Lsi02G005680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G005680
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr02: 5039105 .. 5044933 (-)
RNA-Seq ExpressionLsi02G005680
SyntenyLsi02G005680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTCCAATTATGAGACTCCCTGCCAAGAAGTAACCTTCTGAAAAGGGGGGATCACACCTGTAATTCGGCATTCCACGCATCTTTAACAGAAATCAAAGTGTTGCTAGTTAAGTTGAAGAATCTAGGATGAGCGTCTTTCAGTTTATTCCCCTGAATCCAACGATGATGCCAGAAACAGGGTATTACCACCATTCTTGATATTCCACTGGATCTTGCTGCAAATGACGTCTTTTAATTTTGAAATATTGAACCAGGGAGCTTTAGCACTGACGAATTTACATTTGTTAGGCACTTTGCCAATATCTTCAGGATTATATTTACCATCGATCAGAGATCTCCATAGCTGTTCAGGTTCATTTAAGTACCGCCAAATAAATCAAAATGCATTTAGTAGATTGATTAAATGCATTTTGATTTATTTTTTTCTCTGAAACTTGATTTATTTAGATGTATGTTTGTGTATGGATTAACCCCCTTACCCACGAATGTAGGTCTTACCTATAGATTTGGCTTGCACGTTACCTTCTTGTTCGTCTAGCTTAAATCATACAAGTAGCAAAAGGTTGATTTCATGTATGCTAAGGAATATAAATTGCACGTAGACTTTAAATGCATGTTCAATCTAGGTTCAAAGATAAGATTCTATCACGGTCTATCATTGATAGACAGTGAAATTTTTCTATATTTATAAATATTTCGATATTTTATTTGAGAAAATTAATATAAACAGAAAAAATATCAAACTATTTACAAATATAGAAAAATAATACTGTTTATCAACGATAGACTACGATAGATTTCTATCGCTTGACATATAGAGTTCTATCATTATTTATCGCTCAAGTGATAGAATTCTATCACAGTCATTCGCTGATAGACAATAAAATTTTTCTATATCTATAAATAGTTTAACTTTTTTTTCTATATTTGAAAACGTCCTTTTTATCTATTTATAGTAATTTTTCCTTTTTTTATCCATTACAATTTCTCTTTCTAAAATACAAATCTTGTGGACTGTTATGATTGTTTAGATTGTTGTTCTATTATTGACGGAGGTGTTTTATATTTGTCTTTTTGTTATTCTTATTTTTTTATATATATAATTTAAAAACTTGTATGAGTCTTTTTTTTTTTTTCTTTTCTTTTATTTTATTGAGTACTAGACTTGTATTAGATTGCAATTGTTATCATTAGATATTTGAATAAAATAGACGATTGCCAGCCTTATTGTTCTGTCCCTACTTTTCTTTCTTCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCCCCCCCCCCCGTTTTTGTTAAGGGTTCTGTCATACTAATTAATATATATTATCTCCTAATCGTAATTTTTATTTTTTATTTTGAAAGTTATATTTTTTAAAATGAGTCAATTTATTTATAAATATAGTAAAATATCACTTTCTATTAGTGATAAACACGGCTAGACATCTATCAGCGTCTATTACTGTCAACTTATTTTTGAAACCATATTTTAAAAATATTTTTGAAGCCGAAAATGAGTCAACTAATAAACATCTATCAGTGTCTATCACTGTCAACTTATTTTTACTTTTACTTTCGAAACCATATTTTTAACTCGAAAATGAGTTAACTTATTTACAAATATAACAAAATGTCACTATCTAATATTAGTGATATATACTGATAGACATCTATCAACGTTTATAACTGTCACTAATAGATGTCTATCACTAACATTTTGTTATATTTGAAAATATTTTCAGCAGTTTTACCATTTAAAACAATTATTCGCGATAGATGTCTATCACTATCAACTTTTATTTTATTTTAGGTCTGTTTTCAAATATAGGAAAATGAACCAAAATATTTATAAATATAACAAAATTTCATTGTCTATCCGCGATAGACCATGATAGACTACTATCTGTGTCTATCTGTAGTCTATCTCGACACAGATAGTAGTCTATCGCGATCTAGACAGTAAAATTTAGTTACATTTATAGATATTTTCAACAGTTTTGTCATTTAAAATAATTTTCCTTAGAATATTCGATAAAATAATGTTAAATAACATTTTATTTAAAAAATATGTTATATGAGATTTAGCTATAATGACCCAAGCAAATGTACTATATTAATTATATAGAAATTTTCATAGATAGAAAAAATGTCATACTATTTATAGAAAATAGCAAAAAAAATACTGATAGACATTGATAGACTTTTATCAGCATCTATCAGTGATAGACTTCTATCATTTCTATCACTGATAGACCATGATAGACTTATATCAGCGTCTATCACAACTATAAAAAATTTTGCTATTTTGTTTAAATAGTTTTTCTCATTTTTCTATTTTTAAAAACTCTCCTTAATTATAGTGAGTCATTTTAATTATAATTTCATTCTTCTTGTCATTTTAAGAAAGAATCGTCACAAATATAGCAATCAAATTCAAAGAATTAGTATATATAACAATATTTTTAAAAAATTGCAAATATACCAAAGTCTATCAGTGATAAACTTCTATCCCGAATAGACTCTTATAGTCTAATGATCCAAAATATCGCCTAGCCCCCACCCAATTAACCACATTCACAAGATCAACACTATCAAATTCCACAACAGAAGGACCTGATCAGCAAAACCAAACAAGCCTTCAACAATAACGAGAGGGAGCTTGAAGGTTATTGATATGTCTTATTTACACCTAACCTTAATTAGATAAACATGAATTTCAGAAAGAATATTAAATATAAAAATAAATGGATTATTATAAAAGGTATGAAAATGTCAACTCTAGGTGGCGTCAGAGGGTTTTGTTAGGGGTAACTAGAGTAGGCTTGAGCGTTTGACTTTGCCCAAATAGAAGACCCTACATTATATTTATTTCCCATGTGAACAGAAATAATTGGGAGATTGCAATTCTGAAACTTGAGGTACCTAAATTATTGTTCATTCTCCAGAGAATTGAAAGGATAGAAATGGAGGGAAGAGGAATTCTGAGCCCACAAAGATCCCGATTTTCTCCAAAAGTTTACAAAGTGGGTACTCCAGAGCCAAAAATACCGACCAGGAAAGTTCCATCCAAGAAAACAGATAAATCAAAACAAAAACTGGTTCCAAAAACTGCGACTTTACCCTCCTCAAGGCTAAAGCCACCAGCACCATCCACAAATCCTAATCCTAACGACAATAAAAGTAATTTCAATTATGAACCACCTTTCCCAGTTCCAGTTCCAACTCAACCCACCCTGCCTTCGCCTTCTTCAAAGACCAATATTGTAAGAGATTATGGTGCGCCTCCTAATTTTGCGTATTCTCCAAATGGTTCTCCCAAGATTTCGCCCACCTCTGCCTTGGGTCCTACAAAAGATCTCAACACTGTTAATGATCTTAGTGATCATTTGTTACAACGCCTTTCTTTTGACGGTAAGCTTTCTTAATACTTCAAACATTTTCTTTTTCATTTTCATGCAAATTTTTCATTATTTACTGCACACGAAAAATTTCATGAATACTGTGTAGTACTGTGACAATAATGTGGGTCCATGAAATAAATTAATAATGTTGACATAATGTGAGTAGTAGATAATACGATAGTACTAAAACTTTTTTCGAATTTAAAGTCACAGTCTCTTACGAGTGAAATTGTAAATTTGCATAAGATCTAGGAAATAATTATCATTATTTATTTTTATTTTTTTTGAAAAAATTACATATTAGTAGTACTCAAAATATAAATTTAGTCATCCAAACTTTTGAAAGTTTTTAAAAGTTTAAGCTAGGTTGTATTAGATATGTCAAAGTAAGGTTAGCTCGAAGTTTTGACTTTCCATCTTCGTAGTTGTTGTATTATAAAAATTGTATTAGGCGTAAAATTAAAATTTATATTTAATGGTTAACATGAATATCTTACTAATTTGTTTATTTATATCAAAATTGGTGAAAATAGTAGTGATTTAAAATTTTAATAATAACTAAAAATTTATTAATGAAAACAAAATGATAAAAGAAAGGAATGAAAGAAGGGAGAGGTGAAAACAGAATAAGAGATATAAAAAATGAAAACAAAATGAAAAGGATAATTGAATATTAAAATAAAAAATTAATTTAAAAAGATATAGGTAGGGAGAGAAAAAGAGGAGAGATGGGGCGAGAGAAAAGATGGGTTTGAAAGGAGAAGACCGAGGAGAGAGAAATATGGGTGCATGTATGGGAATGGAAAAAAATAGAAACACAATTTTAAAAAGTTACTGGCCCGTTTTATAATCATTTTATTTTTTATTTTTGTTTTTAAAAATTAAGTTTATAAACACTACTTTCACCTTCAGATTTATTCATTTGTTATCTACTTTTTACCAACGGTTTTAAAAACCAAATAAAAATTTGAAAACTAAAAAAACTAGCTTTTAAAAACTTGTTTTTGTTTTTAAATTTGACAAAGAATTCAACTATTGTAATTAGGAAGAGATGCAAATCAAGGTAAGAAATAGGTAGGACATAGCTTAATTTTCACAAACAAAAATAGAAAAACAAAATACTTATCAAACTAAGGCCTATACTTTTTAATTTGTCAGATTTGACATATTTTTAGAGACATTTTTTTAAATTTAAAAACAATAAAAACTAATGGTTATTAAACATCTGCTTCTACCAAAATGAGAAACAAAGTTATGATTCTGTAGCCTTATTCTACCTTCCTTATTTACTCTAGTTATTATATGAATCAACTTCAAGTTATAGTTCTAGTTTTTTCATTTCAAATCAGATATCACAAAGAAAACACAGAATTTTTTATATTCCTTTAAGTCGTTATAGTTGTGTTTTAAATCTTGTACCCTTAAAAAAAAAAAAAAAAAAATCACATGTGTAGGTAAAGATCTTGCGGACATCCTCCAAGGAAAGTCGATATATGATTTAATCAGCCCAAAAAAAAAGGAAGAATCTTCTTCTCAAAGCATTGATGGTTGGAGAGTATTTCAAAATTTGAAGGAAATTGCAGCTCATCGGCAAGAAAACTTATCCGTTGAATTTTACTTCAGAAAACTCAAGGCACTATGGGATGAACTTGCATTCAACAGTATTGATTTGGTTCAATGTTCCAGTGGTGGTGCACTGGAAAATCTGGGCAAGCTTACAGAGAGAGAAAAACTTGTGCAATTTCTTATGGGACTAAATGATTCTTATGCCACAATTTGCAGTCAAATCCTTGTTATGACCCCATTTCCAACGGTGGAAGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGTTGCATTAGAAACTGTGGCGGCAAAAGTAATCCAAAGCAATTGGCTTCTTAGAAATCAGAGTAGTCGATCCAAAAACGGTGATAATAATCTTGGAATTGATCAAGAAGTTGATAATTCTAACCTTGGATCTCCTATGTGA

