Lsi02G012620 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G012620
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein CHUP1, chloroplastic
Locationchr02: 16758515 .. 16762290 (-)
RNA-Seq ExpressionLsi02G012620
SyntenyLsi02G012620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAGAAGCAAAAAATCAAGCAAACTTTAATAGCTTGGCTTCTCCTTTAGCCCATTTATTAAAAAAAATCACAAAATCAAAGGAGAATGCCAAAGGAAGAAGATGAAATTTTGGCTATGGAGATCAATTGCTTGAAAAGAGAATTGGAAATTTCTCTACAAAAATTAAATTTTCTCGAGAAAGAAAATCAAGAACTCAGACAAGAATTGGGTCGATTGAAATCCCAGATTCAGTCTTTGAAAGCTCAAAACAATGAGAGAAAATCAATTCTCTGGAAGAAATTCCATAGCTCCATGGATGTCGCCGTCGCCGGAGCTGACTCGCCGCCGCCAAGTCCGGCTAATACGGCGAGTGATAAACGAGAGCTGACCAAATCGCAGAAACAGAGTAGTTGGGGTGATGTGAAAGAGAATCAGAGAATGATGGCAGCACCGGCATCGGCGCCGCCGCCTCCGCCGCCACTTCCGACGAAGCTGCTCGGAGGATCGAAGGCAGTGCGGCGAGTTCCGGAAGTGTTGGAGTTGTACCGTACGCTGACGAAAAGGGATGCACAGAAGGAAAACAAGGTCACACACGGCGGAGGTCCGGCGGTGGCGTTCACCAAAAACATGATCGGCGAAATTGAAAACCGATCAGCCTATCTCTCGGCAGTAAGTGTTTATAATTTACGGATATTTATGGTGTGACATTCAAAAAAAATTTAAAACAAAATTTAAATACTACATTGAATTTTATATTTGATAGTAAACTTTTAATTTAATTGAGTACGTTCATCGTTTATGAATGAATGGTTTAAAAAATCCAATATATTAGTGGTCTATTAGCGATGAATAAAATTGAAATTTTATAAATTTATCAGATGCATAATTTGAAGTTTAACCAAAATTTTAATGTTTTATAAGCAACACTTCAAATTTAGAAGAGTTTTTTTTTCTCTCTCTCTGACAAGTATGTTATATTTGGCTCAAATTTAGAGGAGTTTATACATAGAAAACCTTTTTCTAAAGGTAATGTGTTTTTTTTTTCCTTTTAATTCATCCATTTGTTCGAGTATATTACCAATAATAAAAAATTGTTGAGCATATAAATATTTTACCTACGGAAACTAATTAAATTAAAAAGTTGTAACAATTTTTAGTTTGATGTTAAATAGTTTTAAAATCCTCAAATTGACCCTTCTTCAATAAAATTAATTAGTAAAAGGATAAATTATCGTCTTATTGATATATATTTGAAGCTATGAACAAAAGAAAAGAATTTAGTTAATTAGTTTACTATTCACAACCCAATAACTTCTTTGATATATTCGGGTCGTTAGTTTGTAGTGGATCACCAAATCATGAAACTTAGCAACAACTCGCTCTATAATTAGTGATTCTCCCACCACTCGAATTTTACCGGTTAACAATTCCAACAAAGTTTTGAATTGAAAGACTTCATTGAAATTTTTTTATTTAAAATTTTAAGAGATCAAAGACATGAATAGACTAAAAGATTAGAGACGGAACACATTGCAGATAAAATCAGAGGTGGAAACACATGGGGAGTTCGTGAATTGGTTGATCAAAGAAGTGGAAGCGACAGCGCCAAGAGACATAGTAGAGGTAGAGAGGTTTGTGAAATGGCTGGATGGGAAACTAGCCTCGTTGGTGGACGAGAGAGCAGTATTGAAGCACTTCCCGCGGTGGCCAGAGGCGAAAGCAGATGCACTGCGGGAGGCAGCATTTAGCTATAGAGACCTAAAGAGCTTGGAGAGTGAAGTGTGTCTATTTAAGGACAATCTAAAAGAGGAGATGAATGTAGTGTTAAAGAAGGCTCAAGCATTGCAAGACAGGCGAGAATGTACTATCAATCTTTGTTGTGTAATGTTTGTTTTGGTAAGTTGATTTGATTGATGAATTATGAGAAGACTTTTGTTTAAAATGTGCAGGCTGGAGCAAAGTGTCAACAACATGGAGAGAACAAGGGAGTTTAATTGTAAGAAGTACCATAGTTTTCAAATCCCCTATCAGTGGATGTTCGATTCCGCATTGCCCGCTCAGGTATTTCACAGTAATATGAGCATTATAATACTAATTCTCATTTCAAAACTCCATACTTCAATCTCTAATCATGTTTAAATTAACTTTCTAAATTCTTTAAGCTCTAAGTTATAAATTTAGTCATTTAATTTAAATTTTAAGCTTTATGTTTATTTAATCTTCCAACCAAAGTTTAAAATATCAATAAAATATCGATTTCGATGGATATTTCTAAAAAAAATTTAAAATAAATTTAAATTAATAAATAAACATTTTATTATTTTCAAATAAGTAAACATATCTATTATTTATATTATATTTATATTAGTGATATTTTGATACTTATTTCTACGATATAATGAAAATATCAATTCATATCGAACCCATAAAAATGTAGAAATGTCATATCGATGAAAATTTAATACCATGCTCCCAACATAAAAAATTATAAAATATAGTCCACAAATCACTTATTACGTTTAAAAATCACAAACATACTAGGGATAAAATACAAGAATTTAGAATTCCATAAGATATACCATTCAAATTTATATATAATACATCAATTAATTCTTAATTAAATTAAAATATTCAAATTTGCCAGAATCTATAAGATACAAAATCTCAAATGTACTCATTGTTTAAAAACTTACTAGTCCATTTGACAAATTCAGGAGACAATTAGACACACACCCTTCCAAGACCAAACTCCTAATTTAAAAATAAAAATAAAAACTATTTCAGAGTTCAAATCTTAAAATAAACGCAACAAAATACTTTTAAAAACTATTAAGATTAAAAAAAACAATATAAAATTTAAAGACAAAACACGAAAATTCAAACTGAAATGAAATTAAAGTCAATTTAGGATTAATCGTGATTCGAGGCAACAACCAGATTGATAGTGAGTATTTAACCATAGGAACTAATGAATTTTCTTAGAATATAAGCCAATAATCACGTTTCAGAATTAAAATTACAATAATAGCTAATACATTACATGATTATAAAAAACTACAAATTTTACGTTAACAGTCATGCACACCAAAAATTACTCATTAAGAGAAAATCAAAACAAATCATCAGTTTCCTACATCATCAAGAATGAGACTAATAAAAAGTTCTAACTCAGCCTCTTTGGTTGCAGATGAAGTTGAGCTCATTGAGGCTAGCAAAGGAATACATGACAAGGATAACAAGAGAACTGCAATCAAACGAAACCCCACAAGCAGAAAACCTTCTCCTTCAAGGGGTTCGCTTTGCTTACAGGGTTCATCAGGTAAAGCAGAATGATTTACTAATCCAACCACATCTTTTTGACAATGGACTAACCACACAGAACCCTTTTTCAGTATGCAGGTGGTTTCGATTCAGAGGCTATACTGGCTTTTGAAGGACTGAAGAAAGCTGGGCTGAGTAGCCAAAGAAAATACGCTTCTTGATTAGAAACTTATAGGGAATGAATCTTCTTGTTGGCTGTTGCCAACTCTAATGCAGAGCAAATTCAACTAGATGTAATACAAATGCTTGAATGGGTATTCTATACATAATCAATCCTATTGCAACTTGTACAAACCATATCAAGGAAAATGGCATATCAGCATAACTAGACTTAGCTCTATCAAAAAGAGAACTAATTAAATAGATAAAACTCCAAGAGAAACCATCCAATGGGTCCTAACAAAAATATGAAGAGCTAAGTTCTCACTAGAACAAAATTTCTTTCCTTCTATAATGTGGCATTGGGATCCTACC

