Lsi01G019570 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G019570
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Fatty acyl-CoA reductase
Location	chr01: 25425450 .. 25427187 (-)
RNA-Seq Expression	Lsi01G019570
Synteny	Lsi01G019570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGGTTCCAGCAGACATGGTCGTGAATGCGACATTAGCGGCAATGGCAAGGCATGGAAGAGCTCCACGGCCAAGTATGAACATCTACCATGTCGCCTCCTCGGTTGCTAATCCATTAGTCTTTCACCGTCTCGCCGCCCTCCTCCACCAACACTACGATTCTTCGCCTTGCCTCAACGACGACGGTACCCCAATCCGTGTCCCCTCCATGAAGCTCTTCAACTCCATCGATGACTTTTCCGACCACCTTTGGCAGGATGCTGCTCGACGTTGTGCCTTGACGCCCGACGGGAAGCTCTCTAAGAAGCTTGAAGCTATTTGCAGAAAAACTGTGGAGCAACTCAAGTACTTGGCTCATATTTACCAGCCTTATACCTTCTTCAATGGAAGGTATGTTTTTTTTTAAAAAAAAACCCTAAACCTATTTATAGTCATTTGATATATACTTTTGATTAATTTATAATATTTAAACATTAATTATGGAGTTTAACTAATTGTACTAATATTCATTTTTAATATTTAAAAAAAAACATCCCAAGAAGTCTTCTTAAAAAGAAAAATACTTCACTATATCCTAAAACACTAAGCTAGTTCTAAATTGTATTTTGATTCTTAAATTTTATGTTTATTTTATTTTGGTCTTTACATTTTCATATTAAACCGAGTTTAAAGAGGCTAGATGTTATATATATATGAACATCTTTGATTCATTTTATATAACTTTTCAAAATTTTTATATTTATGTGTTAAATTTTGTTAAAAAAATATTAATTAACTCTTAACGTATTTACCCTAGTATGACTTTTAAGATTTATTATTATTATTTTGAATTTACATGGGTAACTTTATAGTTGAAATTTTTATAGATATGTATTTTTCATAAAACTAATTAGAAATTTTTATAGATATGTATTTTTCATAAAACTAATTATAAATATTTATTTATTAATATATAGCATCATTAAATGTATATGTAATTGATTATATAATATTATTATATATGATATATAGTCACAAACCTACTTTCTTGATCAATTTAGATTTCGAGTACCTCCCATCATGAGAAACACTAATTAAATTATATATTGGTTACAAATAATTTATAAAATTAACTACTCTTATTCATTAACCAAAAAAAAAAAAAAAAAACTTTAAACTTAAACTTAAAGTAGTTAAATTCAACATAAGTAGTCTTACCGTATATTGAATTTGTAGGTTTTAAAGCATTATATTAGTGATTATTTTAAGAAAAATTACTATAAACATAAAAAATATCAAACTATTTACAAATATAGAAAAAATTTATTGTCTATCAGTAATAGATTACGATAGAATTCTATCGCTTTATATCGCTCAAGCAAATAAATTTTATCGCTTGAGCAATAGAATTCTATCGCGGTCTATCACTGATAAACTGTAAAAATTTTGTATGTTTGTAAATAGTTGGTTCATTTTTCTATATTTGAAAAGAGCCCATATTTTAAAGTATTTTTTTTTCCTTTTGACAATAATATTTTAAAGTAAATTTAAAAGCTTGATTGTGATTAAAAATGGTAAGATGAATTTATACAGGTTTGACAACAGCAATGCTCAAGAGCTAATGGAAATTATGAGTGAAGAGGAGAAGAGAGAGTTTGGGTTTGACGTGGAGAGCATTGATTGGACGGATTACATCACTAATGTCCACATTCCTGGATTAAGAAGGCATGTCATGAAGGGCAAAAAAGGAATTAAT

