Lsi01G010920 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTTGGTCCTACGGACCGTGAACGGATTCGCCTCTGGCCTCTGGGTACGTCGGAACCGCATAAGTTCACCGGGGTGGAGCACGGTCCGCCAAAATCGGCATAGGTTAGGTGCTATTGATGGAACATGGTAAGCCTATCTTTCTCCATATGGAAGTGCTGCGGGCACATAGAGATGTGGGTAGAGGAAGCCTCAAAAAGCGAAGGCCGAGCTGTAGGTCACGTGACCTGCACCGAGTTGGTGGCTGACTGGGCTTTTTCCTAGATCAAAGCGGATCAGCTCGCCTTCTTGTTATCCAAAAGTCGGTCGAATCGGGCGGGCCCCCGCCCCGGAACGTCGAATGAAATAGGTGGCCGGGTTCTCTTTCGACAACCCTTTTGATATGATAGGCCCGGCCACCTTCCCCCTATCCCTTATGTTTAGGAGCGGGATCCGCCCAAGAACGACCAGTCCCGTGGTGGTACGTAAGGCACGGACTCCGCGAACGTCCCGCGCCCCCTTTACTAATAAAGGAAAGAAAGCCTCAACCAGAACCACATTCCTTTTGCGTGCGGATGTAGCTAAGTGTCTGACTCTATTGGTCATAGTTCCCTGCTGTTGCGGCCGGTGCTCGTTTGCGCGCGCGTGAACCAACCCAACAAACAAGGAAAGGATGCCTCTCGGGGCATCTGAGAATGATTCGAGCTGTATGAAGGGAAACTCTCACGTACAGTTTGTTTTTTTTTGGGGGGGGAAGGAGCCCGACAGGGTCCCCCCACTGACTTGGCCCGGGCCTAAGTGAAAGTGAAGTGGTGGGCCTACCCATCCCAACCAGGGGTATGCTGGGATTTGCGAAGAGCAGCACCTTACGATGTTCATGACCAATTGGATCCTGACGTACCAGTAGGTACCAGAGGAGATCGCTATGATCGTTACTGTATCCGTATCGAAGAGATGCGACAAAGTGTTCGGATCATTGTGCAATGTCCTAATCAAATGCCTAGTGGCATGATCAAAGCCGATGATCGTAAGCTATGTCCTCCATCACGATCTCGAATGAAACTATCCATGGAATCGTGTGCCGTGTGAAACGTAGATCATCGCCGTTCTTAACCGAGACTCAGGTTAAGCTCCGTCTCGGAACCTTGTGGGGTTAGGAGTAAAGCATCCCGAGGTTGACGCATCTCGTTGGGCGTGGAGAAACATTGGGAACCAAAATAGCTTTCTTCGGAGCCGTTTCTTGTCCCGTCCCCCCGCCCCGGCATAGCGCTTCGCTTTCGGTGATTCGGAAGAATCAACTTACTTCTCCCTTCTTCATTGATCTGGGGGAAAAGGAACCGTCTACCTGTTGGGAAGCTAGACATTAAGTAAGTGGCTTGATGAGGATAACTAAGCTGACACGCCGGAGTTGGCTGCTGGCACAACTGGGTGGTGCCTTACCGCACCGCAGGTGAACGCGCGGTAGCGTTCGTGGTGGTGCTTCAGGATTCCAATGTACTGCATCCAAGATCAGAACGAGCTTGCCGGCGGACCATTGCCGTCCCATTCTTGAGTGAGCTGGAGCGCAGCCATCTTATCCACTGAACTAGCTAGAAGCTATTGCTTCGGGTCGAAGCACTAAAAGAAAAGGACCAGGAAACGCGGCGGTATAGGAACCACGGGACCCCCCCACTAGTCTAGTAAAGGGAAAACAGAAGTGCGCTCCTGCGCACCAGCTGAAAAAGCCCTTTACCCTTTGAATAATAAGGTCAGCTTCATAGTTCCAACCTAGATAAGGCTTTTTTATGCCCTTTTTTTAGGTTGGGTTGCTGGATACGGGATCCTCGTAGTAGGCTGGACCAACATCCAGCCGAGAGAGGGCAGCCTTTAGAAGCAAGAGGTTGGGAAACCAAGAGAACGCTTCGCGTTTTCTTATCTTTTTCCCGCTCTAGGAGTAGGAGTAGCACAAAAAGAGGGATTTGGATTATTGACCCAATGAGAAACCACTAACATCTTCCTCGTTGGGGCTTCGCGCACTGGGAAAACGCTAACGCGACGGGAAATCGGCCACTAGTAACAAAGCGAACATAAGGTATCGAGAGGGCTATCACAGTAAGGTGCGAATTACCCCCTATTTTGAAAGTACCCCTCTTCCTATTTAGGTAGGGGGTTGAGGCGAGAAATGGCTTGATGAACCGTTCCGTTCGCCACGCACCGGCCCCATTCACTTGCTTATCGTAGAGGCTTTCAGTATACAGTGCCCCACAACTATTCATAGTATAGTGGGGTTGAAACACGAGAGTGCCCGCCCTTTCTTTCAAGTAGGCCACTTTTTCCGGAACGCAGCCCGGGATAAGCGTGACCGTGTATATATATCTATATCTATATATATCTTCGATGCTGTCATTTCGAAATGTCCGCTTCAACCGCTGTTTCAACTACCAAAAAGCTAAGTTGGCTTGACGAGCGCAGATGTGAGGAAGCGGGGGGAGCAATAAAACAACAAATCTCTCGCTTAAGGCTTTCATCGTAAGGGGCAAAGAGAAGCGCTTTTGCTACTGAGAAAGTGAACGGTCAGCGCGAAGGTTCAAGACTTAGCCGAGCATTAGCGAAGCGTCATTCTCATAGTGAGGCGCTTCGAGTTTTCGAAGCGCTGTAG ATGGTGTTGGTCCTACGGACCGTGAACGGATTCGCCTCTGGCCTCTGGGTACGTCGGAACCGCATAAGTTCACCGGGGTGGAGCACGGTCCGCCAAAATCGGCATAGGTTAGGTGCTATTGATGGAACATGTTGGTGGCTGACTGGGCTTTTTCCTAGATCAAAGCGGATCAGCTCGCCTTCTTGTTATCCAAAAGCCCGGCCACCTTCCCCCTATCCCTTATGTTTAGGAGCGGGATCCGCCCAAGAACGACCAGTCCCGTGGTGGTACTTCCCTGCTGTTGCGGCCGGTGCTCGTTTGCGCGCGCGTGAACCAACCCAACAAACAAGGAAAGGATGCCTCTCGGGGCATCTGAGAATGATTCGAGCTTGGTGGGCCTACCCATCCCAACCAGGGGTATGCTGGGATTTGCGAAGAGCAGCACCTTACGATGTTCATGACCAATTGGATCCTGACGTACCAGTAGGTACCAGAGGAGATCGCTATGATCGTTACTGTATCCGTATCGAAGAGATGCGACAAAGTGTTCGGATCATTGTGCAATGTCCTAATCAAATGCCTAGTGGCATGATCAAAGCCGATGATCGTAAGCTATGTCCTCCATCACGATCTCGAATGAAACTATCCATGGAATCGTGTGAACGCGCGGTAGCGTTCGTGGTGGTGCTTCAGGATTCCAATGTACTGCATCCAAGATCAGAACGAGCTTGCCGGCGGACCATTGCCGTCCCATTCTTGAGTCAGCTTCATAGTTCCAACCTAGATAAGGCTTTTTTATGCCCTTTTTTTAGGTTGGGTTGCTGGATACGGGATCCTCGTAGTAGGCTGGACCAACATCCAGCCGAGAGAGGGCAGCCTTTAGAAGCAAGAGAGGCTTTCAGTATACAGTGCCCCACAACTATTCATAGTATAGTGGGGTTGAAACACGAGAGTGCCCGCCCTTTCTTTCAAGTAGGCCACTTTTTCCGGAACGCAGCCCGGGATAAGCGTGACCGTGTATATATATCTATATCTATATATATCTTCGATGCTGTCATTTCGAAATGGGCAAAGAGAAGCGCTTTTGCTACTGAGAAAGTGAACGGTCAGCGCGAAGGTTCAAGACTTAGCCGAGCATTAGCGAAGCGTCATTCTCATAGTGAGGCGCTTCGAGTTTTCGAAGCGCTGTAG ATGGTGTTGGTCCTACGGACCGTGAACGGATTCGCCTCTGGCCTCTGGGTACGTCGGAACCGCATAAGTTCACCGGGGTGGAGCACGGTCCGCCAAAATCGGCATAGGTTAGGTGCTATTGATGGAACATGTTGGTGGCTGACTGGGCTTTTTCCTAGATCAAAGCGGATCAGCTCGCCTTCTTGTTATCCAAAAGCCCGGCCACCTTCCCCCTATCCCTTATGTTTAGGAGCGGGATCCGCCCAAGAACGACCAGTCCCGTGGTGGTACTTCCCTGCTGTTGCGGCCGGTGCTCGTTTGCGCGCGCGTGAACCAACCCAACAAACAAGGAAAGGATGCCTCTCGGGGCATCTGAGAATGATTCGAGCTTGGTGGGCCTACCCATCCCAACCAGGGGTATGCTGGGATTTGCGAAGAGCAGCACCTTACGATGTTCATGACCAATTGGATCCTGACGTACCAGTAGGTACCAGAGGAGATCGCTATGATCGTTACTGTATCCGTATCGAAGAGATGCGACAAAGTGTTCGGATCATTGTGCAATGTCCTAATCAAATGCCTAGTGGCATGATCAAAGCCGATGATCGTAAGCTATGTCCTCCATCACGATCTCGAATGAAACTATCCATGGAATCGTGTGAACGCGCGGTAGCGTTCGTGGTGGTGCTTCAGGATTCCAATGTACTGCATCCAAGATCAGAACGAGCTTGCCGGCGGACCATTGCCGTCCCATTCTTGAGTCAGCTTCATAGTTCCAACCTAGATAAGGCTTTTTTATGCCCTTTTTTTAGGTTGGGTTGCTGGATACGGGATCCTCGTAGTAGGCTGGACCAACATCCAGCCGAGAGAGGGCAGCCTTTAGAAGCAAGAGAGGCTTTCAGTATACAGTGCCCCACAACTATTCATAGTATAGTGGGGTTGAAACACGAGAGTGCCCGCCCTTTCTTTCAAGTAGGCCACTTTTTCCGGAACGCAGCCCGGGATAAGCGTGACCGTGTATATATATCTATATCTATATATATCTTCGATGCTGTCATTTCGAAATGGGCAAAGAGAAGCGCTTTTGCTACTGAGAAAGTGAACGGTCAGCGCGAAGGTTCAAGACTTAGCCGAGCATTAGCGAAGCGTCATTCTCATAGTGAGGCGCTTCGAGTTTTCGAAGCGCTGTAG MVLVLRTVNGFASGLWVRRNRISSPGWSTVRQNRHRLGAIDGTCWWLTGLFPRSKRISSPSCYPKARPPSPYPLCLGAGSAQERPVPWWYFPAVAAGARLRAREPTQQTRKGCLSGHLRMIRAWWAYPSQPGVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPSRSRMKLSMESCERAVAFVVVLQDSNVLHPRSERACRRTIAVPFLSQLHSSNLDKAFLCPFFRLGCWIRDPRSRLDQHPAERGQPLEAREAFSIQCPTTIHSIVGLKHESARPFFQVGHFFRNAARDKRDRVYISISIYIFDAVISKWAKRSAFATEKVNGQREGSRLSRALAKRHSHSEALRVFEAL Homology
BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot
Match: Q36450 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.0e-40 Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot
Match: P93306 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAD7 PE=1 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 3.5e-38 Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot
Match: Q9TC96 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea OX=31312 GN=NAD7 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.8e-26 Identity = 55/81 (67.90%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot
Match: O21270 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483 GN=NAD7 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.2e-25 Identity = 51/81 (62.96%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot
Match: Q0MQG4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFS2 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 5.9e-25 Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = 0
BLAST of Lsi01G010920 vs. ExPASy TrEMBL
Match: A0A5C7GNT9 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_028254 PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 7.6e-76 Identity = 182/322 (56.52%), Postives = 201/322 (62.42%), Query Frame = 0
BLAST of Lsi01G010920 vs. ExPASy TrEMBL
Match: K3YY16 (NAD(P)H dehydrogenase subunit H OS=Setaria italica OX=4555 PE=3 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 3.8e-67 Identity = 144/215 (66.98%), Postives = 154/215 (71.63%), Query Frame = 0
BLAST of Lsi01G010920 vs. ExPASy TrEMBL
Match: A0A5C7GQJ3 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027801 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 3.2e-66 Identity = 129/153 (84.31%), Postives = 129/153 (84.31%), Query Frame = 0
BLAST of Lsi01G010920 vs. ExPASy TrEMBL
Match: A0A3P6HGY3 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC28T60427H PE=3 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 3.0e-64 Identity = 142/217 (65.44%), Postives = 151/217 (69.59%), Query Frame = 0
BLAST of Lsi01G010920 vs. ExPASy TrEMBL
Match: A0A5N5J0K6 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_030100 PE=3 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 5.1e-64 Identity = 118/123 (95.93%), Postives = 120/123 (97.56%), Query Frame = 0
BLAST of Lsi01G010920 vs. NCBI nr
Match: KAF7117280.1 (hypothetical protein RHSIM_RhsimMtG0002200 [Rhododendron simsii]) HSP 1 Score: 307.0 bits (785), Expect = 2.3e-79 Identity = 160/213 (75.12%), Postives = 163/213 (76.53%), Query Frame = 0
BLAST of Lsi01G010920 vs. NCBI nr
Match: TXG46223.1 (hypothetical protein EZV62_028254 [Acer yangbiense]) HSP 1 Score: 294.3 bits (752), Expect = 1.6e-75 Identity = 182/322 (56.52%), Postives = 201/322 (62.42%), Query Frame = 0
BLAST of Lsi01G010920 vs. NCBI nr
Match: GEV11856.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Tanacetum cinerariifolium]) HSP 1 Score: 275.4 bits (703), Expect = 7.5e-70 Identity = 168/288 (58.33%), Postives = 178/288 (61.81%), Query Frame = 0
BLAST of Lsi01G010920 vs. NCBI nr
Match: KAF3452247.1 (hypothetical protein FNV43_RR08345 [Rhamnella rubrinervis]) HSP 1 Score: 258.5 bits (659), Expect = 9.5e-65 Identity = 192/449 (42.76%), Postives = 213/449 (47.44%), Query Frame = 0
BLAST of Lsi01G010920 vs. NCBI nr
Match: VDD65199.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 255.8 bits (652), Expect = 6.2e-64 Identity = 142/217 (65.44%), Postives = 151/217 (69.59%), Query Frame = 0
BLAST of Lsi01G010920 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 ) HSP 1 Score: 161.8 bits (408), Expect = 1.1e-39 Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Lsi01G010920 vs. TAIR 10
Match: ATCG01110.1 (NAD(P)H dehydrogenase subunit H ) HSP 1 Score: 49.7 bits (117), Expect = 6.3e-06 Identity = 20/58 (34.48%), Postives = 35/58 (60.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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