Lsi02G005680 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTTCCAATTATGAGACTCCCTGCCAAGAAGTAACCTTCTGAAAAGGGGGGATCACACCTGTAATTCGGCATTCCACGCATCTTTAACAGAAATCAAAGTGTTGCTAGTTAAGTTGAAGAATCTAGGATGAGCGTCTTTCAGTTTATTCCCCTGAATCCAACGATGATGCCAGAAACAGGGTATTACCACCATTCTTGATATTCCACTGGATCTTGCTGCAAATGACGTCTTTTAATTTTGAAATATTGAACCAGGGAGCTTTAGCACTGACGAATTTACATTTGTTAGGCACTTTGCCAATATCTTCAGGATTATATTTACCATCGATCAGAGATCTCCATAGCTGTTCAGGTTCATTTAAGTACCGCCAAATAAATCAAAATGCATTTAGTAGATTGATTAAATGCATTTTGATTTATTTTTTTCTCTGAAACTTGATTTATTTAGATGTATGTTTGTGTATGGATTAACCCCCTTACCCACGAATGTAGGTCTTACCTATAGATTTGGCTTGCACGTTACCTTCTTGTTCGTCTAGCTTAAATCATACAAGTAGCAAAAGGTTGATTTCATGTATGCTAAGGAATATAAATTGCACGTAGACTTTAAATGCATGTTCAATCTAGGTTCAAAGATAAGATTCTATCACGGTCTATCATTGATAGACAGTGAAATTTTTCTATATTTATAAATATTTCGATATTTTATTTGAGAAAATTAATATAAACAGAAAAAATATCAAACTATTTACAAATATAGAAAAATAATACTGTTTATCAACGATAGACTACGATAGATTTCTATCGCTTGACATATAGAGTTCTATCATTATTTATCGCTCAAGTGATAGAATTCTATCACAGTCATTCGCTGATAGACAATAAAATTTTTCTATATCTATAAATAGTTTAACTTTTTTTTCTATATTTGAAAACGTCCTTTTTATCTATTTATAGTAATTTTTCCTTTTTTTATCCATTACAATTTCTCTTTCTAAAATACAAATCTTGTGGACTGTTATGATTGTTTAGATTGTTGTTCTATTATTGACGGAGGTGTTTTATATTTGTCTTTTTGTTATTCTTATTTTTTTATATATATAATTTAAAAACTTGTATGAGTCTTTTTTTTTTTTTCTTTTCTTTTATTTTATTGAGTACTAGACTTGTATTAGATTGCAATTGTTATCATTAGATATTTGAATAAAATAGACGATTGCCAGCCTTATTGTTCTGTCCCTACTTTTCTTTCTTCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCCCCCCCCCCCGTTTTTGTTAAGGGTTCTGTCATACTAATTAATATATATTATCTCCTAATCGTAATTTTTATTTTTTATTTTGAAAGTTATATTTTTTAAAATGAGTCAATTTATTTATAAATATAGTAAAATATCACTTTCTATTAGTGATAAACACGGCTAGACATCTATCAGCGTCTATTACTGTCAACTTATTTTTGAAACCATATTTTAAAAATATTTTTGAAGCCGAAAATGAGTCAACTAATAAACATCTATCAGTGTCTATCACTGTCAACTTATTTTTACTTTTACTTTCGAAACCATATTTTTAACTCGAAAATGAGTTAACTTATTTACAAATATAACAAAATGTCACTATCTAATATTAGTGATATATACTGATAGACATCTATCAACGTTTATAACTGTCACTAATAGATGTCTATCACTAACATTTTGTTATATTTGAAAATATTTTCAGCAGTTTTACCATTTAAAACAATTATTCGCGATAGATGTCTATCACTATCAACTTTTATTTTATTTTAGGTCTGTTTTCAAATATAGGAAAATGAACCAAAATATTTATAAATATAACAAAATTTCATTGTCTATCCGCGATAGACCATGATAGACTACTATCTGTGTCTATCTGTAGTCTATCTCGACACAGATAGTAGTCTATCGCGATCTAGACAGTAAAATTTAGTTACATTTATAGATATTTTCAACAGTTTTGTCATTTAAAATAATTTTCCTTAGAATATTCGATAAAATAATGTTAAATAACATTTTATTTAAAAAATATGTTATATGAGATTTAGCTATAATGACCCAAGCAAATGTACTATATTAATTATATAGAAATTTTCATAGATAGAAAAAATGTCATACTATTTATAGAAAATAGCAAAAAAAATACTGATAGACATTGATAGACTTTTATCAGCATCTATCAGTGATAGACTTCTATCATTTCTATCACTGATAGACCATGATAGACTTATATCAGCGTCTATCACAACTATAAAAAATTTTGCTATTTTGTTTAAATAGTTTTTCTCATTTTTCTATTTTTAAAAACTCTCCTTAATTATAGTGAGTCATTTTAATTATAATTTCATTCTTCTTGTCATTTTAAGAAAGAATCGTCACAAATATAGCAATCAAATTCAAAGAATTAGTATATATAACAATATTTTTAAAAAATTGCAAATATACCAAAGTCTATCAGTGATAAACTTCTATCCCGAATAGACTCTTATAGTCTAATGATCCAAAATATCGCCTAGCCCCCACCCAATTAACCACATTCACAAGATCAACACTATCAAATTCCACAACAGAAGGACCTGATCAGCAAAACCAAACAAGCCTTCAACAATAACGAGAGGGAGCTTGAAGGTTATTGATATGTCTTATTTACACCTAACCTTAATTAGATAAACATGAATTTCAGAAAGAATATTAAATATAAAAATAAATGGATTATTATAAAAGGTATGAAAATGTCAACTCTAGGTGGCGTCAGAGGGTTTTGTTAGGGGTAACTAGAGTAGGCTTGAGCGTTTGACTTTGCCCAAATAGAAGACCCTACATTATATTTATTTCCCATGTGAACAGAAATAATTGGGAGATTGCAATTCTGAAACTTGAGGTACCTAAATTATTGTTCATTCTCCAGAGAATTGAAAGGATAGAAATGGAGGGAAGAGGAATTCTGAGCCCACAAAGATCCCGATTTTCTCCAAAAGTTTACAAAGTGGGTACTCCAGAGCCAAAAATACCGACCAGGAAAGTTCCATCCAAGAAAACAGATAAATCAAAACAAAAACTGGTTCCAAAAACTGCGACTTTACCCTCCTCAAGGCTAAAGCCACCAGCACCATCCACAAATCCTAATCCTAACGACAATAAAAGTAATTTCAATTATGAACCACCTTTCCCAGTTCCAGTTCCAACTCAACCCACCCTGCCTTCGCCTTCTTCAAAGACCAATATTGTAAGAGATTATGGTGCGCCTCCTAATTTTGCGTATTCTCCAAATGGTTCTCCCAAGATTTCGCCCACCTCTGCCTTGGGTCCTACAAAAGATCTCAACACTGTTAATGATCTTAGTGATCATTTGTTACAACGCCTTTCTTTTGACGGTAAGCTTTCTTAATACTTCAAACATTTTCTTTTTCATTTTCATGCAAATTTTTCATTATTTACTGCACACGAAAAATTTCATGAATACTGTGTAGTACTGTGACAATAATGTGGGTCCATGAAATAAATTAATAATGTTGACATAATGTGAGTAGTAGATAATACGATAGTACTAAAACTTTTTTCGAATTTAAAGTCACAGTCTCTTACGAGTGAAATTGTAAATTTGCATAAGATCTAGGAAATAATTATCATTATTTATTTTTATTTTTTTTGAAAAAATTACATATTAGTAGTACTCAAAATATAAATTTAGTCATCCAAACTTTTGAAAGTTTTTAAAAGTTTAAGCTAGGTTGTATTAGATATGTCAAAGTAAGGTTAGCTCGAAGTTTTGACTTTCCATCTTCGTAGTTGTTGTATTATAAAAATTGTATTAGGCGTAAAATTAAAATTTATATTTAATGGTTAACATGAATATCTTACTAATTTGTTTATTTATATCAAAATTGGTGAAAATAGTAGTGATTTAAAATTTTAATAATAACTAAAAATTTATTAATGAAAACAAAATGATAAAAGAAAGGAATGAAAGAAGGGAGAGGTGAAAACAGAATAAGAGATATAAAAAATGAAAACAAAATGAAAAGGATAATTGAATATTAAAATAAAAAATTAATTTAAAAAGATATAGGTAGGGAGAGAAAAAGAGGAGAGATGGGGCGAGAGAAAAGATGGGTTTGAAAGGAGAAGACCGAGGAGAGAGAAATATGGGTGCATGTATGGGAATGGAAAAAAATAGAAACACAATTTTAAAAAGTTACTGGCCCGTTTTATAATCATTTTATTTTTTATTTTTGTTTTTAAAAATTAAGTTTATAAACACTACTTTCACCTTCAGATTTATTCATTTGTTATCTACTTTTTACCAACGGTTTTAAAAACCAAATAAAAATTTGAAAACTAAAAAAACTAGCTTTTAAAAACTTGTTTTTGTTTTTAAATTTGACAAAGAATTCAACTATTGTAATTAGGAAGAGATGCAAATCAAGGTAAGAAATAGGTAGGACATAGCTTAATTTTCACAAACAAAAATAGAAAAACAAAATACTTATCAAACTAAGGCCTATACTTTTTAATTTGTCAGATTTGACATATTTTTAGAGACATTTTTTTAAATTTAAAAACAATAAAAACTAATGGTTATTAAACATCTGCTTCTACCAAAATGAGAAACAAAGTTATGATTCTGTAGCCTTATTCTACCTTCCTTATTTACTCTAGTTATTATATGAATCAACTTCAAGTTATAGTTCTAGTTTTTTCATTTCAAATCAGATATCACAAAGAAAACACAGAATTTTTTATATTCCTTTAAGTCGTTATAGTTGTGTTTTAAATCTTGTACCCTTAAAAAAAAAAAAAAAAAAATCACATGTGTAGGTAAAGATCTTGCGGACATCCTCCAAGGAAAGTCGATATATGATTTAATCAGCCCAAAAAAAAAGGAAGAATCTTCTTCTCAAAGCATTGATGGTTGGAGAGTATTTCAAAATTTGAAGGAAATTGCAGCTCATCGGCAAGAAAACTTATCCGTTGAATTTTACTTCAGAAAACTCAAGGCACTATGGGATGAACTTGCATTCAACAGTATTGATTTGGTTCAATGTTCCAGTGGTGGTGCACTGGAAAATCTGGGCAAGCTTACAGAGAGAGAAAAACTTGTGCAATTTCTTATGGGACTAAATGATTCTTATGCCACAATTTGCAGTCAAATCCTTGTTATGACCCCATTTCCAACGGTGGAAGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGTTGCATTAGAAACTGTGGCGGCAAAAGTAATCCAAAGCAATTGGCTTCTTAGAAATCAGAGTAGTCGATCCAAAAACGGTGATAATAATCTTGGAATTGATCAAGAAGTTGATAATTCTAACCTTGGATCTCCTATGTGA ATGGTAAATAATTGGGAGATTGCAATTCTGAAACTTGAGGTACCTAAATTATTGTTCATTCTCCAGAGAATTGAAAGGATAGAAATGGAGGGAAGAGGAATTCTGAGCCCACAAAGATCCCGATTTTCTCCAAAAGTTTACAAAGTGGGTACTCCAGAGCCAAAAATACCGACCAGGAAAGTTCCATCCAAGAAAACAGATAAATCAAAACAAAAACTGGTTCCAAAAACTGCGACTTTACCCTCCTCAAGGCTAAAGCCACCAGCACCATCCACAAATCCTAATCCTAACGACAATAAAAGTAATTTCAATTATGAACCACCTTTCCCAGTTCCAGTTCCAACTCAACCCACCCTGCCTTCGCCTTCTTCAAAGACCAATATTGTAAGAGATTATGGTGCGCCTCCTAATTTTGCGTATTCTCCAAATGGTTCTCCCAAGATTTCGCCCACCTCTGCCTTGGGTCCTACAAAAGATCTCAACACTGTTAATGATCTTAGTGATCATTTGTTACAACGCCTTTCTTTTGACGGTAAAGATCTTGCGGACATCCTCCAAGGAAAGTCGATATATGATTTAATCAGCCCAAAAAAAAAGGAAGAATCTTCTTCTCAAAGCATTGATGGTTGGAGAGTATTTCAAAATTTGAAGGAAATTGCAGCTCATCGGCAAGAAAACTTATCCGTTGAATTTTACTTCAGAAAACTCAAGGCACTATGGGATGAACTTGCATTCAACAGTATTGATTTGGTTCAATGTTCCAGTGGTGGTGCACTGGAAAATCTGGGCAAGCTTACAGAGAGAGAAAAACTTGTGCAATTTCTTATGGGACTAAATGATTCTTATGCCACAATTTGCAGTCAAATCCTTGTTATGACCCCATTTCCAACGGTGGAAGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGTTGCATTAGAAACTGTGGCGGCAAAAGTAATCCAAAGCAATTGGCTTCTTAGAAATCAGAGTAGTCGATCCAAAAACGGTGATAATAATCTTGGAATTGATCAAGAAGTTGATAATTCTAACCTTGGATCTCCTATGTGA ATGGTAAATAATTGGGAGATTGCAATTCTGAAACTTGAGGTACCTAAATTATTGTTCATTCTCCAGAGAATTGAAAGGATAGAAATGGAGGGAAGAGGAATTCTGAGCCCACAAAGATCCCGATTTTCTCCAAAAGTTTACAAAGTGGGTACTCCAGAGCCAAAAATACCGACCAGGAAAGTTCCATCCAAGAAAACAGATAAATCAAAACAAAAACTGGTTCCAAAAACTGCGACTTTACCCTCCTCAAGGCTAAAGCCACCAGCACCATCCACAAATCCTAATCCTAACGACAATAAAAGTAATTTCAATTATGAACCACCTTTCCCAGTTCCAGTTCCAACTCAACCCACCCTGCCTTCGCCTTCTTCAAAGACCAATATTGTAAGAGATTATGGTGCGCCTCCTAATTTTGCGTATTCTCCAAATGGTTCTCCCAAGATTTCGCCCACCTCTGCCTTGGGTCCTACAAAAGATCTCAACACTGTTAATGATCTTAGTGATCATTTGTTACAACGCCTTTCTTTTGACGGTAAAGATCTTGCGGACATCCTCCAAGGAAAGTCGATATATGATTTAATCAGCCCAAAAAAAAAGGAAGAATCTTCTTCTCAAAGCATTGATGGTTGGAGAGTATTTCAAAATTTGAAGGAAATTGCAGCTCATCGGCAAGAAAACTTATCCGTTGAATTTTACTTCAGAAAACTCAAGGCACTATGGGATGAACTTGCATTCAACAGTATTGATTTGGTTCAATGTTCCAGTGGTGGTGCACTGGAAAATCTGGGCAAGCTTACAGAGAGAGAAAAACTTGTGCAATTTCTTATGGGACTAAATGATTCTTATGCCACAATTTGCAGTCAAATCCTTGTTATGACCCCATTTCCAACGGTGGAAGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGTTGCATTAGAAACTGTGGCGGCAAAAGTAATCCAAAGCAATTGGCTTCTTAGAAATCAGAGTAGTCGATCCAAAAACGGTGATAATAATCTTGGAATTGATCAAGAAGTTGATAATTCTAACCTTGGATCTCCTATGTGA MVNNWEIAILKLEVPKLLFILQRIERIEMEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRLKPPAPSTNPNPNDNKSNFNYEPPFPVPVPTQPTLPSPSSKTNIVRDYGAPPNFAYSPNGSPKISPTSALGPTKDLNTVNDLSDHLLQRLSFDGKDLADILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDNNLGIDQEVDNSNLGSPM Homology
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match: A0A0A0LRE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058680 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 6.2e-56 Identity = 168/379 (44.33%), Postives = 215/379 (56.73%), Query Frame = 0
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match: A0A0A0LU31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058670 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 8.4e-53 Identity = 159/355 (44.79%), Postives = 202/355 (56.90%), Query Frame = 0
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match: A0A6J1GTG4 (serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456959 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 9.3e-44 Identity = 148/351 (42.17%), Postives = 196/351 (55.84%), Query Frame = 0
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match: A0A6J1C5Z8 (uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008588 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 6.0e-43 Identity = 152/389 (39.07%), Postives = 202/389 (51.93%), Query Frame = 0
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match: A0A6J1C7L7 (uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008986 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 6.3e-24 Identity = 110/321 (34.27%), Postives = 156/321 (48.60%), Query Frame = 0
BLAST of Lsi02G005680 vs. NCBI nr
Match: XP_038895148.1 (proline-rich receptor-like protein kinase PERK2 isoform X1 [Benincasa hispida]) HSP 1 Score: 365.2 bits (936), Expect = 6.7e-97 Identity = 219/358 (61.17%), Postives = 257/358 (71.79%), Query Frame = 0
BLAST of Lsi02G005680 vs. NCBI nr
Match: XP_038895149.1 (proline-rich receptor-like protein kinase PERK2 isoform X2 [Benincasa hispida]) HSP 1 Score: 355.9 bits (912), Expect = 4.1e-94 Identity = 217/358 (60.61%), Postives = 255/358 (71.23%), Query Frame = 0
BLAST of Lsi02G005680 vs. NCBI nr
Match: XP_011652531.1 (protein ENL [Cucumis sativus] >KGN64485.1 hypothetical protein Csa_013433 [Cucumis sativus]) HSP 1 Score: 228.0 bits (580), Expect = 1.3e-55 Identity = 168/379 (44.33%), Postives = 215/379 (56.73%), Query Frame = 0
BLAST of Lsi02G005680 vs. NCBI nr
Match: XP_011648413.2 (probable serine/threonine-protein kinase DDB_G0280111 [Cucumis sativus] >KGN64484.1 hypothetical protein Csa_013846 [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 1.7e-52 Identity = 159/355 (44.79%), Postives = 202/355 (56.90%), Query Frame = 0
BLAST of Lsi02G005680 vs. NCBI nr
Match: XP_038895286.1 (hybrid signal transduction histidine kinase L-like isoform X2 [Benincasa hispida]) HSP 1 Score: 217.6 bits (553), Expect = 1.7e-52 Identity = 163/369 (44.17%), Postives = 208/369 (56.37%), Query Frame = 0
BLAST of Lsi02G005680 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 4.4e-06 Identity = 30/101 (29.70%), Postives = 54/101 (53.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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