Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCAGATTTTGAACTAAAGATCAGCCCAACAAGAGACGGTGATCCTTCCTCAACCTTTGAGCTTCAGTTGACCAAAGGCACTGCCACTCCTTTTTTCTACTCTAATGAAACTAATTCCATGTTCATTCTCACTGCCAAACTCACAGGTCTGCCTTTTTTTATCTCTCATTCTTTTTCTTTTGTAGTCTCTGTCTATTCTCTCTTTTCATTTTTAGGTTTCTCTCTCATTTTTCTGTTGCAGGCTTTGCAGCAGATGACATTGTGATAACAATTAATGGAAGCAGTACTCAGATTGAGATTGGCTGGGGAAAACCTGTTCGGAAAATGGAGATTACAGGAAGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATTTTTCGAATTCCAGATGGCGTGGTTTTGGACGAAATCAAGGCAACATATAATGACGAAGAATCGATTTTGAAGATTTCGATGCCGAAATCAGTGGATGGAATGCTTGGGGTAGGAATTGAAGAAGTAAAGGAACAGGAAGCTGGTGAAGCCACATTTGAATCTCAGGATTATGAAGAGGAGGAGCTGCTTGAGACTCTGGAAACTGGCAGAAAGACTAATTTGGTTGACGAAAATCATGAAAAGGAGGAAGACGATGCCGATTATGGAGAAGTTGAAGAAGAAAATGCCGAACCCGAAGCATTTCATAAGATAGAATATGTAGCAGAAATGCCGCCAGAAGAGATCGAGAAGCTGAAGGGCAGTGAGATGGATCAAGATATTGATGGAGATTCCCATGATGACTACTCTGAAAGGAAACAGACAGTAAAAGTAGCAACAAAAACTACCGAGTATGAGGCCACAAGAGAAAATGTTAATGGAGAAATCAAGGCTCCCAAGGTTAGAAGTAAGGAGGGGATAGAAGTGGCTGAAGGAACAACCAACCATCAAAAAGAAAAACGACTCGATGCTGAATCAAGTAATAGTGATAAAGCAAATGTCAAAATGCAATCACAAGCTTCTATTGATCGAGAGGCACAAGTATTAGACTGCGAACTTTTGCAGCCAAATCGACAGACTCGAGCAGAATCGGGGAAGCAGGAAACATATAAAAATGTTCAGGAATTGAAAGAGCTTGAAACCGATGAAGAACCTGAAGATATAGGAAGACCGTATTTGCAAAGCCCTGCACATCAGCATGAAGAAAAAGGAGTTGATCATAAAAAAGGAAGAAGTTTCCAAACAAAAGATGAAATTAAAGACACAAGAGAAGAATGCAAGTCAACACATGAAGATTCCAGCAACGAAGCAAAACAAGAGAAGAAACAAGATTCAAAACAGTTTAAAATGCGTACTCCAATCATCATTGCAGGGTCAGCTCTTCTCGCATCCCTTGCAATTATTGTGTTTAACTTAGTGAAAAGTAAAAGACGAGAGAAAAATATGAGAGGTTAA
mRNA sequence
ATGGGATCAGATTTTGAACTAAAGATCAGCCCAACAAGAGACGGTGATCCTTCCTCAACCTTTGAGCTTCAGTTGACCAAAGGCACTGCCACTCCTTTTTTCTACTCTAATGAAACTAATTCCATGTTCATTCTCACTGCCAAACTCACAGGCTTTGCAGCAGATGACATTGTGATAACAATTAATGGAAGCAGTACTCAGATTGAGATTGGCTGGGGAAAACCTGTTCGGAAAATGGAGATTACAGGAAGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATTTTTCGAATTCCAGATGGCGTGGTTTTGGACGAAATCAAGGCAACATATAATGACGAAGAATCGATTTTGAAGATTTCGATGCCGAAATCAGTGGATGGAATGCTTGGGGTAGGAATTGAAGAAGTAAAGGAACAGGAAGCTGGTGAAGCCACATTTGAATCTCAGGATTATGAAGAGGAGGAGCTGCTTGAGACTCTGGAAACTGGCAGAAAGACTAATTTGGTTGACGAAAATCATGAAAAGGAGGAAGACGATGCCGATTATGGAGAAGTTGAAGAAGAAAATGCCGAACCCGAAGCATTTCATAAGATAGAATATGTAGCAGAAATGCCGCCAGAAGAGATCGAGAAGCTGAAGGGCAGTGAGATGGATCAAGATATTGATGGAGATTCCCATGATGACTACTCTGAAAGGAAACAGACAGTAAAAGTAGCAACAAAAACTACCGAGTATGAGGCCACAAGAGAAAATGTTAATGGAGAAATCAAGGCTCCCAAGGTTAGAAGTAAGGAGGGGATAGAAGTGGCTGAAGGAACAACCAACCATCAAAAAGAAAAACGACTCGATGCTGAATCAAGTAATAGTGATAAAGCAAATGTCAAAATGCAATCACAAGCTTCTATTGATCGAGAGGCACAAGTATTAGACTGCGAACTTTTGCAGCCAAATCGACAGACTCGAGCAGAATCGGGGAAGCAGGAAACATATAAAAATGTTCAGGAATTGAAAGAGCTTGAAACCGATGAAGAACCTGAAGATATAGGAAGACCGTATTTGCAAAGCCCTGCACATCAGCATGAAGAAAAAGGAGTTGATCATAAAAAAGGAAGAAGTTTCCAAACAAAAGATGAAATTAAAGACACAAGAGAAGAATGCAAGTCAACACATGAAGATTCCAGCAACGAAGCAAAACAAGAGAAGAAACAAGATTCAAAACAGTTTAAAATGCGTACTCCAATCATCATTGCAGGGTCAGCTCTTCTCGCATCCCTTGCAATTATTGTGTTTAACTTAGTGAAAAGTAAAAGACGAGAGAAAAATATGAGAGGTTAA
Coding sequence (CDS)
