Lsi01G002980 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G002980
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ethylene-responsive transcription factor 4-like
Location	chr01: 2656867 .. 2657607 (+)
RNA-Seq Expression	Lsi01G002980
Synteny	Lsi01G002980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCGAGAGATAAGGCGGTGGCCATCAAGCCCAACGTCGGTAACGTCAAGGAAGTGCATTTTAGAGGAGTGAGGAAGCGGCCATGGGGGAGATACGCAGCTGAGATCAGAGATCCCTGCAAAAAGAGCCGTGTTTGGCTTGGAACCTTTGATACGGCGGAGGAGGCGGCACGAGCCTACGATAACGCCGCTAGAGAGTTCCGCGGCGTCAAGGCCAAGACCAATTTCCCTTTGCCTTCCGACGATCAGCTTCTTAACCTTAACAATAAGATTAACAGCATCAACAATAATCAGAGCCCGAGTCAGAGTAGCACGGTTGAGTCCTCTAGCCGGGAGCAAGCTCTGATGGTTGATTCCTCGCCTTTGAATCTCAATCTCGATCACGGTATTGGCGGACTCGCAACCGCCGGACCCATCAGTTTTCCATTTCAGCGGTACCAAATTCCCGTGATCGGAGAAGTTTTTACCCGTGGCATACCGTCGTCGAATCACGTTCTGTATTTCGATGCCGCTCTTCGTGCAGGAATGATCAAGAGTCATCCTCACCATCCTCACCAACGGCTACGCTTCGACCATCTTCGCGAAGCGGTGAGTGATTTCCGACGCGAGTTTGCCGGCGGCGGTGTTCAGAGCGACTCCGACTCCTCCTCCGTTGTGGACATGAACGGCCAAGACCTCAAACCCAGAGGAGGCGGCCTGGATTTGGATCTGAACTTCCCCCCACCAGAATCCGCCTGA

mRNA sequence

ATGGCGCCGAGAGATAAGGCGGTGGCCATCAAGCCCAACGTCGGTAACGTCAAGGAAGTGCATTTTAGAGGAGTGAGGAAGCGGCCATGGGGGAGATACGCAGCTGAGATCAGAGATCCCTGCAAAAAGAGCCGTGTTTGGCTTGGAACCTTTGATACGGCGGAGGAGGCGGCACGAGCCTACGATAACGCCGCTAGAGAGTTCCGCGGCGTCAAGGCCAAGACCAATTTCCCTTTGCCTTCCGACGATCAGCTTCTTAACCTTAACAATAAGATTAACAGCATCAACAATAATCAGAGCCCGAGTCAGAGTAGCACGGTTGAGTCCTCTAGCCGGGAGCAAGCTCTGATGGTTGATTCCTCGCCTTTGAATCTCAATCTCGATCACGGTATTGGCGGACTCGCAACCGCCGGACCCATCAGTTTTCCATTTCAGCGGTACCAAATTCCCGTGATCGGAGAAGTTTTTACCCGTGGCATACCGTCGTCGAATCACGTTCTGTATTTCGATGCCGCTCTTCGTGCAGGAATGATCAAGAGTCATCCTCACCATCCTCACCAACGGCTACGCTTCGACCATCTTCGCGAAGCGGTGAGTGATTTCCGACGCGAGTTTGCCGGCGGCGGTGTTCAGAGCGACTCCGACTCCTCCTCCGTTGTGGACATGAACGGCCAAGACCTCAAACCCAGAGGAGGCGGCCTGGATTTGGATCTGAACTTCCCCCCACCAGAATCCGCCTGA

Coding sequence (CDS)

