Lsi02G001120 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTGCATGATCTGAGTTCAGTAGATCGCAATTTCGCTGCTCCCAGAAATGGGGACGATTCTCCAAGCAGTTTACAGTGCCTCAGACCCTTTGTCGCCTATTGGGAGTTTTTCATCTCAGCCCAATGGGGACAACCGGGGACTCACTTCCGTCACTTCCGCCTCCGGTTGCCATGGAATGTGGTATAGTGCTCTCTTGGTTGCGCCCTCGGTTTTGTTCGCCATCTATTTGGCGATTAGTGCCATCAAGAACATGAAGAAGTATTTTCTTGGTCGGTCGTTTATAATGATGTCGTATTATGCCCTTCTCTGGATCACTACGCTCCTAAATCTTGCTTGGTGCTCTCTTCAGGTGAGGTGGACTTTAACGAAGTATAGTTTGCTTTGATTTAATGAGCTCTCTTGCACGACGGTAATATAGGATTTGTGTGTCGGGTACCTGCACATAATAATTCGTTTTTCATTTTGAGTTTATTCCTAAACAGAGCCTAGTTGCATCCAACCACAACAACTTGGTCTTCAAATCCTTGTTGATCCCATGGAAACCTGAAGACAAAGCCATCTGA ATGGAAATGGGGACGATTCTCCAAGCAGTTTACAGTGCCTCAGACCCTTTGTCGCCTATTGGGAGTTTTTCATCTCAGCCCAATGGGGACAACCGGGGACTCACTTCCGTCACTTCCGCCTCCGGTTGCCATGGAATGTGGTATAGTGCTCTCTTGGTTGCGCCCTCGGTTTTGTTCGCCATCTATTTGGCGATTAGTGCCATCAAGAACATGAAGAAGTATTTTCTTGGTCGGTCGTTTATAATGATGTCGTATTATGCCCTTCTCTGGATCACTACGCTCCTAAATCTTGCTTGGTGCTCTCTTCAGAGCCTAGTTGCATCCAACCACAACAACTTGGTCTTCAAATCCTTGTTGATCCCATGGAAACCTGAAGACAAAGCCATCTGA ATGGAAATGGGGACGATTCTCCAAGCAGTTTACAGTGCCTCAGACCCTTTGTCGCCTATTGGGAGTTTTTCATCTCAGCCCAATGGGGACAACCGGGGACTCACTTCCGTCACTTCCGCCTCCGGTTGCCATGGAATGTGGTATAGTGCTCTCTTGGTTGCGCCCTCGGTTTTGTTCGCCATCTATTTGGCGATTAGTGCCATCAAGAACATGAAGAAGTATTTTCTTGGTCGGTCGTTTATAATGATGTCGTATTATGCCCTTCTCTGGATCACTACGCTCCTAAATCTTGCTTGGTGCTCTCTTCAGAGCCTAGTTGCATCCAACCACAACAACTTGGTCTTCAAATCCTTGTTGATCCCATGGAAACCTGAAGACAAAGCCATCTGA MEMGTILQAVYSASDPLSPIGSFSSQPNGDNRGLTSVTSASGCHGMWYSALLVAPSVLFAIYLAISAIKNMKKYFLGRSFIMMSYYALLWITTLLNLAWCSLQSLVASNHNNLVFKSLLIPWKPEDKAI Homology
BLAST of Lsi02G001120 vs. ExPASy Swiss-Prot
Match: Q94AH1 (Protein CANDIDATE G-PROTEIN COUPLED RECEPTOR 2 OS=Arabidopsis thaliana OX=3702 GN=CAND2 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.9e-10 Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = 0
BLAST of Lsi02G001120 vs. ExPASy Swiss-Prot
Match: F4K2U8 (Protein CANDIDATE G-PROTEIN COUPLED RECEPTOR 8 OS=Arabidopsis thaliana OX=3702 GN=CAND8 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.7e-10 Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 0
BLAST of Lsi02G001120 vs. ExPASy TrEMBL
Match: A0A0A0LSU2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039110 PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.5e-36 Identity = 85/101 (84.16%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Lsi02G001120 vs. ExPASy TrEMBL
Match: A0A5D3BL77 (Transmembrane protein adipocyte-associated 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001280 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 9.7e-36 Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0
BLAST of Lsi02G001120 vs. ExPASy TrEMBL
Match: A0A1S3BKM5 (transmembrane protein adipocyte-associated 1 homolog OS=Cucumis melo OX=3656 GN=LOC103490687 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 9.7e-36 Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0
BLAST of Lsi02G001120 vs. ExPASy TrEMBL
Match: A0A6J1EDV1 (uncharacterized protein LOC111431639 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431639 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.4e-34 Identity = 82/116 (70.69%), Postives = 93/116 (80.17%), Query Frame = 0
BLAST of Lsi02G001120 vs. ExPASy TrEMBL
Match: A0A6J1E884 (uncharacterized protein LOC111431639 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431639 PE=3 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 9.1e-34 Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0
BLAST of Lsi02G001120 vs. NCBI nr
Match: XP_004137428.1 (protein CANDIDATE G-PROTEIN COUPLED RECEPTOR 2 [Cucumis sativus] >KGN64044.1 hypothetical protein Csa_013150 [Cucumis sativus]) HSP 1 Score: 162.2 bits (409), Expect = 3.1e-36 Identity = 85/101 (84.16%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Lsi02G001120 vs. NCBI nr
Match: XP_008448577.1 (PREDICTED: transmembrane protein adipocyte-associated 1 homolog [Cucumis melo]) HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35 Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0
BLAST of Lsi02G001120 vs. NCBI nr
Match: TYJ98928.1 (transmembrane protein adipocyte-associated 1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35 Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0
BLAST of Lsi02G001120 vs. NCBI nr
Match: XP_023519639.1 (uncharacterized protein LOC111783005 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 156.4 bits (394), Expect = 1.7e-34 Identity = 83/116 (71.55%), Postives = 94/116 (81.03%), Query Frame = 0
BLAST of Lsi02G001120 vs. NCBI nr
Match: XP_023519638.1 (uncharacterized protein LOC111783005 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 155.2 bits (391), Expect = 3.8e-34 Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 0
BLAST of Lsi02G001120 vs. TAIR 10
Match: AT3G05010.1 (Protein of unknown function, transmembrane-40 ) HSP 1 Score: 65.9 bits (159), Expect = 2.8e-11 Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = 0
BLAST of Lsi02G001120 vs. TAIR 10
Match: AT5G27210.1 (Protein of unknown function, transmembrane-40 ) HSP 1 Score: 65.1 bits (157), Expect = 4.8e-11 Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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