ATGGGATCAGATTTTGAACTAAAGATCAGCCCAACAAGAGACGGTGATCCTTCCTCAACCTTTGAGCTTCAGTTGACCAAAGGCACTGCCACTCCTTTTTTCTACTCTAATGAAACTAATTCCATGTTCATTCTCACTGCCAAACTCACAGGCTTTGCAGCAGATGACATTGTGATAACAATTAATGGAAGCAGTACTCAGATTGAGATTGGCTGGGGAAAACCTGTTCGGAAAATGGAGATTACAGGAAGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATTTTTCGAATTCCAGATGGCGTGGTTTTGGACGAAATCAAGGCAACATATAATGACGAAGAATCGATTTTGAAGATTTCGATGCCGAAATCAGTGGATGGAATGCTTGGGGTAGGAATTGAAGAAGTAAAGGAACAGGAAGCTGGTGAAGCCACATTTGAATCTCAGGATTATGAAGAGGAGGAGCTGCTTGAGACTCTGGAAACTGGCAGAAAGACTAATTTGGTTGACGAAAATCATGAAAAGGAGGAAGACGATGCCGATTATGGAGAAGTTGAAGAAGAAAATGCCGAACCCGAAGCATTTCATAAGATAGAATATGTAGCAGAAATGCCGCCAGAAGAGATCGAGAAGCTGAAGGGCAGTGAGATGGATCAAGATATTGATGGAGATTCCCATGATGACTACTCTGAAAGGAAACAGACAGTAAAAGTAGCAACAAAAACTACCGAGTATGAGGCCACAAGAGAAAATGTTAATGGAGAAATCAAGGCTCCCAAGGTTAGAAGTAAGGAGGGGATAGAAGTGGCTGAAGGAACAACCAACCATCAAAAAGAAAAACGACTCGATGCTGAATCAAGTAATAGTGATAAAGCAAATGTCAAAATGCAATCACAAGCTTCTATTGATCGAGAGGCACAAGTATTAGACTGCGAACTTTTGCAGCCAAATCGACAGACTCGAGCAGAATCGGGGAAGCAGGAAACATATAAAAATGTTCAGGAATTGAAAGAGCTTGAAACCGATGAAGAACCTGAAGATATAGGAAGACCGTATTTGCAAAGCCCTGCACATCAGCATGAAGAAAAAGGAGTTGATCATAAAAAAGGAAGAAGTTTCCAAACAAAAGATGAAATTAAAGACACAAGAGAAGAATGCAAGTCAACACATGAAGATTCCAGCAACGAAGCAAAACAAGAGAAGAAACAAGATTCAAAACAGTTTAAAATGCGTACTCCAATCATCATTGCAGGGTCAGCTCTTCTCGCATCCCTTGCAATTATTGTGTTTAACTTAGTGAAAAGTAAAAGACGAGAGAAAAATATGAGAGGTTAA
Protein sequence
MGSDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVITINGSSTQIEIGWGKPVRKMEITGRTYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILKISMPKSVDGMLGVGIEEVKEQEAGEATFESQDYEEEELLETLETGRKTNLVDENHEKEEDDADYGEVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSERKQTVKVATKTTEYEATRENVNGEIKAPKVRSKEGIEVAEGTTNHQKEKRLDAESSNSDKANVKMQSQASIDREAQVLDCELLQPNRQTRAESGKQETYKNVQELKELETDEEPEDIGRPYLQSPAHQHEEKGVDHKKGRSFQTKDEIKDTREECKSTHEDSSNEAKQEKKQDSKQFKMRTPIIIAGSALLASLAIIVFNLVKSKRREKNMRG
Homology
BLAST of Lsi02G019710 vs. ExPASy TrEMBL
Match:
A0A6J1CPW6 (uncharacterized protein LOC111013495 OS=Momordica charantia OX=3673 GN=LOC111013495 PE=3 SV=1)
HSP 1 Score: 437.2 bits (1123), Expect = 8.3e-119
Identity = 285/477 (59.75%), Postives = 342/477 (71.70%), Query Frame = 0
Query: 1 MGSDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVIT 60
MG DFELKISP+ S FELQL +GT +P F+SNETNSMFILTAKLTGF+ +DI IT
Sbjct: 34 MGLDFELKISPS---SSFSNFELQLARGTPSP-FWSNETNSMFILTAKLTGFSREDIGIT 93
Query: 61 INGSSTQIEIGWGKPVRKMEITGRTYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESI 120
ING+ T+IEIGWG+PV++MEIT YKKETETRRFKKIFRIPDGVVLDEIKATYNDEESI
Sbjct: 94 INGTGTRIEIGWGQPVQRMEITRWMYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESI 153
Query: 121 LKISMPKSVDGMLGVGIEEVKEQEAGEATFESQDYEEEEL---LETLETGRKTNLVDENH 180
LKI MPK VDG+LGVGIEEVKEQ+ GE ESQD E EE+ E ETGR+T V
Sbjct: 154 LKIVMPKLVDGILGVGIEEVKEQDVGEDALESQDSEAEEIPEVTEGFETGRETKFV---- 213
Query: 181 EKEEDDADYGEVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSERK 240
+DA G E NA PE K EY+AE EE EKLKG EM+ IDG S + YSE +
Sbjct: 214 ----EDAANGVFEGANATPEPSPKREYLAETTQEETEKLKGDEMEH-IDGVS-NHYSESE 273
Query: 241 QTVKVATKTTEYEATREN---VNGEIKAPKVRSKEGIEVAEGTT----NHQKEK-RLDAE 300
++ K+ T+ E +N V+ EI PKVRS +GIE+ EGT+ NHQKEK ++E
Sbjct: 274 KSEKLTTEIAEAPKRWDNGGIVDSEIIIPKVRSVKGIELDEGTSKGTANHQKEKGEPNSE 333
Query: 301 SSNSDKA-------NVKMQSQASIDREAQVLD-CELLQPNRQTRAE------SGKQETYK 360
+ N A ++K+QSQA++DR+ +V D EL QPN + +AE G +ETY+
Sbjct: 334 AHNGSIATMTNKQPDIKIQSQAAVDRDTKVPDKPELSQPNGKIQAEHKIVEQQGNKETYR 393
Query: 361 NVQELKELETDEEPEDIGRPYLQSPAHQHEEKGVDHKKGRSFQTKDEIKDTREEC----K 420
+ E KE ET+ EPE I PYLQSP H+HEEKGV +++G+SFQT+DEIK+ REE +