mRNA sequence

ATGGTAAATAATTGGGAGATTGCAATTCTGAAACTTGAGGTACCTAAATTATTGTTCATTCTCCAGAGAATTGAAAGGATAGAAATGGAGGGAAGAGGAATTCTGAGCCCACAAAGATCCCGATTTTCTCCAAAAGTTTACAAAGTGGGTACTCCAGAGCCAAAAATACCGACCAGGAAAGTTCCATCCAAGAAAACAGATAAATCAAAACAAAAACTGGTTCCAAAAACTGCGACTTTACCCTCCTCAAGGCTAAAGCCACCAGCACCATCCACAAATCCTAATCCTAACGACAATAAAAGTAATTTCAATTATGAACCACCTTTCCCAGTTCCAGTTCCAACTCAACCCACCCTGCCTTCGCCTTCTTCAAAGACCAATATTGTAAGAGATTATGGTGCGCCTCCTAATTTTGCGTATTCTCCAAATGGTTCTCCCAAGATTTCGCCCACCTCTGCCTTGGGTCCTACAAAAGATCTCAACACTGTTAATGATCTTAGTGATCATTTGTTACAACGCCTTTCTTTTGACGGTAAAGATCTTGCGGACATCCTCCAAGGAAAGTCGATATATGATTTAATCAGCCCAAAAAAAAAGGAAGAATCTTCTTCTCAAAGCATTGATGGTTGGAGAGTATTTCAAAATTTGAAGGAAATTGCAGCTCATCGGCAAGAAAACTTATCCGTTGAATTTTACTTCAGAAAACTCAAGGCACTATGGGATGAACTTGCATTCAACAGTATTGATTTGGTTCAATGTTCCAGTGGTGGTGCACTGGAAAATCTGGGCAAGCTTACAGAGAGAGAAAAACTTGTGCAATTTCTTATGGGACTAAATGATTCTTATGCCACAATTTGCAGTCAAATCCTTGTTATGACCCCATTTCCAACGGTGGAAGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGTTGCATTAGAAACTGTGGCGGCAAAAGTAATCCAAAGCAATTGGCTTCTTAGAAATCAGAGTAGTCGATCCAAAAACGGTGATAATAATCTTGGAATTGATCAAGAAGTTGATAATTCTAACCTTGGATCTCCTATGTGA

Coding sequence (CDS)

ATGGTAAATAATTGGGAGATTGCAATTCTGAAACTTGAGGTACCTAAATTATTGTTCATTCTCCAGAGAATTGAAAGGATAGAAATGGAGGGAAGAGGAATTCTGAGCCCACAAAGATCCCGATTTTCTCCAAAAGTTTACAAAGTGGGTACTCCAGAGCCAAAAATACCGACCAGGAAAGTTCCATCCAAGAAAACAGATAAATCAAAACAAAAACTGGTTCCAAAAACTGCGACTTTACCCTCCTCAAGGCTAAAGCCACCAGCACCATCCACAAATCCTAATCCTAACGACAATAAAAGTAATTTCAATTATGAACCACCTTTCCCAGTTCCAGTTCCAACTCAACCCACCCTGCCTTCGCCTTCTTCAAAGACCAATATTGTAAGAGATTATGGTGCGCCTCCTAATTTTGCGTATTCTCCAAATGGTTCTCCCAAGATTTCGCCCACCTCTGCCTTGGGTCCTACAAAAGATCTCAACACTGTTAATGATCTTAGTGATCATTTGTTACAACGCCTTTCTTTTGACGGTAAAGATCTTGCGGACATCCTCCAAGGAAAGTCGATATATGATTTAATCAGCCCAAAAAAAAAGGAAGAATCTTCTTCTCAAAGCATTGATGGTTGGAGAGTATTTCAAAATTTGAAGGAAATTGCAGCTCATCGGCAAGAAAACTTATCCGTTGAATTTTACTTCAGAAAACTCAAGGCACTATGGGATGAACTTGCATTCAACAGTATTGATTTGGTTCAATGTTCCAGTGGTGGTGCACTGGAAAATCTGGGCAAGCTTACAGAGAGAGAAAAACTTGTGCAATTTCTTATGGGACTAAATGATTCTTATGCCACAATTTGCAGTCAAATCCTTGTTATGACCCCATTTCCAACGGTGGAAGAAGCCTATTCTGAAATAATTGGAGAAGAAAAACGTAGGGAATTGGTTGTTGCATTAGAAACTGTGGCGGCAAAAGTAATCCAAAGCAATTGGCTTCTTAGAAATCAGAGTAGTCGATCCAAAAACGGTGATAATAATCTTGGAATTGATCAAGAAGTTGATAATTCTAACCTTGGATCTCCTATGTGA

Protein sequence

MVNNWEIAILKLEVPKLLFILQRIERIEMEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRLKPPAPSTNPNPNDNKSNFNYEPPFPVPVPTQPTLPSPSSKTNIVRDYGAPPNFAYSPNGSPKISPTSALGPTKDLNTVNDLSDHLLQRLSFDGKDLADILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDNNLGIDQEVDNSNLGSPM
Homology
BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match: A0A0A0LRE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058680 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.2e-56
Identity = 168/379 (44.33%), Postives = 215/379 (56.73%), Query Frame = 0

Query: 29  MEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLP-SSRLKP 88
           M+ RGI+ P+RS+FSPK           P RK    +  KS +K   K    P SS+ KP
Sbjct: 1   MDERGIMGPKRSQFSPK-----------PNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKP 60

Query: 89  PAPSTNPNPNDNKSNFNYE------PPFPVPVPT-------------------------- 148
            A +TNPN N NK+N N E      PP P P+ T                          
Sbjct: 61  QAAATNPNSNGNKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLPHNLSPPR 120

Query: 149 ----QPTLPSPSSKTNIVRDYGAPPNFAYSPNGSPKISPTSA-------LGPTKD----- 208
               QP  PS +SK N VR      +   S    PK SPTS        +  T D     
Sbjct: 121 RSKSQPATPSSASKINFVRRI----DNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPG 180

Query: 209 -LNTVNDLSDHLLQRLSFDGKDLADILQGKSIYDLI-SPKKKEESSSQSIDGWRVFQNLK 268
             ++ +D+ D LLQRLS +GKDL DIL+G +I DL+ S  +KEESSS+++    + Q  +
Sbjct: 181 YSDSSHDIGDRLLQRLSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQ 240

Query: 269 EIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLTEREKLVQFLMG 328
           +IA+HRQ NLSVE YF+KLK LW+++   S + V+      +    +LTER+K++QF +G
Sbjct: 241 KIASHRQGNLSVERYFKKLKKLWNDIGIYSSESVE-----GIAFWSELTERDKVIQFFIG 300

Query: 329 LNDSYATICSQILVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSS 356
           LND Y+ ICSQILV  PFPTVEEAYSEII EEKRREL VAL TVAA+VIQS++    Q+ 
Sbjct: 301 LNDYYSIICSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVIQSSY----QNG 355

BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match: A0A0A0LU31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058670 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 8.4e-53
Identity = 159/355 (44.79%), Postives = 202/355 (56.90%), Query Frame = 0

Query: 26  RIEMEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRL 85
           +I     G   P  +       K    +P  P+   P  K   + +   P + + PSS  
Sbjct: 27  KINSSPNGTKKPTDAEVKNSANKHPEKDPNFPSSSKP--KPQAAARNSNPNSNSAPSSPA 86

Query: 86  KPPA--PSTNPNPNDNKSNFNYEPPFPVPVPT-------QPTLPSPSSKTNIVRDYGAPP 145
            PP   P+T    +   +     PP P P P+       QPT+PS SSK N+VR      
Sbjct: 87  PPPTPIPTTRKTKSQPPTPSPALPPTPSPTPSPTRKTKCQPTMPSSSSKNNVVRRIYND- 146

Query: 146 NFAYSPNGSPKISPTS-------ALGPTKDLNT------VNDLSDHLLQRLSFDGKDLAD 205
               SP  SPKISPTS       A+  T   N+       ND+   LLQ LSF+GKDL D
Sbjct: 147 ---NSPKASPKISPTSGSDCHEKAVKTTAYPNSPASSDPSNDIGHRLLQGLSFEGKDLDD 206

Query: 206 ILQGKSIYDLI-SPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDE 265
           IL+G SI DL+ S  KKEESS +++    + Q  ++IA+HRQ NLSVE YF+KLK LW++
Sbjct: 207 ILKGNSIDDLMGSNNKKEESSPRNVSSLAILQIYQKIASHRQGNLSVERYFKKLKKLWND 266

Query: 266 LAFNSIDLVQ-CSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEA 325
           +   S D  Q  SS G +    +LTER+K++QF +GLND Y+ ICSQILV  PFPTVEEA
Sbjct: 267 IGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFIGLNDYYSIICSQILVNQPFPTVEEA 326

Query: 326 YSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDN-NLGIDQEVDNS 356
           YSEII EEKRREL VAL  +AA+VIQS++    Q   S NGDN NLGIDQE+D S
Sbjct: 327 YSEIIREEKRRELFVALGIMAAQVIQSSY----QYGSSNNGDNKNLGIDQEIDRS 371

BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match: A0A6J1GTG4 (serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456959 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 9.3e-44
Identity = 148/351 (42.17%), Postives = 196/351 (55.84%), Query Frame = 0

Query: 35  LSPQR---SRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPK-TATLPSSRLKPPAP 94
           +SP+R   +  +P   +    EP+    K P+K TD+S     P+   + P+S+L P  P
Sbjct: 36  MSPRRRPTTPINPNELRTHRKEPQPTVVKRPTKPTDRSSNP--PRIDPSRPNSKLAPSRP 95

Query: 95  STNPNPNDNKSNFNYEPP----FPVPVPTQPTLPSPSSKTNIVRDYGAPPNFAY-----S 154
           +  P+PN+ K +    P     F  P PT+P  P   S        G+  +F+      S
Sbjct: 96  AA-PSPNERKLDTKTAPKTTTRFSSPRPTKPITPPSKSNGKGASGSGSRSDFSRAKPSDS 155

Query: 155 PNGSPKISPTSALGPTKDLNTVNDLSD-------------HLLQRLSFDGKDLADI-LQG 214
             G+PK   +  L   +D   V   SD             H L +LS D KDLA+I L  
Sbjct: 156 QKGTPKNLRSGRLNDQQDEQIVRSYSDGSYGARTLSDPDVHKLHQLSLDDKDLANIVLHA 215

Query: 215 KSIYD-LISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDELAFN 274
             +Y+ L S  K+EE SSQ  +  R+FQ  KEIA+H Q N S+  Y  KLKALWDEL   
Sbjct: 216 NLVYESLASETKEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLKALWDELE-A 275

Query: 275 SIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYSEII 334
            ID  +CS  G+ E   +  EREK++QFL+GLNDSY+TIC+QIL M PFPTVE+A   I+
Sbjct: 276 YIDTPKCSC-GSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVEKACCAIL 335

Query: 335 GEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDNNLGIDQEVDNSNL 358
            EEKRRELV++LE VAAKVIQ+NWLL+N    S NGDN     +EVD+ NL
Sbjct: 336 REEKRRELVLSLEIVAAKVIQNNWLLQN--GHSINGDN-----EEVDHMNL 374

BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match: A0A6J1C5Z8 (uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008588 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.0e-43
Identity = 152/389 (39.07%), Postives = 202/389 (51.93%), Query Frame = 0

Query: 28  EMEGRGILSPQRSRFSPKVYKV---GTPEP-------------------KIPTRKVPSKK 87
           +M  RG++SP RSR SP+ ++    G P P                      T + PS  
Sbjct: 46  KMTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSAT 105

Query: 88  TDKSKQKLVPKTATLPSSRLKPPAPSTNPNPND--NKSNFN---------YEPPFPVPVP 147
             ++ +K  P+    P     P  PS  PNPND  N+   +          +P  P   P
Sbjct: 106 ATRATKKSPPRIRPSPKP-TAPIVPSRRPNPNDLHNQKKLDTKTTPKIGGAKPSSPRTQP 165

Query: 148 TQ-------PTLPSPSSKTNIVRDYGAPPNFAYSPNGSP--KISPTSALGPTKDLNTVND 207
            +       P  P+P SK    +   A    + S + SP    SP+S   P+      +D
Sbjct: 166 QRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSPGSAQHHD 225

Query: 208 LSDHL------------------LQRLSFDGKDLAD-ILQGKSIYDLISPKKKEESSSQS 267
           + +H                   LQRLS DGKDLA  IL   SIY+ I     EES   +
Sbjct: 226 MKNHSPYSGGTYTPLADPQLNNHLQRLSIDGKDLASIILHANSIYESIGSDTMEESFQSN 285

Query: 268 IDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLT 327
               R+FQ  K+IA+HRQEN SV  YF KLK LWDEL   S D+ QC S GA+E L    
Sbjct: 286 AP--RIFQIYKDIASHRQENSSVTSYFTKLKILWDELETYSDDVPQCCSCGAMEKLSGHV 345

Query: 328 EREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVI 356
           EREK++QFLMGLN+SY+TIC QIL++ PFPT+E+AYS II EEKR ELV +LE VAAKV+
Sbjct: 346 EREKVMQFLMGLNNSYSTICPQILLIQPFPTMEKAYSIIIREEKRMELVTSLEMVAAKVM 405

BLAST of Lsi02G005680 vs. ExPASy TrEMBL
Match: A0A6J1C7L7 (uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008986 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.3e-24
Identity = 110/321 (34.27%), Postives = 156/321 (48.60%), Query Frame = 0

Query: 28  EMEGRGILSPQRSRF----SPKVYKVGTPEPKIP-----TRKVPSKKTDKSKQKLV---- 87
           +M GRG++SP +SRF    S          P +P     TR+  + +    KQ+      
Sbjct: 3   KMRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTK 62

Query: 88  ---------------PKTATLPSSRLKPPAPSTNPNPNDNKSNFNYEPPFPVPVPTQPTL 147
                          PK   +  SR +P     NPN +++ S           +      
Sbjct: 63  PTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNST--------TKLTIAKIT 122

Query: 148 PSPSSKTNIVRDYGAPPNFAYSPNGS-------PKISPTSALGPTKDLNTV--NDLSDHL 207
            S +S  N V+     P      +GS          +  +  G  +D  TV  +    + 
Sbjct: 123 TSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQ 182

Query: 208 LQRLSFDGKDLAD-ILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSV 267
           LQ+LS DGK  A  + +  S+ + + P  KEE S QS +  R+ +  K+IA+HRQ N S+
Sbjct: 183 LQQLSIDGKHHAKMVFRANSMDESVGPYTKEECSPQS-NAERILEIYKDIASHRQGNSSI 242

Query: 268 EFYFRKLKALWDELAFNSIDLVQCSSGGALENL-GKLTEREKLVQFLMGLNDSYATICSQ 310
             YF KL+ LW+EL   S DL QC S  A +    KL EREK++QFL+GLNDSY+TICSQ
Sbjct: 243 TSYFTKLETLWEELETYS-DLPQCCSYSATDQKPSKLVEREKVMQFLVGLNDSYSTICSQ 302

BLAST of Lsi02G005680 vs. NCBI nr
Match: XP_038895148.1 (proline-rich receptor-like protein kinase PERK2 isoform X1 [Benincasa hispida])

HSP 1 Score: 365.2 bits (936), Expect = 6.7e-97
Identity = 219/358 (61.17%), Postives = 257/358 (71.79%), Query Frame = 0

Query: 29  MEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRLKPP 88
           MEGRGI+SP+RSRFSPK+ K GTP+P  P +    +    SK ++ P    +P+    PP
Sbjct: 1   MEGRGIMSPKRSRFSPKMTKKGTPQPAKPAKNKHPRNVTGSKIEVTP----IPNP--TPP 60

Query: 89  APSTNPNPNDNKSNFNYEPPFPVPVPT-------QPTLPSPSSKTNIVRDYGAP---PNF 148
             +TNP+PN +K+    EP  P+P PT       QPT PS SS TN+VR  G     P+ 
Sbjct: 61  RAATNPSPNHSKTQSRSEPSSPIPPPTPTPTTRSQPTTPS-SSNTNVVRQGGLSFDNPSV 120

Query: 149 A---YSPNGSPKISPTSALGPTKDLN------------TVNDLSDHLLQRLSFDGKDLAD 208
           +   +SP    K SP S LG  KD+N            T +DLSD LLQRLSFDGKD+AD
Sbjct: 121 SKSFHSPKDYHKSSPGSWLGLQKDVNTSPDPSSPASSHTASDLSDRLLQRLSFDGKDVAD 180

Query: 209 ILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDEL 268
           ILQGKSIYD++   KKEE +SQSIDG RV Q  KEIA+HRQENL VE YFRKL ALWDEL
Sbjct: 181 ILQGKSIYDIMGSNKKEE-TSQSIDGLRVLQIYKEIASHRQENLFVEPYFRKLNALWDEL 240

Query: 269 AFNSIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYS 328
           +F   DL QCSSGGA++N+ +LTER+K+VQFL+GLNDSYATIC QILV  PFPTVEEAYS
Sbjct: 241 SFYITDLAQCSSGGAIQNVSELTERQKVVQFLVGLNDSYATICGQILVKRPFPTVEEAYS 300

Query: 329 EIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDNNLGIDQEVDNSNLGSPM 362
           EIIGEEKRRELV ALETVAAKVIQSNWLL+NQ+SRS   +NN GIDQEVDN+NLGSPM
Sbjct: 301 EIIGEEKRRELVAALETVAAKVIQSNWLLKNQNSRS---NNNRGIDQEVDNANLGSPM 347

BLAST of Lsi02G005680 vs. NCBI nr
Match: XP_038895149.1 (proline-rich receptor-like protein kinase PERK2 isoform X2 [Benincasa hispida])

HSP 1 Score: 355.9 bits (912), Expect = 4.1e-94
Identity = 217/358 (60.61%), Postives = 255/358 (71.23%), Query Frame = 0

Query: 29  MEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRLKPP 88
           MEGRGI+SP+RSRFSPK+ K GTP+P  P +    +    SK ++ P    +P+    PP
Sbjct: 1   MEGRGIMSPKRSRFSPKMTKKGTPQPAKPAKNKHPRNVTGSKIEVTP----IPNP--TPP 60

Query: 89  APSTNPNPNDNKSNFNYEPPFPVPVPT-------QPTLPSPSSKTNIVRDYGAP---PNF 148
             +TNP+PN +K+    EP  P+P PT       QPT PS SS TN+VR  G     P+ 
Sbjct: 61  RAATNPSPNHSKTQSRSEPSSPIPPPTPTPTTRSQPTTPS-SSNTNVVRQGGLSFDNPSV 120

Query: 149 A---YSPNGSPKISPTSALGPTKDLN------------TVNDLSDHLLQRLSFDGKDLAD 208
           +   +SP    K SP S LG  KD+N            T +DLSD LLQRLSFD  D+AD
Sbjct: 121 SKSFHSPKDYHKSSPGSWLGLQKDVNTSPDPSSPASSHTASDLSDRLLQRLSFD--DVAD 180

Query: 209 ILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDEL 268
           ILQGKSIYD++   KKEE +SQSIDG RV Q  KEIA+HRQENL VE YFRKL ALWDEL
Sbjct: 181 ILQGKSIYDIMGSNKKEE-TSQSIDGLRVLQIYKEIASHRQENLFVEPYFRKLNALWDEL 240

Query: 269 AFNSIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEAYS 328
           +F   DL QCSSGGA++N+ +LTER+K+VQFL+GLNDSYATIC QILV  PFPTVEEAYS
Sbjct: 241 SFYITDLAQCSSGGAIQNVSELTERQKVVQFLVGLNDSYATICGQILVKRPFPTVEEAYS 300

Query: 329 EIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDNNLGIDQEVDNSNLGSPM 362
           EIIGEEKRRELV ALETVAAKVIQSNWLL+NQ+SRS   +NN GIDQEVDN+NLGSPM
Sbjct: 301 EIIGEEKRRELVAALETVAAKVIQSNWLLKNQNSRS---NNNRGIDQEVDNANLGSPM 345

BLAST of Lsi02G005680 vs. NCBI nr
Match: XP_011652531.1 (protein ENL [Cucumis sativus] >KGN64485.1 hypothetical protein Csa_013433 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 1.3e-55
Identity = 168/379 (44.33%), Postives = 215/379 (56.73%), Query Frame = 0

Query: 29  MEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLP-SSRLKP 88
           M+ RGI+ P+RS+FSPK           P RK    +  KS +K   K    P SS+ KP
Sbjct: 1   MDERGIMGPKRSQFSPK-----------PNRKPIDPEAKKSAKKNPKKDPNFPSSSKPKP 60

Query: 89  PAPSTNPNPNDNKSNFNYE------PPFPVPVPT-------------------------- 148
            A +TNPN N NK+N N E      PP P P+ T                          
Sbjct: 61  QAAATNPNSNGNKTNPNSETPSSAPPPPPTPISTPKAKSQPPTPSSDHHPPLPHNLSPPR 120

Query: 149 ----QPTLPSPSSKTNIVRDYGAPPNFAYSPNGSPKISPTSA-------LGPTKD----- 208
               QP  PS +SK N VR      +   S    PK SPTS        +  T D     
Sbjct: 121 RSKSQPATPSSASKINFVRRI----DNDNSTKAFPKTSPTSGSDHRQKHVKTTADPHSPG 180

Query: 209 -LNTVNDLSDHLLQRLSFDGKDLADILQGKSIYDLI-SPKKKEESSSQSIDGWRVFQNLK 268
             ++ +D+ D LLQRLS +GKDL DIL+G +I DL+ S  +KEESSS+++    + Q  +
Sbjct: 181 YSDSSHDIGDRLLQRLSSEGKDLDDILKGNTIDDLMGSNNRKEESSSRNVSSLAILQIYQ 240

Query: 269 EIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLTEREKLVQFLMG 328
           +IA+HRQ NLSVE YF+KLK LW+++   S + V+      +    +LTER+K++QF +G
Sbjct: 241 KIASHRQGNLSVERYFKKLKKLWNDIGIYSSESVE-----GIAFWSELTERDKVIQFFIG 300

Query: 329 LNDSYATICSQILVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSS 356
           LND Y+ ICSQILV  PFPTVEEAYSEII EEKRREL VAL TVAA+VIQS++    Q+ 
Sbjct: 301 LNDYYSIICSQILVNQPFPTVEEAYSEIIREEKRRELFVALGTVAAQVIQSSY----QNG 355

BLAST of Lsi02G005680 vs. NCBI nr
Match: XP_011648413.2 (probable serine/threonine-protein kinase DDB_G0280111 [Cucumis sativus] >KGN64484.1 hypothetical protein Csa_013846 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 1.7e-52
Identity = 159/355 (44.79%), Postives = 202/355 (56.90%), Query Frame = 0

Query: 26  RIEMEGRGILSPQRSRFSPKVYKVGTPEPKIPTRKVPSKKTDKSKQKLVPKTATLPSSRL 85
           +I     G   P  +       K    +P  P+   P  K   + +   P + + PSS  
Sbjct: 27  KINSSPNGTKKPTDAEVKNSANKHPEKDPNFPSSSKP--KPQAAARNSNPNSNSAPSSPA 86

Query: 86  KPPA--PSTNPNPNDNKSNFNYEPPFPVPVPT-------QPTLPSPSSKTNIVRDYGAPP 145
            PP   P+T    +   +     PP P P P+       QPT+PS SSK N+VR      
Sbjct: 87  PPPTPIPTTRKTKSQPPTPSPALPPTPSPTPSPTRKTKCQPTMPSSSSKNNVVRRIYND- 146

Query: 146 NFAYSPNGSPKISPTS-------ALGPTKDLNT------VNDLSDHLLQRLSFDGKDLAD 205
               SP  SPKISPTS       A+  T   N+       ND+   LLQ LSF+GKDL D
Sbjct: 147 ---NSPKASPKISPTSGSDCHEKAVKTTAYPNSPASSDPSNDIGHRLLQGLSFEGKDLDD 206

Query: 206 ILQGKSIYDLI-SPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSVEFYFRKLKALWDE 265
           IL+G SI DL+ S  KKEESS +++    + Q  ++IA+HRQ NLSVE YF+KLK LW++
Sbjct: 207 ILKGNSIDDLMGSNNKKEESSPRNVSSLAILQIYQKIASHRQGNLSVERYFKKLKKLWND 266

Query: 266 LAFNSIDLVQ-CSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQILVMTPFPTVEEA 325
           +   S D  Q  SS G +    +LTER+K++QF +GLND Y+ ICSQILV  PFPTVEEA
Sbjct: 267 IGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFIGLNDYYSIICSQILVNQPFPTVEEA 326

Query: 326 YSEIIGEEKRRELVVALETVAAKVIQSNWLLRNQSSRSKNGDN-NLGIDQEVDNS 356
           YSEII EEKRREL VAL  +AA+VIQS++    Q   S NGDN NLGIDQE+D S
Sbjct: 327 YSEIIREEKRRELFVALGIMAAQVIQSSY----QYGSSNNGDNKNLGIDQEIDRS 371

BLAST of Lsi02G005680 vs. NCBI nr
Match: XP_038895286.1 (hybrid signal transduction histidine kinase L-like isoform X2 [Benincasa hispida])

HSP 1 Score: 217.6 bits (553), Expect = 1.7e-52
Identity = 163/369 (44.17%), Postives = 208/369 (56.37%), Query Frame = 0

Query: 32  RGILSPQRSRFS------------PKVYKVGTPEPKIPTRKVPSK-------KTDKSKQK 91
           RGILSP R++FS            P        E   PT   P+K        ++ +  +
Sbjct: 4   RGILSPPRTKFSSSRNNSNNAASKPNELSKNLREETKPTTIRPTKNNNGNGRSSNNNTSR 63

Query: 92  LVPKTATLPSSRLKPPAPSTNPNPN---DNKSNFNY-----EPPFPVPVPTQPTLPSPSS 151
           + P  +T      +P   ++NPN     D  S          P  P PV T  T P+P+S
Sbjct: 64  INPSKSTSKLVSSRPKTATSNPNGQKKLDKNSTTKIISKPSSPRTPKPV-THQTRPTPNS 123

Query: 152 KTNIVR------------DYGAPPNFAYSPNGSPKISPTSALGPTKDLNTVNDL--SDHL 211
           K N+                     + +S NGSP    ++         T++DL  SD  
Sbjct: 124 KRNVKNRIASCSGSRSELSSAGKNKYFHSRNGSPNDLGSNHRYSAGHYATLHDLHVSDQ- 183

Query: 212 LQRLSFDGKDLAD-ILQGKSIYDLISPKKKEESSSQSIDGWRVFQNLKEIAAHRQENLSV 271
           LQRLS DGKDLA  +L   SIY+ +    KE SSSQS D  R+FQ  KEIA HRQEN S+
Sbjct: 184 LQRLSIDGKDLAGMVLHPNSIYESMGSDTKEASSSQSNDS-RMFQIYKEIAFHRQENSSI 243

Query: 272 EFYFRKLKALWDELAFNSIDLVQCSSGGALENLGKLTEREKLVQFLMGLNDSYATICSQI 331
             YF KL+ALWDELA    DL+QCS GGA E L +  EREK++QFL+GLNDSY+ IC+QI
Sbjct: 244 TSYFTKLEALWDELATFKTDLLQCSCGGATEKLSEYMEREKVMQFLVGLNDSYSKICNQI 303

Query: 332 LVMTPFPTVEEAYSEIIGEEKRRELVVALETVAAKVIQSNWL-LRNQSSR-SKNGDNNLG 357
           L+ TPFPT+E+AYS +I EEK RELVV LE+VA KVIQ+NWL L+NQ++  S NGDNN G
Sbjct: 304 LLSTPFPTMEKAYSAVIREEKHRELVVELESVAGKVIQNNWLDLQNQNAHSSNNGDNNDG 363

BLAST of Lsi02G005680 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 4.4e-06
Identity = 30/101 (29.70%), Postives = 54/101 (53.47%), Query Frame = 0

Query: 211 RVFQNLKEIAAHRQENLSVEFYFRKLKALWDELAFNSIDLVQCSSGG----ALENLGKLT 270
           +++Q  + +A  RQ   SVE YF KL  +W EL+     + +C  GG      +   +  
Sbjct: 126 KIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELS-EYAPIPECKCGGCNCECTKRAEEAR 185

Query: 271 EREKLVQFLMG--LNDSYATICSQILVMTPFPTVEEAYSEI 306
           E+E+  +FLMG  LN  +  + ++I+   P P++ EA++ +
Sbjct: 186 EKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMV 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LRE66.2e-5644.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058680 PE=4 SV=1[more]
A0A0A0LU318.4e-5344.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058670 PE=4 SV=1[more]
A0A6J1GTG49.3e-4442.17serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1C5Z86.0e-4339.07uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1C7L76.3e-2434.27uncharacterized protein LOC111008986 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
Match NameE-valueIdentityDescription
XP_038895148.16.7e-9761.17proline-rich receptor-like protein kinase PERK2 isoform X1 [Benincasa hispida][more]
XP_038895149.14.1e-9460.61proline-rich receptor-like protein kinase PERK2 isoform X2 [Benincasa hispida][more]
XP_011652531.11.3e-5544.33protein ENL [Cucumis sativus] >KGN64485.1 hypothetical protein Csa_013433 [Cucum... [more]
XP_011648413.21.7e-5244.79probable serine/threonine-protein kinase DDB_G0280111 [Cucumis sativus] >KGN6448... [more]
XP_038895286.11.7e-5244.17hybrid signal transduction histidine kinase L-like isoform X2 [Benincasa hispida... [more]
Match NameE-valueIdentityDescription
AT1G21280.14.4e-0629.70CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..72
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 208..320
NoneNo IPR availablePANTHERPTHR34222:SF6OS02G0671800 PROTEINcoord: 208..320

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G005680.1Lsi02G005680.1mRNA