mRNA sequence

GCAAGAAGCAAAAAATCAAGCAAACTTTAATAGCTTGGCTTCTCCTTTAGCCCATTTATTAAAAAAAATCACAAAATCAAAGGAGAATGCCAAAGGAAGAAGATGAAATTTTGGCTATGGAGATCAATTGCTTGAAAAGAGAATTGGAAATTTCTCTACAAAAATTAAATTTTCTCGAGAAAGAAAATCAAGAACTCAGACAAGAATTGGGTCGATTGAAATCCCAGATTCAGTCTTTGAAAGCTCAAAACAATGAGAGAAAATCAATTCTCTGGAAGAAATTCCATAGCTCCATGGATGTCGCCGTCGCCGGAGCTGACTCGCCGCCGCCAAGTCCGGCTAATACGGCGAGTGATAAACGAGAGCTGACCAAATCGCAGAAACAGAGTAGTTGGGGTGATGTGAAAGAGAATCAGAGAATGATGGCAGCACCGGCATCGGCGCCGCCGCCTCCGCCGCCACTTCCGACGAAGCTGCTCGGAGGATCGAAGGCAGTGCGGCGAGTTCCGGAAGTGTTGGAGTTGTACCGTACGCTGACGAAAAGGGATGCACAGAAGGAAAACAAGGTCACACACGGCGGAGGTCCGGCGGTGGCGTTCACCAAAAACATGATCGGCGAAATTGAAAACCGATCAGCCTATCTCTCGGCAATAAAATCAGAGGTGGAAACACATGGGGAGTTCGTGAATTGGTTGATCAAAGAAGTGGAAGCGACAGCGCCAAGAGACATAGTAGAGGTAGAGAGGTTTGTGAAATGGCTGGATGGGAAACTAGCCTCGTTGGTGGACGAGAGAGCAGTATTGAAGCACTTCCCGCGGTGGCCAGAGGCGAAAGCAGATGCACTGCGGGAGGCAGCATTTAGCTATAGAGACCTAAAGAGCTTGGAGAGTGAAGTGTGTCTATTTAAGGACAATCTAAAAGAGGAGATGAATGTAGTGTTAAAGAAGGCTCAAGCATTGCAAGACAGGCGAGAATGTACTATCAATCTTTGTTGTGTAATGCTGGAGCAAAGTGTCAACAACATGGAGAGAACAAGGGAGTTTAATTGTAAGAAGTACCATAGTTTTCAAATCCCCTATCAGTGGATGTTCGATTCCGCATTGCCCGCTCAGATGAAGTTGAGCTCATTGAGGCTAGCAAAGGAATACATGACAAGGATAACAAGAGAACTGCAATCAAACGAAACCCCACAAGCAGAAAACCTTCTCCTTCAAGGGGTTCGCTTTGCTTACAGGGTTCATCAGTATGCAGGTGGTTTCGATTCAGAGGCTATACTGGCTTTTGAAGGACTGAAGAAAGCTGGGCTGAGTAGCCAAAGAAAATACGCTTCTTGATTAGAAACTTATAGGGAATGAATCTTCTTGTTGGCTGTTGCCAACTCTAATGCAGAGCAAATTCAACTAGATGTAATACAAATGCTTGAATGGGTATTCTATACATAATCAATCCTATTGCAACTTGTACAAACCATATCAAGGAAAATGGCATATCAGCATAACTAGACTTAGCTCTATCAAAAAGAGAACTAATTAAATAGATAAAACTCCAAGAGAAACCATCCAATGGGTCCTAACAAAAATATGAAGAGCTAAGTTCTCACTAGAACAAAATTTCTTTCCTTCTATAATGTGGCATTGGGATCCTACC