ATGGCGCCGAGAGATAAGGCGGTGGCCATCAAGCCCAACGTCGGTAACGTCAAGGAAGTGCATTTTAGAGGAGTGAGGAAGCGGCCATGGGGGAGATACGCAGCTGAGATCAGAGATCCCTGCAAAAAGAGCCGTGTTTGGCTTGGAACCTTTGATACGGCGGAGGAGGCGGCACGAGCCTACGATAACGCCGCTAGAGAGTTCCGCGGCGTCAAGGCCAAGACCAATTTCCCTTTGCCTTCCGACGATCAGCTTCTTAACCTTAACAATAAGATTAACAGCATCAACAATAATCAGAGCCCGAGTCAGAGTAGCACGGTTGAGTCCTCTAGCCGGGAGCAAGCTCTGATGGTTGATTCCTCGCCTTTGAATCTCAATCTCGATCACGGTATTGGCGGACTCGCAACCGCCGGACCCATCAGTTTTCCATTTCAGCGGTACCAAATTCCCGTGATCGGAGAAGTTTTTACCCGTGGCATACCGTCGTCGAATCACGTTCTGTATTTCGATGCCGCTCTTCGTGCAGGAATGATCAAGAGTCATCCTCACCATCCTCACCAACGGCTACGCTTCGACCATCTTCGCGAAGCGGTGAGTGATTTCCGACGCGAGTTTGCCGGCGGCGGTGTTCAGAGCGACTCCGACTCCTCCTCCGTTGTGGACATGAACGGCCAAGACCTCAAACCCAGAGGAGGCGGCCTGGATTTGGATCTGAACTTCCCCCCACCAGAATCCGCCTGA

Protein sequence

MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDSSPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKSHPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGGLDLDLNFPPPESA

Homology

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BLAST of Lsi01G002980 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 8.2e-41
Identity = 113/237 (47.68%), Postives = 137/237 (57.81%), Query Frame = 0


Query: 17  VKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDNAAREFRGVKAKTN 76
           VKEVH+RGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAA+AYD AAREFRG KAKTN
Sbjct: 22  VKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTN 81

Query: 77  FPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMV-DSSPLNLNLDHGIGGLA 136
           FP P++               NQSPS SSTVESSS E  +     +PL L+L   +G +A
Sbjct: 82  FPSPTE---------------NQSPSHSSTVESSSGENGVHAPPHAPLELDLTRRLGSVA 141

Query: 137 T--------AGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMI-KSHPHHPH 196
                    +G + +P   +Q P +       +P+   VL FD+  RAG++ +  P+H  
Sbjct: 142 ADGGDNCRRSGEVGYPI-FHQQPTVAV-----LPNGQPVLLFDSLWRAGVVNRPQPYH-- 201

Query: 197 QRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGGLDLDLNFPPP 244
                         F    AG G  + SDSSS V+ N  D K    G+DLDLN  PP
Sbjct: 202 ---------VTPMGFNGVNAGVG-PTVSDSSSAVEENQYDGK---RGIDLDLNLAPP 222

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BLAST of Lsi01G002980 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40
Identity = 113/240 (47.08%), Postives = 136/240 (56.67%), Query Frame = 0


Query: 17  VKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDNAAREFRGVKAKTN 76
           VKEVH+RGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAA+AYD AAREFRG KAKTN
Sbjct: 22  VKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTN 81

Query: 77  FPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMV-DSSPLNLNLDHGIGGLA 136
           FPLPS+               NQS S SST+ESSS E  +     +PL L+L   +G +A
Sbjct: 82  FPLPSE---------------NQSTSHSSTMESSSGETGIHAPPHAPLELDLTRRLGSVA 141

Query: 137 T--------AGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMI-KSHPHHPH 196
                    +G + +P   +Q P +       +P+   VL FD+  R G++ +  P+H  
Sbjct: 142 ADGGDNCRRSGEVGYPI-FHQQPTVAV-----LPNGQPVLLFDSLWRPGVVNRPQPYH-- 201

