Lsi01G016100 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTTGGTAGGAATTGAGCTTGGGAAAATTGAAGAGTTCAAGAAGTGAGATGATATTTGTGCCAAATTTGCTTGGAAGCAAAACCTCTTTCTCCATTGAGCTCAAATTTTCAAACTTAAATATATTGAAAAATCATTCCCATTCAAAAATCATCTCTATTTCTGATCAAATCTCCATTGCCTTTCTTCTTCTTTCCCTTTACTTTCTTTACACTTACATTTCTTCATTCTTTAAACCCAAATAAAACCAATATACAAATAAAAATCCTTCCTTTTTTCTTCCCCCCTCTTTGTGATTTGATATATACATATATTTCTATTCAAAGTTTTTTAATATAGATTTCATTGATTGATTATTGGTTTTGTATAGAAATTGTGGTGTGGGCATTTGGGTTTGAAAATATTTCTACACATTATTTGTGTTTATTGAATATATACATACATTGTAATATAAGTGTGGAATATTTGGGAATGAATCTCTTATCTTAGAGTGGGAGAAATAAGAAAGTTTCGAGTGTATTAATGTCGAAGTTTCTTTGTAAATTTACATTTTTTTTAACGTTGTTTATACATTAAGCAATACTGTGTATTGATGATAGTGATTTTCTCTT ATGGTTTTGGAATTGAGCTTGGGAAAATTGAAGAGTTCAAGAAGTGAGATGATATTTGTGCCAAATTTGCTTGGAAGCAAAACCTCTTTCTCCATTGAGCTCAAATTTTCAAACTTAAATATATTGAAAAATCATTCCCATTCAAAAATCATCTCTATTTCTGATCAAATCTCCATTGCCTTTCTTCTTCTTTCCCTTTACTTTCTTTACACTTACATTTCTTCATTCTTTAAACCCAAATAAAACCAATATACAAATAAAAATCCTTCCTTTTTTCTTCCCCCCTCTTTGTGATTTGATATATACATATATTTCTATTCAAAGTTTTTTAATATAGATTTCATTGATTGATTATTGGTTTTGTATAGAAATTGTGGTGTGGGCATTTGGGTTTGAAAATATTTCTACACATTATTTGTGTTTATTGAATATATACATACATTGTAATATAAGTGTGGAATATTTGGGAATGAATCTCTTATCTTAGAGTGGGAGAAATAAGAAAGTTTCGAGTGTATTAATGTCGAAGTTTCTTTGTAAATTTACATTTTTTTTAACGTTGTTTATACATTAAGCAATACTGTGTATTGATGATAGTGATTTTCTCTT ATGGTTTTGGAATTGAGCTTGGGAAAATTGAAGAGTTCAAGAAGTGAGATGATATTTGTGCCAAATTTGCTTGGAAGCAAAACCTCTTTCTCCATTGAGCTCAAATTTTCAAACTTAAATATATTGAAAAATCATTCCCATTCAAAAATCATCTCTATTTCTGATCAAATCTCCATTGCCTTTCTTCTTCTTTCCCTTTACTTTCTTTACACTTACATTTCTTCATTCTTTAAACCCAAATAA MVLELSLGKLKSSRSEMIFVPNLLGSKTSFSIELKFSNLNILKNHSHSKIISISDQISIAFLLLSLYFLYTYISSFFKPK Homology
BLAST of Lsi01G016100 vs. ExPASy TrEMBL
Match: A0A1S3CIU6 (uncharacterized protein LOC103501456 OS=Cucumis melo OX=3656 GN=LOC103501456 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.3e-22 Identity = 63/80 (78.75%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Lsi01G016100 vs. ExPASy TrEMBL
Match: A0A6J1GEV0 (uncharacterized protein LOC111453527 OS=Cucurbita moschata OX=3662 GN=LOC111453527 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 8.1e-17 Identity = 51/79 (64.56%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of Lsi01G016100 vs. ExPASy TrEMBL
Match: A0A6J1ITI2 (uncharacterized protein LOC111478267 OS=Cucurbita maxima OX=3661 GN=LOC111478267 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.8e-14 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Lsi01G016100 vs. ExPASy TrEMBL
Match: A0A6J1CSG7 (uncharacterized protein LOC111013795 OS=Momordica charantia OX=3673 GN=LOC111013795 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.2e-13 Identity = 52/77 (67.53%), Postives = 59/77 (76.62%), Query Frame = 0
BLAST of Lsi01G016100 vs. ExPASy TrEMBL
Match: A0A5B6YL99 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_002015 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.0e-06 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 0
BLAST of Lsi01G016100 vs. NCBI nr
Match: XP_008463252.1 (PREDICTED: uncharacterized protein LOC103501456 [Cucumis melo]) HSP 1 Score: 115.2 bits (287), Expect = 2.7e-22 Identity = 63/80 (78.75%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Lsi01G016100 vs. NCBI nr
Match: XP_038881407.1 (uncharacterized protein LOC120072944, partial [Benincasa hispida]) HSP 1 Score: 113.2 bits (282), Expect = 1.0e-21 Identity = 65/78 (83.33%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of Lsi01G016100 vs. NCBI nr
Match: XP_011653719.1 (uncharacterized protein LOC101207912 [Cucumis sativus] >KAE8649590.1 hypothetical protein Csa_012180 [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 3.3e-20 Identity = 60/80 (75.00%), Postives = 71/80 (88.75%), Query Frame = 0
BLAST of Lsi01G016100 vs. NCBI nr
Match: XP_022950423.1 (uncharacterized protein LOC111453527 [Cucurbita moschata]) HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16 Identity = 51/79 (64.56%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of Lsi01G016100 vs. NCBI nr
Match: XP_023544633.1 (uncharacterized protein LOC111804157 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 95.1 bits (235), Expect = 2.9e-16 Identity = 51/79 (64.56%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of Lsi01G016100 vs. TAIR 10
Match: AT2G38500.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 41.6 bits (96), Expect = 3.5e-04 Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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