Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTCCAATTATGAGACTCCCTGCCAAGAAGTAACCTTCTGAAAAGGGGGGATCACACCTGTAATTCGGCATTCCACGCATCTTTAACAGAAATCAAAGTGTTGCTAGTTAAGTTGAAGAATCTAGGATGAGCGTCTTTCAGTTTATTCCCCTGAATCCAACGATGATGCCAGAAACAGGGTATTACCACCATTCTTGATATTCCACTGGATCTTGCTGCAAATGACGTCTTTTAATTTTGAAATATTGAACCAGGGAGCTTTAGCACTGACGAATTTACATTTGTTAGGCACTTTGCCAATATCTTCAGGATTATATTTACCATCGATCAGAGATCTCCATAGCTGTTCAGGTTCATTTAAGTACCGCCAAATAAATCAAAATGCATTTAGTAGATTGATTAAATGCATTTTGATTTATTTTTTTCTCTGAAACTTGATTTATTTAGATGTATGTTTGTGTATGGATTAACCCCCTTACCCACGAATGTAGGTCTTACCTATAGATTTGGCTTGCACGTTACCTTCTTGTTCGTCTAGCTTAAATCATACAAGTAGCAAAAGGTTGATTTCATGTATGCTAAGGAATATAAATTGCACGTAGACTTTAAATGCATGTTCAATCTAGGTTCAAAGATAAGATTCTATCACGGTCTATCATTGATAGACAGTGAAATTTTTCTATATTTATAAATATTTCGATATTTTATTTGAGAAAATTAATATAAACAGAAAAAATATCAAACTATTTACAAATATAGAAAAATAATACTGTTTATCAACGATAGACTACGATAGATTTCTATCGCTTGACATATAGAGTTCTATCATTATTTATCGCTCAAGTGATAGAATTCTATCACAGTCATTCGCTGATAGACAATAAAATTTTTCTATATCTATAAATAGTTTAACTTTTTTTTCTATATTTGAAAACGTCCTTTTTATCTATTTATAGTAATTTTTCCTTTTTTTATCCATTACAATTTCTCTTTCTAAAATACAAATCTTGTGGACTGTTATGATTGTTTAGATTGTTGTTCTATTATTGACGGAGGTGTTTTATATTTGTCTTTTTGTTATTCTTATTTTTTTATATATATAATTTAAAAACTTGTATGAGTCTTTTTTTTTTTTTCTTTTCTTTTATTTTATTGAGTACTAGACTTGTATTAGATTGCAATTGTTATCATTAGATATTTGAATAAAATAGACGATTGCCAGCCTTATTGTTCTGTCCCTACTTTTCTTTCTTCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCCCCCCCCCCCGTTTTTGTTAAGGGTTCTGTCATACTAATTAATATATATTATCTCCTAATCGTAATTTTTATTTTTTATTTTGAAAGTTATATTTTTTAAAATGAGTCAATTTATTTATAAATATAGTAAAATATCACTTTCTATTAGTGATAAACACGGCTAGACATCTATCAGCGTCTATTACTGTCAACTTATTTTTGAAACCATATTTTAAAAATATTTTTGAAGCCGAAAATGAGTCAACTAATAAACATCTATCAGTGTCTATCACTGTCAACTTATTTTTACTTTTACTTTCGAAACCATATTTTTAACTCGAAAATGAGTTAACTTATTTACAAATATAACAAAATGTCACTATCTAATATTAGTGATATATACTGATAGACATCTATCAACGTTTATAACTGTCACTAATAGATGTCTATCACTAACATTTTGTTATATTTGAAAATATTTTCAGCAGTTTTACCATTTAAAACAATTATTCGCGATAGATGTCTATCACTATCAACTTTTATTTTATTTTAGGTCTGTTTTCAAATATAGGAAAATGAACCAAAATATTTATAAATATAACAAAATTTCATTGTCTATCCGCGATAGACCATGATAGACTACTATCTGTGTCTATCTGTAGTCTATCTCGACACAGATAGTAGTCTATCGCGATCTAGACAGTAAAATTTAGTTACATTTATAGATATTTTCAACAGTTTTGTCATTTAAAATAATTTTCCTTAGAATATTCGATAAAATAATGTTAAATAACATTTTATTTAAAAAATATGTTATATGAGATTTAGCTATAATGACCCAAGCAAATGTACTATATTAATTATATAGAAATTTTCATAGATAGAAAAAATGTCATACTATTTATAGAAAATAGCAAAAAAAATACTGATAGACATTGATAGACTTTTATCAGCATCTATCAGTGATAGACTTCTATCATTTCTATCACTGATAGACCATGATAGACTTATATCAGCGTCTATCACAACTATAAAAAATTTTGCTATTTTGTTTAAATAGTTTTTCTCATTTTTCTATTTTTAAAAACTCTCCTTAATTATAGTGAGTCATTTTAATTATAATTTCATTCTTCTTGTCATTTTAAGAAAGAATCGTCACAAATATAGCAATCAAATTCAAAGAATTAGTATATATAACAATATTTTTAAAAAATTGCAAATATACCAAAGTCTATCAGTGATAAACTTCTATCCCGAATAGACTCTTATAGTCTAATGATCCAAAATATCGCCTAGCCCCCACCCAATTAACCACATTCACAAGATCAACACTATCAAATTCCACAACAGAAGGACCTGATCAGCAAAACCAAACAAGCCTTCAACAATAACGAGAGGGAGCTTGAAGGTTATTGATATGTCTTATTTACACCTAACCTTAATTAGATAAACATGAATTTCAGAAAGAATATTAAATATAAAAATAAATGGATTATTATAAAAGGTATGAAAATGTCAACTCTAGGTGGCGTCAGAGGGTTTTGTTAGGGGTAACTAGAGTAGGCTTGAGCGTTTGACTTTGCCCAAATAGAAGACCCTACATTATATTTATTTCCCATGTGAACAGAAATAATTGGGAGATTGCAATTCTGAAACTTGAGGTACCTAAATTATTGTTCATTCTCCAGAGAATTGAAAGGATAGAAATGGAGGGAAGAGGAATTCTGAGCCCACAAAGATCCCGATTTTCTCCAAAAGTTTACAAAGTGGGTACTCCAGAGCCAAAAATACCGACCAGGAAAGTTCCATCCAAGAAAACAGATAAATCAAAACAAAAACTGGTTCCAAAAACTGCGACTTTACCCTCCTCAAGGCTAAAGCCACCAGCACCATCCACAAATCCTAATCCTAACGACAATAAAAGTAATTTCAATTATGAACCACCTTTCCCAGTTCCAGTTCCAACTCAACCCACCCTGCCTTCGCCTTCTTCAAAGACCAATATTGTAAGAGATTATGGTGCGCCTCCTAATTTTGCGTATTCTCCAAATGGTTCTCCCAAGATTTCGCCCACCTCTGCCTTGGGTCCTACAAAAGATCTCAACACTGTTAATGATCTTAGTGATCATTTGTTACAACGCCTTTCTTTTGACGGTAAGCTTTCTTAATACTTCAAACATTTTCTTTTTCATTTTCATGCAAATTTTTCATTATTTACTGCACACGAAAAATTTCATGAATACTGTGTAGTACTGTGACAATAATGTGGGTCCATGAAATAAATTAATAATGTTGACATAATGTGAGTAGTAGATAATACGATAGTACTAAAACTTTTTTCGAATTTAAAGTCACAGTCTCTTACGAGTGAAATTGTAAATTTGCATAAGATCTAGGAAATAATTATCATTATTTATTTTTATTTTTTTTGAAAAAATTACATATTAGTAGTACTCAAAATATAAATTTAGTCATCCAAACTTTTGAAAGTTTTTAAAAGTTTAAGCTAGGTTGTATTAGATATGTCAAAGTAAGGTTAGCTCGAAGTTTTGACTTTCCATCTTCGTAGTTGTTGTATTATAAAAATTGTATTAGGCGTAAAATTAAAATTTATATTTAATGGTTAACATGAATATCTTACTAATTTGTTTATTTATATCAAAATTGGTGAAAATAGTAGTGATTTAAAATTTTAATAATAACTAAAAATTTATTAATGAAAACAAAATGATAAAAGAAAGGAATGAAAGAAGGGAGAGGTGAAAACAGAATAAGAGATATAAAAAATGAAAACAAAATGAAAAGGATAATTGAATATTAAAATAAAAAATTAATTTAAAAAGATATAGGTAGGGAGAGAAAAAGAGGAGAGATGGGGCGAGAGAAAAGATGGGTTTGAAAGGAGAAGACCGAGGAGAGAGAAATATGGGTGCATGTATGGGAATGGAAAAAAATAGAAACACAATTTTAAAAAGTTACTGGCCCGTTTTATAATCATTTTATTTTTTATTTTTGTTTTTAAAAATTAAGTTTATAAACACTACTTTCACCTTCAGATTTATTCATTTGTTATCTACTTTTTACCAACGGTTTTAAAAACCAAATAAAAATTTGAAAACTAAAAAAACTAGCTTTTAAAAACTTGTTTTTGTTTTTAAATTTGACAAAGAATTCAACTATTGTAATTAGGAAGAGATGCAAATCAAGGTAAGAAATAGGTAGGACATAGCTTAATTTTCACAAACAAAAATAGAAAAACAAAATACTTATCAAACTAAGGCCTATACTTTTTAATTTGTCAGATTTGACATATTTTTAGAGACATTTTTTTAAATTTAAAAACAATAAAAACTAATGGTTATTAAACATCTGCTTCTACCAAAATGAGAAACAAAGTTATGATTCTGTAGCCTTATTCTACCTTCCTTATTTACTCTAGTTATTATATGAATCAACTTCAAGTTATAGTTCTAGTTTTTTCATTTCAAATCAGATATCACAAAGAAAACACAGAATTTTTTATATTCCTTTAAGTCGTTATAGTTGTGTTTTAAATCTTGTACCCTTAAAAAAAAAAAAAAAAAAATCACATGTGTAGGTAAAGATCTTGCGGACATCCTCCAAGGAAAGTCGATATATGATTTAATCAGCCCAAAAAAAAAGGAAGAATCTTCTTCTCAAAGCATTGATGGTTGGAGAGTATTTCAAAATTTGAAGGAAATTGCAGCTCATCGGCAAGAAAACTTATCCGTTGAATTTTACTTCAGAAAACTCAAGGCACTATGGGATGAACTTGCATTCAACAGTATTGATTTGGTTCAATGTTCCAGTGGTGGTGCACTGGAAAATCTGGGCAAGCTTACAGAGAGAGAAAAACTTGTGCAATTTCTTATGGGACTAAATGATTCTTATGCCACAATTTGCAGTCAAATCCTTGTTATGACCCCATTTCCAACGGTGGAAGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGTTGCATTAGAAACTGTGGCGGCAAAAGTAATCCAAAGCAATTGGCTTCTTAGAAATCAGAGTAGTCGATCCAAAAACGGTGATAATAATCTTGGAATTGATCAAGAAGTTGATAATTCTAACCTTGGATCTCCTATGTGA
mRNA sequence
ATGGTAAATAATTGGGAGATTGCAATTCTGAAACTTGAGGTACCTAAATTATTGTTCATTCTCCAGAGAATTGAAAGGATAGAAATGGAGGGAAGAGGAATTCTGAGCCCACAAAGATCCCGATTTTCTCCAAAAGTTTACAAAGTGGGTACTCCAGAGCCAAAAATACCGACCAGGAAAGTTCCATCCAAGAAAACAGATAAATCAAAACAAAAACTGGTTCCAAAAACTGCGACTTTACCCTCCTCAAGGCTAAAGCCACCAGCACCATCCACAAATCCTAATCCTAACGACAATAAAAGTAATTTCAATTATGAACCACCTTTCCCAGTTCCAGTTCCAACTCAACCCACCCTGCCTTCGCCTTCTTCAAAGACCAATATTGTAAGAGATTATGGTGCGCCTCCTAATTTTGCGTATTCTCCAAATGGTTCTCCCAAGATTTCGCCCACCTCTGCCTTGGGTCCTACAAAAGATCTCAACACTGTTAATGATCTTAGTGATCATTTGTTACAACGCCTTTCTTTTGACGGTAAAGATCTTGCGGACATCCTCCAAGGAAAGTCGATATATGATTTAATCAGCCCAAAAAAAAAGGAAGAATCTTCTTCTCAAAGCATTGATGGTTGGAGAGTATTTCAAAATTTGAAGGAAATTGCAGCTCATCGGCAAGAAAACTTATCCGTTGAATTTTACTTCAGAAAACTCAAGGCACTATGGGATGAACTTGCATTCAACAGTATTGATTTGGTTCAATGTTCCAGTGGTGGTGCACTGGAAAATCTGGGCAAGCTTACAGAGAGAGAAAAACTTGTGCAATTTCTTATGGGACTAAATGATTCTTATGCCACAATTTGCAGTCAAATCCTTGTTATGACCCCATTTCCAACGGTGGAAGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGTTGCATTAGAAACTGTGGCGGCAAAAGTAATCCAAAGCAATTGGCTTCTTAGAAATCAGAGTAGTCGATCCAAAAACGGTGATAATAATCTTGGAATTGATCAAGAAGTTGATAATTCTAACCTTGGATCTCCTATGTGA
