Lsi01G004780 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGTAAAGGTAGACAAAATTAATGTCCTTTCAAAAATGTCAGCTAAATGAGGTGGCAAAATTACTAAAGATTCTTTGGACTCCTCATGCTTCCCCTCCTCTTTTCCCCAACCTCATTATATTTTATTTCAATCCATCATTTTTCATACACCTATATAAACCCTCCCCTGCTGCTTCTTATAATCAACTTGTGCTCGCTCACATTTTAGTTTTCCTCACAACTCATCTGAGTTTATCTTTTTAACTCTTTTCTTCACTTTCTTTGCTTTCTCTTCCCTTTCCCAAATGGCCACCATTGAGGTAATTCAAGTTTATATAGCTTTTGCTCATGGCTTTGGGTTAAGTTTTTTAGTATTTGGTTCAGTTCAGATCAAACCTCTTTCAAATCTTCTTCTTTTTTTGTTTTTCTGTTGACATTCTTACTCTTTATTTCTCTCTATGTAAGTGTGATCAAGTTCCAATTGATCTTGCAATGTGGGATTTTTCTCATCAATGCATTGAAATGATCTATATATTGGATCGTATATATTCTACTAGCAAAAGAAAGAACAAACTAATGGCCTTTTCTCATATGAAAATGATCATATAAAACTGTTTAAAACAATGTTTTCCTTAAATCATTGCTAAAAAGCAAGTTCCAATTTGATAATCAATTGTGTGATCTGGGTTTTGCAGGTTGAATCAGCCCCCGTAGTATTGCCAGAGCCTGAGGCAGCTCCAGTGGTTCAACTTGAGGAGAAAGTTGTAGAAGAGCCAGTAGCTGAAGCCCCTGCTGAGGAGCCAAAGGAGGAAGCTGCCCCTGAACCTGTGGAGGCAGAGGAACCAGCACCGGTCGCAACCGAACCGGTCGTCGAAACCAAGGAAGAAGTTGTGGTAAAGGAAGAGGCCAAGCCAGAGGAGGCAGAGCCTGCAGCTGCTGCTTCCGAGCCCGAAGCACCAGTCGAGGTCGAAGAGAAGAAGGAGGAAGAGGCTAAAGAGGAAACAGTAGAGCCTGTGGTGGAGAAAACAGAAGAACCTCAGGAAGCGAAAAGTGAAGATGCTGTTGAAGAGAGCTCAGAAGCTGCAGCACCAGCTGAGGAAGAGAAGCCCAAAGCAGAGGAATAA AAGTAAAGGTAGACAAAATTAATGTCCTTTCAAAAATGTCAGCTAAATGAGGTGGCAAAATTACTAAAGATTCTTTGGACTCCTCATGCTTCCCCTCCTCTTTTCCCCAACCTCATTATATTTTATTTCAATCCATCATTTTTCATACACCTATATAAACCCTCCCCTGCTGCTTCTTATAATCAACTTGTGCTCGCTCACATTTTAGTTTTCCTCACAACTCATCTGAGTTTATCTTTTTAACTCTTTTCTTCACTTTCTTTGCTTTCTCTTCCCTTTCCCAAATGGCCACCATTGAGGTTGAATCAGCCCCCGTAGTATTGCCAGAGCCTGAGGCAGCTCCAGTGGTTCAACTTGAGGAGAAAGTTGTAGAAGAGCCAGTAGCTGAAGCCCCTGCTGAGGAGCCAAAGGAGGAAGCTGCCCCTGAACCTGTGGAGGCAGAGGAACCAGCACCGGTCGCAACCGAACCGGTCGTCGAAACCAAGGAAGAAGTTGTGGTAAAGGAAGAGGCCAAGCCAGAGGAGGCAGAGCCTGCAGCTGCTGCTTCCGAGCCCGAAGCACCAGTCGAGGTCGAAGAGAAGAAGGAGGAAGAGGCTAAAGAGGAAACAGTAGAGCCTGTGGTGGAGAAAACAGAAGAACCTCAGGAAGCGAAAAGTGAAGATGCTGTTGAAGAGAGCTCAGAAGCTGCAGCACCAGCTGAGGAAGAGAAGCCCAAAGCAGAGGAATAA ATGGCCACCATTGAGGTTGAATCAGCCCCCGTAGTATTGCCAGAGCCTGAGGCAGCTCCAGTGGTTCAACTTGAGGAGAAAGTTGTAGAAGAGCCAGTAGCTGAAGCCCCTGCTGAGGAGCCAAAGGAGGAAGCTGCCCCTGAACCTGTGGAGGCAGAGGAACCAGCACCGGTCGCAACCGAACCGGTCGTCGAAACCAAGGAAGAAGTTGTGGTAAAGGAAGAGGCCAAGCCAGAGGAGGCAGAGCCTGCAGCTGCTGCTTCCGAGCCCGAAGCACCAGTCGAGGTCGAAGAGAAGAAGGAGGAAGAGGCTAAAGAGGAAACAGTAGAGCCTGTGGTGGAGAAAACAGAAGAACCTCAGGAAGCGAAAAGTGAAGATGCTGTTGAAGAGAGCTCAGAAGCTGCAGCACCAGCTGAGGAAGAGAAGCCCAAAGCAGAGGAATAA MATIEVESAPVVLPEPEAAPVVQLEEKVVEEPVAEAPAEEPKEEAAPEPVEAEEPAPVATEPVVETKEEVVVKEEAKPEEAEPAAAASEPEAPVEVEEKKEEEAKEETVEPVVEKTEEPQEAKSEDAVEESSEAAAPAEEEKPKAEE Homology
BLAST of Lsi01G004780 vs. ExPASy TrEMBL
Match: A0A5D3CMF4 (Fibrous sheath CABYR-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005990 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.6e-34 Identity = 120/151 (79.47%), Postives = 128/151 (84.77%), Query Frame = 0
BLAST of Lsi01G004780 vs. ExPASy TrEMBL
Match: A0A1S3B0W0 (fibrous sheath CABYR-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103484659 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 8.7e-33 Identity = 117/150 (78.00%), Postives = 125/150 (83.33%), Query Frame = 0
BLAST of Lsi01G004780 vs. ExPASy TrEMBL
Match: A0A0A0KMX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511710 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 4.3e-32 Identity = 119/154 (77.27%), Postives = 126/154 (81.82%), Query Frame = 0
BLAST of Lsi01G004780 vs. ExPASy TrEMBL
Match: A0A6J1IVT4 (major latex allergen Hev b 5-like OS=Cucurbita maxima OX=3661 GN=LOC111478851 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.4e-30 Identity = 121/156 (77.56%), Postives = 126/156 (80.77%), Query Frame = 0
BLAST of Lsi01G004780 vs. ExPASy TrEMBL
Match: A0A6J1GG70 (major latex allergen Hev b 5-like OS=Cucurbita moschata OX=3662 GN=LOC111453630 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 4.6e-26 Identity = 118/160 (73.75%), Postives = 121/160 (75.62%), Query Frame = 0
BLAST of Lsi01G004780 vs. NCBI nr
Match: XP_038880819.1 (probable serine/threonine-protein kinase kinX [Benincasa hispida]) HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39 Identity = 130/150 (86.67%), Postives = 132/150 (88.00%), Query Frame = 0
BLAST of Lsi01G004780 vs. NCBI nr
Match: TYK13001.1 (fibrous sheath CABYR-binding protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 155.6 bits (392), Expect = 3.3e-34 Identity = 120/151 (79.47%), Postives = 128/151 (84.77%), Query Frame = 0
BLAST of Lsi01G004780 vs. NCBI nr
Match: XP_008440071.1 (PREDICTED: fibrous sheath CABYR-binding protein-like [Cucumis melo]) HSP 1 Score: 149.8 bits (377), Expect = 1.8e-32 Identity = 117/150 (78.00%), Postives = 125/150 (83.33%), Query Frame = 0
BLAST of Lsi01G004780 vs. NCBI nr
Match: XP_004134796.1 (fibrous sheath CABYR-binding protein [Cucumis sativus] >KGN49056.1 hypothetical protein Csa_004121 [Cucumis sativus]) HSP 1 Score: 147.5 bits (371), Expect = 9.0e-32 Identity = 119/154 (77.27%), Postives = 126/154 (81.82%), Query Frame = 0
BLAST of Lsi01G004780 vs. NCBI nr
Match: XP_023544677.1 (uncharacterized protein LOC111804190 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023544678.1 uncharacterized protein LOC111804190 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 142.5 bits (358), Expect = 2.9e-30 Identity = 122/160 (76.25%), Postives = 126/160 (78.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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