Query: 197 QRLRFDHLREAVSDFRREFAGGGVQSD---SDSSSVVDMNGQDLKPRGGGLDLDLNFPPP 244
                      V      F G     D   SDSSSVV+ N  D K    G+DLDLN  PP
Sbjct: 202 -----------VMPMAMGFNGVNAGVDPTVSDSSSVVEENQYDGK---RGIDLDLNLAPP 224

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BLAST of Lsi01G002980 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.1e-36
Identity = 108/235 (45.96%), Postives = 133/235 (56.60%), Query Frame = 0


Query: 16  NVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDNAAREFRGVKAKT 75
           N KE+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYD AAR+FRG KAKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 76  NFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDSS-------PLNLNLD 135
           NFP       L L+++       +SPSQSST++ +S    L+V S+        L L+L 
Sbjct: 79  NFP-----TFLELSDQKVPTGFARSPSQSSTLDCAS-PPTLVVPSATAGNVPPQLELSLG 138

Query: 136 HGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKSHPHHPHQR 195
            G GG     P+S P     +  IG V  RG P         +A R+ ++          
Sbjct: 139 GGGGGSCYQIPMSRPVYFLDLMGIGNV-GRGQPPP-----VTSAFRSPVV---------- 198

Query: 196 LRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGGLDLDLNFPPP 244
               H+   ++         G QSDSDSSSVVD  G  ++ R   LDLDLN PPP
Sbjct: 199 ----HVATKMA--------CGAQSDSDSSSVVDFEG-GMEKRSQLLDLDLNLPPP 218

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BLAST of Lsi01G002980 vs. ExPASy Swiss-Prot
Match: Q9C5I3 (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-30
Identity = 106/243 (43.62%), Postives = 122/243 (50.21%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAP  K  A+K N GN   V +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT EEAARA
Sbjct: 1   MAPTVKTAAVKTNEGN--GVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YD  A EFRG KAKTNFP          N   + ++  QS SQSSTVESS          
Sbjct: 61  YDKRAIEFRGAKAKTNFPC--------YNINAHCLSLTQSLSQSSTVESSFP-------- 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
              NLNL  G   +++     FPF + Q+                        +AGM   
Sbjct: 121 ---NLNL--GSDSVSS----RFPFPKIQV------------------------KAGM--- 163

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGGLDLDLNF 240
                   + FD                  +S+SDSSSVV M+    + R   LDLDLNF
Sbjct: 181 --------MVFDE-----------------RSESDSSSVV-MDVVRYEGRRVVLDLDLNF 163

Query: 241 PPP 244
           PPP
Sbjct: 241 PPP 163

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BLAST of Lsi01G002980 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-28
Identity = 68/108 (62.96%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MAPRD---KAVAIKPNVGNV--------KEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLG 60
           MAPR    +++A+    G          KEVHFRGVRKRPWGRYAAEIRDP KK+RVWLG
Sbjct: 1   MAPRQANGRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLG 60

Query: 61  TFDTAEEAARAYDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINN 98
           TFDTAEEAARAYD AAREFRG KAKTNFPLP +   +N   + +S  N
Sbjct: 61  TFDTAEEAARAYDTAAREFRGSKAKTNFPLPGESTTVNDGGENDSYVN 108

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BLAST of Lsi01G002980 vs. ExPASy TrEMBL
Match: A0A5A7UGN5 (Ethylene-responsive transcription factor 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007640 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.4e-121
Identity = 224/249 (89.96%), Postives = 233/249 (93.57%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPR+KAVA+KPNVGNVKEVHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPSKKSRVWLGTFDTAEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YDNAAREFRGVKAKTNFPLPSDD+LLNLNNKIN+INNNQSPSQSSTVESSSREQALMVDS
Sbjct: 61  YDNAAREFRGVKAKTNFPLPSDDKLLNLNNKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
           SPL+LNL HGIGGL TAGPISFPFQRYQIP+IGEVFTRGIP SNHVLYFDAALR GMI S
Sbjct: 121 SPLDLNLGHGIGGLTTAGPISFPFQRYQIPMIGEVFTRGIPPSNHVLYFDAALRTGMINS 180

