Lsi02G000060 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGGTATGATTCTCAAGCTTTCAAAACTCCCCATCAAAATTTAAAATAGCCTACCTTCATGCCTTCTTATAAAAAATTTTATTCTCGTAAACGAGGGGCTTCTTTATTATCAAAGGATGCTGATTTTAATCCTGATGTAATTCAAATTTGCTACACTCTTGCCCAAATTCCAGCACTAATTAGGAAACAACCCGAGATTTCTTGCTCCAATCTTACTGTCACTAGATCGACTATTCCAATTATGAATGGAAAATTCAATTTAACGAGGGAAGTTCTAGCCATTGCAAGTCCAAAAAGTCATGTGATAGAGGAAGATTCAGATTACGACTCTTTGGCAAGTGTTAGTAGTGAAGAACTAGAAAGTTTGGTCCTAGACTCAACCTCAGAATATGATTATGTTCTTTTCGGAAAAGAGGTTGCAAATCTCTTTCAAACTACTTGCAAATAGTCACCACAGTTGCTTTCTTGTAAGTTCTCCTTGCTTAAATCTCATGAAATCCCATCAAAGTTTTCCTCATTAATTGAAGCTTGCAGCCTCATTAATTGAAGCTTGCGGTTTGAAGCTCGGAAGGGTTATTCATCACAATTCACTTTAATTTTGATGGAAATTGGAATCTCAATATTTCTGCTATATCCAGAAGAGTTTTGTGGTTGTTCTCTGAAGTTGTAGGTTTTGTTTAATTTGGTTCAAAGAGTTCGATTCTGATTTTCTTTTTTAGAAGATTGCTTAAGGAAGATGATATTTAGGAATTTCAGCAACTTCTTATGGATCTATCAAATAAATCCCTTGGGATTTTGCCAGACTCAAGATGCTGGTCCATGGAATCTTCTAGTAAATTTTTGGTTGAATCCCTTTTTTGAAGCTTGGTTGCCGAGGACAATATGGCCAAAGAAGAGTATAAAATTCTATGGAAGTCAAATAGTCCTAAAAGAATCAATGTTCTTATTTGGATTATGCTGTATGGTTCCTTAAATTGTTCTTCAACACTTCAAAGGAAAGCAACCAGATCATTACTTATCTCCATTCATAAGCCCCCTATGCAAGGCTGATTGTGAAGACTTCCAACACCTATTCTGTGATTTCAGCTATTCCTTTGCATGCTGGAAAAAGCTTATGTCCATTTTTCATGTAAACCGGGTCTTCTGCAAATCCTTATGTGCCCTTTGTGTCTAGCAAATGAAGAGAACTGACAGCACCGATCAACCTAGTTGAGATATCTGAACGCACTCACTGATCCATATTTTGGTTGTTCCTTTGCTCTCGTATCATTTTTGTAATTTGAGCATTAGTCTCATTTCATTATATCAATGAAGAGACTCGTTTCCTTTAAAAAAAAAAAGAAAGAACTTACAACACCTATTTTTTAAATGTTCTTATACAAGCAAAGGTTGGTGGAAGCTCAGATTTTGGTAGAGGGAATATGCATCAAATTTTGGTTGACCCTCTCCTATCTTCTAAAGCTCAGATTCTTTGGTCTAATGTCGTTAAAGCTTTAATTTCAGAAATTTGGTTTGAACGAAATCAAAGAATATTTCATGATAAAACTTTGGATTGGACGGATCGACTCGGATCTACTCGACTACTTGCTTTTTCATGGGGTTCCCAATCGAAGATTTTTTTTTGAATATTCTATACAAGATATTTGTCTTAATTGGAACACTTTTGTTTTTTCTATATAATCATGTACTAGCTTTATCCAGCAAATTTCTTTTGTATAAGGACATGATGAGGGTGCTATGGTTGTGTTAACCTTGAGATAATCGGGTGCACCTACTGATCCTAGGACTTCTTTGACTTGTTTGTACCTTTTCTCTTTTGTTTCTTGTTCTTTGAGCATTAGTCTCTTTTCATATGTTTCTATTTCAAAAAAAAATTCATGTAGTTCTTTCACATTAAGATCTTTATGAGTAACACAAGTTTCCTGTATCTCGTCTAGTCTAGGCCATTCTATTCTCGTCTAGTCTTTTTAGTCTTATTGTTGTTGTTGTAGCTTCTATTTGATATTTTGTTATGTTGTTATTCTTGTTGTTGCTCTTTTTACTCTTTTTGGATTGCTTTGTCAGTTAGTTAGTTTGTTTGGTTTTCTTGGAGAGGTTTGGATTAGGGGTGTCATCCTTGTTCCTGGGTGCACCTTCTGATCCTTAGGTCTATTTTTTGAATATCTCTTTTTGTACTTCGAGCATTAGTCTCATTTCATTAATTTAATAAACGAGGCTTGTTTCCGTTTCAAAAAAAAAAACACAAGTTTCCTGTAAAAATAAAAATACCACTTTTCTGATGAACAAAACATAATTATCATTAACTCAAGGTTCATGAATAAGTTATTGTCCAATAATGAGCAAGGACTTCCTATCTTTGCAGATCAATGATCTTGCAGATATTGCACGCTGTTCAGCAAATACACCTCTGGGTGATGATTGCTCGATGCAATATCTACTAACATGCCTTGAAGACTTGAGAGTTGTCATTAACCGCAGGAAGTTTAATGCGCTGACAGTTGACACTTTTGGCACTCGCATTGAAAAGTTAATCCGGTCTGTAGCTTTGCAGTATAAATTTGATTTTCAAAGTAATATGCACTTTACCACATGTTGGCATTCTATTGTCAACTTCTCTAATGACTCCCATCATGCCAAATTTCTTTTTAATGTTCTCTCAAATGTGTATACTGCCCAGATTTCTCTTGACTTTTGATGGTTGGTGATTTCACAGGGAGAAGTATTTGCAACTTTGTGAGCTGGTGGATGATGAAAAGATTGACATAGCAAGTACTGTTATTGATGAAGATACTCCTCTTGAAGATGACATTGTTCGTAGCTTAAGAACTAGTCCCATCCATTCTTCAAAGGACCGTACATCAATTGATGACTTTGAGATTATAAAACCAATCAGCCGTGGGGCATTTGGTCGCGTTTTCCTCGCAAAAAAGAGGACAACGGGGGACCTTTTTGCAATAAAGGTTAATTTTCACACTGATGCTTAAATAATGTTCCCAGCATTTTACCTTATTTTTTGGCCTCTTTGCAATAAAGGTTAATTTTCACACTGATGGTTAAATAATGTTCCCAGCATTTTACCTTATTTTTTGGCCTCTTCTTCTACTACCTTATACTTTCAATATTGCATGGAATATAATATTCTTAGCCTGTAGTAATATTGCATGGAAGATAATATTCTTAGCCTGTAGTGCATGTATACTATTTCTCTACATTTGAAAGTGGTAAATTGAAATTAATTACCAAAAATGATATGGAAGCATAAGAAGCTGTCCCATCAATTAAGGATTTGAGCAGGATACCCTAATTTACCTTAATCCTACTACATCATTCTATCTCTAAAAAAAAAGGCTAAATTTCCTCCAATATTTTAGTTTGGTTCGTTTCTTAGCTTCTTTTGGTATTCTCTTTGTAAGCTTTTGGTGCTTCTTAGTTGTAGGCTTTTCATCTTATTTGACTTGTACTATTCATCCATTGTGATTGTCTTTCTATTTGTTTGCTTTTCATCTTATCAATGAAAAACTATCGTTTCCTTTTAAAAAAAATCTTCTTGATTTCATACACAAGAGGAGACAAATCATTGTTATCTGATTTGTCATAGAAAAAAGTCAGGAATGAGACTCTTTTCATTTGTTTTCCTTCTTTCTTCATATTCAGCAGACCACTTCTTGATGTCTTCCTTCAATTTTCTAAGTTTAGATTTAATCACAAATCATTCCTATCCTTGTATTTTTCACCATGGCCATGTGAATCAGATTGTTTCTTTGAAAAGGAAACCAGTTTCTTTCATTGATATAATGAAGTGAGATTAATGCTCATAGTAAACCAGATTGTTCTTATAACATGTCATTCCATCTGTAAGGAATTATAGGACCTGGATTTATTGAGTTTTTATGTGAGCAACACCAGGTTCTGAAGAAAGCTGATATGATTCGGAAGAATGCCGTTGAAAGTATTTTGGCCGAACGTGATATTTTAATTTCTGTGCGCAACCCTTTTGTGGTGAGCTTGTCTATTTGGTCGTGTAAGTTATGCCTCATTTTCTTTTTGGTTTTGTTTTAACTGTAAAGTTAATTGTATCAGGTTCGCTTCTTCTACTCTTTTACTTGTCGTGACAATTTGTATCTTGTGATGGAGTATTTGAACGGAGGAGACCTTTACTCCTTGTTGAGAAATTTGGGCTGCTTAGATGAAGAGGTTGCTCGTGTATATATCGCAGAAGTTGTATGTATATGTTCCTTTTCATCTTTCATTAGGTCTGCAAAGTGAACAGTTATTAGTATTGCAAGCTAAATATTTGCTCGTTTCTTTAACTTTTCAGGTTCTTGCTTTGGAGTATTTGCATTCACTTGGGGTAGTTCATCGGGACTTAAAGCCTGATAATTTATTAATAGCACATGATGGTCATATTAAGGTAAATCAATAATGATGAATATGTTTGCTCTAATAACTTATTCAGGATAATTATAATAATTGGGAGGCCTTTATTTAATAACTTAAAGCCTGATAATATGTTTGCTCTTATCCGCCTCAAAATGGTGTTCTTCCTCGTCCTGTATCTTCGCTGATTATTCAAGTAATGATATTTGTAATAATTGGGAGGCCATTATGTGAGTTTAAGGCTTTGGTTTTTCTTATTGCTTTATGTTTCTCTTTAGTGTACGGTGTACCTTTAATAGTATTGTTCTTTATGTTGTTTTCTTTTTCGAATCTTCTCAACTCTCAGTAAAAAATTCCTTTATTCTTAAAAAAATGCATTTAATTACCATCACTGAAATTTCAGCTTATCATAAAAATGGAAATAAAAATAATTCTTTGTTACTTACAGAACTATTTTGCTTCAAGCAGCTGACAGATTTTGGGCTTTCCAAGGTTGGTCTAATCAACAGTACTGATGATTTGTCTGGACCAGCTGTTAGCGGGACCACTCTTCTTGGCTATGATGAACCTACAATGTCTGCTTCTGAGCATCAACAAGAAAGACGGAAAAAGCGTTCTGCTGTTGGCACACCAGACTATTTGGCACCAGAGATACTATTGGGAACTGGACACGGTTCGCATAGACCACCTTTCTTTCTTTCTTCTTCTTCCTTTTTTTTTTAA ATGGAAAGGGAGAAGTATTTGCAACTTTGTGAGCTGGTGGATGATGAAAAGATTGACATAGCAAGTACTGTTATTGATGAAGATACTCCTCTTGAAGATGACATTGTTCGTAGCTTAAGAACTAGTCCCATCCATTCTTCAAAGGACCGTACATCAATTGATGACTTTGAGATTATAAAACCAATCAGCCGTGGGGCATTTGGTCGCGTTTTCCTCGCAAAAAAGAGGACAACGGGGGACCTTTTTGCAATAAAGGTTCTTGCTTTGGAGTATTTGCATTCACTTGGGGTAGTTCATCGGGACTTAAAGCCTGATAATTTATTAATAGCACATGATGGTCATATTAAGCTGACAGATTTTGGGCTTTCCAAGGTTGGTCTAATCAACAGTACTGATGATTTGTCTGGACCAGCTGTTAGCGGGACCACTCTTCTTGGCTATGATGAACCTACAATGTCTGCTTCTGAGCATCAACAAGAAAGACGGAAAAAGCGTTCTGCTGTTGGCACACCAGACTATTTGGCACCAGAGATACTATTGGGAACTGGACACGGTTCGCATAGACCACCTTTCTTTCTTTCTTCTTCTTCCTTTTTTTTTTAA ATGGAAAGGGAGAAGTATTTGCAACTTTGTGAGCTGGTGGATGATGAAAAGATTGACATAGCAAGTACTGTTATTGATGAAGATACTCCTCTTGAAGATGACATTGTTCGTAGCTTAAGAACTAGTCCCATCCATTCTTCAAAGGACCGTACATCAATTGATGACTTTGAGATTATAAAACCAATCAGCCGTGGGGCATTTGGTCGCGTTTTCCTCGCAAAAAAGAGGACAACGGGGGACCTTTTTGCAATAAAGGTTCTTGCTTTGGAGTATTTGCATTCACTTGGGGTAGTTCATCGGGACTTAAAGCCTGATAATTTATTAATAGCACATGATGGTCATATTAAGCTGACAGATTTTGGGCTTTCCAAGGTTGGTCTAATCAACAGTACTGATGATTTGTCTGGACCAGCTGTTAGCGGGACCACTCTTCTTGGCTATGATGAACCTACAATGTCTGCTTCTGAGCATCAACAAGAAAGACGGAAAAAGCGTTCTGCTGTTGGCACACCAGACTATTTGGCACCAGAGATACTATTGGGAACTGGACACGGTTCGCATAGACCACCTTTCTTTCTTTCTTCTTCTTCCTTTTTTTTTTAA MEREKYLQLCELVDDEKIDIASTVIDEDTPLEDDIVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGYDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGSHRPPFFLSSSSFFF Homology
BLAST of Lsi02G000060 vs. ExPASy Swiss-Prot
Match: F4J6F6 (Probable serine/threonine protein kinase IREH1 OS=Arabidopsis thaliana OX=3702 GN=IREH1 PE=1 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 9.3e-75 Identity = 158/262 (60.31%), Postives = 172/262 (65.65%), Query Frame = 0
BLAST of Lsi02G000060 vs. ExPASy Swiss-Prot
Match: F4HYG2 (Probable serine/threonine protein kinase IRE3 OS=Arabidopsis thaliana OX=3702 GN=IRE3 PE=2 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.3e-60 Identity = 138/262 (52.67%), Postives = 155/262 (59.16%), Query Frame = 0
