Lsi01G019310 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G019310
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
Location	chr01: 24367847 .. 24383001 (+)
RNA-Seq Expression	Lsi01G019310
Synteny	Lsi01G019310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGGGTAAACAATCAACATTTATCAAAGAACCAATAAACTCAACTAGTACACACGGGAATAGAAAAAAGAACCAACAAATACTAGAACATACCATGCATAGTTGCTCGGTTAGGAAGCTGACCATACATGACTGACATACTCAGGTCATTAAAAACTTCAAGAGGAAGCATCCTAATAACAAGTAGTGGACAAAGACGCTCAAACAGAGATTGTTGCACACTCAGAGAGATATCTTCGTTTTGGCTCTCATGTTTAATGTAGAAGCACTCATCTATCCTGCCGAACAAAATATAGTAAATTTACTCAATACTTCATAACTATACTCCACGGGTTGATTTTATTTCATACTATGTATTGGTGTAAAAATACATATCCATTCAGAGATTATAGGCAATCTTCTTTGATTTCTAATTGGAAATCTTTTCTGCAATTCACCTTAAGGTGTTGGGAGCATATAAACTAAATTTCTCTCTTCTTTAGTAAGAAACAAGATAATTGTATTTGAATCAAAAGAAATAAGGAAATATATGTTTGTCATTGTGATGAGGTTGTATGGAAAGGAATGGACGAGAGATCCTACTTAGAAAATAAATACAAAGTGAAAAAACAAATTGAATTAAAAAAAATCAAAGTCCTTTAACAGAAAAGATAACCTTATCTGTTAGTTTTTAAGCTTGGAAATTGAATTAAGGCACCACAAATCAAGCCAAGCACCACCAAACAATTGTATATTATCTTAGAATTGCATATGGTAGTTTTTCATTGACGGCAGGAAAAGGAATCGACTAAAGACATCACTCTAAAGTTTGCTCTCCATGTTCCTAAATTAACTTGCAATCTCTTAACTTTTGAATCATTCTAATTGTCGTGTTGTTTTCTTTGAATTCCATTGCATTTGCCAAGACCATACCTCAGGGAAAAAGTTCGTACATGCTAGGATGCTTGACGAAGGTCGCAACTTCAGCATTTTAGGCTAGGACATCCAAGTTTTTTCTATGCCAAATATCTATTTTCCAATCTTTCTAAAGGAGTTGATTTTTCTTATGTTCATTGTGAAAATTGCATCTTTGCAAAAAGTCATCACTCCTCTTTTTCACCAAAACCATACTCGTCTTCAAAACTATTTTATAATTCACAACGATACTAGTGGTCCCTTGTAAGAAAACATTAGTTTGTGACTTTCATTGATGATCACACACACTCACTTGTTGTGGGTTTATTTATTAACAAAGAAGTCAAAAATGAATTATGTATTAAAATGTTTTTACAATATGATTGAAACTAAAATTTCAACAAAAATAGGTTTCTTACACTCTGAATTGAATATTTCAATGAACATTTAAGTGAGTTTTTTAAGAATAAAGACATTGTTCATCAATCTACTTGTTGGCACTCTCTTAACGAAATAGTATTGCATAACATAAAAATAGGCATTTACAAGATGTTGCTCGAGCCACAATGTTTTTTTGTTAAATTCCAAAGTACTTGGGCGTAGTCCTCACGACTGTCTACCTACAATAAAAAAGGCCTTCTAAAGTTCCAGATTTTAAAACTCCACTAGCTCTTTCGAAAGTTTTTTTTTTCCAACTACTCGTTTGTACTATGATTTACTTATCAACAATTTTGGGTGTATTTGCTGTAAAATATTATTTTTTCTCTTATTATTCACTAGGCAAAGAGGGATTTCTTAAATAGAAGAAATACCCAATTACAAATAAGGAAAAAATAAATATGGCAAATATACTAAAATAAATACAGTGAAAATATTGACAAAATAGGAAATAATCAACACTCCCCCTCAAGCTGGTTGGAAGATATCATTCATGGCCAGCTTGTCAATCAAGTTGTTGAATTGCCACTTTGGAAGGCCTTTAGTTAACACATCTGCAATTTGTTCTGTTGTTGGGAGATAGTGTATGCATATTATTCCAGCATTAATCTTCTCCTTTATGAAATGTTTATCAACTTCAAAATGTTTTGTCCTATCATGAAGGTCATGATTGTGGGCAATAGAAATTGCTCCCTTATTATTACAATAAATTCGCATGGGAATAGTCTGATAGAATTTCAACTCTTCTAGTAGTCTTCTTATCCATATGCCTTCACAAATACCATGGGCTAAAGCCCTGAATCAGCTTCAGCACTACTTCTCGCGACCACACTTTGTTTTTTACTTCGTCAAGTAATAAGATTTCCTCCAACAAAGGAGCAATAACCCGAAGTGGATCTTCTATCAGTAGTACCACCTGCCCAATCTGCATCAGTGTAAACTTCGATAGTTAGATGATCATGTTTTCTAAACAATATGCCTTTTCCAGGAGTACCTTTCAAATATTTCAAGATCCTATAAATGGCATCAAAATGTGCCGGTCCAGGAGCTTGCATGAATTGACTCACCATACTGACGGCAAACGCAATGTCAGGACGTGTGTGAGAGAGATATATGAGTCTCCCCACAAGTCTTTGATACTTTTCTCTGTCTTTTATTTCTTTTTCAGTTGCAGCTTCTAATTTCAAGTTCTGCTCAATGGGTGTGTCAACTACCTTGCAACCAAGTAAACCTATTTCTTTCAGGAGGTCAAGAACATACTTCCTTTGATTGACAATAATGCCACTCTTGGACCTGGCAAACTCCATGCCTAGGAAATACTTTAAGGTTCCTAGGTCTTTGATTTGGAAATCATTAGTTAGTTGTTCCTTCACACAAGTCAGTCCAATTTCATCATTACCTGTAAGAACAATATCATCAACATACACTATCAAGACGATAACTTTGTCATTTTTTGTATGTTTGTAGAACATAGTATGATCAGCTTGACTTTGACTGAATCCATAGCTAGTGACTGCCTTTTCAAAACGTTCAAACCAGGCTCTAGGAGATTGTTTGAGGCCGTATAATGATTTCTATAACTTGCACACTTTGTTAACCCCGAGATCCATCTCGAAGCCAGGTGGTAGGTCCATAAATACCTCTTCTTCAAGATCCCCATTAAGAAAAGCATTTTTAACATCAAGCTGATAAAATTAACTACAACAGACAACAAAATTCCGATAGAGTTAATTTTAGCAACCGGCGCAAATGTTTCCTGATAGTCAACTCCATAAGTCTGAGTGAACCCCTTAGCAACCGTCTAGCCTTGTATCTTTCGATACTACCATCTGTGTTACATTTTACAGTGAACACCCACTTGCATCCCACTGTTTTTTGTCGTTTGGTAAATCAACTATGTCCAATCTGCAATTTTGTTTCAGCACATTCATTTCTTCCATCACTACTAAATTCCAATTCAAATCATTTAGGGCCTACTGAATATTCTTTGGAACTAACAGGTCGGTTATTTTGGATGTGAAGGCTTTATGACTGTCAGACAATCTATGATAAGAAAGATAATTTGCAATGGGATATTTGACACATTTACGAGTACCTTTCCTAAAGGCAATTGGAAGATCAAGATTAGGAATATCAGGTAGAGAATTATGAGAAGAAGAAGAGTGTATGTTACCTGGATCTTCAGGATCATTCATCAGAGTATTAGATTGGTCTTGTGATAGATCAACTGTATGTTCTCGATCCCTTTGAGTCAAGTTTCTTCTAGTATAAACCTGAAGTTCAGGTGTTAGTGTTTCTCCCCCTGAAGAGGAGCTTTCTACACTTGGTATCACAGGACTAGTGCTCATAATTTCAGGGTCAATGATGTGTGGGGTAGGTGAGGTTTCCCAAAAGTGATCTTCAAGGTTAGATTTCTCCCCCTGAAGAGAATGTGGGCTAAAATAAGGATGATTTTCTAGGAATACAACGTCCATACTCTAAACATACTTGTTGGTCGAAGGGTCAAAACATTTATAAGCCTTCTTATTGGGAGCATAACCTACAAAGATGCATTTAATGGCCCGAGAATCAAGTTTAGTTCGAGCAAGAGAAGTATGAACATTCGATTGATCAAGTAGGTAGCAGTAAGGATTGCATCACCCACAAATATTTTGGAACATTCATAGAAAACATAAGCGCACGGGCAACTTCAAGGAGATGTCTATTTTTTCATTCAGCGATGCCATTTTGCTGAGGAGTATCACGACATGTAGCTTGATGAACAATGCCCTTATCTTGCAGAAACGTTTTTAAGTGTTCATTGAAATATTCAGTACCATTATCAGAGTGAAGAATGCGGATTTTAGATCGAAATTGAGTTTCCATCATATTGTAAAAACGAACAAAAACGTCTTTTACCTCTGATTTTTTGTTTACTAAATAAAACCAGGTTAGACGAGTGTGATCATCGATAAAGGTAACAAACCAACGCTTACCACTATGTGTTAAGACTTTAGACGGACCCCACACATCAGTATGAATTAAAGAGAAAGTTGAGGAAGCCTTGTAAGGTTTACGTAAATAAGTGGATCGATGATGTTTGGCAAAAATGCAACTTTCACAATGAAAAACAGAACAATCAATTCGTTTAAATAAATCTGGAAATAAATATGTTACATAAAAGAAACTTGGATGTCCTAATCTACGATGCCAAAGCATGATAGTTTCTGGAATAGAAGAAGAACTGACACTACTGAAGCCCTGAGCTATTTTATTACTAGAAGAAACTTCATCATCAAAGTAATAGAGACCATCAATCATTCTAGCACTGTCAATCGTCTCCCCCGATTTCTAATCCTAAAAGGTACAATGAGTTCCACAAAAAATAACACGACAGTTAGTATCCTTAGAGATTTGACTGACAGATAACAGATTACATGCTAACTTTGGAACATGAAGGACAGAACGTAAAGTAAATTTTTGAGTCAAAGGAATATGCCATTTGCCTGCAATAGGGGCAAAACTACCATCTGCAATACGAATTTTGGCATTACAATATACTGGAGAGTATGAGTCAAATAGAGAGGAGGAACTAGTCATATGATCAGTGGCTCCAGAATCTATAATCCATGGAGAAGAATTTGTGCAAGAAAAAGCTTCAGGACAATTACCTGATTGAGCCAAGGAAACACTAGGATTACCAGATGAACTAGTCTTTAGCAGTTTCAGGATTTGGTCAATCTGCTCTTTGCTAAACAGATTGGATTCAGTCACATTTGCGCTGTAGATATGTTGATGGGAGTGTCTGTCACTTTGTTTAGAACTCTTCCAATTCGCAGGTTTTCCATGAAGTTTCCAACAGGTTTCACGTGTATGTCGAGGTTTATTGCAATGATCACACCAGACCCGAGGCTTTTCATGTGTCCTGTTGGAATTATCAGAGGCTTTCATGGCAGTATGTTCAGTTACCAACGCAGAGCTCTCGACTAACTCAATAGGTTTTTTTCCAATCATTACGTTCCTGCGACTTTCTTCCCTGCGAACTTCAGAAAAAACATCATTAATAGTTGGAAGGGGAGTTTTCCCAAGTATTCTACCTCTAACCCCATCAAACTCAACATTGAGGCCGACAAGAAATTTGTAAATACGACCATCTTCGACAGTTTTTCTATAGTGTTTTTGGTCCTCTATAGACTTCCACTCGTACGTATCAAAGAGATCAAGGTCTTGCCAAATCCTTTTCAGGGAGTGAAAATATTGTGTGACTGAGTTACCTCCTTGTCGTATATCATCCAATTTCAAATTCAACTCAAACACTTGTGAATGGTTGCCCAAATCAGAATACATCTGAGTCACACTATCCCATAATTCCTTGGCAGTAGAGTAACACATGTAGTTACAGCTGATGTCGTCAACCATGGAATTTATGAGCCAAGTCATAACCATGGAGTTTTCAGCATCCCACCTAGCAAATGAAGGGTCATCTGGGCTGGGGGCAGTTTTTTCTCCAGTTATGTAACCAATCTTCCTTGTCCACGAATATACATCCGAACACTTTGGGACCAACGAAGAAAATTATCCCCATTAAGTCGAATGGTAGTTATTTGGACAGTGGGACTATTGGAATGAAAACGATTGTTGAAGACTTTAGCGGCAGGTGCCTTAGTGTCCGACATATTGCAACAAACCGAGGCAAAAAACCAGCAAACTGTGGATCTAAAAAAACCCAGCAAAAACCGCGTATCAACCAGTAGATCTGAAAAAAAAGAACCACCAAACCGTGAAGAAGCGGTAGAGGCGAACGGCGGACGGCGGCAATGGGCGGCCGGCGAAGCAGACAAGGTCGGCCGACCAGGACAGACAATTCCGGCGAGCAGTCGATGAAGGTCATACAACGTGCGGTCGAGTGTGTTGCGTTGGAATGTGAAGTGCGAACATGTGCGGCGGAGATGCGATCGAGCGTGAAGTCTGACGGAGATGCGATCGAGCATGAAGTCCGGCGGAGATGCAAGCGACCGGCTGCGACAGAGGGCGAACGGCGCTGATGGGTCGGCGGCGGCGGCAGTGAATCTAGGGTTTTTTAGTTTTCAGAAAAATTAGGGTTTTAGGGTTTCAAAATTTGTTGCTCTGATACCATGCTGTAAAATATTATTTTTTCTCTTATTATTCACTAGGCAAAGAGGGATTTCTTAAATAGAAGAAATACCCAATTACAAATAAGGAAAAAATAAATATGGCAAATATACTAAAATAAATACAGTGAAAAATATTAACAAAATAGGAAATAATCAACAGTATTAGTTATGTGCATCTATCTAGTTCTTTTCTATCAAAATTTGATCATTAGAATATGAAATGTATTTTCTAGACTATGCTTCTAACCAAAAGGGATATAAATGTTTTGATCCTCAAACTAACAGATGTTATGTAAGTATGGATATGTCGTTTTTGAAAAACCAACCTTCTTTTACCCAAATTTATCTTTAGGGGATAAACCATAAAACAAATTTAGAGGATGATAATTTTTGGGATGTATTTGTCGTACTTCCAAATATTATTTGTCCTAATATTGCTAGTTCTCCAATGCCAAATACAGAAATTTCTAATTCAGATGGAGAGTTACCAAAAAAGGATCTTACTAATCTGCATCATGAGTTTAATTTTGTAGTAGAAGAAGGCTCAATCAAACGAGTAAGGACCAAATAGTTGACTCCTCACAAGTCCAATCTAAAACTCCGAGGGGATGATCTATTGAAAATGTCTTGCCTGGTGTCCCTCCAACCATTGAAAATGTCTTAAATCTTACCTCTAATCTTGATATCCCTATTGCTTTGAGAAAATGTACTAAAACATGTACTACATCTCATTTGCAAATTATATATGGTACAAAAATTTATCTGATCATTTTCCCAATCTAAGAACACTAAAATACTTCTTAGGAATGGAATTTGCAAGATCTAAAAAAGGTATCTACATGCTTCAAAGAAAATATATTATTGATTTACTTCAAGAAATAAGCTTACTTAGATGTAAGGTAGCTAAGACACCTACTGAACCAAATTTGAAATTAGAAAAGATGAAGTAAATGATAAGGACCGATACCAAAGACTTGTGAAAAAACTTATTTATTTGTGTTTTTTTAAATATGAAATAAGAGGGGAAAACCCCCAATCCGAAGGAAAATTACAGAAACAAAACATTCCAATGGGCCGTGAGAGAAAATTCTGTAATTTCAAAATGGACTTGCAGAATGAAATTTCTTCTCGGAGATTTTTAAGAATAAAGGTTTCAATAAGACAGAAATTACATGGACATTTAACTGTATCTTGATAACAAATTTTCTATTTTCGTTAATGGAAGACTAAAGCGTGTGAAGTAAGGCTTGTAATGGGATACGTACTCTTTCTGTCCTTTCACATATGACAAAATACGCTTTAGGACCACATCAGTGGCTTTCACCAAGTGCTCGTTTATCATACTCAGGAACCTTACGAGAATTGCATTAGATGGTTCTGCAAACAGCTTATCAATCAACGGCCCTATCAAGAATTTCCAATCTTGAACCTGAGAAATTACAAAACAATCAACCAACCCCTTATTCCCTTTCTGACAGTTGATGCAGACTTATTAAGAACAAATAAGAAAAACCAACTTGAACATATTGCATAGTTTTCATACAAACAAGGAAAAAATTGCAAAACAAGAACGAAAAAAGAGAAGCATCATGAACTATTATCTCCTCATTGCTAATACACGTCACACCAACTTGGGGGGAAAGGTAAGACCTGGGGGTTTCTTTTTTGGATTTTGTCATTTCTCGTTCATATTAATGTTGCTAATGAGCCATTGTCCAAAAGAAAATGTCACTCTATCAGATTCTTTCCTTACCAAATTAGTTTTACAAACGTCATTATCAAGGGAGCTATTTCTGAGGGTGAACAGCCGTAGTGCTTGATTTGACTTTCTACTCTCCTGTTTTGTCCAGTTTCCACTTGAAACATCACTGGAATTATTCAATCTCATGGAATCTAAGACCGTGAACAAATTGTCTTTGGTCCACTCCAAGTTTCCAACTCCCAATCAAACAAATTCCTTAAAAAACAATGGATTTTCATTTTCATCTTTCAATTCCGATCCTATGAAGAATGAATTTTATCCTTTAGTAAAAACAGCATTAGAAGCCAAAACAGTAAATTCTTGTCGGCTACAATTCTAAGAAACAGCTTTCTTGAGAGATGGAGCCAAAAGATTAGAAACATTTTCTTCAATACAATCTGGATAAAGTATAATCCACATTGATTGAAGGAATTGAAGAATGATGCACCTTTCTTCAGTGTAGTACTGGCTATTGGGGATAAGGTGCAATAAAACGATTCTTCACCTCTCGAATGCTTAAAGACTTAGAAGACTCAAATGCCCTAAGAGAATCACCAAAGGACGTCTTATTAGTGATTGAATCATCTCTGAATTTCCCACAGAAGCAAGTAAAAAGTTTAGTGATTGATCTAATAAAATAATCAAGCCGTGGTGAACAACTATGCTGAAGAAACTTTTCATCCTCAAATACTGAGCTAATTCAAATGATGTCCAATGAATTCCTTAAGTTTTTTAGATCCAAAGTGCCATTAAAAGACATTAGACAGAAGGAATCTTGTTGATTATTTCCTATTTTATCAATATTTTCACTGTATTTATTTTAGTATATTTGCCATATTTATTTTTTCCTTATTTGTAATTGGGTATTTCTTCTATTTAAGAAAACCCTCTTTGCCTAGTGAGTAATAAGAGAAAATTATACATTTTTGAACATGTTATCAGAGCAGTAATAAGAAAAGAAAAAAAAAAACCCTAAAATTTTTTTTCTAACCCTAACCCTAGTCTCTGCCGCCGCCACCGCTACCCTCAACCACCGCCACCATCCTTCAGCTCGTGTGCGCTGTCCTTCAGCTCGATCGACTAGGTCTTCGATGAAGCAAGCGAGCTCGTGCGCATCTAAAGCCGTCTGCCAGATCCGACATCTGAAGCTCATCCAAAACCGTCCGTCGGCCAGATCCGACATCTGGAGCTCGTGCGCATCCGAAGCCGTCGTCTGAGCCCTTCACCGGCCTTGTGGGTTTTGTTTCGCACCTCACCGGACGCCGCCCAGCCCTTCATCCGACGTTTCGCGCCTTGTCGACTGTCGTTCAGGTCTCGCCGGTTGTTTCGCCCCTCGCCGGCCGGTCTTCAGCAGTCGCCGGTCAATATTGTCTCTCTGTTTTTCGTGGGTGCTTGTCTCTCTTTTTTTTTTTGTGGATATTCCTTTTTTTTAGCAATCATGGCTGAAGAAAAATTACCTATTGCTAAAGTTTCAAAAAATCGAATCCACTCCAACACTCCTACTGTCCAAATTACTTCCATTCGACTTAAAGGGGATAACTTCCTTCGTTGGTCCCAAAGTGTTCGAATGTACATTCGTGGGCAAGGGAAGATTGGCTATATTACAGGAGAACAAAACACCCCTAAACCAGATGACCCTTCCTTTGCAGCGTGGGATGCTGAAAATTCTATGGTCATGACTTGGCTCGTCAATTCCATGGCTGAGGATATCAGCTGCAATTATATGTGCTACTCAACGGCAAAGGAATTATGGGATAGTGTGACACAGATGTATTCTGATTTGGGAAACCAGTCACAAGTATTTGAATTGAATCTCAAATTAGGAGATATGCGTCAGGGAAGTCACTCGGTCACACAATATTTTCACTCCCTTAAAAAAATTTGGCAAGACCTATATCTCTTTGATACATATGAGTGGGAGTCTACAGATGACCAAAAACATTACAGAAAAACTGTGGAAGATGGTCGTATCAAAAAATTTCAAATTTCTTGCAGGCCTCAATGTTGAATTTGATAAGGTTCGAGGTAGAATTCTTGGAAAAACTACTCTTCCTACCATTAATGATGTTTTTTCTGAAGTTCGCAGGAAAAAAAGTCGCATAAACGTAATGATTGGAAAAAAACCCATTGAGCCAGTCGAGAGCTATGCGTTGGTAACTGAACATACTGTCATGAAAGCCTTTGATAATTCCAACAGGACACATGAAAAGCCTCAGGTCTGGTGTGATCATTGCAATAAACCTCGACATACACGTAAAACCTGTCGGAAACTTCATGGAAAACCTGCTAATTGGAAGAGTTCTAAACAAAGTGACAGACACTCCTATCAACATATCTCCAGTGCGAATGTGACTGAATCCAATTTGTGTGGGCATATGGATAAAAAGACTACTAGAAGAGTTGAAATTCTATCAGACAATTCCCATGCGAATTTATTGTGATAATAAGGCAGCAATTTCTATTGCCCACAATCCTGTCCTTCATGATAGGACAAAACATATTGAAGTTGATAAACACTTCATAAAGGAGAAGATTGATGCTCGAATAATATGCATACCCTATCTCCCAAAACAAATTGCAGATGTGTTAACTAAAGGTCTTCCAAAGTGGCAATTCAACAACTTGATTGACAAGCTGGCCATGAATGATATCTTCCAACCAGCTTGAGGGGGAGTGTTGATTATTTCCTATTTTGTCAATATTTTCACTGTATTTATTTTAGTATATTTGCCATATTTATTTTTTCCTTATTTGTAATTGGGTATTTCTTCTATTTAAGAAAACCCTCTTTGCCTAGTGAGTAATAAGAGAAAATTATACATTTTTGAACATGTTATCAGAGCAGTAATAAGAAAAGAAAAAAAAAAACCCTAAAATTTTTTTTCTAACCCTAACCCTAGTCTCTGCCGCCGCCGCCGCTACCCTCAACCACCGCCACCATCCTTCAGCTCGTGTGCGCTGTCCTTCAGCTCGATCGACTAGGTCTTCGATGAAGCAAGCGAGCTCGTGCGCATCTAAAGCCGTCTGCCAGATCCGACATCTGAAGCTCATCCAAAACCGTCCGTCGGCCAGATCCGACATCTGGAGCTCGTGCGCATCCGAAGCCGTCGTCTGAGCCCTTCACCGGCCTTGTGGGTTTTGTTTCGCACCTCACCGGACGCCGCCCAGCCCTTCATCCGACGTTTCGCGCCTTGTCGACTGTCGTTCAGGTCTCGCCGGTTGTTTCGCCCCTCGCCGGCCGGTCTTCAGCAGTCGCCGGTCAATATTGTCTCTCTGTTTTTCGTGGGTGCTTGTCTCTCTTTTTTTTTTTGTGGATATTCCTTTTTTTTAGCAATCATGGCTGAAGAAAAATTACCTATTGCTAAAGTTTCAAAAAATCGAATCCACTCCAACACTCCTACTGTCCAAATTACTTCCATTCGACTTAAAGGGGATAACTTCCTTCGTTGGTCCCAAAGTGTTCGAATGTACATTCGTGGGCAAGGGAAGATTGGCTATATTACAGGAGAACAAAACACCCCTAAACCAGATGACCCTTCCTTTGCAGCGTGGGATGCTGAAAATTCTATGGTCATGACTTGGCTCGTCAATTCCATGGCTGAGGATATCAGCTGCAATTATATGTGCTACTCAACGGCAAACGAATTATGGGATAGTGTGACACAGATGTATTCTGATTTGGGAAACCAGTCACAAGTATTTGAATTGAATCTCAAATTAGGAGATATGCGTCAGGGAAGTCACTCGGTCACACAATATTTTCACTCCCTTAAAAAAATTTGGCAAGACCTATATCTCTTTGATACATATGAGTGGAAGTCTACAGATGACCAAAAACATTACAGAAAAACTGTGGAAGATGGTCGTATTAAAAAATTTCAAATTTCTTGCAGGCCTCAATGTTGAATTTGATAAGGTTCGAGGTAGAATTCTTGGAAAAACTACTCTTCCTACTATTAATGATGTTTTTTCTGAAGTTCGCAGGAAAAAAAGTCGCATAAACGTAATGATTGGAAAAAAACCCATTGAGCCAGTCGAGAGCTATGCGTTGGTAACTGAACATACTGCCATGAAAGCCTTTGATAATTCCAACAGGACACATGAAAAGCCTCGGGTCTGGTGTGATCATTGCAATAAACCTCGACATACACGAAAAACCTGTCGGAAACTTCATGGAAAACCTGCTAATTGGAAGAGTTCTAAACAAAGTGACAGACACTCCTATCAATATATCTCCAGTGCGAATGTGACTGAATCCAATTTGTGTGGGCATATGGATAAAAAGACTACTAGAAGAGTTGAAATTCTATCAGACAATTCCCATGCGAATTTATTGTGATAATAAGGCAGCAATTTCTATTACCCACAATCCTATCCTTCATGATAGGACAAAACATATTGAAGTTGATAAACACTTCATAAAGGAGAAGATTGATGCTCGAATAATATGCATACCCTATCTCCCAAAACAAATTGCAGATGTGTTAACTAAAGGCCTTCCAAAGTGGCAATTCAACAACTTGATTGACAAGCTGGCCATGAATGATATCTTCCAACCAGCTTGAGGGGGAGTGTTGATTATTTCCTATTTTGTCAATATTTTCACTGTATTTATTTTAGTATATTTGCCATATTTATTTTTTCCTTATTTGTAATTGGGTATTTCTTCTATTTAAGAAAACCCTCTTTGCCTAGTGAGTAATAAGAGAAAATTATACATTTTTGAACAAATCTCAATTGGAGTAATATCTCCCCATTGAAGGAAAAAAAATTCCCCTTTTTGGATCTGTAATTTCAATTGTAGTAGGGATAAAACAACAAAGGTTTCTTTGAACCTCAATGTGAGTGCACTACAATCTAACAAATTTAAGGTCTCAGATGAAACTTAAATTAAACCACCAAAGTGATGTCCTACTGCATCGAAAGTGCACATATTCCAATTATGATGAGGTAAGAGGTAAGTTCATTTTAATCCAACCTCCATAACCTTTGAAGAATTCAAGTTTACTATGTTTGCTAATATCCCATTTGTTAAACTTCAACTAGAAATGACCAAATTGGTATCAGAGCGCCTTCGTGAAAGGGTCTAATGGTGATCAAAAACACCAACAAGAATCCCGATTCTCCTACCTTAGATGCGGAAGCATCATCTTTCTCCCCCCAATCCGTCAACCAACAATTAATTCTTGTAGAAACTTCTCGAAGAAAGTTAAACGTAAAATTGCTTGAAATTCAAACCAAAATGGCTAGAATCATGGCCACAAATTTGCGCATCCAACAAGCTGTAGAAAATCTTGCTCAAAAAGTGATAAAGATTCCAAATGCACAACTCCAAATAATGCCATCCCTTCCCAAGAACAACACCATAACCTTGCACGCATTCAAGAACAACACGACAATTCAATCCGCAGCCAAGAATGTGGAATTTTCATCAAGATTTTCACGGGCATGATCAACAAAATTGCCAAGAAAATCATAGACAACCAATTCAACCTCCAAGAAGACTAGAAATTCATAACCAAGAAAATTCAAGAATGCAAGAAGTCCACCAAGAAGCTTCATCCAAAGAAATCAACCGGGTATGAACAATTATAATCCAGTTTTTGAACACCACCATCCTCCTCATAGACCTTTTCTTCAAAATGTGCTTGAGTTTGATTATGAAACATCAAAAAAAGAAGTTGGTTGGCAAAGTTTTTCTCTCTTTTCATATGGAAATCATGAGCAACAACACCGATTCAAGAATGTCAAAGAATGGGTTCAAGAATCGTTTCAACATCAAACGGGCATTCAACCAAATGTTCAAGAACATGTCGTTGTCCTTCAAGAACATCAAGGCAACACACATCGAGTCCAAAATCGAGTGGTCATGCTGCAAGAACATGAAGATAGGATTACAAATTTTAATGTTTTAGGTTGTTAGTTGACTATGCTCCCAATGGAACCAATTTTGACCGTTGTTGCCCGTCACAATATCAGAGACCCTTTTCTATGCCACTTAAGAAGAAGGATGTTGTAGAGACTGCAAAATCCCAATTTTCACGAAATCATAGTGATCACCTTGTTATTATCCGGGCCTATGGGGGACGGAAAGAAGTTGAGAAGAACTTTGGTGGATATGACATCTATTGGAAGAACTTTCTTTCTGTACAATGAGTGAAGGCTATTGATTCACTAAGGAAGGAGTTCTTTTCTTTGCTTAAAGATATTGGCTTGGTCAATGGGTATTTGAGCACCTACAACACTTTGAGTTTTGATGAACTTGATGAAAATTTTATGTCTTGGAGTTTTTTTCATAATATTTTTGTTCAAGATGTAGGAAGTTGGTTTGGCCATGCTCCGTTTTACAAGTTTATTTTATTTCTTAATTGTTTCATTTTTCTTCTTCTTTTTAAAACTCGGGACGAGTTTTCTTTTTGGAGGGGTAGAATGATGTAAGTAGAAAGGGATTTAGTTGGATAATTGGATAAAAATATAGGTTAATTACCTTTTCACCCCCCACATGTATTAAAACTCTATAAATAGGAGTCTTCCCCCATGTATGGACAATTAATGAATAAGATTTTCCTTCAAGAATTCTCTAAGATTCGTAGTCTACATCAGTAAAGTGAAGGTCAAGGCACCAAATGGATGATAGAGCAAAAGAATTCAAATGAAAAGGACAAAAAGTATTGAAAAAGACACAAAAGAAGCCTGCAAAGAAGCCGCAATAGAAAAAGGCAGCACTGAACGATCAATAACAGGCTGGTGGTCGTGACAATTTTGGACGTAACGACGACACGAAGGTTGAGGATGAAAGAAGAGATGCCGGAAGCAGAGGGAGGACGGGAGCAGGAGAACAGCTAGGCACCTCAAGCTTAAACCTGACTAAGGTATCAACGACAATGAATAGCAACAAAGAAAGACTGGCGGCAAATGGACGCAGCACCAATGACAGAAGCAGCGGTAACAACAACAAAAGTTGA