mRNA sequence

ATGTTAGGTTCCAGCAGACATGGTCGTGAATGCGACATTAGCGGCAATGGCAAGGCATGGAAGAGCTCCACGGCCAAGTATGAACATCTACCATGTCGCCTCCTCGGTTGCTAATCCATTAGTCTTTCACCGTCTCGCCGCCCTCCTCCACCAACACTACGATTCTTCGCCTTGCCTCAACGACGACGGTACCCCAATCCGTGTCCCCTCCATGAAGCTCTTCAACTCCATCGATGACTTTTCCGACCACCTTTGGCAGGATGCTGCTCGACGTTGTGCCTTGACGCCCGACGGGAAGCTCTCTAAGAAGCTTGAAGCTATTTGCAGAAAAACTGTGGAGCAACTCAAGTACTTGGCTCATATTTACCAGCCTTATACCTTCTTCAATGGAAGGTTTGACAACAGCAATGCTCAAGAGCTAATGGAAATTATGAGTGAAGAGGAGAAGAGAGAGTTTGGGTTTGACGTGGAGAGCATTGATTGGACGGATTACATCACTAATGTCCACATTCCTGGATTAAGAAGGCATGTCATGAAGGGCAAAAAAGGAATTAAT

Coding sequence (CDS)

ATGGTCGTGAATGCGACATTAGCGGCAATGGCAAGGCATGGAAGAGCTCCACGGCCAAGTATGAACATCTACCATGTCGCCTCCTCGGTTGCTAATCCATTAGTCTTTCACCGTCTCGCCGCCCTCCTCCACCAACACTACGATTCTTCGCCTTGCCTCAACGACGACGGTACCCCAATCCGTGTCCCCTCCATGAAGCTCTTCAACTCCATCGATGACTTTTCCGACCACCTTTGGCAGGATGCTGCTCGACGTTGTGCCTTGACGCCCGACGGGAAGCTCTCTAAGAAGCTTGAAGCTATTTGCAGAAAAACTGTGGAGCAACTCAAGTACTTGGCTCATATTTACCAGCCTTATACCTTCTTCAATGGAAGGTTTGACAACAGCAATGCTCAAGAGCTAATGGAAATTATGAGTGAAGAGGAGAAGAGAGAGTTTGGGTTTGACGTGGAGAGCATTGATTGGACGGATTACATCACTAATGTCCACATTCCTGGATTAAGAAGGCATGTCATGAAGGGCAAAAAAGGAATTAAT

Protein sequence

MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPIRVPSMKLFNSIDDFSDHLWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQPYTFFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN

Homology

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BLAST of Lsi01G019570 vs. ExPASy Swiss-Prot
Match: Q08891 (Fatty acyl-CoA reductase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAR2 PE=1 SV=2)

HSP 1 Score: 246.9 bits (629), Expect = 1.7e-64
Identity = 119/183 (65.03%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRA---PRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDG 60
           MVVNATLAA+A+HG A   P P +N+Y +ASS  NPLVF  LA LL+ HY +SPC++  G
Sbjct: 433 MVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELLYNHYKTSPCMDSKG 492

Query: 61  TPIRVPSMKLFNSIDDFSDHLWQDAARRCAL-----TPDGKLSKKLEAICRKTVEQLKYL 120
            PI V  MKLFNS+DDFSDHLW+DA  R  L     + D K+ +KL+ IC+K+VEQ K+L
Sbjct: 493 DPIMVRLMKLFNSVDDFSDHLWRDAQERSGLMSGMSSVDSKMMQKLKFICKKSVEQAKHL 552

Query: 121 AHIYQPYTFFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVM 176
           A IY+PYTF+ GRFDNSN Q LME MSE+EKREFGFDV SI+WTDYITNVHIPGLRRHV+
Sbjct: 553 ATIYEPYTFYGGRFDNSNTQRLMENMSEDEKREFGFDVGSINWTDYITNVHIPGLRRHVL 612

[Close]

BLAST of Lsi01G019570 vs. ExPASy Swiss-Prot
Match: B9TSP7 (Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAR6 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHV-ASSVANPLVFHRLAALLHQHYDSSPCLNDDGTP 60
           MV NA +AAMA+HG    P   +Y++ +SS  NP+   +L  L HQH    P    + T 
Sbjct: 376 MVANAAIAAMAKHG-CGVPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFPL---EETV 435

Query: 61  IRVPSMKLFNSIDDFSDHLWQDAAR--RCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQ 120
           I +  MK+ +S++ F+  L     +  R      G LS K     ++ +     LA  Y+
Sbjct: 436 IDLEHMKIHSSLEGFTSALSNTIIKQERVIDNEGGGLSTK----GKRKLNYFVSLAKTYE 495

Query: 121 PYTFFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKK 177
           PYTFF  RFDN+N   L++ MS EEK+ FGFD++ IDW  YI NVH+PGL++  +  KK
Sbjct: 496 PYTFFQARFDNTNTTSLIQEMSMEEKKTFGFDIKGIDWEHYIVNVHLPGLKKEFLSKKK 546

[Close]

BLAST of Lsi01G019570 vs. ExPASy Swiss-Prot
Match: Q9XGY7 (Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis OX=3999 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 58/179 (32.40%), Postives = 82/179 (45.81%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNAT+ AM  H          YHV SS ANP+    L  + H+++  +P +N D  P+
Sbjct: 314 MVVNATIVAMVAHANQRYVEPVTYHVGSSAANPMKLSALPEMAHRYFTKNPWINPDRNPV 373

Query: 61  RVPSMKLFNSIDDFSDHLWQD-----AARRCALTPDGKLSKKLEAICRKTVEQLKYLAHI 120
            V    +F+S   F  +L  +          A T   +  K      ++    L  L  I
Sbjct: 374 HVGRAMVFSSFSTFHLYLTLNFLLPLKVLEIANTIFCQWFKGKYMDLKRKTRLLLRLVDI 433

Query: 121 YQPYTFFNGRFDNSNAQELMEIMSEE--EKREFGFDVESIDWTDYITNVHIPGLRRHVM 173
           Y+PY FF G FD+ N ++L     E   E   F FD  +I+W DY    H PG+  HV+
Sbjct: 434 YKPYLFFQGIFDDMNTEKLRIAAKESIVEADMFYFDPRAINWEDYFLKTHFPGVVEHVL 492

[Close]

BLAST of Lsi01G019570 vs. ExPASy Swiss-Prot
Match: Q9LXN3 (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana OX=3702 GN=FAR4 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 59/182 (32.42%), Postives = 90/182 (49.45%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MV NA + A A H      S  +YHV SS  NP+ F ++  L   ++  +P +  DG+ I
Sbjct: 313 MVANAMVTAAAIHA-GKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVRRDGSSI 372

Query: 61  RVPSMKLFNSIDDFSDH------LWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAH 120
            V    + +++  FS +      L     R   +        K + I RK ++    L  
Sbjct: 373 LVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRK-IKLAMRLVD 432

Query: 121 IYQPYTFFNGRFDNSNAQELMEIMSEEEKREFG---FDVESIDWTDYITNVHIPGLRRHV 174
           +Y+PY  F G FD++N ++L     E  K  +G   FD +SIDW DY+T +HIPGL  +V
Sbjct: 433 LYRPYVLFKGIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHIPGLITYV 492

[Close]

BLAST of Lsi01G019570 vs. ExPASy Swiss-Prot
Match: Q93ZB9 (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana OX=3702 GN=FAR3 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-17
Identity = 56/182 (30.77%), Postives = 95/182 (52.20%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVN+ L +MA   +A +    IYHV SS+ NP+   +   L ++++   P  N +G  +
Sbjct: 317 MVVNSILVSMA--AQAGKQEEIIYHVGSSLRNPMKNSKFPELAYRYFSIKPWTNKEGKVV 376

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDG---------KLSKKLEAICRKTVEQLKY 120
           +V ++++ +S+  F  ++      R  +   G         KL +K      K +  +  
Sbjct: 377 KVGAIEILSSMRSFHRYM----TIRYLIALKGLELVNIILCKLFEKEFQYFNKKINFIFR 436

Query: 121 LAHIYQPYTFFNGRFDNSNAQELMEIMSEE--EKREFGFDVESIDWTDYITNVHIPGLRR 172
           L  +YQPY FF G FD+SN ++L +++S+   E   F FD + +DW DY  N H+ GL +
Sbjct: 437 LVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNTHVIGLLK 492

[Close]