Sbjct: 394 SAWESKEFETNNEPEYIASPYLQSPEHEHEEKGV-NQQGKSFQTQDEIKEAREESGSPQR 453
Query: 421 STHEDSSNEAKQEKKQDSKQFKMRTPIIIAGSALLASLAIIVFNLVKSKRREKNMRG 449
HE S+ EAKQEK QDSKQFKMRTPIIIAGSALLASLAI+VFN V+SK+REKNMRG
Sbjct: 454 EKHEQSTKEAKQEKIQDSKQFKMRTPIIIAGSALLASLAIVVFNFVRSKKREKNMRG 495
BLAST of Lsi02G019710 vs. ExPASy TrEMBL
Match:
A0A6J1EKH3 (neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111433395 PE=3 SV=1)
HSP 1 Score: 407.9 bits (1047), Expect = 5.4e-110
Identity = 254/408 (62.25%), Postives = 297/408 (72.79%), Query Frame = 0
Query: 3 SDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVITIN 62
S FELKISPTR+ DPSSTFEL L K T+T F+S+ETNSMF+LTAKL GFA DDIVITIN
Sbjct: 5 SHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVITIN 64
Query: 63 GSSTQIEIGWGKPVRKMEITGRTYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILK 122
GS T+IEI WG+PV+KMEIT TYKKETETRRFKKIFRIPDGV+LDEIKATYNDE+SILK
Sbjct: 65 GSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILK 124
Query: 123 ISMPKSVDGMLGVGIEEVKEQEAGEATFESQDYEEEEL------LETLETGRKTNLVDEN 182
I MPK +G+LGVGI+EVKE+EAGEATFESQD E E + LET ETG++T L+++
Sbjct: 125 ILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDT 184
Query: 183 HEKEEDDADYGEVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSER 242
H GE ENA+ EAF K+EY AE PEEIEKLKG+EM +D DG S +DYSE
Sbjct: 185 HGN-------GEFGGENAKREAFSKMEYAAETTPEEIEKLKGNEM-EDTDGGS-NDYSEC 244
Query: 243 KQTVKVATKTTEYEATRENVNGEIKAPKVRSKEGIEVAEGTT----NHQKEK-RLDAESS 302
+Q ATK TEYE T+EN+NG+IK PKV S EGIEVAEGT+ NHQ+EK AE
Sbjct: 245 EQLETGATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQEEKGEGKAEEH 304
Query: 303 NSD-------KANVKMQSQASIDREAQVLDCELLQPNRQTRAESGKQETYKNVQELKELE 362
N D K +VK Q QASID+EAQ L+ E + NR TRAE GK ETY+N +ELK
Sbjct: 305 NGDIATMIKKKLDVKTQPQASIDQEAQTLEQENFKRNRHTRAELGKLETYRNTRELK--- 364
Query: 363 TDEEPEDIGRPYLQSPAHQHEEKGV-DHKKGRSFQTKDEIKDTREECK 392
EPEDI PYLQSPAH+HEEK + D KK ++K R+E +
Sbjct: 365 ---EPEDIEIPYLQSPAHEHEEKEISDEKKTTQSGHTTKVKTGRDEVR 397
BLAST of Lsi02G019710 vs. ExPASy TrEMBL
Match:
A0A6J1J0B1 (uncharacterized protein LOC111480753 OS=Cucurbita maxima OX=3661 GN=LOC111480753 PE=3 SV=1)
HSP 1 Score: 407.5 bits (1046), Expect = 7.1e-110
Identity = 249/382 (65.18%), Postives = 282/382 (73.82%), Query Frame = 0
Query: 3 SDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVITIN 62
S FELKISPTR+ DPSSTFEL L K T+T F+S+ETNSMF+LTAKL GFA DDIVITIN
Sbjct: 5 SHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVITIN 64
Query: 63 GSSTQIEIGWGKPVRKMEITGRTYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILK 122
GS TQIEI WG+PV+KMEIT TYKKETETRRFKKIFRIPDGV+LDEIKATYNDE+SILK
Sbjct: 65 GSGTQIEISWGQPVQKMEITRLTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILK 124
Query: 123 ISMPKSVDGMLGVGIEEVKEQEAGEATFESQDYEEEEL------LETLETGRKTNLVDEN 182
I MPK V+G+LGVGIE VKEQEAG+ATFESQD E E + LET ETG+KT LV++
Sbjct: 125 ILMPKLVEGILGVGIEGVKEQEAGDATFESQDSEAEAIPHAPTDLETPETGKKTKLVEDT 184
Query: 183 HEKEEDDADYGEVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSER 242
H GE ENA+ EAF KIEY AE PEEIEKLKG+EM +D DG S +DYSE
Sbjct: 185 HGN-------GEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEM-EDTDGGS-NDYSES 244
Query: 243 KQTVKVATKTTEYEATRENVNGEIKAPKVRSKEGIEVAEGTT----NHQKEKRLDAESSN 302