Coding sequence (CDS)

ATGCCAAAGGAAGAAGATGAAATTTTGGCTATGGAGATCAATTGCTTGAAAAGAGAATTGGAAATTTCTCTACAAAAATTAAATTTTCTCGAGAAAGAAAATCAAGAACTCAGACAAGAATTGGGTCGATTGAAATCCCAGATTCAGTCTTTGAAAGCTCAAAACAATGAGAGAAAATCAATTCTCTGGAAGAAATTCCATAGCTCCATGGATGTCGCCGTCGCCGGAGCTGACTCGCCGCCGCCAAGTCCGGCTAATACGGCGAGTGATAAACGAGAGCTGACCAAATCGCAGAAACAGAGTAGTTGGGGTGATGTGAAAGAGAATCAGAGAATGATGGCAGCACCGGCATCGGCGCCGCCGCCTCCGCCGCCACTTCCGACGAAGCTGCTCGGAGGATCGAAGGCAGTGCGGCGAGTTCCGGAAGTGTTGGAGTTGTACCGTACGCTGACGAAAAGGGATGCACAGAAGGAAAACAAGGTCACACACGGCGGAGGTCCGGCGGTGGCGTTCACCAAAAACATGATCGGCGAAATTGAAAACCGATCAGCCTATCTCTCGGCAATAAAATCAGAGGTGGAAACACATGGGGAGTTCGTGAATTGGTTGATCAAAGAAGTGGAAGCGACAGCGCCAAGAGACATAGTAGAGGTAGAGAGGTTTGTGAAATGGCTGGATGGGAAACTAGCCTCGTTGGTGGACGAGAGAGCAGTATTGAAGCACTTCCCGCGGTGGCCAGAGGCGAAAGCAGATGCACTGCGGGAGGCAGCATTTAGCTATAGAGACCTAAAGAGCTTGGAGAGTGAAGTGTGTCTATTTAAGGACAATCTAAAAGAGGAGATGAATGTAGTGTTAAAGAAGGCTCAAGCATTGCAAGACAGGCGAGAATGTACTATCAATCTTTGTTGTGTAATGCTGGAGCAAAGTGTCAACAACATGGAGAGAACAAGGGAGTTTAATTGTAAGAAGTACCATAGTTTTCAAATCCCCTATCAGTGGATGTTCGATTCCGCATTGCCCGCTCAGATGAAGTTGAGCTCATTGAGGCTAGCAAAGGAATACATGACAAGGATAACAAGAGAACTGCAATCAAACGAAACCCCACAAGCAGAAAACCTTCTCCTTCAAGGGGTTCGCTTTGCTTACAGGGTTCATCAGTATGCAGGTGGTTTCGATTCAGAGGCTATACTGGCTTTTGAAGGACTGAAGAAAGCTGGGCTGAGTAGCCAAAGAAAATACGCTTCTTGA

Protein sequence

MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKSILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRMMAAPASAPPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTINLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRITRELQSNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLKKAGLSSQRKYAS
Homology
BLAST of Lsi02G012620 vs. ExPASy Swiss-Prot
Match: Q9LI74 (Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.8e-64
Identity = 143/298 (47.99%), Postives = 191/298 (64.09%), Query Frame = 0

Query: 116 PASAPPPPPPLPTKL---LGGSKAVRRVPEVLELYRTLTKRDAQKE---NKVTHGGGPAV 175
           P   PPPPPP P  L    GG   V R PE++E Y++L KR+++KE   + ++ G G + 
Sbjct: 694 PGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSS 753

Query: 176 AFTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKL 235
           A   NMIGEIENRS +L A+K++VET G+FV  L  EV A++  DI ++  FV WLD +L
Sbjct: 754 AARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEEL 813

Query: 236 ASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQ 295
           + LVDERAVLKHF  WPE KADALREAAF Y+DL  LE +V  F D+        LKK  
Sbjct: 814 SFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMY 873

Query: 296 ALQDRRECTINLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLR 355
            L ++           +EQSV  + RTR+    +Y  F IP  W+ D+ +  ++KLSS++
Sbjct: 874 KLLEK-----------VEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQ 933