BLAST of Lsi01G019570 vs. ExPASy TrEMBL
Match: A0A5D3BSK6 (Fatty acyl-CoA reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00010 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.0e-91
Identity = 164/179 (91.62%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLA LLHQHYDSSPCL+ DGTPI
Sbjct: 344 MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLADLLHQHYDSSPCLDVDGTPI 403

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQPYT 120
           RVPSMKLF+S+DDFS+HLWQDAARRCA TPDGKLSKKLEAIC+KTVEQLK+LA IYQPYT
Sbjct: 404 RVPSMKLFDSVDDFSNHLWQDAARRCASTPDGKLSKKLEAICKKTVEQLKHLADIYQPYT 463

Query: 121 FFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN 180
           FFNGRFDNSN Q LMEIMSEEEKREFGFDVESIDW DYITNVHIPGLRRHVMKGK+G N
Sbjct: 464 FFNGRFDNSNVQGLMEIMSEEEKREFGFDVESIDWKDYITNVHIPGLRRHVMKGKRGFN 522

[Close]

BLAST of Lsi01G019570 vs. ExPASy TrEMBL
Match: A0A5A7THR8 (Fatty acyl-CoA reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G001650 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.0e-91
Identity = 164/179 (91.62%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLA LLHQHYDSSPCL+ DGTPI
Sbjct: 214 MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLADLLHQHYDSSPCLDVDGTPI 273

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQPYT 120
           RVPSMKLF+S+DDFS+HLWQDAARRCA TPDGKLSKKLEAIC+KTVEQLK+LA IYQPYT
Sbjct: 274 RVPSMKLFDSVDDFSNHLWQDAARRCASTPDGKLSKKLEAICKKTVEQLKHLADIYQPYT 333

Query: 121 FFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN 180
           FFNGRFDNSN Q LMEIMSEEEKREFGFDVESIDW DYITNVHIPGLRRHVMKGK+G N
Sbjct: 334 FFNGRFDNSNVQGLMEIMSEEEKREFGFDVESIDWKDYITNVHIPGLRRHVMKGKRGFN 392

[Close]

BLAST of Lsi01G019570 vs. ExPASy TrEMBL
Match: A0A1S3B5T4 (Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103486124 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.0e-91
Identity = 164/179 (91.62%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLA LLHQHYDSSPCL+ DGTPI
Sbjct: 379 MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLADLLHQHYDSSPCLDVDGTPI 438

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQPYT 120
           RVPSMKLF+S+DDFS+HLWQDAARRCA TPDGKLSKKLEAIC+KTVEQLK+LA IYQPYT
Sbjct: 439 RVPSMKLFDSVDDFSNHLWQDAARRCASTPDGKLSKKLEAICKKTVEQLKHLADIYQPYT 498

Query: 121 FFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN 180
           FFNGRFDNSN Q LMEIMSEEEKREFGFDVESIDW DYITNVHIPGLRRHVMKGK+G N
Sbjct: 499 FFNGRFDNSNVQGLMEIMSEEEKREFGFDVESIDWKDYITNVHIPGLRRHVMKGKRGFN 557

[Close]

BLAST of Lsi01G019570 vs. ExPASy TrEMBL
Match: A0A0A0KYS8 (Fatty acyl-CoA reductase OS=Cucumis sativus OX=3659 GN=Csa_4G551130 PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 8.6e-91
Identity = 163/179 (91.06%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVF+RLA LLHQHY+SSPCL+ DGTPI
Sbjct: 381 MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFNRLADLLHQHYNSSPCLDVDGTPI 440

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQPYT 120
           RV SMKLF+S+DDFS+HLW+DAARRCA TPDGKLSKKLEAIC+KTVEQLKYLAHIYQPYT
Sbjct: 441 RVSSMKLFDSVDDFSEHLWRDAARRCASTPDGKLSKKLEAICKKTVEQLKYLAHIYQPYT 500

Query: 121 FFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN 180
           FFNGRFDNSN Q LMEIMSEEEKREFGFDVE+IDWTDYITNVHIPGLRRHVMKGK+GIN
Sbjct: 501 FFNGRFDNSNVQGLMEIMSEEEKREFGFDVENIDWTDYITNVHIPGLRRHVMKGKRGIN 559