+Q ATK TEYE T+EN+NG+I+ PKV S EGIEVAEGT+ NHQKEK +AE N
Sbjct: 245 EQLETGATKATEYEGTKENINGQIQVPKVTSMEGIEVAEGTSQETANHQKEKEGNAEEHN 304
Query: 303 SD-------KANVKMQSQASIDREAQVLDCELLQPNRQTRAESGKQETYKNVQELKELET 362
D K +VK Q QASID+E E + NR TRA GK ETY+N +ELK
Sbjct: 305 GDMATMIKKKPDVKTQPQASIDQEQ-----ENFKQNRHTRAGLGKPETYRNTRELK---- 364
Query: 363 DEEPEDIGRPYLQSPAHQHEEK 368
EPEDI PYLQSPAH+HEEK
Sbjct: 365 --EPEDIEIPYLQSPAHEHEEK 366
BLAST of Lsi02G019710 vs. ExPASy TrEMBL
Match:
A0A5A7UWU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00820 PE=4 SV=1)
HSP 1 Score: 226.9 bits (577), Expect = 1.7e-55
Identity = 191/460 (41.52%), Postives = 239/460 (51.96%), Query Frame = 0
Query: 1 MGSDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVIT 60
MGSDFELKI PT D D SSTFELQL +G+AT L + FA
Sbjct: 49 MGSDFELKIKPTIDDDTSSTFELQLAEGSAT-------------LMKPIPCFA------- 108
Query: 61 INGSSTQIEIGWGKPVRKMEITGRTYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESI 120
T + G VRK ++T ++ GV E+ + +
Sbjct: 109 -----TLVRNVIGTLVRKSDVTLPPQ-------------QLAYGVWFSEVL------KYL 168
Query: 121 LKISMPKSVDGMLGVGIEEVKE-QEAGEATFESQDYEEEELLETLETGRKTNLVDENHEK 180
+SM G+E +K+ + + + + L + + + ++
Sbjct: 169 TMLSMSTH------FGVEPIKDSDQVWPSEVPRSNDRDRSCLRLWKLAERPTWLTVIMKR 228
Query: 181 EEDDADYGEVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSERKQT 240
+ +++++NAE E HKIEYVAE+ P+EIEKLKGSEMD+DID
Sbjct: 229 RKPMLLMEQLKKKNAETERLHKIEYVAEIQPDEIEKLKGSEMDEDID------------- 288
Query: 241 VKVATKTTEYEATRENVNGEIKAPKVRSKEGIEVAE----GTTNHQKEKRLDAESSNSDK 300
PK+RS EGIEVAE GT +H+KE + +AE+ N DK
Sbjct: 289 ----------------------VPKIRSVEGIEVAEVTSKGTASHKKETQTNAEARNGDK 348
Query: 301 AN-------VKMQSQASIDREAQVLDCELLQPNRQTRAESGKQETYKNVQELKELETDEE 360
A VK QSQASIDREA +ELKELETD+E
Sbjct: 349 ATMINKKPYVKTQSQASIDREA---------------------------RELKELETDKE 394
Query: 361 PEDIGRPYLQSPAHQHEEKGVDHKKGRSFQTKDEIKDTREECKSTHEDSSNEAKQEKKQD 420
PEDIG PYLQ PA+QH+EKG D +KGRSFQTK E+KD REECKSTHEDSS EAKQEKKQD
Sbjct: 409 PEDIGSPYLQRPANQHDEKGAD-RKGRSFQTKYEVKDAREECKSTHEDSSKEAKQEKKQD 394
Query: 421 SKQFKMRTPIIIAGSALLASLAIIVFNLVKSKRREKNMRG 449
SKQ KMRT IIIAGSALLASL + FNLVKSK EKN++G
Sbjct: 469 SKQLKMRTSIIIAGSALLASLVTVAFNLVKSK-TEKNVKG 394
BLAST of Lsi02G019710 vs. ExPASy TrEMBL
Match:
A0A5D3CSD6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00020 PE=4 SV=1)
HSP 1 Score: 219.9 bits (559), Expect = 2.1e-53
Identity = 149/272 (54.78%), Postives = 172/272 (63.24%), Query Frame = 0
Query: 188 EVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSERKQTVKVATKTT 247
+++++NAE E HKIEYVAE+ P+EIEKLKGSEMD+DID
Sbjct: 33 QLKKKNAETERLHKIEYVAEIQPDEIEKLKGSEMDEDID--------------------- 92
Query: 248 EYEATRENVNGEIKAPKVRSKEGIEVAE----GTTNHQKEKRLDAESSNSDKAN------ 307
PK+RS EGIEVAE GT +H+KE + +AE+ N DKA
Sbjct: 93 --------------VPKIRSVEGIEVAEVTSKGTASHKKETQTNAEARNGDKATMINKKP 152
Query: 308 -VKMQSQASIDREAQVLDCELLQPNRQTRAESGKQETYKNVQELKELETDEEPEDIGRPY 367
VK QSQASIDREA +ELKELETD+EPEDIG PY
Sbjct: 153 YVKTQSQASIDREA---------------------------RELKELETDKEPEDIGSPY 212
Query: 368 LQSPAHQHEEKGVDHKKGRSFQTKDEIKDTREECKSTHEDSSNEAKQEKKQDSKQFKMRT 427
LQ PA+QH+EKG D +KGRSFQTK E+KD REECKSTHEDSS EAKQEKKQDSKQ KMRT
Sbjct: 213 LQRPANQHDEKGAD-RKGRSFQTKYEVKDAREECKSTHEDSSKEAKQEKKQDSKQLKMRT 240