Coding sequence (CDS)
ATGGTAAATAATTGGGAGATTGCAATTCTGAAACTTGAGGTACCTAAATTATTGTTCATTCTCCAGAGAATTGAAAGGATAGAAATGGAGGGAAGAGGAATTCTGAGCCCACAAAGATCCCGATTTTCTCCAAAAGTTTACAAAGTGGGTACTCCAGAGCCAAAAATACCGACCAGGAAAGTTCCATCCAAGAAAACAGATAAATCAAAACAAAAACTGGTTCCAAAAACTGCGACTTTACCCTCCTCAAGGCTAAAGCCACCAGCACCATCCACAAATCCTAATCCTAACGACAATAAAAGTAATTTCAATTATGAACCACCTTTCCCAGTTCCAGTTCCAACTCAACCCACCCTGCCTTCGCCTTCTTCAAAGACCAATATTGTAAGAGATTATGGTGCGCCTCCTAATTTTGCGTATTCTCCAAATGGTTCTCCCAAGATTTCGCCCACCTCTGCCTTGGGTCCTACAAAAGATCTCAACACTGTTAATGATCTTAGTGATCATTTGTTACAACGCCTTTCTTTTGACGGTAAAGATCTTGCGGACATCCTCCAAGGAAAGTCGATATATGATTTAATCAGCCCAAAAAAAAAGGAAGAATCTTCTTCTCAAAGCATTGATGGTTGGAGAGTATTTCAAAATTTGAAGGAAATTGCAGCTCATCGGCAAGAAAACTTATCCGTTGAATTTTACTTCAGAAAACTCAAGGCACTATGGGATGAACTTGCATTCAACAGTATTGATTTGGTTCAATGTTCCAGTGGTGGTGCACTGGAAAATCTGGGCAAGCTTACAGAGAGAGAAAAACTTGTGCAATTTCTTATGGGACTAAATGATTCTTATGCCACAATTTGCAGTCAAATCCTTGTTATGACCCCATTTCCAACGGTGGAAGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGTTGCATTAGAAACTGTGGCGGCAAAAGTAATCCAAAGCAATTGGCTTCTTAGAAATCAGAGTAGTCGATCCAAAAACGGTGATAATAATCTTGGAATTGATCAAGAAGTTGATAATTCTAACCTTGGATCTCCTATGTGA
Protein sequence
MVNNWEIAILKLEVPKLLFILQRIERIEMEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRLKPPAPSTNPNPNDNKSNFNYEPPFPVPVPTQPTLPSPSSKTNIVRDYGAPPNFAYSPNGSPKISPTSALGPTKDLNTVNDLSDHLLQRLSFDGKDLADILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDNNLGIDQEVDNSNLGSPM
Homology
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match:
A0A0A0LRE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058680 PE=4 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 6.2e-56
Identity = 168/379 (44.33%), Postives = 215/379 (56.73%), Query Frame = 0
Query: 29 MEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLP-SSRLKP 88
M+ RGI+ P+RS+FSPK P RK + KS +K K P SS+ KP
Sbjct: 1 MDERGIMGPKRSQFSPK-----------PNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKP 60
Query: 89 PAPSTNPNPNDNKSNFNYE------PPFPVPVPT-------------------------- 148
A +TNPN N NK+N N E PP P P+ T
Sbjct: 61 QAAATNPNSNGNKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLPHNLSPPR 120
Query: 149 ----QPTLPSPSSKTNIVRDYGAPPNFAYSPNGSPKISPTSA-------LGPTKD----- 208
QP PS +SK N VR + S PK SPTS + T D
Sbjct: 121 RSKSQPATPSSASKINFVRRI----DNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPG 180
Query: 209 -LNTVNDLSDHLLQRLSFDGKDLADILQGKSIYDLI-SPKKKEESSSQSIDGWRVFQNLK 268
++ +D+ D LLQRLS +GKDL DIL+G +I DL+ S +KEESSS+++ + Q +
Sbjct: 181 YSDSSHDIGDRLLQRLSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQ 240
Query: 269 EIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLTEREKLVQFLMG 328
+IA+HRQ NLSVE YF+KLK LW+++ S + V+ + +LTER+K++QF +G