[Close]

BLAST of Lsi01G019570 vs. ExPASy TrEMBL
Match: A0A6J1EKR7 (Fatty acyl-CoA reductase OS=Cucurbita moschata OX=3662 GN=LOC111435466 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.3e-86
Identity = 156/179 (87.15%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           +VVNATLAAMARHG APRPSMNIYHVASSVANPLVF+RLAALLHQHY SSPCL+ DGTPI
Sbjct: 394 VVVNATLAAMARHGGAPRPSMNIYHVASSVANPLVFNRLAALLHQHYSSSPCLDADGTPI 453

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQPYT 120
           RVPSMKLFNS+D+FSDHLW+DAARRC LT D K SKKLEA+CRKTVEQLKYLAHIY PY 
Sbjct: 454 RVPSMKLFNSVDEFSDHLWRDAARRCGLTADRKKSKKLEAMCRKTVEQLKYLAHIYHPYA 513

Query: 121 FFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN 180
           FFNGRFDNSNAQ LME MSEEEKREF FDV SIDWTDYI+NVHIPGLR HVMKGK+GIN
Sbjct: 514 FFNGRFDNSNAQGLMEFMSEEEKREFWFDVASIDWTDYISNVHIPGLRTHVMKGKRGIN 572

[Close]

BLAST of Lsi01G019570 vs. NCBI nr
Match: XP_038883521.1 (fatty acyl-CoA reductase 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 170/180 (94.44%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNATLAAMARHGRAPRPSMNIYHVASSV NPLVFH LA LLHQHYDSSPCL+ DGTPI
Sbjct: 387 MVVNATLAAMARHGRAPRPSMNIYHVASSVVNPLVFHHLATLLHQHYDSSPCLDVDGTPI 446

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCAL-TPDGKLSKKLEAICRKTVEQLKYLAHIYQPY 120
           RVPSMKLFNS+DDFSDHLW+DAARRCAL TPDGKLSKKLEAICRKTVEQLKYLAHIYQPY
Sbjct: 447 RVPSMKLFNSVDDFSDHLWRDAARRCALTTPDGKLSKKLEAICRKTVEQLKYLAHIYQPY 506

Query: 121 TFFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN 180
           TFFNGRFDNSNAQ LMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGK+GIN
Sbjct: 507 TFFNGRFDNSNAQGLMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKRGIN 566

[Close]

BLAST of Lsi01G019570 vs. NCBI nr
Match: XP_008442196.1 (PREDICTED: fatty acyl-CoA reductase 2 isoform X1 [Cucumis melo])

HSP 1 Score: 343.6 bits (880), Expect = 1.0e-90
Identity = 164/179 (91.62%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLA LLHQHYDSSPCL+ DGTPI
Sbjct: 379 MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLADLLHQHYDSSPCLDVDGTPI 438

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQPYT 120
           RVPSMKLF+S+DDFS+HLWQDAARRCA TPDGKLSKKLEAIC+KTVEQLK+LA IYQPYT
Sbjct: 439 RVPSMKLFDSVDDFSNHLWQDAARRCASTPDGKLSKKLEAICKKTVEQLKHLADIYQPYT 498

Query: 121 FFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN 180
           FFNGRFDNSN Q LMEIMSEEEKREFGFDVESIDW DYITNVHIPGLRRHVMKGK+G N
Sbjct: 499 FFNGRFDNSNVQGLMEIMSEEEKREFGFDVESIDWKDYITNVHIPGLRRHVMKGKRGFN 557

[Close]

BLAST of Lsi01G019570 vs. NCBI nr
Match: KAA0041211.1 (fatty acyl-CoA reductase 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 343.6 bits (880), Expect = 1.0e-90
Identity = 164/179 (91.62%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLA LLHQHYDSSPCL+ DGTPI
Sbjct: 214 MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLADLLHQHYDSSPCLDVDGTPI 273

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQPYT 120
           RVPSMKLF+S+DDFS+HLWQDAARRCA TPDGKLSKKLEAIC+KTVEQLK+LA IYQPYT
Sbjct: 274 RVPSMKLFDSVDDFSNHLWQDAARRCASTPDGKLSKKLEAICKKTVEQLKHLADIYQPYT 333