Query: 428 PIIIAGSALLASLAIIVFNLVKSKRREKNMRG 449
IIIAGSALLASL + FNLVKSK EKN++G
Sbjct: 273 SIIIAGSALLASLVTVAFNLVKSK-TEKNVKG 240
BLAST of Lsi02G019710 vs. NCBI nr
Match:
XP_023521223.1 (neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo] >XP_023522087.1 neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 497.7 bits (1280), Expect = 1.1e-136
Identity = 306/467 (65.52%), Postives = 352/467 (75.37%), Query Frame = 0
Query: 3 SDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVITIN 62
S FELKISPTR+ DPSSTFEL L K T+T F+S+ETNSMF+LTAKL GFA DDIVITIN
Sbjct: 5 SHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVITIN 64
Query: 63 GSSTQIEIGWGKPVRKMEITGRTYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILK 122
GS T+IEI WG+PV+KMEIT TYKKETETRRFKKIFRIPDGV+LDEIKATYNDE+SILK
Sbjct: 65 GSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILK 124
Query: 123 ISMPKSVDGMLGVGIEEVKEQEAGEATFESQDYEEEEL------LETLETGRKTNLVDEN 182
I MPK +G+LGVGI+EVKEQEAG+ATFESQD E E + LET ETG++T L+++
Sbjct: 125 ILMPKLEEGILGVGIQEVKEQEAGKATFESQDSEAEAIPHTPTDLETPETGKETKLIEDT 184
Query: 183 HEKEEDDADYGEVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSER 242
H GE ENA+ EAF KIEY AE PEEIEKLKG+EM +D DG S +DYSE
Sbjct: 185 HGN-------GEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEM-EDTDGGS-NDYSES 244
Query: 243 KQTVKVATKTTEYEATRENVNGEIKAPKVRSKEGIEVAEGTT----NHQKEKRLDAESSN 302
+Q ATK TEYE T+EN+NG+IK PKV S EGIEVAEGT+ NHQKEK +A+ N
Sbjct: 245 EQLETGATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQKEKEGNAKEHN 304
Query: 303 SD-------KANVKMQSQASIDREAQVLDCELLQPNRQTRAESGKQETYKNVQELKELET 362
D K +VK QSQASID+E E + NR TRAE GK ETY+N +ELK
Sbjct: 305 GDMATMIKKKPDVKTQSQASIDQEQ-----ENFKRNRHTRAELGKPETYRNTRELK---- 364
Query: 363 DEEPEDIGRPYLQSPAHQHEEKGVDHKKGRSFQTKDEIKDTREECKS----THEDSSNEA 422
EPEDI PYLQSPAH+HEEK VD +KG+S QTKDE K+ REEC S TH+DSS EA
Sbjct: 365 --EPEDIEIPYLQSPAHEHEEKEVD-QKGKSSQTKDETKEAREECNSPQKVTHQDSSKEA 424
Query: 423 KQEKKQDSKQFKMRTPIIIAGSALLASLAIIVFNLVKSKRREKNMRG 449
KQEK KQFKMR PII+AGSAL+ASL I+VF+LVKSK+REKNMRG
Sbjct: 425 KQEK----KQFKMRIPIIVAGSALVASLVIVVFSLVKSKKREKNMRG 446
BLAST of Lsi02G019710 vs. NCBI nr
Match:
KAG6607636.1 (hypothetical protein SDJN03_00978, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037240.1 hypothetical protein SDJN02_00863, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 489.2 bits (1258), Expect = 3.8e-134
Identity = 300/467 (64.24%), Postives = 349/467 (74.73%), Query Frame = 0
Query: 3 SDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVITIN 62
S FELKISPTR+ DPSSTFEL L K T+T F+S+ETNSMF+LTAKL GFA DDIV+TIN
Sbjct: 5 SHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTIN 64
Query: 63 GSSTQIEIGWGKPVRKMEITGRTYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILK 122
GS T+IEI WG+PV+KMEIT TYKKETETRRFKKIFRIPDGV+LDEIKATYNDE+SILK
Sbjct: 65 GSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILK 124
Query: 123 ISMPKSVDGMLGVGIEEVKEQEAGEATFESQDYEEEEL------LETLETGRKTNLVDEN 182
I MPK +G+LGVGI+EVKE+EAGEATFESQD E E + LET ETG++T L+++
Sbjct: 125 ILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDT 184
Query: 183 HEKEEDDADYGEVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSER 242
H GE+ ENA+ EAF K+EY AE PEEIEKLKG+EM +D DG S +DYSE