mRNA sequence

ATGAACGGAAGCGGTAGAGGCGAACGGCGGACGGCGGCAATGGGCGGCCGGCGAAGCAGACAAGGTCGGCCGACCAGGACAGACAATTCCGGCGAGCAGTCGATGAAGGTCATACAACGTGCGGTCGAGTTGTTAGTTGACTATGCTCCCAATGGAACCAATTTTGACCGTTGTTGCCCGTCACAATATCAGAGACCCTTTTCTATGCCACTTAAGAAGAAGGATGTTGTAGAGACTGCAAAATCCCAATTTTCACGAAATCATAGTGATCACCTTGTTATTATCCGGGCCTATGGGGGACGGAAAGAAGTTGAGAAGAACTTTGGTGGATATGACATCTATTGGAAGAACTTTCTTTCTGCTGGTGGTCGTGACAATTTTGGACGTAACGACGACACGAAGGTTGAGGATGAAAGAAGAGATGCCGGAAGCAGAGGGAGGACGGGAGCAGGAGAACAGCTAGGCACCTCAAGCTTAAACCTGACTAAGGTATCAACGACAATGAATAGCAACAAAGAAAGACTGGCGGCAAATGGACGCAGCACCAATGACAGAAGCAGCGGTAACAACAACAAAAGTTGA

Coding sequence (CDS)