Query: 356 LAKEYMTRITRELQ----SNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLK 404
           LAK+YM R+  EL     S++ P  E LLLQGVRFA+RVHQ+AGGFD+E++ AFE L+
Sbjct: 934 LAKKYMKRVAYELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 979

BLAST of Lsi02G012620 vs. ExPASy TrEMBL
Match: A0A0A0LVK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532360 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 1.7e-187
Identity = 348/413 (84.26%), Postives = 368/413 (89.10%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           MPKEEDE+LAMEINCLK+ELEISLQK  FLEKENQELRQEL RL+SQIQS KAQNNERKS
Sbjct: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRMMAAPAS-A 120
           ILWKKFHSS+D++VAGADSPP SPA  A DKRE TKS KQSSW DVKE+ RM   PAS  
Sbjct: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKV HGG PAVAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE  APRDI EVERFVKWLDGKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTI 300
           K+FPRWPEAKADALREAAFSYRDLK LES+VC+F+DN KEEMNVVLK+AQALQDR     
Sbjct: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDR----- 300

Query: 301 NLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRIT 360
                 +EQSV+NMERTREFNC+KY +FQIP QWMFDSALP Q+K+S+LRLAKEYM RIT
Sbjct: 301 ------VEQSVSNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRIT 360

Query: 361 RELQSNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLKKAGLSSQRK 413
           RELQS ETPQ ENL LQG RFAYRVHQYAGGFDSE I AFEGLKKAGLSSQRK
Sbjct: 361 RELQSTETPQRENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK 402

BLAST of Lsi02G012620 vs. ExPASy TrEMBL
Match: A0A1S3C4V9 (protein CHUP1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497059 PE=4 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 1.8e-184
Identity = 347/413 (84.02%), Postives = 368/413 (89.10%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           MPKE+DE LAMEI+CLK++LEISLQK  FLE+ENQELR EL RLKSQIQSLKA NNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRMMAAPASA- 120
           ILWKKFHSSMD+AVAGADSPP +PA  A DKRE+TK  KQSSW DVKE+QRM A PASA 
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKV HGG P VAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVE  APRDI E E+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTI 300
           KHFPRWPEAKADALREAAFSYRDLKSLES+VC+F+DN KEEMNVVLK+AQALQDR     
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDR----- 300

Query: 301 NLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRIT 360
                 +EQSV+NMERTREFNCKKY +FQIP QWMFDSALP Q+KLS+LRLAKEYM RIT
Sbjct: 301 ------VEQSVSNMERTREFNCKKYQAFQIPCQWMFDSALPTQIKLSTLRLAKEYMIRIT 360

Query: 361 RELQSNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLKKAGLSSQRK 413
           REL+S ET QAENL LQGVRFAYRVHQYAGGFDSEAI AFEGLKKAGLSSQRK
Sbjct: 361 RELRSTETSQAENLFLQGVRFAYRVHQYAGGFDSEAIEAFEGLKKAGLSSQRK 402

BLAST of Lsi02G012620 vs. ExPASy TrEMBL
Match: A0A6J1K8G4 (protein CHUP1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493194 PE=4 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 1.0e-171
Identity = 329/414 (79.47%), Postives = 355/414 (85.75%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           MP EEDE LAMEI+ LKRELEISLQK NFLEKENQEL+QEL R KS +QSLK  NN+RKS
Sbjct: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRM-MAAPASA 120
           ILWKKFH+SMDVAVAG DS P SP   A+DK E T++QKQS+W  VKENQRM  AAP  A
Sbjct: 61  ILWKKFHNSMDVAVAGTDSSPQSP--PATDKWETTRTQKQSNWAVVKENQRMAAAAPTPA 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYR +TKRDAQKENK T+GG PAVAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVN LI+EVEA APRDI EVERFVKWLDG+LASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTI 300
           KHFPRWPE KADALREAAFSY+DLKSLE+EVC F++N KEE N +LK+AQALQDR     
Sbjct: 241 KHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDR----- 300

Query: 301 NLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRIT 360
                 LEQSV+N+ERTREFNC KY+ FQIP QWM DS LPAQMKLSSLRL KE M RIT
Sbjct: 301 ------LEQSVSNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRIT 360

Query: 361 RELQSNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLKKAG-LSSQRK 413
           +ELQ NETPQ ENL LQGVRFAYRVHQYAGGFDSEAI+AFEG+K+ G L SQRK
Sbjct: 361 KELQLNETPQTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 401

BLAST of Lsi02G012620 vs. ExPASy TrEMBL
Match: A0A1S3C5E9 (protein CHUP1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497059 PE=4 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.5e-170
Identity = 322/387 (83.20%), Postives = 343/387 (88.63%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           MPKE+DE LAMEI+CLK++LEISLQK  FLE+ENQELR EL RLKSQIQSLKA NNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRMMAAPASA- 120
           ILWKKFHSSMD+AVAGADSPP +PA  A DKRE+TK  KQSSW DVKE+QRM A PASA 
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKV HGG P VAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVE  APRDI E E+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTI 300
           KHFPRWPEAKADALREAAFSYRDLKSLES+VC+F+DN KEEMNVVLK+AQALQDR     
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDR----- 300

Query: 301 NLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRIT 360
                 +EQSV+NMERTREFNCKKY +FQIP QWMFDSALP Q+KLS+LRLAKEYM RIT
Sbjct: 301 ------VEQSVSNMERTREFNCKKYQAFQIPCQWMFDSALPTQIKLSTLRLAKEYMIRIT 360

Query: 361 RELQSNETPQAENLLLQGVRFAYRVHQ 387
           REL+S ET QAENL LQGVRFAYRVHQ
Sbjct: 361 RELRSTETSQAENLFLQGVRFAYRVHQ 376

BLAST of Lsi02G012620 vs. ExPASy TrEMBL
Match: A0A6J1G8X0 (protein CHUP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452021 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 3.4e-167
Identity = 325/414 (78.50%), Postives = 350/414 (84.54%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           MP EEDE LAMEI+ LKRELEISLQK  FLEKENQEL+QEL R KS I SLKA NN+RKS
Sbjct: 1   MPMEEDEELAMEIHALKRELEISLQKSIFLEKENQELKQELARFKSHIHSLKAHNNDRKS 60

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRM-MAAPASA 120
           ILWKKFH+SMD  VAG DS P SP   A+DK E T++QKQS+W  VKENQRM  AAP  A
Sbjct: 61  ILWKKFHNSMD--VAGNDSTPQSP--PATDKWETTRTQKQSNWAVVKENQRMAAAAPTPA 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYR +TKRDAQKENK  +GG PAVAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKAANGGFPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVN LI+EVEA APRDI EVERFVKWLDG+LASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTI 300
           KHFPRWPE KADALREAAFSY+DLKSLE EVC F++N KEE N +LK+AQALQDR     
Sbjct: 241 KHFPRWPEGKADALREAAFSYKDLKSLEGEVCSFRENPKEETNAMLKRAQALQDR----- 300

Query: 301 NLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRIT 360
                 LEQSV+N+ERTREFNCKKY+ FQIP QWM DS LPAQMKLSSLRL KE M RIT
Sbjct: 301 ------LEQSVSNVERTREFNCKKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRIT 360

Query: 361 RELQSNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLKKAGLS-SQRK 413
           +E Q NETPQ ENL LQGVRFAYRVHQYAGGFDSEAI+AFEG+K+ GL  +QRK
Sbjct: 361 KEKQLNETPQTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLQLNQRK 399

BLAST of Lsi02G012620 vs. NCBI nr
Match: XP_038896069.1 (protein CHUP1, chloroplastic [Benincasa hispida])

HSP 1 Score: 667.2 bits (1720), Expect = 9.5e-188
Identity = 352/412 (85.44%), Postives = 368/412 (89.32%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           MPKEEDE LAMEIN LK+ELEISLQK NFLE ENQELRQELGRLKSQIQSLKA NNERKS
Sbjct: 1   MPKEEDEELAMEINYLKKELEISLQKSNFLENENQELRQELGRLKSQIQSLKAHNNERKS 60

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRMMAAPASAP 120
           ILWKKFHSSMDVAVAGADS PPSPA  A +KRE TKSQKQSSWGDVKENQRMM APA AP
Sbjct: 61  ILWKKFHSSMDVAVAGADSRPPSPAAAAGEKRETTKSQKQSSWGDVKENQRMMVAPALAP 120

Query: 121 PPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEIE 180
           PPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENK THGG P VAFTKNMIGEIE
Sbjct: 121 PPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKATHGGVPTVAFTKNMIGEIE 180

Query: 181 NRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVLK 240
           NRSAYLSAIKSEVETHGEFVNWLIKEVEA APRDI EVERFVKW+D KL SLVDERAVLK
Sbjct: 181 NRSAYLSAIKSEVETHGEFVNWLIKEVEAAAPRDISEVERFVKWVDVKLGSLVDERAVLK 240

Query: 241 HFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTIN 300
           HFPRWPEAKADALREAAFSYRDLK LE+EVC+F+DN KEE+NVVLK+AQALQDR      
Sbjct: 241 HFPRWPEAKADALREAAFSYRDLKRLENEVCMFRDNAKEEVNVVLKRAQALQDR------ 300

Query: 301 LCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRITR 360
                +EQSV+N+E+TREFN KKY  FQIP QWMFDSALPAQMKLSSLRL KE M RITR
Sbjct: 301 -----VEQSVSNLEKTREFNSKKYQRFQIPSQWMFDSALPAQMKLSSLRLGKECMLRITR 360

Query: 361 ELQSNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLKKAGLSSQRK 413
           E++S ETPQAENL LQGVRFAYRVHQ+AGGFDSEA + FE LKKAGLSSQRK
Sbjct: 361 EIRSIETPQAENLFLQGVRFAYRVHQFAGGFDSEATVVFEELKKAGLSSQRK 401

BLAST of Lsi02G012620 vs. NCBI nr
Match: XP_011658693.1 (protein CHUP1, chloroplastic isoform X1 [Cucumis sativus] >KGN65828.1 hypothetical protein Csa_023225 [Cucumis sativus])

HSP 1 Score: 665.2 bits (1715), Expect = 3.6e-187
Identity = 348/413 (84.26%), Postives = 368/413 (89.10%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           MPKEEDE+LAMEINCLK+ELEISLQK  FLEKENQELRQEL RL+SQIQS KAQNNERKS
Sbjct: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRMMAAPAS-A 120
           ILWKKFHSS+D++VAGADSPP SPA  A DKRE TKS KQSSW DVKE+ RM   PAS  
Sbjct: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKV HGG PAVAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE  APRDI EVERFVKWLDGKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTI 300
           K+FPRWPEAKADALREAAFSYRDLK LES+VC+F+DN KEEMNVVLK+AQALQDR     
Sbjct: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDR----- 300

Query: 301 NLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRIT 360
                 +EQSV+NMERTREFNC+KY +FQIP QWMFDSALP Q+K+S+LRLAKEYM RIT
Sbjct: 301 ------VEQSVSNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRIT 360

Query: 361 RELQSNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLKKAGLSSQRK 413
           RELQS ETPQ ENL LQG RFAYRVHQYAGGFDSE I AFEGLKKAGLSSQRK
Sbjct: 361 RELQSTETPQRENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK 402

BLAST of Lsi02G012620 vs. NCBI nr
Match: XP_008457349.1 (PREDICTED: protein CHUP1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 655.2 bits (1689), Expect = 3.7e-184
Identity = 347/413 (84.02%), Postives = 368/413 (89.10%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           MPKE+DE LAMEI+CLK++LEISLQK  FLE+ENQELR EL RLKSQIQSLKA NNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRMMAAPASA- 120
           ILWKKFHSSMD+AVAGADSPP +PA  A DKRE+TK  KQSSW DVKE+QRM A PASA 
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKV HGG P VAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVE  APRDI E E+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTI 300
           KHFPRWPEAKADALREAAFSYRDLKSLES+VC+F+DN KEEMNVVLK+AQALQDR     
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDR----- 300

Query: 301 NLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRIT 360
                 +EQSV+NMERTREFNCKKY +FQIP QWMFDSALP Q+KLS+LRLAKEYM RIT
Sbjct: 301 ------VEQSVSNMERTREFNCKKYQAFQIPCQWMFDSALPTQIKLSTLRLAKEYMIRIT 360

Query: 361 RELQSNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLKKAGLSSQRK 413
           REL+S ET QAENL LQGVRFAYRVHQYAGGFDSEAI AFEGLKKAGLSSQRK
Sbjct: 361 RELRSTETSQAENLFLQGVRFAYRVHQYAGGFDSEAIEAFEGLKKAGLSSQRK 402

BLAST of Lsi02G012620 vs. NCBI nr
Match: XP_011658695.1 (protein CHUP1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 620.5 bits (1599), Expect = 1.0e-173
Identity = 324/387 (83.72%), Postives = 344/387 (88.89%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           MPKEEDE+LAMEINCLK+ELEISLQK  FLEKENQELRQEL RL+SQIQS KAQNNERKS
Sbjct: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRMMAAPAS-A 120
           ILWKKFHSS+D++VAGADSPP SPA  A DKRE TKS KQSSW DVKE+ RM   PAS  
Sbjct: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKV HGG PAVAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE  APRDI EVERFVKWLDGKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTI 300
           K+FPRWPEAKADALREAAFSYRDLK LES+VC+F+DN KEEMNVVLK+AQALQDR     
Sbjct: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDR----- 300

Query: 301 NLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRIT 360
                 +EQSV+NMERTREFNC+KY +FQIP QWMFDSALP Q+K+S+LRLAKEYM RIT
Sbjct: 301 ------VEQSVSNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRIT 360

Query: 361 RELQSNETPQAENLLLQGVRFAYRVHQ 387
           RELQS ETPQ ENL LQG RFAYRVHQ
Sbjct: 361 RELQSTETPQRENLFLQGARFAYRVHQ 376

BLAST of Lsi02G012620 vs. NCBI nr
Match: XP_023523072.1 (protein CHUP1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523080.1 protein CHUP1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 612.8 bits (1579), Expect = 2.1e-171
Identity = 328/414 (79.23%), Postives = 355/414 (85.75%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           MP EEDE LAMEI+ LKRELEISLQK NFLEKENQEL+QEL R KS IQSLKA NN+RKS
Sbjct: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHIQSLKAHNNDRKS 60

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQRM-MAAPASA 120
           ILWKKFH+SMDVAVAG DS P SP   A+DK E T++QKQS+W  VKENQRM  AAP  A
Sbjct: 61  ILWKKFHNSMDVAVAGTDSSPQSP--PATDKWETTRTQKQSNWAVVKENQRMAAAAPTPA 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYR +TKRDAQKENK  +GG PAVAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKAANGGFPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVN LI+EVEA APRDI EVERFVKWLDG+L SLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELGSLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRRECTI 300
           KHFPRWPE KADALREAAFSY+DLKSLE+EVC F++N KEE N +LK+AQALQDR     
Sbjct: 241 KHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDR----- 300

Query: 301 NLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYMTRIT 360
                 LEQSV+N+ERTREFNCKKY+ FQIP QWM DS LPAQMKLSSLRL KE M RIT
Sbjct: 301 ------LEQSVSNVERTREFNCKKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRIT 360

Query: 361 RELQSNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLKKAGLS-SQRK 413
           +E+Q NETPQ ENL LQGVRFAYRVHQYAGGFDSEAI+AFEG+K+ GL  +QRK
Sbjct: 361 KEIQLNETPQTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLQLNQRK 401

BLAST of Lsi02G012620 vs. TAIR 10
Match: AT1G07120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1); Has 288 Blast hits to 260 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 27; Fungi - 15; Plants - 163; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 348.2 bits (892), Expect = 9.1e-96
Identity = 197/409 (48.17%), Postives = 266/409 (65.04%), Query Frame = 0