Query: 121 FFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN 180
           FFNGRFDNSN Q LMEIMSEEEKREFGFDVESIDW DYITNVHIPGLRRHVMKGK+G N
Sbjct: 334 FFNGRFDNSNVQGLMEIMSEEEKREFGFDVESIDWKDYITNVHIPGLRRHVMKGKRGFN 392

[Close]

BLAST of Lsi01G019570 vs. NCBI nr
Match: TYK02407.1 (fatty acyl-CoA reductase 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 343.6 bits (880), Expect = 1.0e-90
Identity = 164/179 (91.62%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLA LLHQHYDSSPCL+ DGTPI
Sbjct: 344 MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLADLLHQHYDSSPCLDVDGTPI 403

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQPYT 120
           RVPSMKLF+S+DDFS+HLWQDAARRCA TPDGKLSKKLEAIC+KTVEQLK+LA IYQPYT
Sbjct: 404 RVPSMKLFDSVDDFSNHLWQDAARRCASTPDGKLSKKLEAICKKTVEQLKHLADIYQPYT 463

Query: 121 FFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN 180
           FFNGRFDNSN Q LMEIMSEEEKREFGFDVESIDW DYITNVHIPGLRRHVMKGK+G N
Sbjct: 464 FFNGRFDNSNVQGLMEIMSEEEKREFGFDVESIDWKDYITNVHIPGLRRHVMKGKRGFN 522

[Close]

BLAST of Lsi01G019570 vs. NCBI nr
Match: KGN55220.2 (hypothetical protein Csa_012242 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 1.8e-90
Identity = 163/179 (91.06%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVF+RLA LLHQHY+SSPCL+ DGTPI
Sbjct: 370 MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFNRLADLLHQHYNSSPCLDVDGTPI 429

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQPYT 120
           RV SMKLF+S+DDFS+HLW+DAARRCA TPDGKLSKKLEAIC+KTVEQLKYLAHIYQPYT
Sbjct: 430 RVSSMKLFDSVDDFSEHLWRDAARRCASTPDGKLSKKLEAICKKTVEQLKYLAHIYQPYT 489

Query: 121 FFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKKGIN 180
           FFNGRFDNSN Q LMEIMSEEEKREFGFDVE+IDWTDYITNVHIPGLRRHVMKGK+GIN
Sbjct: 490 FFNGRFDNSNVQGLMEIMSEEEKREFGFDVENIDWTDYITNVHIPGLRRHVMKGKRGIN 548

[Close]

BLAST of Lsi01G019570 vs. TAIR 10
Match: AT3G11980.1 (Jojoba acyl CoA reductase-related male sterility protein )

HSP 1 Score: 246.9 bits (629), Expect = 1.2e-65
Identity = 119/183 (65.03%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRA---PRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDG 60
           MVVNATLAA+A+HG A   P P +N+Y +ASS  NPLVF  LA LL+ HY +SPC++  G
Sbjct: 433 MVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELLYNHYKTSPCMDSKG 492

Query: 61  TPIRVPSMKLFNSIDDFSDHLWQDAARRCAL-----TPDGKLSKKLEAICRKTVEQLKYL 120
            PI V  MKLFNS+DDFSDHLW+DA  R  L     + D K+ +KL+ IC+K+VEQ K+L
Sbjct: 493 DPIMVRLMKLFNSVDDFSDHLWRDAQERSGLMSGMSSVDSKMMQKLKFICKKSVEQAKHL 552

Query: 121 AHIYQPYTFFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVM 176
           A IY+PYTF+ GRFDNSN Q LME MSE+EKREFGFDV SI+WTDYITNVHIPGLRRHV+
Sbjct: 553 ATIYEPYTFYGGRFDNSNTQRLMENMSEDEKREFGFDVGSINWTDYITNVHIPGLRRHVL 612

[Close]

BLAST of Lsi01G019570 vs. TAIR 10
Match: AT3G56700.1 (fatty acid reductase 6 )