Sbjct: 185 HGN-------GELGGENAKREAFSKMEYAAETTPEEIEKLKGNEM-EDTDGGS-NDYSES 244
Query: 243 KQTVKVATKTTEYEATRENVNGEIKAPKVRSKEGIEVAEGTT----NHQKEKRLDAESSN 302
++ ATK TEYE T+EN+NG+IK PKV EGIEVAEGT+ NHQKEK +AE N
Sbjct: 245 ERLETGATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHN 304
Query: 303 SD-------KANVKMQSQASIDREAQVLDCELLQPNRQTRAESGKQETYKNVQELKELET 362
D K +VK Q QASID+E E + NR TR E GK ETY+N +LK
Sbjct: 305 GDMATMIKKKPDVKTQPQASIDQEQ-----ENFKRNRHTRVELGKPETYRNTWKLK---- 364
Query: 363 DEEPEDIGRPYLQSPAHQHEEKGVDHKKGRSFQTKDEIKDTREECKS----THEDSSNEA 422
EPEDI PYLQSPAH+HEEK VD +KG+SFQTKDE K+ REEC S TH+DSS EA
Sbjct: 365 --EPEDIEIPYLQSPAHEHEEKEVD-QKGKSFQTKDETKEAREECNSPQKVTHQDSSKEA 424
Query: 423 KQEKKQDSKQFKMRTPIIIAGSALLASLAIIVFNLVKSKRREKNMRG 449
KQEK KQFKMR PII+AGSAL+A+L I VF+LVKSK+REKNMRG
Sbjct: 425 KQEK----KQFKMRIPIIVAGSALVATLVIAVFSLVKSKKREKNMRG 446
BLAST of Lsi02G019710 vs. NCBI nr
Match:
XP_022143634.1 (uncharacterized protein LOC111013495 [Momordica charantia])
HSP 1 Score: 437.2 bits (1123), Expect = 1.7e-118
Identity = 285/477 (59.75%), Postives = 342/477 (71.70%), Query Frame = 0
Query: 1 MGSDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVIT 60
MG DFELKISP+ S FELQL +GT +P F+SNETNSMFILTAKLTGF+ +DI IT
Sbjct: 34 MGLDFELKISPS---SSFSNFELQLARGTPSP-FWSNETNSMFILTAKLTGFSREDIGIT 93
Query: 61 INGSSTQIEIGWGKPVRKMEITGRTYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESI 120
ING+ T+IEIGWG+PV++MEIT YKKETETRRFKKIFRIPDGVVLDEIKATYNDEESI
Sbjct: 94 INGTGTRIEIGWGQPVQRMEITRWMYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESI 153
Query: 121 LKISMPKSVDGMLGVGIEEVKEQEAGEATFESQDYEEEEL---LETLETGRKTNLVDENH 180
LKI MPK VDG+LGVGIEEVKEQ+ GE ESQD E EE+ E ETGR+T V
Sbjct: 154 LKIVMPKLVDGILGVGIEEVKEQDVGEDALESQDSEAEEIPEVTEGFETGRETKFV---- 213
Query: 181 EKEEDDADYGEVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSERK 240
+DA G E NA PE K EY+AE EE EKLKG EM+ IDG S + YSE +
Sbjct: 214 ----EDAANGVFEGANATPEPSPKREYLAETTQEETEKLKGDEMEH-IDGVS-NHYSESE 273
Query: 241 QTVKVATKTTEYEATREN---VNGEIKAPKVRSKEGIEVAEGTT----NHQKEK-RLDAE 300
++ K+ T+ E +N V+ EI PKVRS +GIE+ EGT+ NHQKEK ++E
Sbjct: 274 KSEKLTTEIAEAPKRWDNGGIVDSEIIIPKVRSVKGIELDEGTSKGTANHQKEKGEPNSE 333
Query: 301 SSNSDKA-------NVKMQSQASIDREAQVLD-CELLQPNRQTRAE------SGKQETYK 360
+ N A ++K+QSQA++DR+ +V D EL QPN + +AE G +ETY+
Sbjct: 334 AHNGSIATMTNKQPDIKIQSQAAVDRDTKVPDKPELSQPNGKIQAEHKIVEQQGNKETYR 393
Query: 361 NVQELKELETDEEPEDIGRPYLQSPAHQHEEKGVDHKKGRSFQTKDEIKDTREEC----K 420
+ E KE ET+ EPE I PYLQSP H+HEEKGV +++G+SFQT+DEIK+ REE +
Sbjct: 394 SAWESKEFETNNEPEYIASPYLQSPEHEHEEKGV-NQQGKSFQTQDEIKEAREESGSPQR 453
Query: 421 STHEDSSNEAKQEKKQDSKQFKMRTPIIIAGSALLASLAIIVFNLVKSKRREKNMRG 449
HE S+ EAKQEK QDSKQFKMRTPIIIAGSALLASLAI+VFN V+SK+REKNMRG
Sbjct: 454 EKHEQSTKEAKQEKIQDSKQFKMRTPIIIAGSALLASLAIVVFNFVRSKKREKNMRG 495
BLAST of Lsi02G019710 vs. NCBI nr
Match:
XP_022926215.1 (neurofilament medium polypeptide-like [Cucurbita moschata])
HSP 1 Score: 407.9 bits (1047), Expect = 1.1e-109
Identity = 254/408 (62.25%), Postives = 297/408 (72.79%), Query Frame = 0
Query: 3 SDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVITIN 62
S FELKISPTR+ DPSSTFEL L K T+T F+S+ETNSMF+LTAKL GFA DDIVITIN
Sbjct: 5 SHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVITIN 64