Sbjct: 241 KIASHRQGNLSVERYFKKLKKLWNDIGIYSSESVE-----GIAFWSELTERDKVIQFFIG 300
Query: 329 LNDSYATICSQILVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSS 356
LND Y+ ICSQILV PFPTVEEAYSEII EEKRREL VAL TVAA+VIQS++ Q+
Sbjct: 301 LNDYYSIICSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVIQSSY----QNG 355
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match:
A0A0A0LU31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058670 PE=4 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 8.4e-53
Identity = 159/355 (44.79%), Postives = 202/355 (56.90%), Query Frame = 0
Query: 26 RIEMEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRL 85
+I G P + K +P P+ P K + + P + + PSS
Sbjct: 27 KINSSPNGTKKPTDAEVKNSANKHPEKDPNFPSSSKP--KPQAAARNSNPNSNSAPSSPA 86
Query: 86 KPPA--PSTNPNPNDNKSNFNYEPPFPVPVPT-------QPTLPSPSSKTNIVRDYGAPP 145
PP P+T + + PP P P P+ QPT+PS SSK N+VR
Sbjct: 87 PPPTPIPTTRKTKSQPPTPSPALPPTPSPTPSPTRKTKCQPTMPSSSSKNNVVRRIYND- 146
Query: 146 NFAYSPNGSPKISPTS-------ALGPTKDLNT------VNDLSDHLLQRLSFDGKDLAD 205
SP SPKISPTS A+ T N+ ND+ LLQ LSF+GKDL D
Sbjct: 147 ---NSPKASPKISPTSGSDCHEKAVKTTAYPNSPASSDPSNDIGHRLLQGLSFEGKDLDD 206
Query: 206 ILQGKSIYDLI-SPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDE 265
IL+G SI DL+ S KKEESS +++ + Q ++IA+HRQ NLSVE YF+KLK LW++
Sbjct: 207 ILKGNSIDDLMGSNNKKEESSPRNVSSLAILQIYQKIASHRQGNLSVERYFKKLKKLWND 266
Query: 266 LAFNSIDLVQ-CSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEA 325
+ S D Q SS G + +LTER+K++QF +GLND Y+ ICSQILV PFPTVEEA
Sbjct: 267 IGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFIGLNDYYSIICSQILVNQPFPTVEEA 326
Query: 326 YSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDN-NLGIDQEVDNS 356
YSEII EEKRREL VAL +AA+VIQS++ Q S NGDN NLGIDQE+D S
Sbjct: 327 YSEIIREEKRRELFVALGIMAAQVIQSSY----QYGSSNNGDNKNLGIDQEIDRS 371
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match:
A0A6J1GTG4 (serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456959 PE=4 SV=1)
HSP 1 Score: 187.6 bits (475), Expect = 9.3e-44
Identity = 148/351 (42.17%), Postives = 196/351 (55.84%), Query Frame = 0
Query: 35 LSPQR---SRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPK-TATLPSSRLKPPAP 94
+SP+R + +P + EP+ K P+K TD+S P+ + P+S+L P P
Sbjct: 36 MSPRRRPTTPINPNELRTHRKEPQPTVVKRPTKPTDRSSNP--PRIDPSRPNSKLAPSRP 95
Query: 95 STNPNPNDNKSNFNYEPP----FPVPVPTQPTLPSPSSKTNIVRDYGAPPNFAY-----S 154
+ P+PN+ K + P F P PT+P P S G+ +F+ S
Sbjct: 96 AA-PSPNERKLDTKTAPKTTTRFSSPRPTKPITPPSKSNGKGASGSGSRSDFSRAKPSDS 155
Query: 155 PNGSPKISPTSALGPTKDLNTVNDLSD-------------HLLQRLSFDGKDLADI-LQG 214
G+PK + L +D V SD H L +LS D KDLA+I L
Sbjct: 156 QKGTPKNLRSGRLNDQQDEQIVRSYSDGSYGARTLSDPDVHKLHQLSLDDKDLANIVLHA 215
Query: 215 KSIYD-LISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDELAFN 274
+Y+ L S K+EE SSQ + R+FQ KEIA+H Q N S+ Y KLKALWDEL
Sbjct: 216 NLVYESLASETKEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLKALWDELE-A 275
Query: 275 SIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYSEII 334
ID +CS G+ E + EREK++QFL+GLNDSY+TIC+QIL M PFPTVE+A I+
Sbjct: 276 YIDTPKCSC-GSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVEKACCAIL 335
Query: 335 GEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDNNLGIDQEVDNSNL 358
EEKRRELV++LE VAAKVIQ+NWLL+N S NGDN +EVD+ NL
Sbjct: 336 REEKRRELVLSLEIVAAKVIQNNWLLQN--GHSINGDN-----EEVDHMNL 374
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match:
A0A6J1C5Z8 (uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008588 PE=4 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 6.0e-43
Identity = 152/389 (39.07%), Postives = 202/389 (51.93%), Query Frame = 0
Query: 28 EMEGRGILSPQRSRFSPKVYKV---GTPEP-------------------KIPTRKVPSKK 87
+M RG++SP RSR SP+ ++ G P P T + PS
Sbjct: 46 KMTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSAT 105
Query: 88 TDKSKQKLVPKTATLPSSRLKPPAPSTNPNPND--NKSNFN---------YEPPFPVPVP 147
++ +K P+ P P PS PNPND N+ + +P P P
Sbjct: 106 ATRATKKSPPRIRPSPKP-TAPIVPSRRPNPNDLHNQKKLDTKTTPKIGGAKPSSPRTQP 165
Query: 148 TQ-------PTLPSPSSKTNIVRDYGAPPNFAYSPNGSP--KISPTSALGPTKDLNTVND 207
+ P P+P SK + A + S + SP SP+S P+ +D
Sbjct: 166 QRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSPGSAQHHD 225
Query: 208 LSDHL------------------LQRLSFDGKDLAD-ILQGKSIYDLISPKKKEESSSQS 267
+ +H LQRLS DGKDLA IL SIY+ I EES +
Sbjct: 226 MKNHSPYSGGTYTPLADPQLNNHLQRLSIDGKDLASIILHANSIYESIGSDTMEESFQSN 285
Query: 268 IDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLT 327
R+FQ K+IA+HRQEN SV YF KLK LWDEL S D+ QC S GA+E L
Sbjct: 286 AP--RIFQIYKDIASHRQENSSVTSYFTKLKILWDELETYSDDVPQCCSCGAMEKLSGHV 345
Query: 328 EREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVI 356
EREK++QFLMGLN+SY+TIC QIL++ PFPT+E+AYS II EEKR ELV +LE VAAKV+
Sbjct: 346 EREKVMQFLMGLNNSYSTICPQILLIQPFPTMEKAYSIIIREEKRMELVTSLEMVAAKVM 405
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match:
A0A6J1C7L7 (uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008986 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 6.3e-24
Identity = 110/321 (34.27%), Postives = 156/321 (48.60%), Query Frame = 0
Query: 28 EMEGRGILSPQRSRF----SPKVYKVGTPEPKIP-----TRKVPSKKTDKSKQKLV---- 87
+M GRG++SP +SRF S P +P TR+ + + KQ+
Sbjct: 3 KMRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTK 62
Query: 88 ---------------PKTATLPSSRLKPPAPSTNPNPNDNKSNFNYEPPFPVPVPTQPTL 147
PK + SR +P NPN +++ S +
Sbjct: 63 PTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNST--------TKLTIAKIT 122
Query: 148 PSPSSKTNIVRDYGAPPNFAYSPNGS-------PKISPTSALGPTKDLNTV--NDLSDHL 207
S +S N V+ P +GS + + G +D TV + +
Sbjct: 123 TSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQ 182
Query: 208 LQRLSFDGKDLAD-ILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSV 267
LQ+LS DGK A + + S+ + + P KEE S QS + R+ + K+IA+HRQ N S+
Sbjct: 183 LQQLSIDGKHHAKMVFRANSMDESVGPYTKEECSPQS-NAERILEIYKDIASHRQGNSSI 242
Query: 268 EFYFRKLKALWDELAFNSIDLVQCSSGGALENL-GKLTEREKLVQFLMGLNDSYATICSQ 310
YF KL+ LW+EL S DL QC S A + KL EREK++QFL+GLNDSY+TICSQ
Sbjct: 243 TSYFTKLETLWEELETYS-DLPQCCSYSATDQKPSKLVEREKVMQFLVGLNDSYSTICSQ 302
BLAST of Lsi02G005680 vs. NCBI nr
Match:
XP_038895148.1 (proline-rich receptor-like protein kinase PERK2 isoform X1 [Benincasa hispida])
HSP 1 Score: 365.2 bits (936), Expect = 6.7e-97
Identity = 219/358 (61.17%), Postives = 257/358 (71.79%), Query Frame = 0
Query: 29 MEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRLKPP 88
MEGRGI+SP+RSRFSPK+ K GTP+P P + + SK ++ P +P+ PP
Sbjct: 1 MEGRGIMSPKRSRFSPKMTKKGTPQPAKPAKNKHPRNVTGSKIEVTP----IPNP--TPP 60
Query: 89 APSTNPNPNDNKSNFNYEPPFPVPVPT-------QPTLPSPSSKTNIVRDYGAP---PNF 148
+TNP+PN +K+ EP P+P PT QPT PS SS TN+VR G P+
Sbjct: 61 RAATNPSPNHSKTQSRSEPSSPIPPPTPTPTTRSQPTTPS-SSNTNVVRQGGLSFDNPSV 120
Query: 149 A---YSPNGSPKISPTSALGPTKDLN------------TVNDLSDHLLQRLSFDGKDLAD 208
+ +SP K SP S LG KD+N T +DLSD LLQRLSFDGKD+AD
Sbjct: 121 SKSFHSPKDYHKSSPGSWLGLQKDVNTSPDPSSPASSHTASDLSDRLLQRLSFDGKDVAD 180
Query: 209 ILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDEL 268
ILQGKSIYD++ KKEE +SQSIDG RV Q KEIA+HRQENL VE YFRKL ALWDEL
Sbjct: 181 ILQGKSIYDIMGSNKKEE-TSQSIDGLRVLQIYKEIASHRQENLFVEPYFRKLNALWDEL 240
Query: 269 AFNSIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYS 328
+F DL QCSSGGA++N+ +LTER+K+VQFL+GLNDSYATIC QILV PFPTVEEAYS
Sbjct: 241 SFYITDLAQCSSGGAIQNVSELTERQKVVQFLVGLNDSYATICGQILVKRPFPTVEEAYS 300
Query: 329 EIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDNNLGIDQEVDNSNLGSPM 362
EIIGEEKRRELV ALETVAAKVIQSNWLL+NQ+SRS +NN GIDQEVDN+NLGSPM
Sbjct: 301 EIIGEEKRRELVAALETVAAKVIQSNWLLKNQNSRS---NNNRGIDQEVDNANLGSPM 347
BLAST of Lsi02G005680 vs. NCBI nr
Match:
XP_038895149.1 (proline-rich receptor-like protein kinase PERK2 isoform X2 [Benincasa hispida])
HSP 1 Score: 355.9 bits (912), Expect = 4.1e-94
Identity = 217/358 (60.61%), Postives = 255/358 (71.23%), Query Frame = 0
Query: 29 MEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRLKPP 88
MEGRGI+SP+RSRFSPK+ K GTP+P P + + SK ++ P +P+ PP
Sbjct: 1 MEGRGIMSPKRSRFSPKMTKKGTPQPAKPAKNKHPRNVTGSKIEVTP----IPNP--TPP 60
Query: 89 APSTNPNPNDNKSNFNYEPPFPVPVPT-------QPTLPSPSSKTNIVRDYGAP---PNF 148
+TNP+PN +K+ EP P+P PT QPT PS SS TN+VR G P+
Sbjct: 61 RAATNPSPNHSKTQSRSEPSSPIPPPTPTPTTRSQPTTPS-SSNTNVVRQGGLSFDNPSV 120
Query: 149 A---YSPNGSPKISPTSALGPTKDLN------------TVNDLSDHLLQRLSFDGKDLAD 208
+ +SP K SP S LG KD+N T +DLSD LLQRLSFD D+AD
Sbjct: 121 SKSFHSPKDYHKSSPGSWLGLQKDVNTSPDPSSPASSHTASDLSDRLLQRLSFD--DVAD 180
Query: 209 ILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDEL 268
ILQGKSIYD++ KKEE +SQSIDG RV Q KEIA+HRQENL VE YFRKL ALWDEL
Sbjct: 181 ILQGKSIYDIMGSNKKEE-TSQSIDGLRVLQIYKEIASHRQENLFVEPYFRKLNALWDEL 240
Query: 269 AFNSIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYS 328
+F DL QCSSGGA++N+ +LTER+K+VQFL+GLNDSYATIC QILV PFPTVEEAYS
Sbjct: 241 SFYITDLAQCSSGGAIQNVSELTERQKVVQFLVGLNDSYATICGQILVKRPFPTVEEAYS 300
Query: 329 EIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDNNLGIDQEVDNSNLGSPM 362
EIIGEEKRRELV ALETVAAKVIQSNWLL+NQ+SRS +NN GIDQEVDN+NLGSPM
Sbjct: 301 EIIGEEKRRELVAALETVAAKVIQSNWLLKNQNSRS---NNNRGIDQEVDNANLGSPM 345
BLAST of Lsi02G005680 vs. NCBI nr
Match:
XP_011652531.1 (protein ENL [Cucumis sativus] >KGN64485.1 hypothetical protein Csa_013433 [Cucumis sativus])
HSP 1 Score: 228.0 bits (580), Expect = 1.3e-55
Identity = 168/379 (44.33%), Postives = 215/379 (56.73%), Query Frame = 0
Query: 29 MEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLP-SSRLKP 88
M+ RGI+ P+RS+FSPK P RK + KS +K K P SS+ KP
Sbjct: 1 MDERGIMGPKRSQFSPK-----------PNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKP 60
Query: 89 PAPSTNPNPNDNKSNFNYE------PPFPVPVPT-------------------------- 148
A +TNPN N NK+N N E PP P P+ T
Sbjct: 61 QAAATNPNSNGNKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLPHNLSPPR 120
Query: 149 ----QPTLPSPSSKTNIVRDYGAPPNFAYSPNGSPKISPTSA-------LGPTKD----- 208
QP PS +SK N VR + S PK SPTS + T D
Sbjct: 121 RSKSQPATPSSASKINFVRRI----DNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPG 180
Query: 209 -LNTVNDLSDHLLQRLSFDGKDLADILQGKSIYDLI-SPKKKEESSSQSIDGWRVFQNLK 268
++ +D+ D LLQRLS +GKDL DIL+G +I DL+ S +KEESSS+++ + Q +
Sbjct: 181 YSDSSHDIGDRLLQRLSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQ 240
Query: 269 EIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLTEREKLVQFLMG 328
+IA+HRQ NLSVE YF+KLK LW+++ S + V+ + +LTER+K++QF +G
Sbjct: 241 KIASHRQGNLSVERYFKKLKKLWNDIGIYSSESVE-----GIAFWSELTERDKVIQFFIG 300
Query: 329 LNDSYATICSQILVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSS 356
LND Y+ ICSQILV PFPTVEEAYSEII EEKRREL VAL TVAA+VIQS++ Q+
Sbjct: 301 LNDYYSIICSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVIQSSY----QNG 355
BLAST of Lsi02G005680 vs. NCBI nr
Match:
XP_011648413.2 (probable serine/threonine-protein kinase DDB_G0280111 [Cucumis sativus] >KGN64484.1 hypothetical protein Csa_013846 [Cucumis sativus])
HSP 1 Score: 217.6 bits (553), Expect = 1.7e-52
Identity = 159/355 (44.79%), Postives = 202/355 (56.90%), Query Frame = 0
Query: 26 RIEMEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRL 85
+I G P + K +P P+ P K + + P + + PSS
Sbjct: 27 KINSSPNGTKKPTDAEVKNSANKHPEKDPNFPSSSKP--KPQAAARNSNPNSNSAPSSPA 86
Query: 86 KPPA--PSTNPNPNDNKSNFNYEPPFPVPVPT-------QPTLPSPSSKTNIVRDYGAPP 145
PP P+T + + PP P P P+ QPT+PS SSK N+VR
Sbjct: 87 PPPTPIPTTRKTKSQPPTPSPALPPTPSPTPSPTRKTKCQPTMPSSSSKNNVVRRIYND- 146
Query: 146 NFAYSPNGSPKISPTS-------ALGPTKDLNT------VNDLSDHLLQRLSFDGKDLAD 205
SP SPKISPTS A+ T N+ ND+ LLQ LSF+GKDL D
Sbjct: 147 ---NSPKASPKISPTSGSDCHEKAVKTTAYPNSPASSDPSNDIGHRLLQGLSFEGKDLDD 206
Query: 206 ILQGKSIYDLI-SPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDE 265
IL+G SI DL+ S KKEESS +++ + Q ++IA+HRQ NLSVE YF+KLK LW++
Sbjct: 207 ILKGNSIDDLMGSNNKKEESSPRNVSSLAILQIYQKIASHRQGNLSVERYFKKLKKLWND 266
Query: 266 LAFNSIDLVQ-CSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEA 325
+ S D Q SS G + +LTER+K++QF +GLND Y+ ICSQILV PFPTVEEA
Sbjct: 267 IGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFIGLNDYYSIICSQILVNQPFPTVEEA 326
Query: 326 YSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDN-NLGIDQEVDNS 356
YSEII EEKRREL VAL +AA+VIQS++ Q S NGDN NLGIDQE+D S
Sbjct: 327 YSEIIREEKRRELFVALGIMAAQVIQSSY----QYGSSNNGDNKNLGIDQEIDRS 371
BLAST of Lsi02G005680 vs. NCBI nr
Match:
XP_038895286.1 (hybrid signal transduction histidine kinase L-like isoform X2 [Benincasa hispida])
HSP 1 Score: 217.6 bits (553), Expect = 1.7e-52
Identity = 163/369 (44.17%), Postives = 208/369 (56.37%), Query Frame = 0
Query: 32 RGILSPQRSRFS------------PKVYKVGTPEPKIPTRKVPSK-------KTDKSKQK 91
RGILSP R++FS P E PT P+K ++ + +
Sbjct: 4 RGILSPPRTKFSSSRNNSNNAASKPNELSKNLREETKPTTIRPTKNNNGNGRSSNNNTSR 63
Query: 92 LVPKTATLPSSRLKPPAPSTNPNPN---DNKSNFNY-----EPPFPVPVPTQPTLPSPSS 151
+ P +T +P ++NPN D S P P PV T T P+P+S
Sbjct: 64 INPSKSTSKLVSSRPKTATSNPNGQKKLDKNSTTKIISKPSSPRTPKPV-THQTRPTPNS 123
Query: 152 KTNIVR------------DYGAPPNFAYSPNGSPKISPTSALGPTKDLNTVNDL--SDHL 211
K N+ + +S NGSP ++ T++DL SD
Sbjct: 124 KRNVKNRIASCSGSRSELSSAGKNKYFHSRNGSPNDLGSNHRYSAGHYATLHDLHVSDQ- 183
Query: 212 LQRLSFDGKDLAD-ILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSV 271
LQRLS DGKDLA +L SIY+ + KE SSSQS D R+FQ KEIA HRQEN S+
Sbjct: 184 LQRLSIDGKDLAGMVLHPNSIYESMGSDTKEASSSQSNDS-RMFQIYKEIAFHRQENSSI 243
Query: 272 EFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQI 331
YF KL+ALWDELA DL+QCS GGA E L + EREK++QFL+GLNDSY+ IC+QI
Sbjct: 244 TSYFTKLEALWDELATFKTDLLQCSCGGATEKLSEYMEREKVMQFLVGLNDSYSKICNQI 303
Query: 332 LVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVIQSNWL-LRNQSSR-SKNGDNNLG 357
L+ TPFPT+E+AYS +I EEK RELVV LE+VA KVIQ+NWL L+NQ++ S NGDNN G
Sbjct: 304 LLSTPFPTMEKAYSAVIREEKHRELVVELESVAGKVIQNNWLDLQNQNAHSSNNGDNNDG 363
BLAST of Lsi02G005680 vs. TAIR 10
Match:
AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 50.1 bits (118), Expect = 4.4e-06
Identity = 30/101 (29.70%), Postives = 54/101 (53.47%), Query Frame = 0
Query: 211 RVFQNLKEIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGG----ALENLGKLT 270
+++Q + +A RQ SVE YF KL +W EL+ + +C GG + +
Sbjct: 126 KIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELS-EYAPIPECKCGGCNCECTKRAEEAR 185
Query: 271 EREKLVQFLMG--LNDSYATICSQILVMTPFPTVEEAYSEI 306
E+E+ +FLMG LN + + ++I+ P P++ EA++ +
Sbjct: 186 EKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMV 225
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LRE6 | 6.2e-56 | 44.33 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058680 PE=4 SV=1 | [more] |
A0A0A0LU31 | 8.4e-53 | 44.79 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058670 PE=4 SV=1 | [more] |
A0A6J1GTG4 | 9.3e-44 | 42.17 | serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 G... | [more] |
A0A6J1C5Z8 | 6.0e-43 | 39.07 | uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A6J1C7L7 | 6.3e-24 | 34.27 | uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
Match Name | E-value | Identity | Description | |
XP_038895148.1 | 6.7e-97 | 61.17 | proline-rich receptor-like protein kinase PERK2 isoform X1 [Benincasa hispida] | [more] |
XP_038895149.1 | 4.1e-94 | 60.61 | proline-rich receptor-like protein kinase PERK2 isoform X2 [Benincasa hispida] | [more] |
XP_011652531.1 | 1.3e-55 | 44.33 | protein ENL [Cucumis sativus] >KGN64485.1 hypothetical protein Csa_013433 [Cucum... | [more] |
XP_011648413.2 | 1.7e-52 | 44.79 | probable serine/threonine-protein kinase DDB_G0280111 [Cucumis sativus] >KGN6448... | [more] |
XP_038895286.1 | 1.7e-52 | 44.17 | hybrid signal transduction histidine kinase L-like isoform X2 [Benincasa hispida... | [more] |
Match Name | E-value | Identity | Description | |
AT1G21280.1 | 4.4e-06 | 29.70 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... | [more] |