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGG---LDLD 240
              HP+QRL FD +REAVSDFRR+FAG GVQSDSDSSSVVDMNGQDLKPRGG    LDLD
Sbjct: 181 ---HPNQRLHFDRIREAVSDFRRDFAGSGVQSDSDSSSVVDMNGQDLKPRGGSGGRLDLD 240

Query: 241 LNFPPPESA 247
           LNFPPPESA
Sbjct: 241 LNFPPPESA 246

[Close]

BLAST of Lsi01G002980 vs. ExPASy TrEMBL
Match: A0A1S3B0A2 (ethylene-responsive transcription factor 4-like OS=Cucumis melo OX=3656 GN=LOC103484503 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.4e-121
Identity = 224/249 (89.96%), Postives = 233/249 (93.57%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPR+KAVA+KPNVGNVKEVHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPSKKSRVWLGTFDTAEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YDNAAREFRGVKAKTNFPLPSDD+LLNLNNKIN+INNNQSPSQSSTVESSSREQALMVDS
Sbjct: 61  YDNAAREFRGVKAKTNFPLPSDDKLLNLNNKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
           SPL+LNL HGIGGL TAGPISFPFQRYQIP+IGEVFTRGIP SNHVLYFDAALR GMI S
Sbjct: 121 SPLDLNLGHGIGGLTTAGPISFPFQRYQIPMIGEVFTRGIPPSNHVLYFDAALRTGMINS 180

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGG---LDLD 240
              HP+QRL FD +REAVSDFRR+FAG GVQSDSDSSSVVDMNGQDLKPRGG    LDLD
Sbjct: 181 ---HPNQRLHFDRIREAVSDFRRDFAGSGVQSDSDSSSVVDMNGQDLKPRGGSGGRLDLD 240

Query: 241 LNFPPPESA 247
           LNFPPPESA
Sbjct: 241 LNFPPPESA 246

[Close]

BLAST of Lsi01G002980 vs. ExPASy TrEMBL
Match: Q5S004 (Ethylene response factor 1 OS=Cucumis sativus OX=3659 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120
Identity = 224/249 (89.96%), Postives = 233/249 (93.57%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPR+KAVA+KP+VGNVKEVHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKPSVGNVKEVHFRGVRKRPWGRYAAEIRDPSKKSRVWLGTFDTAEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YD+AAR+FRGVKAKTNFPLPSDDQLLNLNNKIN+INNNQSPSQSSTVESSSREQALMVDS
Sbjct: 61  YDSAARDFRGVKAKTNFPLPSDDQLLNLNNKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
           SPLNLNL HGIGGL  AGPISFPFQRYQIP+IGEVFTRGIP SNHVLYFDAALRAGMI S
Sbjct: 121 SPLNLNLGHGIGGLTNAGPISFPFQRYQIPMIGEVFTRGIPPSNHVLYFDAALRAGMINS 180

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGG---LDLD 240
              HP+QRL FD +REAVSDFRREFAG GVQSDSDSSSVVDMNGQDLKPRGG    LDLD
Sbjct: 181 ---HPNQRLHFDRIREAVSDFRREFAGSGVQSDSDSSSVVDMNGQDLKPRGGSGGRLDLD 240

Query: 241 LNFPPPESA 247
           LNFPPPESA
Sbjct: 241 LNFPPPESA 246

[Close]

BLAST of Lsi01G002980 vs. ExPASy TrEMBL
Match: A0A6J1EIT5 (ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433009 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.3e-118
Identity = 221/251 (88.05%), Postives = 232/251 (92.43%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPR+KAVA+K NVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YD AAREFRGVKAKTNFPLPSDD LLNLNNKIN+INNNQSPSQSSTVESSSREQ LMVDS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDD-LLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDS 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
           SPLNLNL HG+ GL  AG ++FPFQRYQIP+IGEVF+RGIP SNHVLYFDAALRAGMIK+
Sbjct: 121 SPLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKT 180