Query: 63 GSSTQIEIGWGKPVRKMEITGRTYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILK 122
GS T+IEI WG+PV+KMEIT TYKKETETRRFKKIFRIPDGV+LDEIKATYNDE+SILK
Sbjct: 65 GSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILK 124
Query: 123 ISMPKSVDGMLGVGIEEVKEQEAGEATFESQDYEEEEL------LETLETGRKTNLVDEN 182
I MPK +G+LGVGI+EVKE+EAGEATFESQD E E + LET ETG++T L+++
Sbjct: 125 ILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDT 184
Query: 183 HEKEEDDADYGEVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSER 242
H GE ENA+ EAF K+EY AE PEEIEKLKG+EM +D DG S +DYSE
Sbjct: 185 HGN-------GEFGGENAKREAFSKMEYAAETTPEEIEKLKGNEM-EDTDGGS-NDYSEC 244
Query: 243 KQTVKVATKTTEYEATRENVNGEIKAPKVRSKEGIEVAEGTT----NHQKEK-RLDAESS 302
+Q ATK TEYE T+EN+NG+IK PKV S EGIEVAEGT+ NHQ+EK AE
Sbjct: 245 EQLETGATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQEEKGEGKAEEH 304
Query: 303 NSD-------KANVKMQSQASIDREAQVLDCELLQPNRQTRAESGKQETYKNVQELKELE 362
N D K +VK Q QASID+EAQ L+ E + NR TRAE GK ETY+N +ELK
Sbjct: 305 NGDIATMIKKKLDVKTQPQASIDQEAQTLEQENFKRNRHTRAELGKLETYRNTRELK--- 364
Query: 363 TDEEPEDIGRPYLQSPAHQHEEKGV-DHKKGRSFQTKDEIKDTREECK 392
EPEDI PYLQSPAH+HEEK + D KK ++K R+E +
Sbjct: 365 ---EPEDIEIPYLQSPAHEHEEKEISDEKKTTQSGHTTKVKTGRDEVR 397
BLAST of Lsi02G019710 vs. NCBI nr
Match:
XP_022981685.1 (uncharacterized protein LOC111480753 [Cucurbita maxima])
HSP 1 Score: 407.5 bits (1046), Expect = 1.5e-109
Identity = 249/382 (65.18%), Postives = 282/382 (73.82%), Query Frame = 0
Query: 3 SDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVITIN 62
S FELKISPTR+ DPSSTFEL L K T+T F+S+ETNSMF+LTAKL GFA DDIVITIN
Sbjct: 5 SHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVITIN 64
Query: 63 GSSTQIEIGWGKPVRKMEITGRTYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILK 122
GS TQIEI WG+PV+KMEIT TYKKETETRRFKKIFRIPDGV+LDEIKATYNDE+SILK
Sbjct: 65 GSGTQIEISWGQPVQKMEITRLTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILK 124
Query: 123 ISMPKSVDGMLGVGIEEVKEQEAGEATFESQDYEEEEL------LETLETGRKTNLVDEN 182
I MPK V+G+LGVGIE VKEQEAG+ATFESQD E E + LET ETG+KT LV++
Sbjct: 125 ILMPKLVEGILGVGIEGVKEQEAGDATFESQDSEAEAIPHAPTDLETPETGKKTKLVEDT 184
Query: 183 HEKEEDDADYGEVEEENAEPEAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSER 242
H GE ENA+ EAF KIEY AE PEEIEKLKG+EM +D DG S +DYSE
Sbjct: 185 HGN-------GEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEM-EDTDGGS-NDYSES 244
Query: 243 KQTVKVATKTTEYEATRENVNGEIKAPKVRSKEGIEVAEGTT----NHQKEKRLDAESSN 302
+Q ATK TEYE T+EN+NG+I+ PKV S EGIEVAEGT+ NHQKEK +AE N
Sbjct: 245 EQLETGATKATEYEGTKENINGQIQVPKVTSMEGIEVAEGTSQETANHQKEKEGNAEEHN 304
Query: 303 SD-------KANVKMQSQASIDREAQVLDCELLQPNRQTRAESGKQETYKNVQELKELET 362
D K +VK Q QASID+E E + NR TRA GK ETY+N +ELK
Sbjct: 305 GDMATMIKKKPDVKTQPQASIDQEQ-----ENFKQNRHTRAGLGKPETYRNTRELK---- 364
Query: 363 DEEPEDIGRPYLQSPAHQHEEK 368
EPEDI PYLQSPAH+HEEK
Sbjct: 365 --EPEDIEIPYLQSPAHEHEEK 366
BLAST of Lsi02G019710 vs. TAIR 10
Match:
AT1G76770.1 (HSP20-like chaperones superfamily protein )
HSP 1 Score: 99.8 bits (247), Expect = 6.1e-21
Identity = 80/217 (36.87%), Postives = 116/217 (53.46%), Query Frame = 0
Query: 1 MGSDFELKISPTRDGDPSSTFELQLTKGTATPFFYSNETNSMFILTAKLTGFAADDIVIT 60
M + LKI+ T+D D SS+ + ++ + + S ETNS+F L L GF D I I
Sbjct: 1 MELELGLKITRTKD-DVSSSTDFRVARDSFGHRSLSRETNSVFFLILHLKGFKKDGIDIE 60
Query: 61 INGSSTQIEIGWGKPVRKMEITGRT-YKKETETRRFKKIFRIPDGVVLDEIKATYNDEES 120
IN I+I K V +M + +KKETE + FKK+FRIPD V+LD+IKA +N+E+
Sbjct: 61 INKEGNLIKISGRKQVEEMVLVKWVEWKKETEIKEFKKVFRIPDIVILDKIKARFNEEDG 120
Query: 121 ILKISMPKSVDGMLGVGIEEVKEQEAGEATFESQDYEEEELLETLETGRKTNLVDENHEK 180
L ++MPK V G+ G+ IEE E+E + + EE+ E E +T +EN E
Sbjct: 121 TLTVTMPKKVKGITGLKIEEEDEEEEMKEPIVEEKTEEKTEPEE-EIKEETKPEEENEEA 180
Query: 181 EEDD-ADYGEVEEENAEPEAFHKIEYVAEMPPEEIEK 216
EE + EV EE K E + + P ++ K
Sbjct: 181 EEPQREEEEEVVEEGTRDHEGKKEEEIEDKPRKKRRK 215
BLAST of Lsi02G019710 vs. TAIR 10
Match:
AT1G76780.1 (HSP20-like chaperones superfamily protein )
HSP 1 Score: 57.4 bits (137), Expect = 3.5e-08
Identity = 99/345 (28.70%), Postives = 156/345 (45.22%), Query Frame = 0
Query: 86 YKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILKISMPKSVDGMLGVGIEEVKEQEA 145
++KE E FKK+FRIPD V LD+IKA ++D+++ L I+MPK V G+ G IEE +E+E
Sbjct: 9 WRKEVEFSVFKKVFRIPDTVDLDKIKARFDDDDATLTITMPKRVKGISGFKIEEEEEEEE 68
Query: 146 GEATFESQDYEEEELLETLETG-------RKTNLVDENHEKEEDDADYGE--VEEENAEP 205
E E D E E E E G K++ +DE E+E+ AD + V+ +P
Sbjct: 69 EEE--ERVDVSEAEHKEETEKGELKDDYLEKSHQIDERIEEEKGLADSNKESVDSSLRKP 128
Query: 206 EAFHKIEYVAEMPPEEIEKLKGSEMDQDIDGDSHDDYSER------KQTVKVATKTTEYE 265
E + EE E K ++ Q + D DD+ R +Q V +T+
Sbjct: 129 PDIEGRECHEQTRHEEQENNK--QLVQ-AESDDSDDFGSRAFEEIEEQESDVLDRTSTSG 188
Query: 266 ATRENVNGEIKAPKVRSKEGIEVAEGTTNHQK-EKRLDAESSNSDKANVKMQSQASIDRE 325
A + + ++ +R +GIE E K + +D E+S +K V + + D +
Sbjct: 189 AMEKEMTDDV-GDGLRKVQGIEEPERHNEESKISEMVDGETSGHEKKKVVKMDKKNRDVK 248
Query: 326 AQVLDC--ELLQPN---RQTRAESGKQETYKNVQELK--ELETDE--------------E 385
+V E +PN Q + ET KN +E + +LE DE
Sbjct: 249 EEVDGAMGEGFRPNIDRTQVVGDDEIAETEKNDEEFESDKLEADEVDKINEGGNTKVRRH 308
Query: 386 PEDIGRPYLQSPAHQHEEKGVDHKKGRSFQTKDEIKDTREECKST 394
ED LQ QH ++ H K + K+ +++ E ++T
Sbjct: 309 SEDRNLIKLQEKEEQHSKEQKGHSKEENM--KELVEEKTPEAETT 345
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CPW6 | 8.3e-119 | 59.75 | uncharacterized protein LOC111013495 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A6J1EKH3 | 5.4e-110 | 62.25 | neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111433... | [more] |
A0A6J1J0B1 | 7.1e-110 | 65.18 | uncharacterized protein LOC111480753 OS=Cucurbita maxima OX=3661 GN=LOC111480753... | [more] |
A0A5A7UWU5 | 1.7e-55 | 41.52 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CSD6 | 2.1e-53 | 54.78 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
XP_023521223.1 | 1.1e-136 | 65.52 | neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo] >XP_023522087... | [more] |
KAG6607636.1 | 3.8e-134 | 64.24 | hypothetical protein SDJN03_00978, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022143634.1 | 1.7e-118 | 59.75 | uncharacterized protein LOC111013495 [Momordica charantia] | [more] |
XP_022926215.1 | 1.1e-109 | 62.25 | neurofilament medium polypeptide-like [Cucurbita moschata] | [more] |
XP_022981685.1 | 1.5e-109 | 65.18 | uncharacterized protein LOC111480753 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT1G76770.1 | 6.1e-21 | 36.87 | HSP20-like chaperones superfamily protein | [more] |
AT1G76780.1 | 3.5e-08 | 28.70 | HSP20-like chaperones superfamily protein | [more] |