BLAST of Lsi02G000060 vs. ExPASy Swiss-Prot
Match: Q9LE81 (Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 3.1e-54 Identity = 127/264 (48.11%), Postives = 153/264 (57.95%), Query Frame = 0
BLAST of Lsi02G000060 vs. ExPASy Swiss-Prot
Match: F4HPN2 (Probable serine/threonine protein kinase IRE4 OS=Arabidopsis thaliana OX=3702 GN=IRE4 PE=2 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 8.2e-39 Identity = 114/262 (43.51%), Postives = 133/262 (50.76%), Query Frame = 0
BLAST of Lsi02G000060 vs. ExPASy Swiss-Prot
Match: Q559T8 (Probable serine/threonine-protein kinase DDB_G0272282 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0272282 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 8.8e-25 Identity = 91/262 (34.73%), Postives = 109/262 (41.60%), Query Frame = 0
BLAST of Lsi02G000060 vs. ExPASy TrEMBL
Match: A0A0A0LSH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031190 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 3.2e-86 Identity = 183/262 (69.85%), Postives = 184/262 (70.23%), Query Frame = 0
BLAST of Lsi02G000060 vs. ExPASy TrEMBL
Match: A0A1S3B6M3 (probable serine/threonine protein kinase IREH1 OS=Cucumis melo OX=3656 GN=LOC103486458 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 5.4e-86 Identity = 182/262 (69.47%), Postives = 184/262 (70.23%), Query Frame = 0
BLAST of Lsi02G000060 vs. ExPASy TrEMBL
Match: A0A5A7T3G6 (Putative serine/threonine protein kinase IREH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00120 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 7.1e-86 Identity = 182/261 (69.73%), Postives = 183/261 (70.11%), Query Frame = 0
BLAST of Lsi02G000060 vs. ExPASy TrEMBL
Match: A0A6P6G6I4 (probable serine/threonine protein kinase IREH1 isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107419344 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 6.0e-85 Identity = 171/216 (79.17%), Postives = 177/216 (81.94%), Query Frame = 0
BLAST of Lsi02G000060 vs. ExPASy TrEMBL
Match: A0A6J1C754 (probable serine/threonine protein kinase IREH1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008863 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.9e-84 Identity = 178/262 (67.94%), Postives = 180/262 (68.70%), Query Frame = 0
BLAST of Lsi02G000060 vs. NCBI nr
Match: XP_011649519.1 (probable serine/threonine protein kinase IREH1 [Cucumis sativus] >KAE8652490.1 hypothetical protein Csa_013146 [Cucumis sativus]) HSP 1 Score: 327.8 bits (839), Expect = 6.6e-86 Identity = 183/262 (69.85%), Postives = 184/262 (70.23%), Query Frame = 0
BLAST of Lsi02G000060 vs. NCBI nr
Match: XP_008443041.1 (PREDICTED: probable serine/threonine protein kinase IREH1 [Cucumis melo]) HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85 Identity = 182/262 (69.47%), Postives = 184/262 (70.23%), Query Frame = 0
BLAST of Lsi02G000060 vs. NCBI nr
Match: KAA0036025.1 (putative serine/threonine protein kinase IREH1 [Cucumis melo var. makuwa]) HSP 1 Score: 326.6 bits (836), Expect = 1.5e-85 Identity = 182/261 (69.73%), Postives = 183/261 (70.11%), Query Frame = 0
BLAST of Lsi02G000060 vs. NCBI nr
Match: XP_038893957.1 (probable serine/threonine protein kinase IREH1 isoform X2 [Benincasa hispida]) HSP 1 Score: 324.7 bits (831), Expect = 5.6e-85 Identity = 181/262 (69.08%), Postives = 183/262 (69.85%), Query Frame = 0
BLAST of Lsi02G000060 vs. NCBI nr
Match: XP_038893956.1 (probable serine/threonine protein kinase IREH1 isoform X1 [Benincasa hispida]) HSP 1 Score: 324.7 bits (831), Expect = 5.6e-85 Identity = 181/262 (69.08%), Postives = 183/262 (69.85%), Query Frame = 0
BLAST of Lsi02G000060 vs. TAIR 10
Match: AT3G17850.1 (Protein kinase superfamily protein ) HSP 1 Score: 281.2 bits (718), Expect = 6.6e-76 Identity = 158/262 (60.31%), Postives = 172/262 (65.65%), Query Frame = 0
BLAST of Lsi02G000060 vs. TAIR 10
Match: AT1G48490.1 (Protein kinase superfamily protein ) HSP 1 Score: 234.2 bits (596), Expect = 9.2e-62 Identity = 138/262 (52.67%), Postives = 155/262 (59.16%), Query Frame = 0
BLAST of Lsi02G000060 vs. TAIR 10
Match: AT1G48490.2 (Protein kinase superfamily protein ) HSP 1 Score: 234.2 bits (596), Expect = 9.2e-62 Identity = 138/262 (52.67%), Postives = 155/262 (59.16%), Query Frame = 0
BLAST of Lsi02G000060 vs. TAIR 10
Match: AT1G48490.3 (Protein kinase superfamily protein ) HSP 1 Score: 234.2 bits (596), Expect = 9.2e-62 Identity = 138/262 (52.67%), Postives = 155/262 (59.16%), Query Frame = 0
BLAST of Lsi02G000060 vs. TAIR 10
Match: AT5G62310.1 (AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein ) HSP 1 Score: 213.0 bits (541), Expect = 2.2e-55 Identity = 127/264 (48.11%), Postives = 153/264 (57.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|