ATGAACGGAAGCGGTAGAGGCGAACGGCGGACGGCGGCAATGGGCGGCCGGCGAAGCAGACAAGGTCGGCCGACCAGGACAGACAATTCCGGCGAGCAGTCGATGAAGGTCATACAACGTGCGGTCGAGTTGTTAGTTGACTATGCTCCCAATGGAACCAATTTTGACCGTTGTTGCCCGTCACAATATCAGAGACCCTTTTCTATGCCACTTAAGAAGAAGGATGTTGTAGAGACTGCAAAATCCCAATTTTCACGAAATCATAGTGATCACCTTGTTATTATCCGGGCCTATGGGGGACGGAAAGAAGTTGAGAAGAACTTTGGTGGATATGACATCTATTGGAAGAACTTTCTTTCTGCTGGTGGTCGTGACAATTTTGGACGTAACGACGACACGAAGGTTGAGGATGAAAGAAGAGATGCCGGAAGCAGAGGGAGGACGGGAGCAGGAGAACAGCTAGGCACCTCAAGCTTAAACCTGACTAAGGTATCAACGACAATGAATAGCAACAAAGAAAGACTGGCGGCAAATGGACGCAGCACCAATGACAGAAGCAGCGGTAACAACAACAAAAGTTGA

Protein sequence

MNGSGRGERRTAAMGGRRSRQGRPTRTDNSGEQSMKVIQRAVELLVDYAPNGTNFDRCCPSQYQRPFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLSAGGRDNFGRNDDTKVEDERRDAGSRGRTGAGEQLGTSSLNLTKVSTTMNSNKERLAANGRSTNDRSSGNNNKS

Homology

[Close]

BLAST of Lsi01G019310 vs. ExPASy Swiss-Prot
Match: F4HYJ7 (DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana OX=3702 GN=At1g48650 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFS-RNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLSA 122
           PF MP  KKD+ ETA+S+FS R++SDHL ++RAY G K+ E+   GYD  WKNFLS+
Sbjct: 821 PFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSS 877

[Close]

BLAST of Lsi01G019310 vs. ExPASy Swiss-Prot
Match: F4IM84 (DExH-box ATP-dependent RNA helicase DExH5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g01130 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.8e-12
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF  P  KKD+ E AKSQFSR+HSDHL ++RAY G K+ E+    YD  WKNFLS
Sbjct: 741 PFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDYCWKNFLS 795

[Close]

BLAST of Lsi01G019310 vs. ExPASy Swiss-Prot
Match: F4ILR7 (DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana OX=3702 GN=At2g35920 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.7e-05
Identity = 21/59 (35.59%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 63  YQRPFSMPLKKKDVVETAKSQFSRNH-SDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           Y+ PF +PL +K+  + AK  F+ +  SDH+ +++AY G ++ ++     D  W+NFLS
Sbjct: 743 YRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLS 801

[Close]

BLAST of Lsi01G019310 vs. ExPASy TrEMBL
Match: A0A6J1FZ75 (DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111449254 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.3e-15
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF MPL+KKD  E AKSQFS++HSDHL IIRAY G KE E+NFGGYD  WKNFLS
Sbjct: 806 PFLMPLEKKDAAEAAKSQFSQDHSDHLAIIRAYRGWKEAERNFGGYDFCWKNFLS 860

[Close]

BLAST of Lsi01G019310 vs. ExPASy TrEMBL
Match: A0A5A7SZF7 (DExH-box ATP-dependent RNA helicase DExH5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G006110 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 8.3e-15
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF  PL+KKD  E AKSQFS++HSDHL IIRAYGG KE E+N+GGYD  WKNFLS
Sbjct: 797 PFLTPLEKKDAAEAAKSQFSQDHSDHLAIIRAYGGWKEAERNYGGYDFCWKNFLS 851

[Close]

BLAST of Lsi01G019310 vs. ExPASy TrEMBL
Match: A0A5D3CFK3 (DExH-box ATP-dependent RNA helicase DExH5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001370 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 8.3e-15
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF  PL+KKD  E AKSQFS++HSDHL IIRAYGG KE E+N+GGYD  WKNFLS
Sbjct: 768 PFLTPLEKKDAAEAAKSQFSQDHSDHLAIIRAYGGWKEAERNYGGYDFCWKNFLS 822

[Close]

BLAST of Lsi01G019310 vs. ExPASy TrEMBL
Match: A0A1S3BFL6 (DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489319 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 8.3e-15
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF  PL+KKD  E AKSQFS++HSDHL IIRAYGG KE E+N+GGYD  WKNFLS
Sbjct: 847 PFLTPLEKKDAAEAAKSQFSQDHSDHLAIIRAYGGWKEAERNYGGYDFCWKNFLS 901

[Close]

BLAST of Lsi01G019310 vs. ExPASy TrEMBL
Match: A0A1S3BF36 (DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489319 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 8.3e-15
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF  PL+KKD  E AKSQFS++HSDHL IIRAYGG KE E+N+GGYD  WKNFLS
Sbjct: 847 PFLTPLEKKDAAEAAKSQFSQDHSDHLAIIRAYGGWKEAERNYGGYDFCWKNFLS 901

[Close]

BLAST of Lsi01G019310 vs. NCBI nr
Match: XP_038892223.1 (DExH-box ATP-dependent RNA helicase DExH5, mitochondrial [Benincasa hispida])

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-15
Identity = 42/55 (76.36%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF  PL+KKDV E AKSQFS++HSDHL IIRAYGG KE E+NFGGYD  WKNFLS
Sbjct: 797 PFLTPLEKKDVAEAAKSQFSQDHSDHLAIIRAYGGWKEAERNFGGYDFCWKNFLS 851

