Lsi01G010920 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G010920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	NADH dehydrogenase subunit 7
Location	chr01: 9002883 .. 9005501 (+)
RNA-Seq Expression	Lsi01G010920
Synteny	Lsi01G010920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTGGTCCTACGGACCGTGAACGGATTCGCCTCTGGCCTCTGGGTACGTCGGAACCGCATAAGTTCACCGGGGTGGAGCACGGTCCGCCAAAATCGGCATAGGTTAGGTGCTATTGATGGAACATGGTAAGCCTATCTTTCTCCATATGGAAGTGCTGCGGGCACATAGAGATGTGGGTAGAGGAAGCCTCAAAAAGCGAAGGCCGAGCTGTAGGTCACGTGACCTGCACCGAGTTGGTGGCTGACTGGGCTTTTTCCTAGATCAAAGCGGATCAGCTCGCCTTCTTGTTATCCAAAAGTCGGTCGAATCGGGCGGGCCCCCGCCCCGGAACGTCGAATGAAATAGGTGGCCGGGTTCTCTTTCGACAACCCTTTTGATATGATAGGCCCGGCCACCTTCCCCCTATCCCTTATGTTTAGGAGCGGGATCCGCCCAAGAACGACCAGTCCCGTGGTGGTACGTAAGGCACGGACTCCGCGAACGTCCCGCGCCCCCTTTACTAATAAAGGAAAGAAAGCCTCAACCAGAACCACATTCCTTTTGCGTGCGGATGTAGCTAAGTGTCTGACTCTATTGGTCATAGTTCCCTGCTGTTGCGGCCGGTGCTCGTTTGCGCGCGCGTGAACCAACCCAACAAACAAGGAAAGGATGCCTCTCGGGGCATCTGAGAATGATTCGAGCTGTATGAAGGGAAACTCTCACGTACAGTTTGTTTTTTTTTGGGGGGGGAAGGAGCCCGACAGGGTCCCCCCACTGACTTGGCCCGGGCCTAAGTGAAAGTGAAGTGGTGGGCCTACCCATCCCAACCAGGGGTATGCTGGGATTTGCGAAGAGCAGCACCTTACGATGTTCATGACCAATTGGATCCTGACGTACCAGTAGGTACCAGAGGAGATCGCTATGATCGTTACTGTATCCGTATCGAAGAGATGCGACAAAGTGTTCGGATCATTGTGCAATGTCCTAATCAAATGCCTAGTGGCATGATCAAAGCCGATGATCGTAAGCTATGTCCTCCATCACGATCTCGAATGAAACTATCCATGGAATCGTGTGCCGTGTGAAACGTAGATCATCGCCGTTCTTAACCGAGACTCAGGTTAAGCTCCGTCTCGGAACCTTGTGGGGTTAGGAGTAAAGCATCCCGAGGTTGACGCATCTCGTTGGGCGTGGAGAAACATTGGGAACCAAAATAGCTTTCTTCGGAGCCGTTTCTTGTCCCGTCCCCCCGCCCCGGCATAGCGCTTCGCTTTCGGTGATTCGGAAGAATCAACTTACTTCTCCCTTCTTCATTGATCTGGGGGAAAAGGAACCGTCTACCTGTTGGGAAGCTAGACATTAAGTAAGTGGCTTGATGAGGATAACTAAGCTGACACGCCGGAGTTGGCTGCTGGCACAACTGGGTGGTGCCTTACCGCACCGCAGGTGAACGCGCGGTAGCGTTCGTGGTGGTGCTTCAGGATTCCAATGTACTGCATCCAAGATCAGAACGAGCTTGCCGGCGGACCATTGCCGTCCCATTCTTGAGTGAGCTGGAGCGCAGCCATCTTATCCACTGAACTAGCTAGAAGCTATTGCTTCGGGTCGAAGCACTAAAAGAAAAGGACCAGGAAACGCGGCGGTATAGGAACCACGGGACCCCCCCACTAGTCTAGTAAAGGGAAAACAGAAGTGCGCTCCTGCGCACCAGCTGAAAAAGCCCTTTACCCTTTGAATAATAAGGTCAGCTTCATAGTTCCAACCTAGATAAGGCTTTTTTATGCCCTTTTTTTAGGTTGGGTTGCTGGATACGGGATCCTCGTAGTAGGCTGGACCAACATCCAGCCGAGAGAGGGCAGCCTTTAGAAGCAAGAGGTTGGGAAACCAAGAGAACGCTTCGCGTTTTCTTATCTTTTTCCCGCTCTAGGAGTAGGAGTAGCACAAAAAGAGGGATTTGGATTATTGACCCAATGAGAAACCACTAACATCTTCCTCGTTGGGGCTTCGCGCACTGGGAAAACGCTAACGCGACGGGAAATCGGCCACTAGTAACAAAGCGAACATAAGGTATCGAGAGGGCTATCACAGTAAGGTGCGAATTACCCCCTATTTTGAAAGTACCCCTCTTCCTATTTAGGTAGGGGGTTGAGGCGAGAAATGGCTTGATGAACCGTTCCGTTCGCCACGCACCGGCCCCATTCACTTGCTTATCGTAGAGGCTTTCAGTATACAGTGCCCCACAACTATTCATAGTATAGTGGGGTTGAAACACGAGAGTGCCCGCCCTTTCTTTCAAGTAGGCCACTTTTTCCGGAACGCAGCCCGGGATAAGCGTGACCGTGTATATATATCTATATCTATATATATCTTCGATGCTGTCATTTCGAAATGTCCGCTTCAACCGCTGTTTCAACTACCAAAAAGCTAAGTTGGCTTGACGAGCGCAGATGTGAGGAAGCGGGGGGAGCAATAAAACAACAAATCTCTCGCTTAAGGCTTTCATCGTAAGGGGCAAAGAGAAGCGCTTTTGCTACTGAGAAAGTGAACGGTCAGCGCGAAGGTTCAAGACTTAGCCGAGCATTAGCGAAGCGTCATTCTCATAGTGAGGCGCTTCGAGTTTTCGAAGCGCTGTAG

mRNA sequence

ATGGTGTTGGTCCTACGGACCGTGAACGGATTCGCCTCTGGCCTCTGGGTACGTCGGAACCGCATAAGTTCACCGGGGTGGAGCACGGTCCGCCAAAATCGGCATAGGTTAGGTGCTATTGATGGAACATGTTGGTGGCTGACTGGGCTTTTTCCTAGATCAAAGCGGATCAGCTCGCCTTCTTGTTATCCAAAAGCCCGGCCACCTTCCCCCTATCCCTTATGTTTAGGAGCGGGATCCGCCCAAGAACGACCAGTCCCGTGGTGGTACTTCCCTGCTGTTGCGGCCGGTGCTCGTTTGCGCGCGCGTGAACCAACCCAACAAACAAGGAAAGGATGCCTCTCGGGGCATCTGAGAATGATTCGAGCTTGGTGGGCCTACCCATCCCAACCAGGGGTATGCTGGGATTTGCGAAGAGCAGCACCTTACGATGTTCATGACCAATTGGATCCTGACGTACCAGTAGGTACCAGAGGAGATCGCTATGATCGTTACTGTATCCGTATCGAAGAGATGCGACAAAGTGTTCGGATCATTGTGCAATGTCCTAATCAAATGCCTAGTGGCATGATCAAAGCCGATGATCGTAAGCTATGTCCTCCATCACGATCTCGAATGAAACTATCCATGGAATCGTGTGAACGCGCGGTAGCGTTCGTGGTGGTGCTTCAGGATTCCAATGTACTGCATCCAAGATCAGAACGAGCTTGCCGGCGGACCATTGCCGTCCCATTCTTGAGTCAGCTTCATAGTTCCAACCTAGATAAGGCTTTTTTATGCCCTTTTTTTAGGTTGGGTTGCTGGATACGGGATCCTCGTAGTAGGCTGGACCAACATCCAGCCGAGAGAGGGCAGCCTTTAGAAGCAAGAGAGGCTTTCAGTATACAGTGCCCCACAACTATTCATAGTATAGTGGGGTTGAAACACGAGAGTGCCCGCCCTTTCTTTCAAGTAGGCCACTTTTTCCGGAACGCAGCCCGGGATAAGCGTGACCGTGTATATATATCTATATCTATATATATCTTCGATGCTGTCATTTCGAAATGGGCAAAGAGAAGCGCTTTTGCTACTGAGAAAGTGAACGGTCAGCGCGAAGGTTCAAGACTTAGCCGAGCATTAGCGAAGCGTCATTCTCATAGTGAGGCGCTTCGAGTTTTCGAAGCGCTGTAG

Coding sequence (CDS)

ATGGTGTTGGTCCTACGGACCGTGAACGGATTCGCCTCTGGCCTCTGGGTACGTCGGAACCGCATAAGTTCACCGGGGTGGAGCACGGTCCGCCAAAATCGGCATAGGTTAGGTGCTATTGATGGAACATGTTGGTGGCTGACTGGGCTTTTTCCTAGATCAAAGCGGATCAGCTCGCCTTCTTGTTATCCAAAAGCCCGGCCACCTTCCCCCTATCCCTTATGTTTAGGAGCGGGATCCGCCCAAGAACGACCAGTCCCGTGGTGGTACTTCCCTGCTGTTGCGGCCGGTGCTCGTTTGCGCGCGCGTGAACCAACCCAACAAACAAGGAAAGGATGCCTCTCGGGGCATCTGAGAATGATTCGAGCTTGGTGGGCCTACCCATCCCAACCAGGGGTATGCTGGGATTTGCGAAGAGCAGCACCTTACGATGTTCATGACCAATTGGATCCTGACGTACCAGTAGGTACCAGAGGAGATCGCTATGATCGTTACTGTATCCGTATCGAAGAGATGCGACAAAGTGTTCGGATCATTGTGCAATGTCCTAATCAAATGCCTAGTGGCATGATCAAAGCCGATGATCGTAAGCTATGTCCTCCATCACGATCTCGAATGAAACTATCCATGGAATCGTGTGAACGCGCGGTAGCGTTCGTGGTGGTGCTTCAGGATTCCAATGTACTGCATCCAAGATCAGAACGAGCTTGCCGGCGGACCATTGCCGTCCCATTCTTGAGTCAGCTTCATAGTTCCAACCTAGATAAGGCTTTTTTATGCCCTTTTTTTAGGTTGGGTTGCTGGATACGGGATCCTCGTAGTAGGCTGGACCAACATCCAGCCGAGAGAGGGCAGCCTTTAGAAGCAAGAGAGGCTTTCAGTATACAGTGCCCCACAACTATTCATAGTATAGTGGGGTTGAAACACGAGAGTGCCCGCCCTTTCTTTCAAGTAGGCCACTTTTTCCGGAACGCAGCCCGGGATAAGCGTGACCGTGTATATATATCTATATCTATATATATCTTCGATGCTGTCATTTCGAAATGGGCAAAGAGAAGCGCTTTTGCTACTGAGAAAGTGAACGGTCAGCGCGAAGGTTCAAGACTTAGCCGAGCATTAGCGAAGCGTCATTCTCATAGTGAGGCGCTTCGAGTTTTCGAAGCGCTGTAG

Protein sequence

MVLVLRTVNGFASGLWVRRNRISSPGWSTVRQNRHRLGAIDGTCWWLTGLFPRSKRISSPSCYPKARPPSPYPLCLGAGSAQERPVPWWYFPAVAAGARLRAREPTQQTRKGCLSGHLRMIRAWWAYPSQPGVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPSRSRMKLSMESCERAVAFVVVLQDSNVLHPRSERACRRTIAVPFLSQLHSSNLDKAFLCPFFRLGCWIRDPRSRLDQHPAERGQPLEAREAFSIQCPTTIHSIVGLKHESARPFFQVGHFFRNAARDKRDRVYISISIYIFDAVISKWAKRSAFATEKVNGQREGSRLSRALAKRHSHSEALRVFEAL

Homology

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BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot
Match: Q36450 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.0e-40
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 132 GVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMI 191
           GVCWDLR+AAPYDVHDQLDPD+PVGTRGDRYDRYCIRIEEMRQSVRIIVQC NQMPSGMI
Sbjct: 228 GVCWDLRKAAPYDVHDQLDPDIPVGTRGDRYDRYCIRIEEMRQSVRIIVQCLNQMPSGMI 287

Query: 192 KADDRKLCPPSRSRMKLSMES 213
           KADDRKLCPPSRSRMKLSMES
Sbjct: 288 KADDRKLCPPSRSRMKLSMES 308

[Close]

BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot
Match: P93306 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAD7 PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 3.5e-38
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 131 PGVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGM 190
           PGVCWDLRRAAPYDV+DQLD DVPVGTRGD YDRYCIRIEEMRQS+RIIVQC NQMPSGM
Sbjct: 227 PGVCWDLRRAAPYDVYDQLDFDVPVGTRGDCYDRYCIRIEEMRQSLRIIVQCLNQMPSGM 286

Query: 191 IKADDRKLCPPSRSRMKLSMES 213
           IKADDRKLCPPSR RMKLSMES
Sbjct: 287 IKADDRKLCPPSRCRMKLSMES 308

[Close]

BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot
Match: Q9TC96 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea OX=31312 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.8e-26
Identity = 55/81 (67.90%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 132 GVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMI 191
           GV WDLR+  PYDV++++  DVPVGT+GD YDRY  R+EEMRQS+ II+QC NQ+P GMI
Sbjct: 232 GVAWDLRKTQPYDVYNRMIFDVPVGTQGDCYDRYLCRVEEMRQSIHIIMQCLNQLPKGMI 291

Query: 192 KADDRKLCPPSRSRMKLSMES 213
           KADD+K+ PPSRS+MK SMES
Sbjct: 292 KADDKKITPPSRSQMKQSMES 312

[Close]

BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot
Match: O21270 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-25
Identity = 51/81 (62.96%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 132 GVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMI 191
           G+ WDLR+  PYDV+D+L+ D+PVGT+GD YDRY IR+EEMRQS+++I+QC N+MP+G+I
Sbjct: 230 GIAWDLRKTQPYDVYDELEFDIPVGTKGDCYDRYLIRVEEMRQSLKLIMQCLNKMPTGVI 289

Query: 192 KADDRKLCPPSRSRMKLSMES 213
           K DD+K+ PPSR  MK SME+
Sbjct: 290 KVDDKKISPPSRVDMKDSMEA 310

[Close]

BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot
Match: Q0MQG4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFS2 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.9e-25
Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = 0


Query: 132 GVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMI 191
           G+ WDLR+  PYDV+DQ++ DVPVG+RGD YDRY  R+EEMRQS+RII QC N+MP G I
Sbjct: 297 GIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEEMRQSLRIIAQCLNKMPPGEI 356

Query: 192 KADDRKLCPPSRSRMKLSMES 213
           K DD K+ PP R+ MK SMES
Sbjct: 357 KVDDAKVSPPKRAEMKTSMES 377

[Close]

BLAST of Lsi01G010920 vs. ExPASy TrEMBL
Match: A0A5C7GNT9 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_028254 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 7.6e-76
Identity = 182/322 (56.52%), Postives = 201/322 (62.42%), Query Frame = 0


Query: 76  LGAGSAQERPVPWWY--FPAVAAGARLRAREPTQQTRKGCLSGHLRMIRAWWAYPSQPGV 135
           +G  +AQ+    W +  FPAVAAGARLRAREPTQQTRKGCLS HLRMIRAWWAYPSQPGV
Sbjct: 84  IGTVTAQQAK-DWGFSGFPAVAAGARLRAREPTQQTRKGCLSRHLRMIRAWWAYPSQPGV 143

Query: 136 CWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKA 195
           CWD RRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKA
Sbjct: 144 CWDSRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKA 203

Query: 196 DDRKLCPPSRSRMKLSMESCERAVAFVVVLQDSNVLHPRSERACRRTIAVPFLSQLHSSN 255
           DDRKLCPPSR RMKLSMES  R     +V +   +  P S       ++ P     HS++
Sbjct: 204 DDRKLCPPSRCRMKLSMESIPRLAH--LVGRGEALGTPISFFG---AVSFPVPPPRHSAS 263

Query: 256 L----DKAFLCPFFRLGCWIRDPRSRLDQHPAERGQPLEAREAFSIQCPTTIHSIVGLKH 315
           L          PFF            +D    E     EAR           H + GL  
Sbjct: 264 LPVLRKNQLTSPFF------------IDLGEKEPSTCWEAR-----------HQVSGLMR 323

Query: 316 --ESARPFFQVGHFFRNAARDKRDRVYISISIYIFDAVISKWAKRSAFATEKVNGQREGS 375
             +  R  + +          +R R  +      F     +WAKRSAFATEK NG REGS
Sbjct: 324 ITKLTRRSWLLAQLGGALPHRRRTRGSVRGGASGF-----QWAKRSAFATEKANGLREGS 371

Query: 376 RLSRALAKRHSHSEALRVFEAL 390
           RLSRALAK  SHSEALRV EAL
Sbjct: 384 RLSRALAKLDSHSEALRVSEAL 371

[Close]

BLAST of Lsi01G010920 vs. ExPASy TrEMBL
Match: K3YY16 (NAD(P)H dehydrogenase subunit H OS=Setaria italica OX=4555 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 3.8e-67
Identity = 144/215 (66.98%), Postives = 154/215 (71.63%), Query Frame = 0


Query: 107 QQTRKGCLSGHLRMIRAWWAYPSQPGVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYC 166
           QQ +    SG +  ++ WWAYPSQPGVCWD RRAAPYDVHDQ D DVPVGTRGDRYDRYC
Sbjct: 199 QQAKDWGFSGVMLRVK-WWAYPSQPGVCWDSRRAAPYDVHDQSDLDVPVGTRGDRYDRYC 258

Query: 167 IRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPSRSRMKLSMESC-------ERAVAF 226
           IRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPSRSRMKLSMES         RAVAF
Sbjct: 259 IRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPSRSRMKLSMESVVPYRTAGARAVAF 318

Query: 227 VVVLQDSNVLHPRSERACRRTIAVPFLSQLHSSNL------------------------D 286
           VVVLQDSNVL PRSERACRRT A+PF S+L  S+L                         
Sbjct: 319 VVVLQDSNVLRPRSERACRRTTAIPFFSELERSHLIHGKRVKLSLRVEALKEKDRETRRH 378

Query: 287 KAFLCPFFRLGCW-IRDPRSRLDQHPAERGQPLEA 290
           +    P  R   + IRDPRSRLDQ+PAERGQPLEA
Sbjct: 379 RNHGNPGGRKTMYGIRDPRSRLDQNPAERGQPLEA 412

[Close]

BLAST of Lsi01G010920 vs. ExPASy TrEMBL
Match: A0A5C7GQJ3 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027801 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 3.2e-66
Identity = 129/153 (84.31%), Postives = 129/153 (84.31%), Query Frame = 0


Query: 62  CYPKAR-PPSPYPLCLGAGSAQERPVPWWYFPAVAAGARLRAREPTQQTRKGCLSGHLRM 121
           CYPK R PP     C G             FPAVAAGARLRAREPTQQTRKGCLS HLRM
Sbjct: 159 CYPKGRDPPKNDQSCGGTEGTDSA-----NFPAVAAGARLRAREPTQQTRKGCLSRHLRM 218

Query: 122 IRAWWAYPSQPGVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIV 181
           IRAWWAYPSQPGVCWD RRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIV
Sbjct: 219 IRAWWAYPSQPGVCWDSRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIV 278

Query: 182 QCPNQMPSGMIKADDRKLCPPSRSRMKLSMESC 214
           QCPNQMPSGMIKADDRKLCPPSR RMKLSMESC
Sbjct: 279 QCPNQMPSGMIKADDRKLCPPSRCRMKLSMESC 306

[Close]

BLAST of Lsi01G010920 vs. ExPASy TrEMBL
Match: A0A3P6HGY3 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC28T60427H PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.0e-64
Identity = 142/217 (65.44%), Postives = 151/217 (69.59%), Query Frame = 0


Query: 85  PVPWWYFPAVAAGARLRAREPTQQTRKGCLSGHLRMIRAWWAYPSQPGVCWDLRRAAPYD 144
           P P   FPAVAAGARLRAREPTQQ RKGC   HLRMIRAWWAYPSQPGVCWD RRAAPYD
Sbjct: 316 PRPGKKFPAVAAGARLRAREPTQQRRKGCPGRHLRMIRAWWAYPSQPGVCWDSRRAAPYD 375

Query: 145 VHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRK------- 204
           VHDQ DPDVPVGTRGDRYDRYCIRIEEMRQS+RIIVQC NQMPSGMIKADD+K       
Sbjct: 376 VHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSLRIIVQCLNQMPSGMIKADDQKHWEPQFL 435

Query: 205 --------------------------LCPPS-----RSRM---KLSME------SCERAV 255
                                     L P S     R+R+   KL ++      + ERAV
Sbjct: 436 SSEPFLFPSPHPGIALRFRFFGRINLLLPSSLIWGKRNRLPVGKLDIKVVPYRAAGERAV 495

[Close]

BLAST of Lsi01G010920 vs. ExPASy TrEMBL
Match: A0A5N5J0K6 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_030100 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.1e-64
Identity = 118/123 (95.93%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 91  FPAVAAGARLRAREPTQQTRKGCLSGHLRMIRAWWAYPSQPGVCWDLRRAAPYDVHDQLD 150
           FPAVAAG RLRAREPTQQTR GCLSGHLRMIRAWWAYPSQPGVCWDLR+AAPYDVHDQLD
Sbjct: 670 FPAVAAGTRLRAREPTQQTRIGCLSGHLRMIRAWWAYPSQPGVCWDLRKAAPYDVHDQLD 729

Query: 151 PDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPSRSRMKLSM 210
           PDVPVGTRGDRYDRYCIRIEEMRQS+RIIVQCPNQMPSGMIKADDRKLCPPSR RMKLSM
Sbjct: 730 PDVPVGTRGDRYDRYCIRIEEMRQSLRIIVQCPNQMPSGMIKADDRKLCPPSRCRMKLSM 789

Query: 211 ESC 214
           ESC
Sbjct: 790 ESC 792

[Close]

BLAST of Lsi01G010920 vs. NCBI nr
Match: KAF7117280.1 (hypothetical protein RHSIM_RhsimMtG0002200 [Rhododendron simsii])

HSP 1 Score: 307.0 bits (785), Expect = 2.3e-79
Identity = 160/213 (75.12%), Postives = 163/213 (76.53%), Query Frame = 0


Query: 1   MVLVLRTVNGFASGLWVRRNRISSPGWSTVRQNRHRLGAIDGTCWWLTGLFPRSKRISSP 60
           MVLVLRTVN  ASGLW RRNR+SSPGWSTVRQNRHRLGAIDGT  W              
Sbjct: 1   MVLVLRTVNRLASGLWARRNRMSSPGWSTVRQNRHRLGAIDGT--W-------------- 60

Query: 61  SCYPKARPPSPYPLCLGAGSAQERPVPWWYFPAVAAGARLRAREPTQQTRKGCLSGHLRM 120
                   P P  L   +G  + R      FPAV AGARL AREPTQQTRKGCLSGHLRM
Sbjct: 61  --------PGPLSLMFRSG-IRPRTTILVVFPAVVAGARLCAREPTQQTRKGCLSGHLRM 120

Query: 121 IRAWWAYPSQPGVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIV 180
           IRAWWA  SQPGVCWD RRAAPYDVHDQ DPDVPVGTRGDRYDRYCIRIEEMRQSVRIIV
Sbjct: 121 IRAWWASLSQPGVCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIV 180

Query: 181 QCPNQMPSGMIKADDRKLCPPSRSRMKLSMESC 214
           QC NQMPSGMIKADDRKLCPPSR RMKLSMESC
Sbjct: 181 QCLNQMPSGMIKADDRKLCPPSRCRMKLSMESC 188

[Close]

BLAST of Lsi01G010920 vs. NCBI nr
Match: TXG46223.1 (hypothetical protein EZV62_028254 [Acer yangbiense])

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-75
Identity = 182/322 (56.52%), Postives = 201/322 (62.42%), Query Frame = 0


Query: 76  LGAGSAQERPVPWWY--FPAVAAGARLRAREPTQQTRKGCLSGHLRMIRAWWAYPSQPGV 135
           +G  +AQ+    W +  FPAVAAGARLRAREPTQQTRKGCLS HLRMIRAWWAYPSQPGV
Sbjct: 84  IGTVTAQQAK-DWGFSGFPAVAAGARLRAREPTQQTRKGCLSRHLRMIRAWWAYPSQPGV 143

Query: 136 CWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKA 195
           CWD RRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKA
Sbjct: 144 CWDSRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKA 203

Query: 196 DDRKLCPPSRSRMKLSMESCERAVAFVVVLQDSNVLHPRSERACRRTIAVPFLSQLHSSN 255
           DDRKLCPPSR RMKLSMES  R     +V +   +  P S       ++ P     HS++
Sbjct: 204 DDRKLCPPSRCRMKLSMESIPRLAH--LVGRGEALGTPISFFG---AVSFPVPPPRHSAS 263

Query: 256 L----DKAFLCPFFRLGCWIRDPRSRLDQHPAERGQPLEAREAFSIQCPTTIHSIVGLKH 315
           L          PFF            +D    E     EAR           H + GL  
Sbjct: 264 LPVLRKNQLTSPFF------------IDLGEKEPSTCWEAR-----------HQVSGLMR 323

Query: 316 --ESARPFFQVGHFFRNAARDKRDRVYISISIYIFDAVISKWAKRSAFATEKVNGQREGS 375
             +  R  + +          +R R  +      F     +WAKRSAFATEK NG REGS
Sbjct: 324 ITKLTRRSWLLAQLGGALPHRRRTRGSVRGGASGF-----QWAKRSAFATEKANGLREGS 371

Query: 376 RLSRALAKRHSHSEALRVFEAL 390
           RLSRALAK  SHSEALRV EAL
Sbjct: 384 RLSRALAKLDSHSEALRVSEAL 371

[Close]

BLAST of Lsi01G010920 vs. NCBI nr
Match: GEV11856.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Tanacetum cinerariifolium])

HSP 1 Score: 275.4 bits (703), Expect = 7.5e-70
Identity = 168/288 (58.33%), Postives = 178/288 (61.81%), Query Frame = 0


Query: 132 GVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMI 191
           GVCWD RRAAPYDVHDQLDPD+PV TRGDRYDRYCIRIEEMRQSVRIIVQCPN+MPSGMI
Sbjct: 404 GVCWDSRRAAPYDVHDQLDPDIPVATRGDRYDRYCIRIEEMRQSVRIIVQCPNEMPSGMI 463

Query: 192 KADDRKLCPPSRSRMKLSMESCE----------RAVAFVVVLQDSNVLHPRSERACRRTI 251
           KADDRKLCP S+SRMKLSMESC           R VAFVVVLQDSNVL PRS+RAC RT 
Sbjct: 464 KADDRKLCPLSQSRMKLSMESCAVVVPYRTAGGRTVAFVVVLQDSNVLRPRSKRACWRTT 523

Query: 252 AVPFLSQLHSSNLDKAFLCPFFRLGCWIRDPRSRLDQHPAERGQPLEA------------ 311
           AVPFLS                  G WIRDPRSRLDQHP ERGQ LE             
Sbjct: 524 AVPFLS-----------------WGYWIRDPRSRLDQHPTERGQSLEGTGWETKRMLGLF 583

Query: 312 -REAFSIQCPTTIHSIVGLKHESARP----FFQVGHFF---RNAARDKRDRVYISISIYI 371
              +      +T   I  L H+   P       VG  F   R   R +      S+S   
Sbjct: 584 LSSSHPRSRSSTKRGISILFHKPLTPSSLGLRAVGKGFSDGRPLTRKQEQENQESLS--- 643

Query: 372 FDAVISKWAKRSAFATEKVNGQREGSRLSRALAKRHSHSEALRVFEAL 390
                +   KRSAFATEK NGQREG RLSR LA   SHSEALRV EAL
Sbjct: 644 --CPSTYGEKRSAFATEKTNGQREGLRLSRTLANLDSHSEALRVNEAL 669

[Close]

BLAST of Lsi01G010920 vs. NCBI nr
Match: KAF3452247.1 (hypothetical protein FNV43_RR08345 [Rhamnella rubrinervis])

HSP 1 Score: 258.5 bits (659), Expect = 9.5e-65
Identity = 192/449 (42.76%), Postives = 213/449 (47.44%), Query Frame = 0


Query: 22  ISSPGWSTVRQNRHRLGAIDGTCWWLTGLFPRSKRISSPSCYPKARPPSPYPLCLGAGSA 81
           +SSPGWSTVRQNRHRLGAIDGT  W +G+ PR+   +SP    KAR P            
Sbjct: 1   MSSPGWSTVRQNRHRLGAIDGT--W-SGIRPRT---TSPVVVRKARTPR----------- 60

Query: 82  QERPVPWWYFPAVAAGARLRAREPTQQTRKGCLSGHLRMIRAWWAYPSQPGVCWDLRRAA 141
                               +R P     K   +    ++R          VCWD RRAA
Sbjct: 61  -------------------TSRAPFTNKGKKASTRTTFLLR----------VCWDSRRAA 120

Query: 142 PYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPP 201
           PYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPP
Sbjct: 121 PYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPP 180

Query: 202 SRSRMKLSMES------------------------------------------------- 261
           SR RMKLSMES                                                 
Sbjct: 181 SRCRMKLSMESKASRGWRISLGVEKHWEPKFLSSEPFLFPSPRPGIALRFRFFGRINLLT 240

Query: 262 -----------------CERAV------------AFVVVLQDSNVLHPRSERACRRTIAV 321
                                V            ++++  Q   + H R  R   R  A 
Sbjct: 241 SPFFIDLGEKEPSTSWEARHQVSGLMRITKLTRRSWLLAQQGGALPHRRRTRGSVRGGAS 300

Query: 322 PF---LSQLHSSNLDKAFLCPFFRLGCWIRDPRSRLDQHPAERGQPLEAREAFSIQCPTT 381
            F    S++ +S L      P   LGCWIRDPRSRLDQHPAERGQPLEA           
Sbjct: 301 GFQCTASKIRTS-LPADHCRPILELGCWIRDPRSRLDQHPAERGQPLEA----------- 360

Query: 382 IHSIVGLKHESARPFFQVGHFFRNAARDKRDRVYISISIYIFDAVISKWAKRSAFATEKV 390
                    E+ R                  RV++S S        S+ AKR AFATEK 
Sbjct: 361 ------TGWETKRTL----------------RVFLSAS-----RPRSRRAKRRAFATEKA 364

[Close]

BLAST of Lsi01G010920 vs. NCBI nr
Match: VDD65199.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 255.8 bits (652), Expect = 6.2e-64
Identity = 142/217 (65.44%), Postives = 151/217 (69.59%), Query Frame = 0


Query: 85  PVPWWYFPAVAAGARLRAREPTQQTRKGCLSGHLRMIRAWWAYPSQPGVCWDLRRAAPYD 144
           P P   FPAVAAGARLRAREPTQQ RKGC   HLRMIRAWWAYPSQPGVCWD RRAAPYD
Sbjct: 316 PRPGKKFPAVAAGARLRAREPTQQRRKGCPGRHLRMIRAWWAYPSQPGVCWDSRRAAPYD 375

Query: 145 VHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRK------- 204
           VHDQ DPDVPVGTRGDRYDRYCIRIEEMRQS+RIIVQC NQMPSGMIKADD+K       
Sbjct: 376 VHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSLRIIVQCLNQMPSGMIKADDQKHWEPQFL 435

Query: 205 --------------------------LCPPS-----RSRM---KLSME------SCERAV 255
                                     L P S     R+R+   KL ++      + ERAV
Sbjct: 436 SSEPFLFPSPHPGIALRFRFFGRINLLLPSSLIWGKRNRLPVGKLDIKVVPYRAAGERAV 495

[Close]

BLAST of Lsi01G010920 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 )

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-39
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 131 PGVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGM 190
           PGVCWD RRAAPYDVHDQ D DVPVGTRGDRYDRYCIRIEEMRQS+RIIVQC NQMPSGM
Sbjct: 227 PGVCWDSRRAAPYDVHDQSDLDVPVGTRGDRYDRYCIRIEEMRQSLRIIVQCLNQMPSGM 286

Query: 191 IKADDRKLCPPSRSRMKLSMES 213
           IKADDRKLCPPSR RMKLSMES
Sbjct: 287 IKADDRKLCPPSRCRMKLSMES 308

[Close]

BLAST of Lsi01G010920 vs. TAIR 10
Match: ATCG01110.1 (NAD(P)H dehydrogenase subunit H )

HSP 1 Score: 49.7 bits (117), Expect = 6.3e-06
Identity = 20/58 (34.48%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 132 GVCWDLRRAAPYDVHDQLDPDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQCPNQMPSG 190
           G+ WDLR+   Y+ +D+ + ++    +GD   RY +R+ EM +S++II Q    +P G
Sbjct: 228 GIPWDLRKIDRYESYDEFEWEIQWQKQGDSLARYLVRLSEMTESIKIIQQALEGLPGG 285

The following BLAST results are available for this feature:

BLAST of Lsi01G010920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q36450	1.0e-40	96.30	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX...	[more]
P93306	3.5e-38	92.68	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX...	[more]
Q9TC96	1.8e-26	67.90	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea O...	[more]
O21270	1.2e-25	62.96	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483...	[more]
Q0MQG4	5.9e-25	65.43	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Gorilla ...	[more]

BLAST of Lsi01G010920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7GNT9	7.6e-76	56.52	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_028254 PE=3 SV=1	[more]
K3YY16	3.8e-67	66.98	NAD(P)H dehydrogenase subunit H OS=Setaria italica OX=4555 PE=3 SV=1	[more]
A0A5C7GQJ3	3.2e-66	84.31	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027801 PE=3 SV=1	[more]
A0A3P6HGY3	3.0e-64	65.44	Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC28T60427H PE=3 SV=1	[more]
A0A5N5J0K6	5.1e-64	95.93	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_030100 PE=3 SV=1	[more]

BLAST of Lsi01G010920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF7117280.1	2.3e-79	75.12	hypothetical protein RHSIM_RhsimMtG0002200 [Rhododendron simsii]	[more]
TXG46223.1	1.6e-75	56.52	hypothetical protein EZV62_028254 [Acer yangbiense]	[more]
GEV11856.1	7.5e-70	58.33	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Tanacetum cinerariifolium...	[more]
KAF3452247.1	9.5e-65	42.76	hypothetical protein FNV43_RR08345 [Rhamnella rubrinervis]	[more]
VDD65199.1	6.2e-64	65.44	unnamed protein product [Brassica oleracea]	[more]

BLAST of Lsi01G010920 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00510.1	1.1e-39	92.68	NADH dehydrogenase subunit 7	[more]
ATCG01110.1	6.3e-06	34.48	NAD(P)H dehydrogenase subunit H	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001135	NADH-quinone oxidoreductase, subunit D	PFAM	PF00346	Complex1_49kDa	coord: 132..218 e-value: 2.8E-27 score: 95.5
IPR029014	[NiFe]-hydrogenase, large subunit	GENE3D	1.10.645.10		coord: 104..232 e-value: 2.2E-31 score: 111.0
IPR029014	[NiFe]-hydrogenase, large subunit	SUPERFAMILY	56762	HydB/Nqo4-like	coord: 132..217
IPR022885	NAD(P)H-quinone oxidoreductase subunit D/H	PANTHER	PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	coord: 132..224
None	No IPR available	PANTHER	PTHR11993:SF41	NADH DEHYDROGENASE SUBUNIT 7	coord: 132..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010920.1	Lsi01G010920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H
molecular_function	GO:0048038	quinone binding