Query: 1   MPKEEDEILAMEINCLKRELEISLQKLNFLEKENQELRQELGRLKSQIQSLKAQNNERKS 60
           +P  ED+    ++  L +EL+  L + + LEKEN ELRQE+ RL++Q+ +LK+  NERKS
Sbjct: 2   LPNGEDD---SDLLRLVKELQAYLVRNDKLEKENHELRQEVARLRAQVSNLKSHENERKS 61

Query: 61  ILWKKFHSSMDVAVAGADSPPPSPANTASDKRELTKSQKQSSWGDVKENQR-----MMAA 120
           +LWKK  SS D             +NT     +  +S K ++ G    N          +
Sbjct: 62  MLWKKLQSSYD------------GSNTDGSNLKAPESVKSNTKGQEVRNPNPKPTIQGQS 121

Query: 121 PASAPPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVAFTKNM 180
            A+ PPPPPPLP+K   G ++VRR PEV+E YR LTKR++   NK+   G  + AF +NM
Sbjct: 122 TATKPPPPPPLPSKRTLGKRSVRRAPEVVEFYRALTKRESHMGNKINQNGVLSPAFNRNM 181

Query: 181 IGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKLASLVDE 240
           IGEIENRS YLS IKS+ + H + ++ LI +VEA    DI EVE FVKW+D +L+SLVDE
Sbjct: 182 IGEIENRSKYLSDIKSDTDRHRDHIHILISKVEAATFTDISEVETFVKWIDEELSSLVDE 241

Query: 241 RAVLKHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQALQDRR 300
           RAVLKHFP+WPE K D+LREAA +Y+  K+L +E+  FKDN K+ +   L++ Q+LQDR 
Sbjct: 242 RAVLKHFPKWPERKVDSLREAACNYKRPKNLGNEILSFKDNPKDSLTQALQRIQSLQDR- 301

Query: 301 ECTINLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLRLAKEYM 360
                     LE+SVNN E+ R+   K+Y  FQIP++WM D+ L  Q+K SSLRLA+EYM
Sbjct: 302 ----------LEESVNNTEKMRDSTGKRYKDFQIPWEWMLDTGLIGQLKYSSLRLAQEYM 361

Query: 361 TRITRELQSNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLKK 405
            RI +EL+SN + +  NL+LQGVRFAY +HQ+AGGFD E +  F  LKK
Sbjct: 362 KRIAKELESNGSGKEGNLMLQGVRFAYTIHQFAGGFDGETLSIFHELKK 384

BLAST of Lsi02G012620 vs. TAIR 10
Match: AT4G18570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 264.2 bits (674), Expect = 1.7e-70
Identity = 149/296 (50.34%), Postives = 197/296 (66.55%), Query Frame = 0

Query: 117 ASAPPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVTHGGGPAVA------ 176
           A  PPPPPP P  L   S  VRRVPEV+E Y +L +RD+    + + GGG A A      
Sbjct: 333 APPPPPPPPPPKSLSIASAKVRRVPEVVEFYHSLMRRDSTNSRRDSTGGGNAAAEAILAN 392

Query: 177 -FTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKL 236
              ++MIGEIENRS YL AIK++VET G+F+ +LIKEV   A  DI +V  FVKWLD +L
Sbjct: 393 SNARDMIGEIENRSVYLLAIKTDVETQGDFIRFLIKEVGNAAFSDIEDVVPFVKWLDDEL 452

Query: 237 ASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQ 296
           + LVDERAVLKHF  WPE KADALREAAF Y DLK L SE   F+++ ++  +  LKK Q
Sbjct: 453 SYLVDERAVLKHF-EWPEQKADALREAAFCYFDLKKLISEASRFREDPRQSSSSALKKMQ 512

Query: 297 ALQDRRECTINLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLR 356
           AL ++           LE  V ++ R RE    K+ SFQIP  WM ++ + +Q+KL+S++
Sbjct: 513 ALFEK-----------LEHGVYSLSRMRESAATKFKSFQIPVDWMLETGITSQIKLASVK 572

Query: 357 LAKEYMTRITRELQSNE--TPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLK 404
           LA +YM R++ EL++ E   P+ E L++QGVRFA+RVHQ+AGGFD+E + AFE L+
Sbjct: 573 LAMKYMKRVSAELEAIEGGGPEEEELIVQGVRFAFRVHQFAGGFDAETMKAFEELR 616

BLAST of Lsi02G012620 vs. TAIR 10
Match: AT3G25690.1 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-65
Identity = 143/298 (47.99%), Postives = 191/298 (64.09%), Query Frame = 0

Query: 116 PASAPPPPPPLPTKL---LGGSKAVRRVPEVLELYRTLTKRDAQKE---NKVTHGGGPAV 175
           P   PPPPPP P  L    GG   V R PE++E Y++L KR+++KE   + ++ G G + 
Sbjct: 694 PGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSS 753

Query: 176 AFTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKL 235
           A   NMIGEIENRS +L A+K++VET G+FV  L  EV A++  DI ++  FV WLD +L
Sbjct: 754 AARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEEL 813

Query: 236 ASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQ 295
           + LVDERAVLKHF  WPE KADALREAAF Y+DL  LE +V  F D+        LKK  
Sbjct: 814 SFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMY 873

Query: 296 ALQDRRECTINLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLR 355
            L ++           +EQSV  + RTR+    +Y  F IP  W+ D+ +  ++KLSS++
Sbjct: 874 KLLEK-----------VEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQ 933

Query: 356 LAKEYMTRITRELQ----SNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLK 404
           LAK+YM R+  EL     S++ P  E LLLQGVRFA+RVHQ+AGGFD+E++ AFE L+
Sbjct: 934 LAKKYMKRVAYELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 979

BLAST of Lsi02G012620 vs. TAIR 10
Match: AT3G25690.2 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-65
Identity = 143/298 (47.99%), Postives = 191/298 (64.09%), Query Frame = 0

Query: 116 PASAPPPPPPLPTKL---LGGSKAVRRVPEVLELYRTLTKRDAQKE---NKVTHGGGPAV 175
           P   PPPPPP P  L    GG   V R PE++E Y++L KR+++KE   + ++ G G + 
Sbjct: 694 PGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSS 753

Query: 176 AFTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKL 235
           A   NMIGEIENRS +L A+K++VET G+FV  L  EV A++  DI ++  FV WLD +L
Sbjct: 754 AARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEEL 813

Query: 236 ASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQ 295
           + LVDERAVLKHF  WPE KADALREAAF Y+DL  LE +V  F D+        LKK  
Sbjct: 814 SFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMY 873

Query: 296 ALQDRRECTINLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLR 355
            L ++           +EQSV  + RTR+    +Y  F IP  W+ D+ +  ++KLSS++
Sbjct: 874 KLLEK-----------VEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQ 933

Query: 356 LAKEYMTRITRELQ----SNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLK 404
           LAK+YM R+  EL     S++ P  E LLLQGVRFA+RVHQ+AGGFD+E++ AFE L+
Sbjct: 934 LAKKYMKRVAYELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 979

BLAST of Lsi02G012620 vs. TAIR 10
Match: AT3G25690.3 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-65
Identity = 143/298 (47.99%), Postives = 191/298 (64.09%), Query Frame = 0

Query: 116 PASAPPPPPPLPTKL---LGGSKAVRRVPEVLELYRTLTKRDAQKE---NKVTHGGGPAV 175
           P   PPPPPP P  L    GG   V R PE++E Y++L KR+++KE   + ++ G G + 
Sbjct: 553 PGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSS 612

Query: 176 AFTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEATAPRDIVEVERFVKWLDGKL 235
           A   NMIGEIENRS +L A+K++VET G+FV  L  EV A++  DI ++  FV WLD +L
Sbjct: 613 AARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEEL 672

Query: 236 ASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESEVCLFKDNLKEEMNVVLKKAQ 295
           + LVDERAVLKHF  WPE KADALREAAF Y+DL  LE +V  F D+        LKK  
Sbjct: 673 SFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMY 732

Query: 296 ALQDRRECTINLCCVMLEQSVNNMERTREFNCKKYHSFQIPYQWMFDSALPAQMKLSSLR 355
            L ++           +EQSV  + RTR+    +Y  F IP  W+ D+ +  ++KLSS++
Sbjct: 733 KLLEK-----------VEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQ 792

Query: 356 LAKEYMTRITRELQ----SNETPQAENLLLQGVRFAYRVHQYAGGFDSEAILAFEGLK 404
           LAK+YM R+  EL     S++ P  E LLLQGVRFA+RVHQ+AGGFD+E++ AFE L+
Sbjct: 793 LAKKYMKRVAYELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 838

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LI741.8e-6447.99Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LVK71.7e-18784.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532360 PE=4 SV=1[more]
A0A1S3C4V91.8e-18484.02protein CHUP1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497059 ... [more]
A0A6J1K8G41.0e-17179.47protein CHUP1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493194 PE=4 SV... [more]
A0A1S3C5E91.5e-17083.20protein CHUP1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497059 ... [more]
A0A6J1G8X03.4e-16778.50protein CHUP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452021 PE=4 ... [more]
Match NameE-valueIdentityDescription
XP_038896069.19.5e-18885.44protein CHUP1, chloroplastic [Benincasa hispida][more]
XP_011658693.13.6e-18784.26protein CHUP1, chloroplastic isoform X1 [Cucumis sativus] >KGN65828.1 hypothetic... [more]
XP_008457349.13.7e-18484.02PREDICTED: protein CHUP1, chloroplastic isoform X1 [Cucumis melo][more]
XP_011658695.11.0e-17383.72protein CHUP1, chloroplastic isoform X2 [Cucumis sativus][more]
XP_023523072.12.1e-17179.23protein CHUP1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_0235230... [more]
Match NameE-valueIdentityDescription
AT1G07120.19.1e-9648.17FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT4G18570.11.7e-7050.34Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G25690.11.3e-6547.99Hydroxyproline-rich glycoprotein family protein [more]
AT3G25690.21.3e-6547.99Hydroxyproline-rich glycoprotein family protein [more]
AT3G25690.31.3e-6547.99Hydroxyproline-rich glycoprotein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..54
NoneNo IPR availableCOILSCoilCoilcoord: 274..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..106
NoneNo IPR availablePANTHERPTHR31342:SF48CHUP1-LIKE PROTEINcoord: 6..406
IPR040265Protein CHUP1-likePANTHERPTHR31342PROTEIN CHUP1, CHLOROPLASTICcoord: 6..406

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G012620.1Lsi02G012620.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
cellular_component GO:0009707 chloroplast outer membrane