[Close]

BLAST of Lsi01G019310 vs. NCBI nr
Match: KAG6573930.1 (DExH-box ATP-dependent RNA helicase DExH5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-14
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF MPL+KKD  E AKSQFS++HSDHL IIRAY G KE E+NFGGYD  WKNFLS
Sbjct: 838 PFLMPLEKKDAAEAAKSQFSQDHSDHLAIIRAYRGWKEAERNFGGYDFCWKNFLS 892

[Close]

BLAST of Lsi01G019310 vs. NCBI nr
Match: XP_022944845.1 (DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-14
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF MPL+KKD  E AKSQFS++HSDHL IIRAY G KE E+NFGGYD  WKNFLS
Sbjct: 806 PFLMPLEKKDAAEAAKSQFSQDHSDHLAIIRAYRGWKEAERNFGGYDFCWKNFLS 860

[Close]

BLAST of Lsi01G019310 vs. NCBI nr
Match: KAG7012994.1 (DExH-box ATP-dependent RNA helicase DExH5, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-14
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF MPL+KKD  E AKSQFS++HSDHL IIRAY G KE E+NFGGYD  WKNFLS
Sbjct: 874 PFLMPLEKKDAAEAAKSQFSQDHSDHLAIIRAYRGWKEAERNFGGYDFCWKNFLS 928

[Close]

BLAST of Lsi01G019310 vs. NCBI nr
Match: XP_023541029.1 (DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023541030.1 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-14
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF MPL+KKD  E AKSQFS++HSDHL IIRAY G KE E+NFGGYD  WKNFLS
Sbjct: 806 PFLMPLEKKDAAEAAKSQFSQDHSDHLAIIRAYRGWKEAERNFGGYDFCWKNFLS 860

[Close]

BLAST of Lsi01G019310 vs. TAIR 10
Match: AT1G48650.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-13
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFS-RNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLSA 122
           PF MP  KKD+ ETA+S+FS R++SDHL ++RAY G K+ E+   GYD  WKNFLS+
Sbjct: 821 PFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSS 877

[Close]

BLAST of Lsi01G019310 vs. TAIR 10
Match: AT1G48650.2 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-13
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFS-RNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLSA 122
           PF MP  KKD+ ETA+S+FS R++SDHL ++RAY G K+ E+   GYD  WKNFLS+
Sbjct: 821 PFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSS 877

[Close]

BLAST of Lsi01G019310 vs. TAIR 10
Match: AT2G01130.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-13
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFSRNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           PF  P  KKD+ E AKSQFSR+HSDHL ++RAY G K+ E+    YD  WKNFLS
Sbjct: 741 PFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDYCWKNFLS 795

[Close]

BLAST of Lsi01G019310 vs. TAIR 10
Match: AT5G04895.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 25/57 (43.86%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 66  PFSMPLKKKDVVETAKSQFS-RNHSDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLSA 122
           PF +P  KKD+  +AK +FS +++SDH+ ++RA+ G K+ E+    Y+  W+NFLSA
Sbjct: 782 PFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKDAEREGSAYEFCWRNFLSA 838

[Close]

BLAST of Lsi01G019310 vs. TAIR 10
Match: AT2G35920.1 (RNA helicase family protein )

HSP 1 Score: 49.3 bits (116), Expect = 4.1e-06
Identity = 21/59 (35.59%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 63  YQRPFSMPLKKKDVVETAKSQFSRNH-SDHLVIIRAYGGRKEVEKNFGGYDIYWKNFLS 121
           Y+ PF +PL +K+  + AK  F+ +  SDH+ +++AY G ++ ++     D  W+NFLS
Sbjct: 743 YRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLS 801

The following BLAST results are available for this feature:

BLAST of Lsi01G019310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HYJ7	2.2e-12	57.89	DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
F4IM84	4.8e-12	60.00	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial OS=Arabidopsis thaliana...	[more]
F4ILR7	5.7e-05	35.59	DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana OX=3702 GN=At2...	[more]

BLAST of Lsi01G019310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZ75	6.3e-15	74.55	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like OS=Cucurbita mosch...	[more]
A0A5A7SZF7	8.3e-15	72.73	DExH-box ATP-dependent RNA helicase DExH5 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5D3CFK3	8.3e-15	72.73	DExH-box ATP-dependent RNA helicase DExH5 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BFL6	8.3e-15	72.73	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X2 OS=Cucumis m...	[more]
A0A1S3BF36	8.3e-15	72.73	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1 OS=Cucumis m...	[more]

BLAST of Lsi01G019310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892223.1	2.6e-15	76.36	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial [Benincasa hispida]	[more]
KAG6573930.1	1.3e-14	74.55	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial, partial [Cucurbita arg...	[more]
XP_022944845.1	1.3e-14	74.55	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like [Cucurbita moschat...	[more]
KAG7012994.1	1.3e-14	74.55	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial, partial [Cucurbita arg...	[more]
XP_023541029.1	1.3e-14	74.55	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like [Cucurbita pepo su...	[more]

BLAST of Lsi01G019310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48650.1	1.5e-13	57.89	DEA(D/H)-box RNA helicase family protein	[more]
AT1G48650.2	1.5e-13	57.89	DEA(D/H)-box RNA helicase family protein	[more]
AT2G01130.1	3.4e-13	60.00	DEA(D/H)-box RNA helicase family protein	[more]
AT5G04895.1	1.1e-08	43.86	DEA(D/H)-box RNA helicase family protein	[more]
AT2G35920.1	4.1e-06	35.59	RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..25
None	No IPR available	PANTHER	PTHR18934:SF146	DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL	coord: 65..121
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 65..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G019310.1	Lsi01G019310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity