Lsi01G003300 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G003300
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Clathrin light chain
Location	chr01: 2892019 .. 2894717 (-)
RNA-Seq Expression	Lsi01G003300
Synteny	Lsi01G003300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACTCATCCCTTTGTTTTTCATTTACAAAACCCAACCCATCAACACATTTCTCTCTGCGGTGTTGGAGAGCGCTAAAATGTCCACCTTCGACGCCTACAGTATGGACGGCGAAGACGCCTATGGCAGTTACGGATCCTACTCCAATTTCTCCGGCGCCTTCCCTGGGGACGCCGATGTAAGTGTCGAGCATACTCCTGCCTCGCCGGACGTCTTCGGATTCGACGATCCGAGCCCTAACTACTCTCAGGCTCCCTTTGATCCGATTCATGTGGAGAATGGAAATGGAAACGGCTATGGCGCGGTTGAGGATGAAGTCGGCGATGGTGTTTTCGTGTCCGATGGTCCAATTCTTCCGCCTCCGGGCGAGATGGGCGTGGAGGAAGGATATGCTCTTCGTGAATGGCGTCGGTAAGATCTTTAGATCCTCAATTTTTTTAGATTTCTTGGAGCTGAAGAGGTTTTTCTTCTGCTGCTGGTTCTTTGTACCTCGGTGTTGATTTAGATCTGATTCTTTGGTGAAACAACTTCAGATCTCTACTATTCATCTCCTTCTAGTGTTTTTACTTGGTAGCACTGATTGATCCGGACTATTTCTCCACTCTGTCTACCTAGTTCCACATAGAGGGATTTGATGCGGGAAATTATATTGATCGATCTGCATTAAGAGGTGGTGAATTAAAGAACTTAGATCTAGGGGCATCTGTACCTCAATTAGTAGAGTTAGATGAAGAAGCTCTCGCGTTAGGGAGCTGTGATCGAGGTTTATATTAGTAGATCAGTTAGGGACTAGCCATTAAGTCAAATGTCTATTTATTAGTGGGTCTATGTCGTTATTGATCTATGTGGAAGTTCAAGCGGAATTTAGGTTAATTTCTGGAAGTTCAAGCTGAATTCCAGCGGATTATTCGTGGATCAGTCAGGGACATAGCCATTGAAGTCAAATTACTAATTATCAGTGAGTGTATATTGTTGTTGATCTATGTGGAGGTTTAAGAGGAATTCCAGCGGAATATTGGTATATCAATCGGGGAGATAGCCATTTAGTCAAATTACTATTATTAGTGGGTCTATATTGTTGTCGATCTATGTGGAACCGTGGAAGTTCAAGCGGAGTTCAGGGGTAAATCTCTGGTAAGATAAGTATGGATGATTCGATTTAGCCATGACCCATATTATGAAATTTCTGTGGAGTAGTTTGCCTGTTTAGGATTGAACCATAACAAAAACGCATGAGTGATTCCTAAATAGAAATTGCATGATGTAGATCTTCAATTGAAATCTTTTGAACTCTCTTTTTATTTCTCTCTTTTGTTTAGTTGCTTAATTGGATGTAACAAAATATCCTTATTTCTTGACCTTCTTCTTCCCTTTAGATCGCAGAAATTGAATTTTGTATTTGATGGCCAATTTGAGTTTTGAATATGTATTTCAAGTACATATCTGTTGTCTTACAAATTTGAACTTTAGAAATTACGGGTTTCCTGGTGCAGCCAAAATGCCATTCAGCTTGAAGAGAAGGAGAAAAAGGAGAAAGAATTGAGAATCAAAATTATTGAAGAAGCCGAGGAATATAAAATAGGTTTCTATGAGAAAAGAAAGCTTAATGTTGAGAGTAACAAGGTTAACAACAGAGAAAGAGAGAAGGTATAGTTTTGTTTGCCATCTTTTTTCCGAGCAAGTGTTCTTTTTCTTCTCTACCACTGTTTTCTTAGTATAGAATTTCGTGTTCTTGGAGCAGTTATACTTGGCAAATCAGGAGAAGTTTCATAAAGAGGCCGATAAACAATACTGGAAAGCTATTGCAGAACTAGTTCCTAATGAAGTTCCTAATATTGAGAAAAAGAGAGGAAAGAAGGATCAAGAAAAGAAACCATCTATAATAGTTGTTCAGGGTCCAAAGCCTGGGAAACCTACCGATCTTTCAAGAATGCGACAAATTCTCGTGAAATTGAAGCACACACCCCCACCTCATATGAAACCACCCCCACCCCCACCTGCCAAGGATGCCAAAGATGCTAAAAATGGAAAGGAAACTAAGGATGCAAAGGATGGAAAGGATGGCAAAAATGAAAAAGATGCAGCAACAAAAGCATCTGATCCTGCACCTGGAGCTGCCACTGCCAATGGCACTTCTCACAAACCTCAAGAAGCAACTGCTGCTGCCGCTGCTCCTGCCGAAGTGGAGCAAACTGCCACATAATGACATAGCCATAGCCCTTATCAACTTCTTTCTGCTCAATACTTTTACATTTTCCCTTTGAGGTTTCGTTGTTTTTCGTTCGTTTATCCTTGCATTTGAATGTGTAATCAGTTGTGATCTTATACAACATTTATTCTTCTGTACCTTATGACGGTCTCTAGTGGCATATTATCTTTTGGACTAGTCGAGGTTCTGATTTTGACATTGCCACATCTTCTTTGAAATTATTTCTTCAGGTTAGCCTATTCATATTCTTCTCAGCCCATCTTCCTCCACTCTAGATGTTTGCTTCTGTAATCATGGGGTTATTTCGAGAACACTAGAATTGCCTTCAGATTCTTCTTGTGATTGATGTGAATTCTATTTGTGCTGTAGTTAATTTCTTATTCTTAAGGCTGAGTTCAGAATTAATTTTGAGTGGCTCATTTTGTTATATGTTTTATTTTATTTTTTTACAAAGTTTCTGAATGCAAAATCTTTATTGAATTTCAGACTA

mRNA sequence

AGAACTCATCCCTTTGTTTTTCATTTACAAAACCCAACCCATCAACACATTTCTCTCTGCGGTGTTGGAGAGCGCTAAAATGTCCACCTTCGACGCCTACAGTATGGACGGCGAAGACGCCTATGGCAGTTACGGATCCTACTCCAATTTCTCCGGCGCCTTCCCTGGGGACGCCGATGTAAGTGTCGAGCATACTCCTGCCTCGCCGGACGTCTTCGGATTCGACGATCCGAGCCCTAACTACTCTCAGGCTCCCTTTGATCCGATTCATGTGGAGAATGGAAATGGAAACGGCTATGGCGCGGTTGAGGATGAAGTCGGCGATGGTGTTTTCGTGTCCGATGGTCCAATTCTTCCGCCTCCGGGCGAGATGGGCGTGGAGGAAGGATATGCTCTTCGTGAATGGCGTCGCCAAAATGCCATTCAGCTTGAAGAGAAGGAGAAAAAGGAGAAAGAATTGAGAATCAAAATTATTGAAGAAGCCGAGGAATATAAAATAGGTTTCTATGAGAAAAGAAAGCTTAATGTTGAGAGTAACAAGGTTAACAACAGAGAAAGAGAGAAGTTATACTTGGCAAATCAGGAGAAGTTTCATAAAGAGGCCGATAAACAATACTGGAAAGCTATTGCAGAACTAGTTCCTAATGAAGTTCCTAATATTGAGAAAAAGAGAGGAAAGAAGGATCAAGAAAAGAAACCATCTATAATAGTTGTTCAGGGTCCAAAGCCTGGGAAACCTACCGATCTTTCAAGAATGCGACAAATTCTCGTGAAATTGAAGCACACACCCCCACCTCATATGAAACCACCCCCACCCCCACCTGCCAAGGATGCCAAAGATGCTAAAAATGGAAAGGAAACTAAGGATGCAAAGGATGGAAAGGATGGCAAAAATGAAAAAGATGCAGCAACAAAAGCATCTGATCCTGCACCTGGAGCTGCCACTGCCAATGGCACTTCTCACAAACCTCAAGAAGCAACTGCTGCTGCCGCTGCTCCTGCCGAAGTGGAGCAAACTGCCACATAATGACATAGCCATAGCCCTTATCAACTTCTTTCTGCTCAATACTTTTACATTTTCCCTTTGAGGTTTCGTTGTTTTTCGTTCGTTTATCCTTGCATTTGAATGTGTAATCAGTTGTGATCTTATACAACATTTATTCTTCTGTACCTTATGACGGTCTCTAGTGGCATATTATCTTTTGGACTAGTCGAGGTTCTGATTTTGACATTGCCACATCTTCTTTGAAATTATTTCTTCAGGTTAGCCTATTCATATTCTTCTCAGCCCATCTTCCTCCACTCTAGATGTTTGCTTCTGTAATCATGGGGTTATTTCGAGAACACTAGAATTGCCTTCAGATTCTTCTTGTGATTGATGTGAATTCTATTTGTGCTGTAGTTAATTTCTTATTCTTAAGGCTGAGTTCAGAATTAATTTTGAGTGGCTCATTTTGTTATATGTTTTATTTTATTTTTTTACAAAGTTTCTGAATGCAAAATCTTTATTGAATTTCAGACTA

Coding sequence (CDS)

ATGTCCACCTTCGACGCCTACAGTATGGACGGCGAAGACGCCTATGGCAGTTACGGATCCTACTCCAATTTCTCCGGCGCCTTCCCTGGGGACGCCGATGTAAGTGTCGAGCATACTCCTGCCTCGCCGGACGTCTTCGGATTCGACGATCCGAGCCCTAACTACTCTCAGGCTCCCTTTGATCCGATTCATGTGGAGAATGGAAATGGAAACGGCTATGGCGCGGTTGAGGATGAAGTCGGCGATGGTGTTTTCGTGTCCGATGGTCCAATTCTTCCGCCTCCGGGCGAGATGGGCGTGGAGGAAGGATATGCTCTTCGTGAATGGCGTCGCCAAAATGCCATTCAGCTTGAAGAGAAGGAGAAAAAGGAGAAAGAATTGAGAATCAAAATTATTGAAGAAGCCGAGGAATATAAAATAGGTTTCTATGAGAAAAGAAAGCTTAATGTTGAGAGTAACAAGGTTAACAACAGAGAAAGAGAGAAGTTATACTTGGCAAATCAGGAGAAGTTTCATAAAGAGGCCGATAAACAATACTGGAAAGCTATTGCAGAACTAGTTCCTAATGAAGTTCCTAATATTGAGAAAAAGAGAGGAAAGAAGGATCAAGAAAAGAAACCATCTATAATAGTTGTTCAGGGTCCAAAGCCTGGGAAACCTACCGATCTTTCAAGAATGCGACAAATTCTCGTGAAATTGAAGCACACACCCCCACCTCATATGAAACCACCCCCACCCCCACCTGCCAAGGATGCCAAAGATGCTAAAAATGGAAAGGAAACTAAGGATGCAAAGGATGGAAAGGATGGCAAAAATGAAAAAGATGCAGCAACAAAAGCATCTGATCCTGCACCTGGAGCTGCCACTGCCAATGGCACTTCTCACAAACCTCAAGAAGCAACTGCTGCTGCCGCTGCTCCTGCCGAAGTGGAGCAAACTGCCACATAA

Protein sequence

MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEKEKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYWKAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEATAAAAAPAEVEQTAT

Homology

[Close]

BLAST of Lsi01G003300 vs. ExPASy Swiss-Prot
Match: Q9SKU1 (Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.7e-73
Identity = 181/345 (52.46%), Postives = 212/345 (61.45%), Query Frame = 0


Query: 1   MSTFDAYSMDGE----DAYGSYGSYSNFSGA------FPGDADVSVEHTPASPDVFGFDD 60
           M+TFD      +      +  +G Y NFS A             S    PASP+ +GF  
Sbjct: 1   MATFDDGDFPAQTHSPSEHEDFGGYDNFSEAQQPPTQHQSGGFSSFNGDPASPNGYGFGA 60

Query: 61  PSPNYS-QAPFD-PIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALRE 120
            SPN+   +PF+  ++  NGNG G G      GD +F SDGPILP P EM  EEG+  RE
Sbjct: 61  SSPNHDFSSPFESSVNDANGNGGGSG------GDAIFASDGPILPDPNEMR-EEGFQRRE 120

Query: 121 WRRQNAIQLEEKEKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQ 180
           WRR N I LEEKEKKEKE+R +II EAE++K  FYEKR   +E+NK +NRE+EKLY ANQ
Sbjct: 121 WRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQ 180

Query: 181 EKFHKEADKQYWKAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQ 240
           EKFHKE DK YWKAIAEL+P EVPNIEKKRGKKD +KKPS+ V+QGPKPGKPTDL RMRQ
Sbjct: 181 EKFHKEVDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQ 240

Query: 241 ILVKLKHTPPPHMKPPPPP--PAKDAKDAKNGKETKDAKDGKDGKNEKDA---------- 300
           I +KLK  PPPHM PPPPP   AKD KDAK+GK+ K  KDGKD K  KDA          
Sbjct: 241 IFLKLKTNPPPHMMPPPPPAKDAKDGKDAKDGKDAKTGKDGKDAKGGKDAKDLKDGKPAD 300

Query: 301 --ATKASDPAPGA----------ATANGTSHKPQEATAAAAAPAE 310
              T+   P+P            A A+G   KP   T A    AE
Sbjct: 301 PKVTEEKRPSPAKDASVETAKPDAAASGEGEKPVAVTEAEGTKAE 338

[Close]

BLAST of Lsi01G003300 vs. ExPASy Swiss-Prot
Match: Q5Z402 (Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.9e-64
Identity = 159/291 (54.64%), Postives = 192/291 (65.98%), Query Frame = 0


Query: 20  SYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHVENGNGNGYGAVEDE 79
           S+  F  A P  A    +  P SP+ + F   +P    +PF       G     G++ D+
Sbjct: 21  SFLRFDAAAP--APAPADAFPPSPEPYAFRPDAP----SPF-------GMPEANGSLHDD 80

Query: 80  VGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEKEKKEKELRIKIIEEAEEYK 139
                   +GP+LPPP +MG +EG+ LREWRRQNAI LEEKEKKEKE+R +II +A+E+K
Sbjct: 81  PFAAPDNDNGPVLPPPNQMGADEGFLLREWRRQNAILLEEKEKKEKEMRNQIILDAKEFK 140

Query: 140 IGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYWKAIAELVPNEVPNIEKKRG 199
             F EKRKLNVE++K  NREREKLYLANQEKFH  ADKQYWKAI+EL+P+E+ NIEK+  
Sbjct: 141 KAFVEKRKLNVETSKDQNREREKLYLANQEKFHAGADKQYWKAISELIPHEIANIEKRGA 200

Query: 200 K--KDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKN 259
           K  KD+EKKP I+V+QGPKPGKPTD+SRMRQIL+KLKHTPPPHMKPPPPP A        
Sbjct: 201 KKDKDKEKKPGIVVIQGPKPGKPTDMSRMRQILLKLKHTPPPHMKPPPPPAAATG----- 260

Query: 260 GKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEATAAAAAPA 309
               KD   GKDG     AA+K        A+ANG S    E  AAAAAPA
Sbjct: 261 ----KDGAAGKDGAKVAAAASK-------DASANG-SVPEMEKAAAAAAPA 281

[Close]

BLAST of Lsi01G003300 vs. ExPASy Swiss-Prot
Match: Q7XKE9 (Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.6e-60
Identity = 166/319 (52.04%), Postives = 194/319 (60.82%), Query Frame = 0


Query: 4   FDAYSMDGEDAYG-------SYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYS 63
           FDA      DA G        YG Y++F      D +   E      +       S  +S
Sbjct: 21  FDADDDAAPDASGGAAADDTGYGGYASFVDGGVEDVEEEEEEIAVESEGVPIGHVSGGFS 80

Query: 64  QAPFDPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQ 123
            +PF P               D   DG    DGPILPPP +MG EEG  LREWRRQNAI 
Sbjct: 81  PSPFSP---------------DPELDG---GDGPILPPPAQMGAEEGILLREWRRQNAIV 140

Query: 124 LEEKEKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEAD 183
           LEEKE+KEKELR +I+ EAEE+K  FYEKR  N E+NKV+NREREK+++A QEKFH EAD
Sbjct: 141 LEEKERKEKELRAQILAEAEEFKKAFYEKRIQNCETNKVHNREREKIFVAGQEKFHAEAD 200

Query: 184 KQYWKAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHT 243
           KQYWK+I+EL+P+E+  IE KRGKKD++KKPSI V+QGPKPGKPTDLSRMRQILVKLKH 
Sbjct: 201 KQYWKSISELIPHEIATIE-KRGKKDKDKKPSITVIQGPKPGKPTDLSRMRQILVKLKHA 260

Query: 244 PPPHMKPPPPPPAKDAKDAKNGKETKDAKDG-KDGKNEKDAATKASDPAPGAATANGTSH 303
           PPPHM  PPP     A  AK+G     AKDG KDG            PAP    ANGT  
Sbjct: 261 PPPHMMQPPP-----ASAAKDG-----AKDGAKDG-----------TPAP----ANGTK- 294

Query: 304 KPQEA--TAAAAAPAEVEQ 313
           KP E+    A  +PAE E+
Sbjct: 321 KPAESKEKPANGSPAEAEK 294

[Close]

BLAST of Lsi01G003300 vs. ExPASy Swiss-Prot
Match: O04209 (Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.3e-58
Identity = 128/197 (64.97%), Postives = 155/197 (78.68%), Query Frame = 0


Query: 73  YGAVEDEVGDGVFVS----DGPILPPPGEMGVEEGYALREWRRQNAIQLEEKEKKEKELR 132
           YGA  +  GDG+F S    DGPILPPP EM  +EG+ALREWRRQNAIQLEEKEK+EKEL 
Sbjct: 56  YGAYSN--GDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELL 115

Query: 133 IKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYWKAIAELVP 192
            +IIEEA++YK  F++K ++  E+NK  NRE+EKLYL NQEKF+ E+ K YWKAIAELVP
Sbjct: 116 KQIIEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVP 175

Query: 193 NEVPNIEKKRGKKDQE--KKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPP 252
            EVP IEK+RGKK+Q+  KKP++ V+QGPKPGKPTDL+RMRQILVKLKH PP H+K    
Sbjct: 176 KEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQ 235

Query: 253 PPAKD-AKDAKNGKETK 263
           PP+++ A   KN  ETK
Sbjct: 236 PPSEEAAAPPKNVPETK 250

[Close]

BLAST of Lsi01G003300 vs. ExPASy Swiss-Prot
Match: Q6Z3A8 (Clathrin light chain 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0461500 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.9e-51
Identity = 147/310 (47.42%), Postives = 187/310 (60.32%), Query Frame = 0


Query: 19  GSYSNFSGA--FPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHVENGNGNGYGAV 78
           GS SN   A  + G  DV   H     DV G                 V  G+G   G +
Sbjct: 81  GSSSNGGAAYGYGGSGDVMNGHVDQIGDVMGGG---------------VVVGDG---GGI 140

Query: 79  EDEV----GDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEKEKKEKELRIKII 138
           +D++    GDG    DGP+LPPP  M  EEG   REWRRQNA+ LEEKE+KE+E R +II
Sbjct: 141 DDDLFAGAGDG---DDGPVLPPPEAM-KEEGILRREWRRQNALMLEEKERKERERRGEII 200

Query: 139 EEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYWKAIAELVPNEVP 198
            EA+E+K  F EKRKLN ++N+  NR+REKL+LA QEKFH EA+KQYWKAIAE+VP+E+P
Sbjct: 201 AEADEFKRSFAEKRKLNGDTNRAQNRDREKLFLAKQEKFHGEAEKQYWKAIAEMVPHEIP 260

Query: 199 NIEKKRGKKDQE--------KKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPP 258
            +EK+  +++++        K+P ++VVQG KPGKPTDLSRMRQ+L+KLK TPPPHM PP
Sbjct: 261 GLEKRGKRREKQSAEANAKAKQPGVVVVQGTKPGKPTDLSRMRQVLMKLKQTPPPHMAPP 320

Query: 259 PPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEATAAA 315
           PP PAKD      G +T   KDG+  K   +   KA+     AA            TAAA
Sbjct: 321 PPQPAKD-----TGGDTDANKDGEAEKAAGEIEKKAAGGEKEAAAG-------PPVTAAA 356

[Close]

BLAST of Lsi01G003300 vs. ExPASy TrEMBL
Match: A0A0A0KI18 (Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_6G517210 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 290/315 (92.06%), Postives = 301/315 (95.56%), Query Frame = 0


Query: 1   MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60
           MSTFDAYSMDGED+YG YGSY+NFSGAFPGDADV+VEHTPASPDVFGFDDPSPNYSQAPF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGAFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEK 120
           DPIHVENGNGNGYGA EDEVGDGVF SDGPILPPP EMGVEEGYALREWRRQNAIQLEEK
Sbjct: 61  DPIHVENGNGNGYGAAEDEVGDGVFASDGPILPPPSEMGVEEGYALREWRRQNAIQLEEK 120

Query: 121 EKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180
           EK+EKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW
Sbjct: 121 EKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180

Query: 181 KAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240
           KAIAEL+PNEVPNIEKKRGKKDQEKKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPH
Sbjct: 181 KAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240

Query: 241 MKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEA 300
           MKPPPPPPAKDAKDAK+ K+ KDAKDGKD KNEKDAATKASDP PGAATANGTSHKPQE 
Sbjct: 241 MKPPPPPPAKDAKDAKDTKDGKDAKDGKDAKNEKDAATKASDPTPGAATANGTSHKPQEP 300

Query: 301 TAAAAAPAEVEQTAT 316
           + A A  A+ +QTAT
Sbjct: 301 SVAPA--ADEDQTAT 313

[Close]

BLAST of Lsi01G003300 vs. ExPASy TrEMBL
Match: A0A5A7UC02 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003130 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.9e-154
Identity = 292/315 (92.70%), Postives = 301/315 (95.56%), Query Frame = 0


Query: 1   MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60
           MSTFDAYSMDGED+YG YGSY+NFSGAFPGDADV+VEHTPASPDVFGFDDPSPNYSQAPF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGAFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEK 120
           DPIHVENGNGNGYGA EDEVGDGVFVSDGPILPPP EMGVEEGYALREWRRQNAIQLEEK
Sbjct: 61  DPIHVENGNGNGYGAAEDEVGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQLEEK 120

Query: 121 EKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180
           EK+EKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW
Sbjct: 121 EKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180

Query: 181 KAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240
           KAIAEL+PNEVPNIEKKRGKKDQEKKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPH
Sbjct: 181 KAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240

Query: 241 MKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEA 300
           MKPPPPPPAKDAKDAK+G   KDAKDGKD KNEKDAATKASDP PGAATANGTSHKPQE 
Sbjct: 241 MKPPPPPPAKDAKDAKDG---KDAKDGKDAKNEKDAATKASDPVPGAATANGTSHKPQEP 300

Query: 301 TAAAAAPAEVEQTAT 316
           T A A  A+ +QTAT
Sbjct: 301 TVAPA--ADEDQTAT 310

[Close]

BLAST of Lsi01G003300 vs. ExPASy TrEMBL
Match: A0A1S3B0F4 (Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103484535 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.9e-154
Identity = 292/315 (92.70%), Postives = 301/315 (95.56%), Query Frame = 0


Query: 1   MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60
           MSTFDAYSMDGED+YG YGSY+NFSGAFPGDADV+VEHTPASPDVFGFDDPSPNYSQAPF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGAFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEK 120
           DPIHVENGNGNGYGA EDEVGDGVFVSDGPILPPP EMGVEEGYALREWRRQNAIQLEEK
Sbjct: 61  DPIHVENGNGNGYGAAEDEVGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQLEEK 120

Query: 121 EKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180
           EK+EKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW
Sbjct: 121 EKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180

Query: 181 KAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240
           KAIAEL+PNEVPNIEKKRGKKDQEKKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPH
Sbjct: 181 KAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240

Query: 241 MKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEA 300
           MKPPPPPPAKDAKDAK+G   KDAKDGKD KNEKDAATKASDP PGAATANGTSHKPQE 
Sbjct: 241 MKPPPPPPAKDAKDAKDG---KDAKDGKDAKNEKDAATKASDPVPGAATANGTSHKPQEP 300

Query: 301 TAAAAAPAEVEQTAT 316
           T A A  A+ +QTAT
Sbjct: 301 TVAPA--ADEDQTAT 310

[Close]

BLAST of Lsi01G003300 vs. ExPASy TrEMBL
Match: A0A5D3CQ24 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007340 PE=3 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 5.6e-154
Identity = 291/315 (92.38%), Postives = 300/315 (95.24%), Query Frame = 0


Query: 1   MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60
           MSTFDAYSMDGED+YG YGSY+NFSG FPGDADV+VEHTPASPDVFGFDDPSPNYSQAPF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGTFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEK 120
           DPIHVENGNGNGYGA EDEVGDGVFVSDGPILPPP EMGVEEGYALREWRRQNAIQLEEK
Sbjct: 61  DPIHVENGNGNGYGAAEDEVGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQLEEK 120

Query: 121 EKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180
           EK+EKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW
Sbjct: 121 EKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180

Query: 181 KAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240
           KAIAEL+PNEVPNIEKKRGKKDQEKKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPH
Sbjct: 181 KAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240

Query: 241 MKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEA 300
           MKPPPPPPAKDAKDAK+G   KDAKDGKD KNEKDAATKASDP PGAATANGTSHKPQE 
Sbjct: 241 MKPPPPPPAKDAKDAKDG---KDAKDGKDAKNEKDAATKASDPVPGAATANGTSHKPQEP 300

Query: 301 TAAAAAPAEVEQTAT 316
           T A A  A+ +QTAT
Sbjct: 301 TVAPA--ADEDQTAT 310

[Close]

BLAST of Lsi01G003300 vs. ExPASy TrEMBL
Match: A0A6J1EM09 (Clathrin light chain OS=Cucurbita moschata OX=3662 GN=LOC111433782 PE=3 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 7.6e-151
Identity = 284/306 (92.81%), Postives = 292/306 (95.42%), Query Frame = 0


Query: 1   MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60
           MS+FDAYSMDGEDAYG YGSY+NFSG FPGDADVSVEHT ASPDVFGFDDP  NYSQAPF
Sbjct: 1   MSSFDAYSMDGEDAYGGYGSYTNFSGGFPGDADVSVEHTAASPDVFGFDDPGTNYSQAPF 60

Query: 61  DPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEK 120
           DPIHVENGNGNGYG VEDEVGDGVFVSDGPILPPP EMGVEEGYALREWRRQNA+QLEEK
Sbjct: 61  DPIHVENGNGNGYGVVEDEVGDGVFVSDGPILPPPTEMGVEEGYALREWRRQNALQLEEK 120

Query: 121 EKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180
           EK+EKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLY ANQEKFHKEADKQYW
Sbjct: 121 EKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYSANQEKFHKEADKQYW 180

Query: 181 KAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240
           KAIAEL+PNEVPNIEKKRGKKDQ+KKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPH
Sbjct: 181 KAIAELIPNEVPNIEKKRGKKDQDKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240

Query: 241 MKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEA 300
           MKPPPPPPAKDAKDA   K+ KDAKDGKD KNEKDAATKASDPAPGAATANGTSHKPQE 
Sbjct: 241 MKPPPPPPAKDAKDA---KDAKDAKDGKDAKNEKDAATKASDPAPGAATANGTSHKPQEE 300

Query: 301 TAAAAA 307
           TAAAAA
Sbjct: 301 TAAAAA 303

[Close]

BLAST of Lsi01G003300 vs. NCBI nr
Match: XP_038882943.1 (clathrin light chain 1-like [Benincasa hispida])

HSP 1 Score: 558.9 bits (1439), Expect = 2.8e-155
Identity = 293/315 (93.02%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60
           MSTFDAYS+DGED+YG YGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF
Sbjct: 1   MSTFDAYSIDGEDSYGGYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEK 120
           DPIHVENGNGNGYGA EDE+GDGVFVSDGPILPPP EMGVEEGYALREWRRQNAIQLEEK
Sbjct: 61  DPIHVENGNGNGYGAAEDELGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQLEEK 120

Query: 121 EKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180
           EK+EKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW
Sbjct: 121 EKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180

Query: 181 KAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240
           KAIAEL+PNEVPNIEKKRGKKDQ+KKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH
Sbjct: 181 KAIAELIPNEVPNIEKKRGKKDQDKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240

Query: 241 MKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEA 300
           MKPPPPPPAKDAKDAK+ K+ KDAKDGKD K EKDAATKASDPAPGAATANGTSHKPQEA
Sbjct: 241 MKPPPPPPAKDAKDAKDAKDGKDAKDGKDAKKEKDAATKASDPAPGAATANGTSHKPQEA 300

Query: 301 TAAAAAPAEVEQTAT 316
            AA A  A+ +QTAT
Sbjct: 301 PAAPA--ADEDQTAT 313

[Close]

BLAST of Lsi01G003300 vs. NCBI nr
Match: XP_004134715.1 (clathrin light chain 1 [Cucumis sativus] >KGN49213.1 hypothetical protein Csa_003426 [Cucumis sativus])

HSP 1 Score: 555.4 bits (1430), Expect = 3.1e-154
Identity = 290/315 (92.06%), Postives = 301/315 (95.56%), Query Frame = 0


Query: 1   MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60
           MSTFDAYSMDGED+YG YGSY+NFSGAFPGDADV+VEHTPASPDVFGFDDPSPNYSQAPF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGAFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEK 120
           DPIHVENGNGNGYGA EDEVGDGVF SDGPILPPP EMGVEEGYALREWRRQNAIQLEEK
Sbjct: 61  DPIHVENGNGNGYGAAEDEVGDGVFASDGPILPPPSEMGVEEGYALREWRRQNAIQLEEK 120

Query: 121 EKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180
           EK+EKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW
Sbjct: 121 EKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180

Query: 181 KAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240
           KAIAEL+PNEVPNIEKKRGKKDQEKKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPH
Sbjct: 181 KAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240

Query: 241 MKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEA 300
           MKPPPPPPAKDAKDAK+ K+ KDAKDGKD KNEKDAATKASDP PGAATANGTSHKPQE 
Sbjct: 241 MKPPPPPPAKDAKDAKDTKDGKDAKDGKDAKNEKDAATKASDPTPGAATANGTSHKPQEP 300

Query: 301 TAAAAAPAEVEQTAT 316
           + A A  A+ +QTAT
Sbjct: 301 SVAPA--ADEDQTAT 313

[Close]

BLAST of Lsi01G003300 vs. NCBI nr
Match: XP_008439880.1 (PREDICTED: clathrin light chain 1-like [Cucumis melo] >KAA0052700.1 clathrin light chain 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 555.1 bits (1429), Expect = 4.0e-154
Identity = 292/315 (92.70%), Postives = 301/315 (95.56%), Query Frame = 0


Query: 1   MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60
           MSTFDAYSMDGED+YG YGSY+NFSGAFPGDADV+VEHTPASPDVFGFDDPSPNYSQAPF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGAFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEK 120
           DPIHVENGNGNGYGA EDEVGDGVFVSDGPILPPP EMGVEEGYALREWRRQNAIQLEEK
Sbjct: 61  DPIHVENGNGNGYGAAEDEVGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQLEEK 120

Query: 121 EKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180
           EK+EKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW
Sbjct: 121 EKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180

Query: 181 KAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240
           KAIAEL+PNEVPNIEKKRGKKDQEKKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPH
Sbjct: 181 KAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240

Query: 241 MKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEA 300
           MKPPPPPPAKDAKDAK+G   KDAKDGKD KNEKDAATKASDP PGAATANGTSHKPQE 
Sbjct: 241 MKPPPPPPAKDAKDAKDG---KDAKDGKDAKNEKDAATKASDPVPGAATANGTSHKPQEP 300

Query: 301 TAAAAAPAEVEQTAT 316
           T A A  A+ +QTAT
Sbjct: 301 TVAPA--ADEDQTAT 310

[Close]

BLAST of Lsi01G003300 vs. NCBI nr
Match: TYK13124.1 (clathrin light chain 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 553.5 bits (1425), Expect = 1.2e-153
Identity = 291/315 (92.38%), Postives = 300/315 (95.24%), Query Frame = 0


Query: 1   MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60
           MSTFDAYSMDGED+YG YGSY+NFSG FPGDADV+VEHTPASPDVFGFDDPSPNYSQAPF
Sbjct: 1   MSTFDAYSMDGEDSYGGYGSYTNFSGTFPGDADVTVEHTPASPDVFGFDDPSPNYSQAPF 60

Query: 61  DPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEK 120
           DPIHVENGNGNGYGA EDEVGDGVFVSDGPILPPP EMGVEEGYALREWRRQNAIQLEEK
Sbjct: 61  DPIHVENGNGNGYGAAEDEVGDGVFVSDGPILPPPSEMGVEEGYALREWRRQNAIQLEEK 120

Query: 121 EKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180
           EK+EKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW
Sbjct: 121 EKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180

Query: 181 KAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240
           KAIAEL+PNEVPNIEKKRGKKDQEKKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPH
Sbjct: 181 KAIAELIPNEVPNIEKKRGKKDQEKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240

Query: 241 MKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEA 300
           MKPPPPPPAKDAKDAK+G   KDAKDGKD KNEKDAATKASDP PGAATANGTSHKPQE 
Sbjct: 241 MKPPPPPPAKDAKDAKDG---KDAKDGKDAKNEKDAATKASDPVPGAATANGTSHKPQEP 300

Query: 301 TAAAAAPAEVEQTAT 316
           T A A  A+ +QTAT
Sbjct: 301 TVAPA--ADEDQTAT 310

[Close]

BLAST of Lsi01G003300 vs. NCBI nr
Match: XP_022926755.1 (clathrin light chain 1-like [Cucurbita moschata] >KAG7026582.1 Clathrin light chain 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 543.1 bits (1398), Expect = 1.6e-150
Identity = 284/306 (92.81%), Postives = 292/306 (95.42%), Query Frame = 0


Query: 1   MSTFDAYSMDGEDAYGSYGSYSNFSGAFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPF 60
           MS+FDAYSMDGEDAYG YGSY+NFSG FPGDADVSVEHT ASPDVFGFDDP  NYSQAPF
Sbjct: 1   MSSFDAYSMDGEDAYGGYGSYTNFSGGFPGDADVSVEHTAASPDVFGFDDPGTNYSQAPF 60

Query: 61  DPIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALREWRRQNAIQLEEK 120
           DPIHVENGNGNGYG VEDEVGDGVFVSDGPILPPP EMGVEEGYALREWRRQNA+QLEEK
Sbjct: 61  DPIHVENGNGNGYGVVEDEVGDGVFVSDGPILPPPTEMGVEEGYALREWRRQNALQLEEK 120

Query: 121 EKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYW 180
           EK+EKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLY ANQEKFHKEADKQYW
Sbjct: 121 EKREKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYSANQEKFHKEADKQYW 180

Query: 181 KAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240
           KAIAEL+PNEVPNIEKKRGKKDQ+KKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPH
Sbjct: 181 KAIAELIPNEVPNIEKKRGKKDQDKKPSILVVQGPKPGKPTDLSRMRQILVKLKHTPPPH 240

Query: 241 MKPPPPPPAKDAKDAKNGKETKDAKDGKDGKNEKDAATKASDPAPGAATANGTSHKPQEA 300
           MKPPPPPPAKDAKDA   K+ KDAKDGKD KNEKDAATKASDPAPGAATANGTSHKPQE 
Sbjct: 241 MKPPPPPPAKDAKDA---KDAKDAKDGKDAKNEKDAATKASDPAPGAATANGTSHKPQEE 300

Query: 301 TAAAAA 307
           TAAAAA
Sbjct: 301 TAAAAA 303

[Close]

BLAST of Lsi01G003300 vs. TAIR 10
Match: AT2G20760.1 (Clathrin light chain protein )

HSP 1 Score: 276.9 bits (707), Expect = 2.0e-74
Identity = 181/345 (52.46%), Postives = 212/345 (61.45%), Query Frame = 0


Query: 1   MSTFDAYSMDGE----DAYGSYGSYSNFSGA------FPGDADVSVEHTPASPDVFGFDD 60
           M+TFD      +      +  +G Y NFS A             S    PASP+ +GF  
Sbjct: 1   MATFDDGDFPAQTHSPSEHEDFGGYDNFSEAQQPPTQHQSGGFSSFNGDPASPNGYGFGA 60

Query: 61  PSPNYS-QAPFD-PIHVENGNGNGYGAVEDEVGDGVFVSDGPILPPPGEMGVEEGYALRE 120
            SPN+   +PF+  ++  NGNG G G      GD +F SDGPILP P EM  EEG+  RE
Sbjct: 61  SSPNHDFSSPFESSVNDANGNGGGSG------GDAIFASDGPILPDPNEMR-EEGFQRRE 120

Query: 121 WRRQNAIQLEEKEKKEKELRIKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQ 180
           WRR N I LEEKEKKEKE+R +II EAE++K  FYEKR   +E+NK +NRE+EKLY ANQ
Sbjct: 121 WRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQ 180

Query: 181 EKFHKEADKQYWKAIAELVPNEVPNIEKKRGKKDQEKKPSIIVVQGPKPGKPTDLSRMRQ 240
           EKFHKE DK YWKAIAEL+P EVPNIEKKRGKKD +KKPS+ V+QGPKPGKPTDL RMRQ
Sbjct: 181 EKFHKEVDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQ 240

Query: 241 ILVKLKHTPPPHMKPPPPP--PAKDAKDAKNGKETKDAKDGKDGKNEKDA---------- 300
           I +KLK  PPPHM PPPPP   AKD KDAK+GK+ K  KDGKD K  KDA          
Sbjct: 241 IFLKLKTNPPPHMMPPPPPAKDAKDGKDAKDGKDAKTGKDGKDAKGGKDAKDLKDGKPAD 300

Query: 301 --ATKASDPAPGA----------ATANGTSHKPQEATAAAAAPAE 310
              T+   P+P            A A+G   KP   T A    AE
Sbjct: 301 PKVTEEKRPSPAKDASVETAKPDAAASGEGEKPVAVTEAEGTKAE 338

[Close]

BLAST of Lsi01G003300 vs. TAIR 10
Match: AT2G40060.1 (Clathrin light chain protein )

HSP 1 Score: 225.7 bits (574), Expect = 5.2e-59
Identity = 128/197 (64.97%), Postives = 155/197 (78.68%), Query Frame = 0


Query: 73  YGAVEDEVGDGVFVS----DGPILPPPGEMGVEEGYALREWRRQNAIQLEEKEKKEKELR 132
           YGA  +  GDG+F S    DGPILPPP EM  +EG+ALREWRRQNAIQLEEKEK+EKEL 
Sbjct: 56  YGAYSN--GDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELL 115

Query: 133 IKIIEEAEEYKIGFYEKRKLNVESNKVNNREREKLYLANQEKFHKEADKQYWKAIAELVP 192
            +IIEEA++YK  F++K ++  E+NK  NRE+EKLYL NQEKF+ E+ K YWKAIAELVP
Sbjct: 116 KQIIEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVP 175

Query: 193 NEVPNIEKKRGKKDQE--KKPSIIVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPP 252
            EVP IEK+RGKK+Q+  KKP++ V+QGPKPGKPTDL+RMRQILVKLKH PP H+K    
Sbjct: 176 KEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQ 235

Query: 253 PPAKD-AKDAKNGKETK 263
           PP+++ A   KN  ETK
Sbjct: 236 PPSEEAAAPPKNVPETK 250

[Close]

BLAST of Lsi01G003300 vs. TAIR 10
Match: AT3G51890.1 (Clathrin light chain protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.4e-48
Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 91  ILPPPGEMGVEEGYALREWRRQNAIQLEEKEKKEKELRIKIIEEAEEYKIGFYEKRKLNV 150
           ILPPP  M  EEG+ALREWRR NA++LEEKEK+EKE+  +I+E AE+YK  FY KR + +
Sbjct: 85  ILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKAEFYSKRNVTI 144

Query: 151 ESNKVNNREREKLYLANQEKFHKEADKQYWKAIAELVPNEVPNIEKKRGKKDQEKKPSII 210
           E+NK  NRE+EK +L NQEKF+ EADK  WKAIAEL+P EVP IE +  KK   K  +I 
Sbjct: 145 ENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVPVIENRGNKK---KTATIT 204

Query: 211 VVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPA 250
           V+QGPKPGKPTDLSRMRQ+L KLKH PP HMKP  P P+
Sbjct: 205 VIQGPKPGKPTDLSRMRQVLTKLKHNPPTHMKPKLPSPS 240

The following BLAST results are available for this feature:

BLAST of Lsi01G003300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKU1	2.7e-73	52.46	Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1	[more]
Q5Z402	8.9e-64	54.64	Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 ...	[more]
Q7XKE9	1.6e-60	52.04	Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 ...	[more]
O04209	7.3e-58	64.97	Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1	[more]
Q6Z3A8	3.9e-51	47.42	Clathrin light chain 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0461500 ...	[more]

BLAST of Lsi01G003300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI18	1.5e-154	92.06	Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_6G517210 PE=3 SV=1	[more]
A0A5A7UC02	1.9e-154	92.70	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120...	[more]
A0A1S3B0F4	1.9e-154	92.70	Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103484535 PE=3 SV=1	[more]
A0A5D3CQ24	5.6e-154	92.38	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255...	[more]
A0A6J1EM09	7.6e-151	92.81	Clathrin light chain OS=Cucurbita moschata OX=3662 GN=LOC111433782 PE=3 SV=1	[more]

BLAST of Lsi01G003300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882943.1	2.8e-155	93.02	clathrin light chain 1-like [Benincasa hispida]	[more]
XP_004134715.1	3.1e-154	92.06	clathrin light chain 1 [Cucumis sativus] >KGN49213.1 hypothetical protein Csa_00...	[more]
XP_008439880.1	4.0e-154	92.70	PREDICTED: clathrin light chain 1-like [Cucumis melo] >KAA0052700.1 clathrin lig...	[more]
TYK13124.1	1.2e-153	92.38	clathrin light chain 1-like [Cucumis melo var. makuwa]	[more]
XP_022926755.1	1.6e-150	92.81	clathrin light chain 1-like [Cucurbita moschata] >KAG7026582.1 Clathrin light ch...	[more]

BLAST of Lsi01G003300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20760.1	2.0e-74	52.46	Clathrin light chain protein	[more]
AT2G40060.1	5.2e-59	64.97	Clathrin light chain protein	[more]
AT3G51890.1	2.4e-48	64.15	Clathrin light chain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..60
None	No IPR available	PANTHER	PTHR10639:SF32	CLATHRIN LIGHT CHAIN	coord: 10..304
IPR000996	Clathrin light chain	PFAM	PF01086	Clathrin_lg_ch	coord: 101..205 e-value: 1.2E-7 score: 32.0
IPR000996	Clathrin light chain	PANTHER	PTHR10639	CLATHRIN LIGHT CHAIN	coord: 10..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G003300.1	Lsi01G003300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048268	clathrin coat assembly
biological_process	GO:0072583	clathrin-dependent endocytosis
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
molecular_function	GO:0032050	clathrin heavy chain binding
molecular_function	GO:0005198	structural molecule activity