HSP 1 Score: 117.9 bits (294), Expect = 8.6e-27
Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHV-ASSVANPLVFHRLAALLHQHYDSSPCLNDDGTP 60
           MV NA +AAMA+HG    P   +Y++ +SS  NP+   +L  L HQH    P    + T 
Sbjct: 355 MVANAAIAAMAKHG-CGVPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFPL---EETV 414

Query: 61  IRVPSMKLFNSIDDFSDHLWQDAAR--RCALTPDGKLSKKLEAICRKTVEQLKYLAHIYQ 120
           I +  MK+ +S++ F+  L     +  R      G LS K     ++ +     LA  Y+
Sbjct: 415 IDLEHMKIHSSLEGFTSALSNTIIKQERVIDNEGGGLSTK----GKRKLNYFVSLAKTYE 474

Query: 121 PYTFFNGRFDNSNAQELMEIMSEEEKREFGFDVESIDWTDYITNVHIPGLRRHVMKGKK 177
           PYTFF  RFDN+N   L++ MS EEK+ FGFD++ IDW  YI NVH+PGL++  +  KK
Sbjct: 475 PYTFFQARFDNTNTTSLIQEMSMEEKKTFGFDIKGIDWEHYIVNVHLPGLKKEFLSKKK 525

[Close]

BLAST of Lsi01G019570 vs. TAIR 10
Match: AT3G44540.1 (fatty acid reductase 4 )

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 59/182 (32.42%), Postives = 90/182 (49.45%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MV NA + A A H      S  +YHV SS  NP+ F ++  L   ++  +P +  DG+ I
Sbjct: 313 MVANAMVTAAAIHA-GKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVRRDGSSI 372

Query: 61  RVPSMKLFNSIDDFSDH------LWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAH 120
            V    + +++  FS +      L     R   +        K + I RK ++    L  
Sbjct: 373 LVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRK-IKLAMRLVD 432

Query: 121 IYQPYTFFNGRFDNSNAQELMEIMSEEEKREFG---FDVESIDWTDYITNVHIPGLRRHV 174
           +Y+PY  F G FD++N ++L     E  K  +G   FD +SIDW DY+T +HIPGL  +V
Sbjct: 433 LYRPYVLFKGIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHIPGLITYV 492

[Close]

BLAST of Lsi01G019570 vs. TAIR 10
Match: AT4G33790.1 (Jojoba acyl CoA reductase-related male sterility protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18
Identity = 56/182 (30.77%), Postives = 95/182 (52.20%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVN+ L +MA   +A +    IYHV SS+ NP+   +   L ++++   P  N +G  +
Sbjct: 317 MVVNSILVSMA--AQAGKQEEIIYHVGSSLRNPMKNSKFPELAYRYFSIKPWTNKEGKVV 376

Query: 61  RVPSMKLFNSIDDFSDHLWQDAARRCALTPDG---------KLSKKLEAICRKTVEQLKY 120
           +V ++++ +S+  F  ++      R  +   G         KL +K      K +  +  
Sbjct: 377 KVGAIEILSSMRSFHRYM----TIRYLIALKGLELVNIILCKLFEKEFQYFNKKINFIFR 436

Query: 121 LAHIYQPYTFFNGRFDNSNAQELMEIMSEE--EKREFGFDVESIDWTDYITNVHIPGLRR 172
           L  +YQPY FF G FD+SN ++L +++S+   E   F FD + +DW DY  N H+ GL +
Sbjct: 437 LVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNTHVIGLLK 492

[Close]

BLAST of Lsi01G019570 vs. TAIR 10
Match: AT5G22500.1 (fatty acid reductase 1 )

HSP 1 Score: 89.7 bits (221), Expect = 2.5e-18
Identity = 61/182 (33.52%), Postives = 85/182 (46.70%), Query Frame = 0


Query: 1   MVVNATLAAMARHGRAPRPSMNIYHVASSVANPLVFHRLAALLHQHYDSSPCLNDDGTPI 60
           MVVNA +AA   H         IYHV SS  NP+ F +L     +++   P +  +G+PI
Sbjct: 311 MVVNAMVAAATAHS-GDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRPLIGRNGSPI 370

Query: 61  RVPSMKLFNSIDDFSDH------LWQDAARRCALTPDGKLSKKLEAICRKTVEQLKYLAH 120
            V    + +++  FS +      L     R   +            + RK ++    L  
Sbjct: 371 IVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLSRK-IKLAMRLVE 430

Query: 121 IYQPYTFFNGRFDNSNAQELMEIMSEEEKR---EFGFDVESIDWTDYITNVHIPGLRRHV 174
           +YQPY  F G FD+ N + L     E  K     F FD +SIDW +YITN HIPGL  HV
Sbjct: 431 LYQPYLLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITNTHIPGLITHV 490

The following BLAST results are available for this feature:

BLAST of Lsi01G019570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q08891	1.7e-64	65.03	Fatty acyl-CoA reductase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAR...	[more]
B9TSP7	1.2e-25	39.11	Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAR...	[more]
Q9XGY7	1.1e-18	32.40	Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis OX=3999 PE=1 SV...	[more]
Q9LXN3	1.6e-17	32.42	Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana OX=3702 GN=FAR4 PE=1...	[more]
Q93ZB9	2.1e-17	30.77	Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana OX=3702 GN=FAR3 PE=1 SV=1	[more]

BLAST of Lsi01G019570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSK6	5.0e-91	91.62	Fatty acyl-CoA reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7THR8	5.0e-91	91.62	Fatty acyl-CoA reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3B5T4	5.0e-91	91.62	Fatty acyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103486124 PE=3 SV=1	[more]
A0A0A0KYS8	8.6e-91	91.06	Fatty acyl-CoA reductase OS=Cucumis sativus OX=3659 GN=Csa_4G551130 PE=3 SV=1	[more]
A0A6J1EKR7	8.3e-86	87.15	Fatty acyl-CoA reductase OS=Cucurbita moschata OX=3662 GN=LOC111435466 PE=3 SV=1	[more]

BLAST of Lsi01G019570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883521.1	1.7e-93	94.44	fatty acyl-CoA reductase 2, chloroplastic-like [Benincasa hispida]	[more]
XP_008442196.1	1.0e-90	91.62	PREDICTED: fatty acyl-CoA reductase 2 isoform X1 [Cucumis melo]	[more]
KAA0041211.1	1.0e-90	91.62	fatty acyl-CoA reductase 2 isoform X1 [Cucumis melo var. makuwa]	[more]
TYK02407.1	1.0e-90	91.62	fatty acyl-CoA reductase 2 isoform X1 [Cucumis melo var. makuwa]	[more]
KGN55220.2	1.8e-90	91.06	hypothetical protein Csa_012242 [Cucumis sativus]	[more]

BLAST of Lsi01G019570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11980.1	1.2e-65	65.03	Jojoba acyl CoA reductase-related male sterility protein	[more]
AT3G56700.1	8.6e-27	39.11	fatty acid reductase 6	[more]
AT3G44540.1	1.1e-18	32.42	fatty acid reductase 4	[more]
AT4G33790.1	1.5e-18	30.77	Jojoba acyl CoA reductase-related male sterility protein	[more]
AT5G22500.1	2.5e-18	33.52	fatty acid reductase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033640	Fatty acyl-CoA reductase, C-terminal	PFAM	PF03015	Sterile	coord: 102..173 e-value: 4.0E-18 score: 65.4
IPR033640	Fatty acyl-CoA reductase, C-terminal	CDD	cd09071	FAR_C	coord: 103..172 e-value: 3.26059E-25 score: 91.4631
None	No IPR available	PANTHER	PTHR11011:SF68	FATTY ACYL-COA REDUCTASE	coord: 1..174
IPR026055	Fatty acyl-CoA reductase	PANTHER	PTHR11011	MALE STERILITY PROTEIN 2-RELATED	coord: 1..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G019570.1	Lsi01G019570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1903175	fatty alcohol biosynthetic process
biological_process	GO:0035336	long-chain fatty-acyl-CoA metabolic process
biological_process	GO:0010584	pollen exine formation
biological_process	GO:0009635	response to herbicide
biological_process	GO:0010345	suberin biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0102965	alcohol-forming fatty acyl-CoA reductase activity
molecular_function	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity