Lsi02G003550 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTAGCAGATGTGATGGCTAATTCCAGCTCCTCGTCTCATCATAATGTGGCTGATTCAAGCTTGAAGAGGAAGAGGAGAGAAGCACGAGAGGTTCGCCGGAAAGTTCAGAAGCTCCGGTGGGTGGTGCCCGGTGGTCGAGGGTTGCGACGAGAACATCTCTTCGCCAAAACAGCTCATTATATATTGCATTTGAGATTGAAAGTTTGTGCTCTTGAAACTGTTCTCAAATTGCAGGAAGAGGCTTGA ATGGCTTTAGCAGATGTGATGGCTAATTCCAGCTCCTCGTCTCATCATAATGTGGCTGATTCAAGCTTGAAGAGGAAGAGGAGAGAAGCACGAGAGGTTCGCCGGAAAGTTCAGAAGCTCCGGTGGGTGGTGCCCGGTGGTCGAGGGTTGCGACGAGAACATCTCTTCGCCAAAACAGCTCATTATATATTGCATTTGAGATTGAAAGTTTGTGCTCTTGAAACTGTTCTCAAATTGCAGGAAGAGGCTTGA ATGGCTTTAGCAGATGTGATGGCTAATTCCAGCTCCTCGTCTCATCATAATGTGGCTGATTCAAGCTTGAAGAGGAAGAGGAGAGAAGCACGAGAGGTTCGCCGGAAAGTTCAGAAGCTCCGGTGGGTGGTGCCCGGTGGTCGAGGGTTGCGACGAGAACATCTCTTCGCCAAAACAGCTCATTATATATTGCATTTGAGATTGAAAGTTTGTGCTCTTGAAACTGTTCTCAAATTGCAGGAAGAGGCTTGA MALADVMANSSSSSHHNVADSSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAHYILHLRLKVCALETVLKLQEEA Homology
BLAST of Lsi02G003550 vs. ExPASy TrEMBL
Match: A0A5A7UGX9 (Transcription factor PAR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003490 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.7e-28 Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of Lsi02G003550 vs. ExPASy TrEMBL
Match: A0A5N6RR97 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_019086 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07 Identity = 34/57 (59.65%), Postives = 47/57 (82.46%), Query Frame = 0
BLAST of Lsi02G003550 vs. ExPASy TrEMBL
Match: A0A0A0LQU9 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045930 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.6e-07 Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of Lsi02G003550 vs. ExPASy TrEMBL
Match: A0A438EHL0 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_070132 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06 Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 0
BLAST of Lsi02G003550 vs. ExPASy TrEMBL
Match: A0A438JND2 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_016970 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06 Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 0
BLAST of Lsi02G003550 vs. NCBI nr
Match: KAA0055213.1 (transcription factor PAR1-like [Cucumis melo var. makuwa] >TYJ99143.1 transcription factor PAR1-like [Cucumis melo var. makuwa]) HSP 1 Score: 133.7 bits (335), Expect = 7.6e-28 Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of Lsi02G003550 vs. NCBI nr
Match: KAG7019830.1 (hypothetical protein SDJN02_18794, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 114.8 bits (286), Expect = 3.6e-22 Identity = 60/72 (83.33%), Postives = 67/72 (93.06%), Query Frame = 0
BLAST of Lsi02G003550 vs. NCBI nr
Match: KAG6584233.1 (hypothetical protein SDJN03_20165, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114.8 bits (286), Expect = 3.6e-22 Identity = 60/72 (83.33%), Postives = 67/72 (93.06%), Query Frame = 0
BLAST of Lsi02G003550 vs. NCBI nr
Match: KAG6573044.1 (Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.4 bits (228), Expect = 1.9e-15 Identity = 53/79 (67.09%), Postives = 60/79 (75.95%), Query Frame = 0
BLAST of Lsi02G003550 vs. NCBI nr
Match: KAE8124179.1 (hypothetical protein FH972_019086 [Carpinus fangiana]) HSP 1 Score: 64.7 bits (156), Expect = 4.3e-07 Identity = 34/57 (59.65%), Postives = 47/57 (82.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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