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRG-----GGLD 240
           HP HP+QRLRFDH  EAVSDFRRE+AGGGVQSDSDSSSVVDMNGQDLKPR      GGLD
Sbjct: 181 HP-HPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLD 240

Query: 241 LDLNFPPPESA 247
           LDLNFPPPESA
Sbjct: 241 LDLNFPPPESA 249

[Close]

BLAST of Lsi01G002980 vs. ExPASy TrEMBL
Match: A0A6J1ILY8 (ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111478617 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 218/250 (87.20%), Postives = 231/250 (92.40%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPR+KAVA+K NVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YD AAREFRGVKAKTNFP+PS D LLNLNNKIN I+NNQSPSQSSTVESSSREQ LMVDS
Sbjct: 61  YDKAAREFRGVKAKTNFPMPSYD-LLNLNNKIN-ISNNQSPSQSSTVESSSREQPLMVDS 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
           SPLNLNL HG+ GL + G ++FPFQRYQIP+IGEVF+RGIP SNHVLYFDAALRAGMIK+
Sbjct: 121 SPLNLNLGHGMPGLTSTGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKT 180

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRG----GGLDL 240
           HP HP+QRLRFDH  EAVSDFRRE+AGGGVQSDSDSSSVVDMNGQDLKPRG    GGLDL
Sbjct: 181 HP-HPNQRLRFDHHPEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRGGVGVGGLDL 240

Query: 241 DLNFPPPESA 247
           DLNFPPPESA
Sbjct: 241 DLNFPPPESA 247

[Close]

BLAST of Lsi01G002980 vs. NCBI nr
Match: XP_038883348.1 (ethylene-responsive transcription factor 4-like [Benincasa hispida])

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-126
Identity = 232/250 (92.80%), Postives = 239/250 (95.60%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPR+KA+A+KPNVGNVK+VHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAIAVKPNVGNVKDVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YDNAAREFRGVKAKTNFPLPSDDQLLNLN KIN+INNNQSPSQSSTVESSSREQALMVDS
Sbjct: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNKKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTR-GIPSSNHVLYFDAALRAGMIK 180
           SPLNLNL HGIGGL TAGPISFPFQR+QIPVIGEVFTR GIP SNHVLYFDAALRAGMIK
Sbjct: 121 SPLNLNLGHGIGGLTTAGPISFPFQRFQIPVIGEVFTRGGIPPSNHVLYFDAALRAGMIK 180

Query: 181 SHPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPR---GGGLDL 240
           SHPHHP+QRLRFDHLREAVSDFRRE A GGVQSDSDSSSVVDMNG DLKPR   GGGLDL
Sbjct: 181 SHPHHPNQRLRFDHLREAVSDFRRELASGGVQSDSDSSSVVDMNGPDLKPRGGGGGGLDL 240

Query: 241 DLNFPPPESA 247
           DLNFPPPESA
Sbjct: 241 DLNFPPPESA 250

[Close]

BLAST of Lsi01G002980 vs. NCBI nr
Match: XP_008439819.1 (PREDICTED: ethylene-responsive transcription factor 4-like [Cucumis melo] >KAA0052671.1 ethylene-responsive transcription factor 4-like [Cucumis melo var. makuwa] >TYK13153.1 ethylene-responsive transcription factor 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-120
Identity = 224/249 (89.96%), Postives = 233/249 (93.57%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPR+KAVA+KPNVGNVKEVHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPSKKSRVWLGTFDTAEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YDNAAREFRGVKAKTNFPLPSDD+LLNLNNKIN+INNNQSPSQSSTVESSSREQALMVDS
Sbjct: 61  YDNAAREFRGVKAKTNFPLPSDDKLLNLNNKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
           SPL+LNL HGIGGL TAGPISFPFQRYQIP+IGEVFTRGIP SNHVLYFDAALR GMI S
Sbjct: 121 SPLDLNLGHGIGGLTTAGPISFPFQRYQIPMIGEVFTRGIPPSNHVLYFDAALRTGMINS 180

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGG---LDLD 240
              HP+QRL FD +REAVSDFRR+FAG GVQSDSDSSSVVDMNGQDLKPRGG    LDLD
Sbjct: 181 ---HPNQRLHFDRIREAVSDFRRDFAGSGVQSDSDSSSVVDMNGQDLKPRGGSGGRLDLD 240

Query: 241 LNFPPPESA 247
           LNFPPPESA
Sbjct: 241 LNFPPPESA 246

[Close]

BLAST of Lsi01G002980 vs. NCBI nr
Match: NP_001267525.1 (ethylene-responsive transcription factor 4-like [Cucumis sativus] >AAV66332.1 ethylene response factor 1 [Cucumis sativus] >KGN49247.1 hypothetical protein Csa_004057 [Cucumis sativus])

HSP 1 Score: 442.6 bits (1137), Expect = 2.3e-120
Identity = 224/249 (89.96%), Postives = 233/249 (93.57%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPR+KAVA+KP+VGNVKEVHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKPSVGNVKEVHFRGVRKRPWGRYAAEIRDPSKKSRVWLGTFDTAEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YD+AAR+FRGVKAKTNFPLPSDDQLLNLNNKIN+INNNQSPSQSSTVESSSREQALMVDS
Sbjct: 61  YDSAARDFRGVKAKTNFPLPSDDQLLNLNNKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
           SPLNLNL HGIGGL  AGPISFPFQRYQIP+IGEVFTRGIP SNHVLYFDAALRAGMI S
Sbjct: 121 SPLNLNLGHGIGGLTNAGPISFPFQRYQIPMIGEVFTRGIPPSNHVLYFDAALRAGMINS 180

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGG---LDLD 240
              HP+QRL FD +REAVSDFRREFAG GVQSDSDSSSVVDMNGQDLKPRGG    LDLD
Sbjct: 181 ---HPNQRLHFDRIREAVSDFRREFAGSGVQSDSDSSSVVDMNGQDLKPRGGSGGRLDLD 240

Query: 241 LNFPPPESA 247
           LNFPPPESA
Sbjct: 241 LNFPPPESA 246

[Close]

BLAST of Lsi01G002980 vs. NCBI nr
Match: KAG6604462.1 (Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-118
Identity = 221/250 (88.40%), Postives = 232/250 (92.80%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPR+KAVA+K NVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YD AAREFRGVKAKTNFPLPSDD LLNLNNKIN+INNNQSPSQSSTVESSSREQ LMVDS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDD-LLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDS 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
           SPLNLNL HG+ GL  AG ++FPFQRYQIP+IGEVF+RGIP SNHVLYFDAALRAGMIK+
Sbjct: 121 SPLNLNLSHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKT 180

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRG----GGLDL 240
           HP HP+QRLRFDH  EAVSDFRRE+AGGGVQSDSDSSSVVDMNGQDLKPR     GGLDL
Sbjct: 181 HP-HPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGVGGLDL 240

Query: 241 DLNFPPPESA 247
           DLNFPPPESA
Sbjct: 241 DLNFPPPESA 248

[Close]

BLAST of Lsi01G002980 vs. NCBI nr
Match: XP_023545040.1 (ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 221/250 (88.40%), Postives = 232/250 (92.80%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPR+KAVA+K NVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YD AAREFRGVKAKTNFPLPSDD LLNLNNKIN+INNNQSPSQSSTVESSSREQ LMVDS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDD-LLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDS 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
           SPLNLNL HG+ GL  AG ++FPFQRYQIP+IGEVF+RGIP SNHVLYFDAALRAGMIK+
Sbjct: 121 SPLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKT 180

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRG----GGLDL 240
           HP HP+QRLRFDH  EAVSDFRRE+AGGGVQSDSDSSSVVDMNGQDLKPR     GGLDL
Sbjct: 181 HP-HPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGVGGLDL 240

Query: 241 DLNFPPPESA 247
           DLNFPPPESA
Sbjct: 241 DLNFPPPESA 248

[Close]

BLAST of Lsi01G002980 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 152.5 bits (384), Expect = 4.3e-37
Identity = 108/235 (45.96%), Postives = 133/235 (56.60%), Query Frame = 0


Query: 16  NVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDNAAREFRGVKAKT 75
           N KE+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYD AAR+FRG KAKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 76  NFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDSS-------PLNLNLD 135
           NFP       L L+++       +SPSQSST++ +S    L+V S+        L L+L 
Sbjct: 79  NFP-----TFLELSDQKVPTGFARSPSQSSTLDCAS-PPTLVVPSATAGNVPPQLELSLG 138

Query: 136 HGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKSHPHHPHQR 195
            G GG     P+S P     +  IG V  RG P         +A R+ ++          
Sbjct: 139 GGGGGSCYQIPMSRPVYFLDLMGIGNV-GRGQPPP-----VTSAFRSPVV---------- 198

Query: 196 LRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGGLDLDLNFPPP 244
               H+   ++         G QSDSDSSSVVD  G  ++ R   LDLDLN PPP
Sbjct: 199 ----HVATKMA--------CGAQSDSDSSSVVDFEG-GMEKRSQLLDLDLNLPPP 218

[Close]

BLAST of Lsi01G002980 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-31
Identity = 106/243 (43.62%), Postives = 122/243 (50.21%), Query Frame = 0


Query: 1   MAPRDKAVAIKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAP  K  A+K N GN   V +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT EEAARA
Sbjct: 1   MAPTVKTAAVKTNEGN--GVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARA 60

Query: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDS 120
           YD  A EFRG KAKTNFP          N   + ++  QS SQSSTVESS          
Sbjct: 61  YDKRAIEFRGAKAKTNFPC--------YNINAHCLSLTQSLSQSSTVESSFP-------- 120

Query: 121 SPLNLNLDHGIGGLATAGPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKS 180
              NLNL  G   +++     FPF + Q+                        +AGM   
Sbjct: 121 ---NLNL--GSDSVSS----RFPFPKIQV------------------------KAGM--- 163

Query: 181 HPHHPHQRLRFDHLREAVSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGGLDLDLNF 240
                   + FD                  +S+SDSSSVV M+    + R   LDLDLNF
Sbjct: 181 --------MVFDE-----------------RSESDSSSVV-MDVVRYEGRRVVLDLDLNF 163

Query: 241 PPP 244
           PPP
Sbjct: 241 PPP 163

[Close]

BLAST of Lsi01G002980 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 68/108 (62.96%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MAPRD---KAVAIKPNVGNV--------KEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLG 60
           MAPR    +++A+    G          KEVHFRGVRKRPWGRYAAEIRDP KK+RVWLG
Sbjct: 1   MAPRQANGRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLG 60

Query: 61  TFDTAEEAARAYDNAAREFRGVKAKTNFPLPSDDQLLNLNNKINSINN 98
           TFDTAEEAARAYD AAREFRG KAKTNFPLP +   +N   + +S  N
Sbjct: 61  TFDTAEEAARAYDTAAREFRGSKAKTNFPLPGESTTVNDGGENDSYVN 108

[Close]

BLAST of Lsi01G002980 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 125.6 bits (314), Expect = 5.7e-29
Identity = 93/231 (40.26%), Postives = 113/231 (48.92%), Query Frame = 0


Query: 18  KEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDNAAREFRGVKAKTNF 77
           KE+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AARAYD AAR+FRGVKAKTNF
Sbjct: 27  KEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86

Query: 78  PLPSDDQLLNLNNKINSINNNQSPSQSSTVESSSREQALMVDSSPLNLNLDHGIGGLATA 137
                            +    SP+QSSTV  S      +   +P +L L  G GG    
Sbjct: 87  ----------------GVIVGSSPTQSSTVVDSPTAARFI---TPPHLELSLGGGGAC-- 146

Query: 138 GPISFPFQRYQIPVIGEVFTRGIPSSNHVLYFDAALRAGMIKSHPHHPHQRLRFDHLREA 197
                   R +IP++  V+           Y++ A    M                    
Sbjct: 147 --------RRKIPLVHPVY-----------YYNMATYPKMTTC----------------- 183

Query: 198 VSDFRREFAGGGVQSDSDSSSVVDMNGQDLKPRGGG-----LDLDLNFPPP 244
                      GVQS+S++SSVVD  G      G G     LDLDLN  PP
Sbjct: 207 -----------GVQSESETSSVVDFEG------GAGKISPPLDLDLNLAPP 183

[Close]

BLAST of Lsi01G002980 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26
Identity = 61/87 (70.11%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 15  GNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDNAAREFRGVKAK 74
           G+VKE+ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AEEAARAYD+AAR  RG KAK
Sbjct: 21  GSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAK 80

Query: 75  TNFPLPSDD-QLLNLN-NKINSINNNQ 100
           TNFP+ S      NL  N+I + N NQ
Sbjct: 81  TNFPIDSSSPPPPNLRFNQIRNQNQNQ 107

The following BLAST results are available for this feature:

BLAST of Lsi01G002980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40477	8.2e-41	47.68	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9LW49	1.4e-40	47.08	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
O80340	6.1e-36	45.96	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9C5I3	5.0e-30	43.62	Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9FE67	1.6e-28	62.96	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of Lsi01G002980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UGN5	6.4e-121	89.96	Ethylene-responsive transcription factor 4-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B0A2	6.4e-121	89.96	ethylene-responsive transcription factor 4-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
Q5S004	1.1e-120	89.96	Ethylene response factor 1 OS=Cucumis sativus OX=3659 GN=ERF1 PE=2 SV=1	[more]
A0A6J1EIT5	1.3e-118	88.05	ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1ILY8	1.1e-115	87.20	ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Lsi01G002980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883348.1	1.2e-126	92.80	ethylene-responsive transcription factor 4-like [Benincasa hispida]	[more]
XP_008439819.1	1.3e-120	89.96	PREDICTED: ethylene-responsive transcription factor 4-like [Cucumis melo] >KAA00...	[more]
NP_001267525.1	2.3e-120	89.96	ethylene-responsive transcription factor 4-like [Cucumis sativus] >AAV66332.1 et...	[more]
KAG6604462.1	1.2e-118	88.40	Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subs...	[more]
XP_023545040.1	2.1e-118	88.40	ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi01G002980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15210.1	4.3e-37	45.96	ethylene responsive element binding factor 4	[more]
AT1G28370.1	3.6e-31	43.62	ERF domain protein 11	[more]
AT5G44210.1	1.1e-29	62.96	erf domain protein 9	[more]
AT1G53170.1	5.7e-29	40.26	ethylene response factor 8	[more]
AT1G50640.1	2.0e-26	70.11	ethylene responsive element binding factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 22..33 score: 60.91 coord: 44..60 score: 75.4
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 21..84 e-value: 1.5E-39 score: 147.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 21..70 e-value: 2.6E-14 score: 53.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 21..78 score: 23.472279
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 21..78 e-value: 1.24583E-31 score: 108.898
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 20..79 e-value: 1.5E-28 score: 100.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..246
None	No IPR available	PANTHER	PTHR31677:SF151	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE	coord: 1..235
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 1..235
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 21..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G002980.1	Lsi01G002980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity