +LFDDM V   E  
Sbjct: 1   MSILSDFFG-NYQENFLWNNDHNQSFISGEET----SFD-FNYLNDMLFDDM-VFAEETM 60

Query: 61  TSSDSSSCSSPVVMQVKE-----EMEEGSFSDGVVVQED--HKEERVYRGVRRRPWGKYA 120
           +SSDSSSCSSP+ +QVKE     E+EEGS  D VVV+ED  HKEERVYRGVRRRPWGKYA
Sbjct: 61  SSSDSSSCSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYA 120

Query: 121 AEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRW 180
           AEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFP+EVVRESLREMKYRW
Sbjct: 121 AEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRW 180

Query: 181 EAGCSPVLALKRRHSIRRKKMAEVEKMEKK-MKKKKQSVVVFEDLGVEYLEELLSLTS 231
           E G SPVLALKRRHSI+RK+MAEVEKMEKK MKKKK+SVVVFEDLGVEYLEELLSLTS
Sbjct: 181 EVGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKSVVVFEDLGVEYLEELLSLTS 231

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BLAST of Lsi02G022150 vs. ExPASy TrEMBL
Match: A0A5D3C9K8 (Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00670 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.9e-88
Identity = 192/240 (80.00%), Postives = 208/240 (86.67%), Query Frame = 0


Query: 1   MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGT 60
           MSIV+DLFG NYQENFLWNN+H  S ISG++ S   SFD F YL ++LFDDM     E T
Sbjct: 1   MSIVSDLFG-NYQENFLWNNDHCGSLISGQEES---SFD-FNYLNKMLFDDMVSVAAEET 60

Query: 61  -TSSDSSSCSSPVVMQVKE-----EMEEGSFSDGVVVQED--HKEERVYRGVRRRPWGKY 120
            +SSDSSSCSS +VMQVKE     E++EGSFS+ VVV+ED  HKEERVYRGVRRRPWGKY
Sbjct: 61  MSSSDSSSCSSSIVMQVKEEVVEVEVDEGSFSEDVVVEEDQSHKEERVYRGVRRRPWGKY 120

Query: 121 AAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYR 180
           AAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFP+EVVRESLREMKYR
Sbjct: 121 AAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYR 180

Query: 181 WEAGCSPVLALKRRHSIRRKKMAEVEKMEKKM--KKKKQSVVVFEDLGVEYLEELLSLTS 231
            E G SPVLALKRRHSI+RK+MAEVEKMEKKM  KKKK+SVVVFEDLGVEYLEELLSLTS
Sbjct: 181 REVGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKKSVVVFEDLGVEYLEELLSLTS 235

[Close]

BLAST of Lsi02G022150 vs. ExPASy TrEMBL
Match: A0A1S3BQG1 (ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC103492600 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.9e-88
Identity = 192/240 (80.00%), Postives = 208/240 (86.67%), Query Frame = 0


Query: 1   MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGT 60
           MSIV+DLFG NYQENFLWNN+H  S ISG++ S   SFD F YL ++LFDDM     E T
Sbjct: 1   MSIVSDLFG-NYQENFLWNNDHCGSLISGQEES---SFD-FNYLNKMLFDDMVSVAAEET 60

Query: 61  -TSSDSSSCSSPVVMQVKE-----EMEEGSFSDGVVVQED--HKEERVYRGVRRRPWGKY 120
            +SSDSSSCSS +VMQVKE     E++EGSFS+ VVV+ED  HKEERVYRGVRRRPWGKY
Sbjct: 61  MSSSDSSSCSSSIVMQVKEEVVEVEVDEGSFSEDVVVEEDQSHKEERVYRGVRRRPWGKY 120

Query: 121 AAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYR 180
           AAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFP+EVVRESLREMKYR
Sbjct: 121 AAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYR 180

Query: 181 WEAGCSPVLALKRRHSIRRKKMAEVEKMEKKM--KKKKQSVVVFEDLGVEYLEELLSLTS 231
            E G SPVLALKRRHSI+RK+MAEVEKMEKKM  KKKK+SVVVFEDLGVEYLEELLSLTS
Sbjct: 181 REVGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKKSVVVFEDLGVEYLEELLSLTS 235

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BLAST of Lsi02G022150 vs. ExPASy TrEMBL
Match: A0A6J1H6Z0 (ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111460680 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.6e-73
Identity = 170/232 (73.28%), Postives = 187/232 (80.60%), Query Frame = 0


Query: 1   MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGT 60
           MS+   LFG  YQENF       ++F  G+ NSH LSF HF YL+++LF DM +     +
Sbjct: 1   MSLHNHLFG--YQENF-------ENF-PGKQNSH-LSF-HFNYLEEMLFADMSL----SS 60

Query: 61  TSSDSSSCSSPVVMQVKEEMEEGSFSDGVVVQ--EDHKEERVYRGVRRRPWGKYAAEIRD 120
           +SSDSS C SP  M VKEE+E+G     ++VQ  +  KEER YRGVRRRPWGKYAAEIRD
Sbjct: 61  SSSDSSPCLSP-EMHVKEEIEDGD----IIVQDAQTQKEERAYRGVRRRPWGKYAAEIRD 120

Query: 121 STRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGCS 180
           STRQGVRVWLGTFDSAEAAALAYDQAAFCMRG LATLNFPVEVVRESL EMKYRWE GCS
Sbjct: 121 STRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCS 180

Query: 181 PVLALKRRHSIRRKKMAEVEKMEKKMKKKKQSVVVFEDLGVEYLEELLSLTS 231
           PVLALKRRH+IRRKKMAE EKMEKKMKKKK +VVVFEDLGVEYLEELLSLTS
Sbjct: 181 PVLALKRRHTIRRKKMAEAEKMEKKMKKKK-NVVVFEDLGVEYLEELLSLTS 210

[Close]

BLAST of Lsi02G022150 vs. ExPASy TrEMBL
Match: A0A6J1KW25 (ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111497706 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 6.1e-73
Identity = 168/232 (72.41%), Postives = 185/232 (79.74%), Query Frame = 0


Query: 1   MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGT 60
           MS+   LFG  YQENF            G++NSH LSFD F YL+++LF DM   ++  +
Sbjct: 1   MSLDNHLFG--YQENF--------RTFPGKENSH-LSFD-FNYLEEMLFADM--SSLSSS 60

Query: 61  TSSDSSSCSSPVVMQVKEEMEEGSFSDGVVVQEDH--KEERVYRGVRRRPWGKYAAEIRD 120
           +SSDSS C SP  M VKEE+E+G     +VVQ+D   KEER YRGVRRRPWGKYAAEIRD
Sbjct: 61  SSSDSSPCLSP-EMHVKEEIEDGD----IVVQDDRTPKEERAYRGVRRRPWGKYAAEIRD 120

Query: 121 STRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGCS 180
           STRQGVRVWLGTFDSAEAAALAYDQAAFCMRG LATLNFP EVVRESL EMKYRWE GCS
Sbjct: 121 STRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPAEVVRESLYEMKYRWEVGCS 180

Query: 181 PVLALKRRHSIRRKKMAEVEKMEKKMKKKKQSVVVFEDLGVEYLEELLSLTS 231
           PVLALKRRH+IRRKK+AE EKMEKKMKKK  +VVVFEDLGVEYLEELLSLTS
Sbjct: 181 PVLALKRRHTIRRKKIAEAEKMEKKMKKK--NVVVFEDLGVEYLEELLSLTS 211

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BLAST of Lsi02G022150 vs. NCBI nr
Match: XP_038899832.1 (ethylene-response factor C3-like [Benincasa hispida])

HSP 1 Score: 383.6 bits (984), Expect = 1.2e-102
Identity = 207/233 (88.84%), Postives = 219/233 (93.99%), Query Frame = 0


Query: 1   MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGT 60
           MSIV+DLFG NYQE+FLWNNNHN+SFISGE++    SFD F YLK++LFDDMFV+  EGT
Sbjct: 1   MSIVSDLFG-NYQESFLWNNNHNESFISGEES----SFD-FNYLKEMLFDDMFVEVAEGT 60

Query: 61  TSSDSSSCSSPVVMQVKEEM-EEGSFSDGVVVQED--HKEERVYRGVRRRPWGKYAAEIR 120
           TSSDSSSCSSPVVMQVKEE+ EEGSFSD +VVQED  HKEERVYRGVRRRPWGKYAAEIR
Sbjct: 61  TSSDSSSCSSPVVMQVKEEIEEEGSFSDDIVVQEDQSHKEERVYRGVRRRPWGKYAAEIR 120

Query: 121 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGC 180
           DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGC
Sbjct: 121 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGC 180

Query: 181 SPVLALKRRHSIRRKKMAEVEKMEKKMKKKKQSVVVFEDLGVEYLEELLSLTS 231
           SPVLALKRRHSIRRKKMAEVEKMEKKM KKK++VVVFEDLGVEYLEELLSLTS
Sbjct: 181 SPVLALKRRHSIRRKKMAEVEKMEKKMMKKKKTVVVFEDLGVEYLEELLSLTS 227

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BLAST of Lsi02G022150 vs. NCBI nr
Match: XP_004148976.1 (ethylene-response factor C3 [Cucumis sativus] >KGN44740.1 hypothetical protein Csa_016163 [Cucumis sativus])

HSP 1 Score: 341.7 bits (875), Expect = 5.1e-90
Identity = 193/238 (81.09%), Postives = 207/238 (86.97%), Query Frame = 0


Query: 1   MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGT 60
           MSI++D FG NYQENFLWNN+HNQSFISGE+     SFD F YL  +LFDDM V   E  
Sbjct: 1   MSILSDFFG-NYQENFLWNNDHNQSFISGEET----SFD-FNYLNDMLFDDM-VFAEETM 60

Query: 61  TSSDSSSCSSPVVMQVKE-----EMEEGSFSDGVVVQED--HKEERVYRGVRRRPWGKYA 120
           +SSDSSSCSSP+ +QVKE     E+EEGS  D VVV+ED  HKEERVYRGVRRRPWGKYA
Sbjct: 61  SSSDSSSCSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYA 120

Query: 121 AEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRW 180
           AEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFP+EVVRESLREMKYRW
Sbjct: 121 AEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRW 180

Query: 181 EAGCSPVLALKRRHSIRRKKMAEVEKMEKK-MKKKKQSVVVFEDLGVEYLEELLSLTS 231
           E G SPVLALKRRHSI+RK+MAEVEKMEKK MKKKK+SVVVFEDLGVEYLEELLSLTS
Sbjct: 181 EVGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKSVVVFEDLGVEYLEELLSLTS 231

[Close]

BLAST of Lsi02G022150 vs. NCBI nr
Match: XP_008451254.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo] >KAA0059644.1 ethylene-responsive transcription factor 1B-like [Cucumis melo var. makuwa] >TYK08175.1 ethylene-responsive transcription factor 1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 8.1e-88
Identity = 192/240 (80.00%), Postives = 208/240 (86.67%), Query Frame = 0


Query: 1   MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGT 60
           MSIV+DLFG NYQENFLWNN+H  S ISG++ S   SFD F YL ++LFDDM     E T
Sbjct: 1   MSIVSDLFG-NYQENFLWNNDHCGSLISGQEES---SFD-FNYLNKMLFDDMVSVAAEET 60

Query: 61  -TSSDSSSCSSPVVMQVKE-----EMEEGSFSDGVVVQED--HKEERVYRGVRRRPWGKY 120
            +SSDSSSCSS +VMQVKE     E++EGSFS+ VVV+ED  HKEERVYRGVRRRPWGKY
Sbjct: 61  MSSSDSSSCSSSIVMQVKEEVVEVEVDEGSFSEDVVVEEDQSHKEERVYRGVRRRPWGKY 120

Query: 121 AAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYR 180
           AAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFP+EVVRESLREMKYR
Sbjct: 121 AAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYR 180

Query: 181 WEAGCSPVLALKRRHSIRRKKMAEVEKMEKKM--KKKKQSVVVFEDLGVEYLEELLSLTS 231
            E G SPVLALKRRHSI+RK+MAEVEKMEKKM  KKKK+SVVVFEDLGVEYLEELLSLTS
Sbjct: 181 REVGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKKSVVVFEDLGVEYLEELLSLTS 235

[Close]

BLAST of Lsi02G022150 vs. NCBI nr
Match: XP_023514563.1 (ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.3 bits (739), Expect = 3.0e-74
Identity = 173/232 (74.57%), Postives = 189/232 (81.47%), Query Frame = 0


Query: 1   MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGT 60
           MS+   LFG  YQENF       ++F  G+ NSH LSF HF YL+++LF DM + +   +
Sbjct: 1   MSLHNHLFG--YQENF-------ENF-PGKQNSH-LSF-HFNYLEEMLFADMSLSS--SS 60

Query: 61  TSSDSSSCSSPVVMQVKEEMEEGSFSDGVVVQEDH--KEERVYRGVRRRPWGKYAAEIRD 120
           +SSDSS C SP  M VKEE+E+G     +VVQED   KEER YRGVRRRPWGKYAAEIRD
Sbjct: 61  SSSDSSPCLSP-EMHVKEEIEDGD----IVVQEDRTPKEERAYRGVRRRPWGKYAAEIRD 120

Query: 121 STRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGCS 180
           STRQGVRVWLGTFDSAEAAALAYDQAAFCMRG LATLNFPVEVVRESL EMKYRWE GCS
Sbjct: 121 STRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCS 180

Query: 181 PVLALKRRHSIRRKKMAEVEKMEKKMKKKKQSVVVFEDLGVEYLEELLSLTS 231
           PVLALKRRH+IRRKKMAE EKMEKKMKKKK +VVVFEDLGVEYLEELLSLTS
Sbjct: 181 PVLALKRRHTIRRKKMAEAEKMEKKMKKKK-NVVVFEDLGVEYLEELLSLTS 212

[Close]

BLAST of Lsi02G022150 vs. NCBI nr
Match: KAG6593075.1 (Ethylene-response factor C3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.0 bits (728), Expect = 5.6e-73
Identity = 170/232 (73.28%), Postives = 188/232 (81.03%), Query Frame = 0


Query: 1   MSIVTDLFGNNYQENFLWNNNHNQSFISGEDNSHQLSFDHFKYLKQILFDDMFVDTVEGT 60
           MS+   LFG  YQENF       ++F  G+ NSH LSF HF YL+++LF DM + +   +
Sbjct: 1   MSLHNHLFG--YQENF-------ENF-PGKQNSH-LSF-HFNYLEEMLFADMSLSS--SS 60

Query: 61  TSSDSSSCSSPVVMQVKEEMEEGSFSDGVVVQ--EDHKEERVYRGVRRRPWGKYAAEIRD 120
           +SSDSS C SP  M VKEE+E+G     ++VQ  +  KEER YRGVRRRPWGKYAAEIRD
Sbjct: 61  SSSDSSPCLSP-EMHVKEEIEDGD----IIVQDAQTQKEERAYRGVRRRPWGKYAAEIRD 120

Query: 121 STRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGCS 180
           STRQGVRVWLGTFDSAEAAALAYDQAAFCMRG LATLNFPVEVVRESL EMKYRWE GCS
Sbjct: 121 STRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCS 180

Query: 181 PVLALKRRHSIRRKKMAEVEKMEKKMKKKKQSVVVFEDLGVEYLEELLSLTS 231
           PVLALKRRH+IRRKKMAE EKMEKKMKKKK +VVVFEDLGVEYLEELLSLTS
Sbjct: 181 PVLALKRRHTIRRKKMAEAEKMEKKMKKKK-NVVVFEDLGVEYLEELLSLTS 212

[Close]

BLAST of Lsi02G022150 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 160.2 bits (404), Expect = 1.9e-39
Identity = 98/192 (51.04%), Postives = 119/192 (61.98%), Query Frame = 0


Query: 56  TVEGTTSSDSSSCSSPVVMQVKEEMEEGSFSDGVVVQ-------------------EDHK 115
           ++  +  S SSS S+   +   E   E  F  G++ Q                      K
Sbjct: 18  SIGSSPDSFSSSSSNNYSLPFNENDSEEMFLYGLIEQSTQQTYIDSDSQDLPIKSVSSRK 77

Query: 116 EERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLN 175
            E+ YRGVRRRPWGK+AAEIRDSTR G+RVWLGTF+SAE AALAYDQAAF MRG  A LN
Sbjct: 78  SEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILN 137

Query: 176 FPVEVVRESLREMKYRWEAGCSPVLALKRRHSIRRKKMAEVEKME--KKMKKKKQSVVVF 227
           F  E V+ESL E+KY +E GCSPV+ALKR+HS+RR+   +  K         K  +VVVF
Sbjct: 138 FSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDHRSVKLDNVVVF 197

[Close]

BLAST of Lsi02G022150 vs. TAIR 10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15 )

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-38
Identity = 98/197 (49.75%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 62  SSDSSSCSSPVVMQVKEEMEEGSFSDGVVVQEDHK----EERVYRGVRRRPWGKYAAEIR 121
           S D  S  SP +M +KEE++ G  S+    +E+ K    EER YRGVR+RPWGK+AAEIR
Sbjct: 47  SDDFFSFESPEMM-IKEEIQNGDVSNS---EEEEKVGIDEERSYRGVRKRPWGKFAAEIR 106

Query: 122 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMK-YRWEAG 181
           DSTR G+RVWLGTFD AE AALAYDQAAF  +G LATLNFPVEVVRESL++M+      G
Sbjct: 107 DSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDG 166

Query: 182 CSPVLALKRRHSIRRK---------------------------KMAEVEKMEKKMKKKKQ 227
            SPV+ALKR+HS+R +                             +     +  +K++  
Sbjct: 167 GSPVMALKRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESG 226

[Close]

BLAST of Lsi02G022150 vs. TAIR 10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59 )

HSP 1 Score: 143.3 bits (360), Expect = 2.5e-34
Identity = 101/242 (41.74%), Postives = 136/242 (56.20%), Query Frame = 0


Query: 22  HNQSFISGEDNSHQLSFDHFKYLKQILFDDMFV----DTVEGTTSSDSSSCSSPVVMQVK 81
           +  +F+SGE +    S   +   +  L+++ F+    D     +S   + C      +  
Sbjct: 3   YQTNFLSGEFSPENSSSSSWSSQESFLWEESFLHQSFDQSFLLSSPTDNYCDDFFAFESS 62

Query: 82  EEMEEGSFSDGVVVQEDHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAA 141
              EEG   +  V  E+  EE+ YRGVR+RPWGK+AAEIRDSTR+G+RVWLGTFD+AEAA
Sbjct: 63  IIKEEG--KEATVAAEE--EEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAA 122

Query: 142 ALAYDQAAFCMRGGLATLNFPVEVVRESLREMK-YRWEAGCSPVLALKRRHSIR-----R 201
           ALAYDQAAF ++G LA LNFP +VV ESLR+M+      G SPV+ALKR+HS+R     +
Sbjct: 123 ALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMRNRPRGK 182

Query: 202 KKMAEVEKMEK-----------------KMKKKKQSV----------VVFEDLGVEYLEE 227
           KK +    +                     + +KQSV          VV EDLG EYLEE
Sbjct: 183 KKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDLGAEYLEE 240

[Close]

BLAST of Lsi02G022150 vs. TAIR 10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 5.3e-21
Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 97  EERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLN 156
           E   YRGVRRRPWGKYAAEIRDS + G RVWLGTFD+AE AA AYDQAA+ MRG  A LN
Sbjct: 11  EHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILN 70

Query: 157 FPVE 161
           FP E
Sbjct: 71  FPHE 74

[Close]

BLAST of Lsi02G022150 vs. TAIR 10
Match: AT5G61600.1 (ethylene response factor 104 )

HSP 1 Score: 98.6 bits (244), Expect = 6.9e-21
Identity = 46/69 (66.67%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 93  EDHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGL 152
           E  +EER YRGVRRRPWGKYAAEIRD  ++G R+WLGT+D+A  A  AYDQAAF +RG  
Sbjct: 80  EKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRK 139

Query: 153 ATLNFPVEV 162
           A LNFP++V
Sbjct: 140 AILNFPLDV 148

The following BLAST results are available for this feature:

BLAST of Lsi02G022150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A3Q7I5Y9	1.8e-42	59.60	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
Q8LDC8	2.7e-38	51.04	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q8VYM0	3.0e-37	49.75	Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LND1	3.5e-33	41.74	Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 ...	[more]
O04681	6.1e-22	75.76	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]

BLAST of Lsi02G022150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4U4	2.4e-90	81.09	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G375820 PE=...	[more]
A0A5D3C9K8	3.9e-88	80.00	Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BQG1	3.9e-88	80.00	ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1H6Z0	4.6e-73	73.28	ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1KW25	6.1e-73	72.41	ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Lsi02G022150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899832.1	1.2e-102	88.84	ethylene-response factor C3-like [Benincasa hispida]	[more]
XP_004148976.1	5.1e-90	81.09	ethylene-response factor C3 [Cucumis sativus] >KGN44740.1 hypothetical protein C...	[more]
XP_008451254.1	8.1e-88	80.00	PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo] >KAA0...	[more]
XP_023514563.1	3.0e-74	74.57	ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo]	[more]
KAG6593075.1	5.6e-73	73.28	Ethylene-response factor C3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lsi02G022150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23240.1	1.9e-39	51.04	ethylene response factor 1	[more]
AT2G31230.1	2.2e-38	49.75	ethylene-responsive element binding factor 15	[more]
AT1G06160.1	2.5e-34	41.74	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]
AT5G43410.1	5.3e-21	75.00	Integrase-type DNA-binding superfamily protein	[more]
AT5G61600.1	6.9e-21	66.67	ethylene response factor 104	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 190..210
None	No IPR available	PANTHER	PTHR31190:SF132	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B	coord: 33..228
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 101..112 score: 71.67 coord: 124..140 score: 65.88
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 100..164 e-value: 5.7E-37 score: 138.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 100..150 e-value: 4.4E-15 score: 55.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 100..158 score: 22.787136
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 101..159 e-value: 1.04306E-20 score: 80.3935
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 100..161 e-value: 3.1E-26 score: 93.3
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 33..228
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 100..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G022150.1	Lsi02G022150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity